RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHG5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039713

Ensembl transcript IDs: ENSMUST00000084115.4, ENSMUST00000105661.10, ENSMUST00000105662.8, ENSMUST00000118648.8, ENSMUST00000239025.2

Found 477 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTaGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGCA +
Preference number: 1 (lower is better)
Translates to: GGRQVLSAVLRQWYP*GSPWSSHTRGSGEA
Trigger: TGCTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR TCA 90 bp GTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTaGAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCT +
Preference number: 1 (lower is better)
Translates to: VPLGVSLVFTHTRQR*SRCCIPRGQGSLLS
Trigger: AGACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR GCA 90 bp CTGGCGCTCTGGCACACATGCACACATGAGGAGCTGAGAAGCAGGTaGTGTGACTTCTGGGAGGGAGGCAGGTTCTCTCTGCTGTCCTCA +
Preference number: 1 (lower is better)
Translates to: LALWHTCTHEELRSR*CDFWEGGRFSLLSS
Trigger: TGAGGACAGCAGAGAGAACCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCATGTGTGCCAGAGCGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR GCA 90 bp CATGAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATaGACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: HEVMRQPPCLALWHT*THEELRSRCCDFWE
Trigger: CTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR GCA 90 bp CAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTaGAGCCAGGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATC +
Preference number: 1 (lower is better)
Translates to: QEATWARGVCVCVEH*SQGLELHRTLLYSI
Trigger: GATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CCA 90 bp GTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTaGTCTTCACACACACGAGGCAGCGGTGAAGCAGGTGCTGTATCC +
Preference number: 1 (lower is better)
Translates to: VLSAVLRQWYPWGSP*SSHTRGSGEAGAVS
Trigger: GGATACAGCACCTGCTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR TCA 90 bp CGCCTCGGAGGCCAGCATGACCAGGAAGGACAGGGACTCATTTCATaGATCCTAACGAAGGTGGCATTGAGAGCCAGTGAGCCCAGCCCA +
Preference number: 1 (lower is better)
Translates to: RLGGQHDQEGQGLIS*ILTKVALRASEPSP
Trigger: TGGGCTGGGCTCACTGGCTCTCAATGCCACCTTCGTTAGGATTCATGAAATGAGTCCCTGTCCTTCCTGGTCATGCTGGCCTCCGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CCA 90 bp CAAATTGGCCATGAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTaGCACACATGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGAC +
Preference number: 1 (lower is better)
Translates to: QIGHEVMRQPPCLAL*HTCTHEELRSRCCD
Trigger: GTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTCATGGCCAATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR TCA 90 bp CTAGAGTGGGTCGAAAGCTCTGCTTCCCATTCAGCCTCCAGAGGCTaGTCGTCGCAGACATGGCTGTCACTACCCACTACCCATGCCATC +
Preference number: 1 (lower is better)
Translates to: LEWVESSASHSASRG*SSQTWLSLPTTHAI
Trigger: GATGGCATGGGTAGTGGGTAGTGACAGCCATGTCTGCGACGATCAGCCTCTGGAGGCTGAATGGGAAGCAGAGCTTTCGACCCACTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR GCA 90 bp AGGGCTCTCTACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTaGTCACACCTCCCTGCAAGGGGTGGGAAGAAAGTCCATCTTGGC +
Preference number: 1 (lower is better)
Translates to: RALYCLLFSGTLGVS*SHLPARGGKKVHLG
Trigger: GCCAAGATGGACTTTCTTCCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTAGAGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR GCA 90 bp TCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCACCCTaGCTGGCGCTCTGGCACACATGCACACATGAGGAGCTGAGAAGC +
Preference number: 1 (lower is better)
Translates to: SGKVQIGHEVMRQPP*LALWHTCTHEELRS
Trigger: GCTTCTCAGCTCCTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR TCA 90 bp GACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATaGGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATG +
Preference number: 1 (lower is better)
Translates to: DPSLFHPVWQSANWP*GDEATTLPGALAHM
Trigger: CATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR GCA 90 bp TCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTaGAAGGGGTGGGAAGAAAGTCCATCTTGGCTGGTGGCAATCACA +
Preference number: 1 (lower is better)
Translates to: SLIQWHPRGLLLTPP*KGWEESPSWLVAIT
Trigger: TGTGATTGCCACCAGCCAAGATGGACTTTCTTCCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAATAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR TCA 90 bp GGGACTCATTTCATGAATCCTAACGAAGGTGGCATTGAGAGCCAGTaGGCCCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAG +
Preference number: 1 (lower is better)
Translates to: GTHFMNPNEGGIESQ*AQPRKSGLAESRAE
Trigger: CTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGGGCTCACTGGCTCTCAATGCCACCTTCGTTAGGATTCATGAAATGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CCA 90 bp TCACACCTCCCTGCAAGGGGTGGGAAGAAAGTCCATCTTGGCTGGTaGCAATCACAAAATGGTTCTAGCGAAACCCTCACCTCTGCCACA +
Preference number: 1 (lower is better)
Translates to: SHLPARGGKKVHLGW*QSQNGSSETLTSAT
Trigger: TGTGGCAGAGGTGAGGGTTTCGCTAGAACCATTTTGTGATTGCCACCAGCCAAGATGGACTTTCTTCCCACCCCTTGCAGGGAGGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR-3UTR TCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCACACGAGGCAGCGGTaGAGCAGGTGCTGTATCCCC +
Preference number: 2 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTHTRQR*SRCCIP
Trigger: GGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTG...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR CCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCGGCAACCACCCTGCCTaGCGCTCTGGCACACATGCA +
Preference number: 2 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATGNHPA*RSGTHA
Trigger: TGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCC...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR TCA 90 bp AAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCACAGGAGAAGCAGGTGCTGTaGCTTCTGGGAGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: KRGVCVCGALQPGPGTPQEKQVL*LLGGRQ
Trigger: CTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTC...CTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR CCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGCCTTGGGGGTCTCCTTaGTCTTCACACACACGAGGC +
Preference number: 2 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRPWGSP*SSHTRG
Trigger: GCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGG...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CAA 90 bp ACAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATaGCAGCCAGGGCCTGGAACTCCACAGGACCCTTCTCTATTCCAT +
Preference number: 2 (lower is better)
Translates to: TRGHLGKRGVCVCGA*QPGPGTPQDPSLFH
Trigger: ATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR TCA 90 bp TACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTGCATCAGCCTCCAGAGGCTaGTCGTCGCAGACATGGCTG +
Preference number: 2 (lower is better)
Translates to: YCLLFSGTLGVSCSHLPASASRG*SSQTWL
Trigger: CAGCCATGTCTGCGACGATCAGCCTCTGGAGGCTGA...TGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR-3UTR TCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCGCACACATGCACACATaGGGAGCTGAGAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATAHMHT*GAEKQV
Trigger: CACCTGCTTCTCAGCTCCTCATGTGTGCATGTGTGC...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR TCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCACACACGAGGCAGCGGTaGAGCAGGTGCTGTATCCCC +
Preference number: 2 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPHTRQR*SRCCIP
Trigger: GGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTG...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR TCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCACACACGAGGCAGCGGTaGAGCAGGTGCTGTATCCCC +
Preference number: 2 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPHTRQR*SRCCIP
Trigger: GGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTG...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR CCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCACCCTGCCTGGCGCTCTaGCACACATGCACACATGAG +
Preference number: 2 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPPCLAL*HTCTHE
Trigger: CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGG...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR CCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCACCTTGGGGGTCTCCTTaGTCTTCACACACACGAGGC +
Preference number: 2 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPPWGSP*SSHTRG
Trigger: GCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGG...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR CCA 90 bp CAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAAAAGTCCATCTTGGCTaGTGGCAATCACAAAATGGT +
Preference number: 2 (lower is better)
Translates to: QWYPWGSPWSSHTRGSGEKVHLG*WQSQNG
Trigger: ACCATTTTGTGATTGCCACCAGCCAAGATGGACTTT...TTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR-3UTR TCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCAGCACACATGAGGAGCTaGGAAGCAGGTGCTGTGACT +
Preference number: 2 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPAHMRS*EAGAVT
Trigger: AGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGC...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR-3UTR CCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCAAGGTGCTGTGACTTCTaGGAGGGAGGCAGGTTCTCT +
Preference number: 2 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPRCCDF*EGGRFS
Trigger: AGAGAACCTGCCTCCCTCCCAGAAGTCACAGCACCT...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR TCA 72 bp GGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTaGAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCT +
Preference number: 3 (lower is better)
Translates to: GVSLVFTHTRQR*SRCCIPRGQGS
Trigger: AGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR GCA 72 bp CAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTaGAAGGGGTGGGAAGAAAGTCCATCTTGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: QWHPRGLLLTPP*KGWEESPSWLV
Trigger: CACCAGCCAAGATGGACTTTCTTCCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR CCA 72 bp CCTGCTAGATACCCCACGCCCGCCCAGCCACTAGAGTaGGTCGAAAGCTCTGCTTCCCATTCAGCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: PARYPTPAQPLE*VESSASHSASR
Trigger: TCTGGAGGCTGAATGGGAAGCAGAGCTTTCGACCCACTCTAGTGGCTGGGCGGGCGTGGGGTATCTAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR CCA 72 bp GCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTaGTCTTCACACACACGAGGCAGCGGTGAAGCAGGT +
Preference number: 3 (lower is better)
Translates to: AVLRQWYPWGSP*SSHTRGSGEAG
Trigger: ACCTGCTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CCA 72 bp AAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTaGAGCATTGCAGCCAGGGCCTGGAACTCCACAGGA +
Preference number: 3 (lower is better)
Translates to: KRPPGQEGCVCV*SIAARAWNSTG
Trigger: TCCTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR TCA 72 bp CCTGACAGATCCCAGCCCGCGCCTCGGAGGCCAGCATaGCCAGGAAGGACAGGGACTCATTTCATGAATCCT +
Preference number: 3 (lower is better)
Translates to: PDRSQPAPRRPA*PGRTGTHFMNP
Trigger: AGGATTCATGAAATGAGTCCCTGTCCTTCCTGGTCATGCTGGCCTCCGAGGCGCGGGCTGGGATCTGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR GCA 72 bp ATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATaGACACATGAGGAGCTGAGAAGCAGGTGCTGTGAC +
Preference number: 3 (lower is better)
Translates to: MRQPPCLALWHT*THEELRSRCCD
Trigger: GTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CCA 72 bp CAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTaGGGGTCTCCTTGGTCTTCACACACACGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: QVLSAVLRQWYP*GSPWSSHTRGS
Trigger: GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CCA 72 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTaGTACCCTTGGGGGTCTCCTTGGTCTTCACACACA +
Preference number: 3 (lower is better)
Translates to: GGRQVLSAVLRQ*YPWGSPWSSHT
Trigger: TGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CCA 72 bp CATGAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTaGCACACATGCACACATGAGGAGCTGAGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: HEVMRQPPCLAL*HTCTHEELRSR
Trigger: CCTGCTTCTCAGCTCCTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CCA 72 bp GCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTaGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGC +
Preference number: 3 (lower is better)
Translates to: AGRVKSRGQEAT*ARGVCVCVEHC
Trigger: GCAATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR GCA 72 bp ATCGTCGCAGACATGGCTGTCACTACCCACTACCCATaGCATCACAGAATCATCTGTCCCTCCCCTGGCCGG +
Preference number: 3 (lower is better)
Translates to: IVADMAVTTHYP*HHRIICPSPGR
Trigger: CCGGCCAGGGGAGGGACAGATGATTCTGTGATGGCATGGGTAGTGGGTAGTGACAGCCATGTCTGCGACGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR GCA 72 bp GTGCAAATTGGCCATGAGGTGATGAGGCAACCACCCTaGCTGGCGCTCTGGCACACATGCACACATGAGGAG +
Preference number: 3 (lower is better)
Translates to: VQIGHEVMRQPP*LALWHTCTHEE
Trigger: CTCCTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTCATGGCCAATTTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CCA 72 bp CCTAGGGGTCTCCTGCTCACACCTCCCTGCAAGGGGTaGGAAGAAAGTCCATCTTGGCTGGTGGCAATCACA +
Preference number: 3 (lower is better)
Translates to: PRGLLLTPPCKG*EESPSWLVAIT
Trigger: TGTGATTGCCACCAGCCAAGATGGACTTTCTTCCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR TCA 72 bp CTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATaGGGTGATGAGGCAACCACCCTGCCTGGCGCTCTG +
Preference number: 3 (lower is better)
Translates to: LFHPVWQSANWP*GDEATTLPGAL
Trigger: CAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR GCA 72 bp TACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTaGTCACACCTCCCTGCAAGGGGTGGGAAGAAAGTC +
Preference number: 3 (lower is better)
Translates to: YCLLFSGTLGVS*SHLPARGGKKV
Trigger: GACTTTCTTCCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
3UTR TCA 72 bp TTCATGAATCCTAACGAAGGTGGCATTGAGAGCCAGTaGGCCCAGCCCAGAAAATCAGGGCTGGCAGAGTCA +
Preference number: 3 (lower is better)
Translates to: FMNPNEGGIESQ*AQPRKSGLAES
Trigger: TGACTCTGCCAGCCCTGATTTTCTGGGCTGGGCTCACTGGCTCTCAATGCCACCTTCGTTAGGATTCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR TCA 72 bp CTTTATAGAATAGCCAAACTTAATAAATACGCAGCCTaGCAGATCCCAGCCCGCGCCTCGGAGGCCAGCATG +
Preference number: 3 (lower is better)
Translates to: LYRIAKLNKYAA*QIPARASEASM
Trigger: CATGCTGGCCTCCGAGGCGCGGGCTGGGATCTGTCAGGCTGCGTATTTATTAAGTTTGGCTATTCTATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACGCTCAGAGCTGGGCCTaGCTGCTGCTCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNAQSWA*LLLGAR
Trigger: CCGGGCGCCGAGCAGCAGCCAGGCCCAGCTCTGAGC...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
CDS-3UTR TCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGGGAGAGGGGGTCTaGGGCACAGGCGCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPWGEGV*GTGAGS
Trigger: CGAGCCAGCGCCTGTGCCTCAGACCCCCTCTCCCCA...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACCTCCCTGCTCCACCTTaGCCTCGTCCCCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNLPAPP*PRPPAW
Trigger: CCAAGCCGGGGGACGAGGGCAAGGTGGAGCAGGGAG...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTAGGCGCTGCCGCTCCTaGCGCTGCCGCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTRRCRS*RCRMHV
Trigger: CACGTGCATGCGGCAGCGGCAGGAGCGGCAGCGCCT...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCGCAGCTGGACAGGAGTaGGACGGCGGAGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVAAGQE*DGGGGV
Trigger: CACCCCGCCTCCGCCGTCGCACTCCTGTCCAGCTGC...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTGGTCTGCAGCAGGGCTaGTGCGGGGAGGACAGGACC +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSGLQQG*CGEDRT
Trigger: GGTCCTGTCCTCCCCGCACCAGCCCTGCTGCAGACC...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTGGTCTGCAGCAGGGCTaGTGCGGGGAGGACAGGACC +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPGLQQG*CGEDRT
Trigger: GGTCCTGTCCTCCCCGCACCAGCCCTGCTGCAGACC...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCAGCCGCTGGCACTGCTaGTGCTTCTCCGCCCACGTG +
Preference number: 4 (lower is better)
Translates to: GREAGSLCCPQAVVPLGVSRWHC*CFSAHV
Trigger: CACGTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCT...GACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAATGGGGAGAGGGGGTCTaGGGCACAGGCGCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: QWYPWGSPWSSHTRGSGEWGEGV*GTGAGS
Trigger: CGAGCCAGCGCCTGTGCCTCAGACCCCCTCTCCCCA...TTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGTGGGGAGAGGGGGTCTaGGGCACAGGCGCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: PRKSGLAESRAEDKRPPGWGEGV*GTGAGS
Trigger: CGAGCCAGCGCCTGTGCCTCAGACCCCCTCTCCCCA...CCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCAGAGGCCCCCGGTGGTaGAGCTGCTGGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: WARGVCVCVEHCSQGLELRGPRW*SCWQSA
Trigger: TGCCGACTGCCAGCAGCTGCACCACCGGGGGCCTCT...GAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGCTCCCTGCTCCACCTTaGCCTCGTCCCCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EVMRQPPCLALWHTCTHELPAPP*PRPPAW
Trigger: CCAAGCCGGGGGACGAGGGCAAGGTGGAGCAGGGAG...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCACAGAGGCGCTGCCGCTCCTaGCGCTGCCGCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: KRGVCVCGALQPGPGTPQRRCRS*RCRMHV
Trigger: CACGTGCATGCGGCAGCGGCAGGAGCGGCAGCGCCT...CTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCAGCTGGACAGGAGTaGGACGGCGGAGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEAAAGQE*DGGGGV
Trigger: CACCCCGCCTCCGCCGTCGCACTCCTGTCCAGCTGC...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACAGCTCAGAGCTGGGCCTaGCTGCTGCTCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTAQSWA*LLLGAR
Trigger: CCGGGCGCCGAGCAGCAGCCAGGCCCAGCTCTGAGC...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
CDS-3UTR CCA 90 bp CCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCTGACAGGCTGCGGCTaGGAGCCGGAGGCACGCCAC +
Preference number: 4 (lower is better)
Translates to: PRKSGLAESRAEDKRPPGLTGCG*EPEARH
Trigger: GTGGCGTGCCTCCGGCTCCCAGCCGCAGCCTGTCAG...CCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTGATCAGGCACAGTTCTaGCAGGCTGCGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSDQAQF*QAAAGS
Trigger: GCTCCCAGCCGCAGCCTGTCAGAACTGTGCCTGATC...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTGCTGGCAGTCGGCATaGTGGCATACCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNCWQSA*WHTLAA
Trigger: GGCCGCCAAGGTATGCCATCATGCCGACTGCCAGCA...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTTCCAGGCTCTGCAGATaGTGGCTGCCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSSRLCR*WLPGCS
Trigger: GGAGCACCCAGGCAGCCAGCATCTGCAGAGCCTGGA...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCAGGCTCTGCAGATaGTGGCTGCCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNSRLCR*WLPGCS
Trigger: GGAGCACCCAGGCAGCCAGCATCTGCAGAGCCTGGA...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTCCAGGCTCTGCAGATaGTGGCTGCCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPSRLCR*WLPGCS
Trigger: GGAGCACCCAGGCAGCCAGCATCTGCAGAGCCTGGA...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGAGGGTAGCTCAGAGCTaGGCCTGGCTGCTGCTCGGC +
Preference number: 4 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWRVAQS*AWLLLG
Trigger: GCCGAGCAGCAGCCAGGCCCAGCTCTGAGCTACCCT...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
CDS-3UTR CCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCAGGGTAGCTCAGAGCTaGGCCTGGCTGCTGCTCGGC +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVRVAQS*AWLLLG
Trigger: GCCGAGCAGCAGCCAGGCCCAGCTCTGAGCTACCCT...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
CDS-3UTR CCA 90 bp GGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTTTGAGAGGCCCCCGGTaGTGCAGCTGCTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GRFSLLSSGSGTLGGLLGLRGPR*CSCWQS
Trigger: CGACTGCCAGCAGCTGCACCACCGGGGGCCTCTCAA...ACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCAGCCGCTGGCACTGCTaGTGCTTCTCCGCCCACGTG +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVSRWHC*CFSAHV
Trigger: CACGTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCT...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTTGGTGAGCCGCTGGTaGGGCTTGGCCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: GREAGSLCCPQAVVPLGVLVSRW*GLASMS
Trigger: TGACATGCTGGCCAAGCCCCACCAGCGGCTCACCAA...GACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCCAGATGCTGGCTGCCTaGGTGCTCCTGTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: GREAGSLCCPQAVVPLGVQMLAA*VLLCTE
Trigger: CTCAGTGCACAGGAGCACCCAGGCAGCCAGCATCTG...GACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTGGATGGTGGGGGAGCTaGCAGCTGAGGTACCGCTCT +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPGWWGS*QLRYRS
Trigger: AGAGCGGTACCTCAGCTGCCAGCTCCCCCACCATCC...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACTGACAGGCTGCGGCTaGGAGCCGGAGGCACGCCAC +
Preference number: 4 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTLTGCG*EPEARH
Trigger: GTGGCGTGCCTCCGGCTCCCAGCCGCAGCCTGTCAG...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCAAGCTGACAGGCTGCGGCTaGGAGCCGGAGGCACGCCAC +
Preference number: 4 (lower is better)
Translates to: ENQGWQSQEQRTRGHLGKLTGCG*EPEARH
Trigger: GTGGCGTGCCTCCGGCTCCCAGCCGCAGCCTGTCAG...CTTGCCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GGGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCTCATGCCCATCAGTaGGCTCCCTCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GREAGSLCCPQAVVPLGVSHAHQ*APSSCP
Trigger: AGGACAGCTGGAGGGAGCTCACTGATGGGCATGAGA...GACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGCTCCGTGGAGCCATCTaGGGTGCAGTGCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRLRGAI*GAVLRV
Trigger: GACTCTGAGCACTGCACCTCAGATGGCTCCACGGAG...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTTCTTCCTCCAGGTCTaGAGCAGGGCTGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVFFLQV*SRAGAG
Trigger: CCCCGCACCAGCCCTGCTGCAGACCTGGAGGAAGAA...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCATTCAGACATGTTCTTaGGACGGCGGCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GREAGSLCCPQAVVPLGVIQTCS*DGGQGP
Trigger: TGGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAAT...GACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTTGCTGGTACCCCCACTaGTGCCAACGGGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSCWYPH*CQRAEN
Trigger: GTTCTCTGCCCGTTGGCAGCAGTGGGGGTACCAGCA...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACGCTGAAGCGACTGGCTaGCCGGTTCTTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNAEATG*PVLPAL
Trigger: GAGAGCTGGAAGAACCGGGCAGCCAGTCGCTTCAGC...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCTGGCACCATCACGCTaGCCCACAAGCCGCGGTGTA +
Preference number: 4 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTLAPSR*PTSRGV
Trigger: TACACCGCGGCTTGTGGGGCAGCGTGATGGTGCCAG...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGCTGGCACCATCACGCTaGCCCACAAGCCGCGGTGTA +
Preference number: 4 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWLAPSR*PTSRGV
Trigger: TACACCGCGGCTTGTGGGGCAGCGTGATGGTGCCAG...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGCTGGCACCATCACGCTaGCCCACAAGCCGCGGTGTA +
Preference number: 4 (lower is better)
Translates to: EVMRQPPCLALWHTCTHELAPSR*PTSRGV
Trigger: TACACCGCGGCTTGTGGGGCAGCGTGATGGTGCCAG...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTTTCAGCCGCTGGCACTaGTGGTGCTTCTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: GRFSLLSSGSGTLGGLLGFSRWH*WCFSAH
Trigger: GTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCTGAA...ACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTTCAGCCGCTGGCACTaGTGGTGCTTCTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVFSRWH*WCFSAH
Trigger: GTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCTGAA...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGCCTGGGTGCTCCTGTaGACTGAGCTGTGCACGCAG +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSAWVLL*TELCTQ
Trigger: CTGCGTGCACAGCTCAGTGCACAGGAGCACCCAGGC...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CACACACACGAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTGCTGGCTGCCTGGGTaGTCCTGTGCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HTHEAAVKQVLYPQRTGLCWLPG*SCALSC
Trigger: ACAGCTCAGTGCACAGGAGCACCCAGGCAGCCAGCA...GAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGCTGGCTGCCTGGGTaGTCCTGTGCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPCWLPG*SCALSC
Trigger: ACAGCTCAGTGCACAGGAGCACCCAGGCAGCCAGCA...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTAAGTGGGGGACAGGGTaGCATAGGCGGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPKWGTG*HRRSPW
Trigger: CCATGGACTCCGCCTATGGCACCCTGTCCCCCACTT...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTACAGTTCTGACAGGCTaGGGCTGGGAGCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTTVLTG*GWEPEA
Trigger: TGCCTCCGGCTCCCAGCCGCAGCCTGTCAGAACTGT...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACGAGGACAGGACCGGGTaGAAACATTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNEDRTG*KHSGPG
Trigger: TCCTGGCCCGGAATGTTTCCACCCGGTCCTGTCCTC...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CACACACACGAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCGAGGACAGGACCGGGTaGAAACATTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HTHEAAVKQVLYPQRTGLEDRTG*KHSGPG
Trigger: TCCTGGCCCGGAATGTTTCCACCCGGTCCTGTCCTC...GAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTGAGGACAGGACCGGGTaGAAACATTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSEDRTG*KHSGPG
Trigger: TCCTGGCCCGGAATGTTTCCACCCGGTCCTGTCCTC...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TTATTCAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTGCAAGGGGTGGGCACACTGCCTCCTGTTaGTGGCACTGCCGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LFSGTLGVSCSHLPARGGHTASC*WHCRLV
Trigger: GACCAGGCGGCAGTGCCACCAACAGGAGGCAGTGTG...CCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR CCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCCGCCTTCTCCAGCACTaGCACCATCACGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVRLLQH*HHHAAP
Trigger: TGGGGCAGCGTGATGGTGCCAGTGCTGGAGAAGGCG...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCGCCTTCTCCAGCACTaGCACCATCACGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTRLLQH*HHHAAP
Trigger: TGGGGCAGCGTGATGGTGCCAGTGCTGGAGAAGGCG...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGCGCCTTCTCCAGCACTaGCACCATCACGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: EVMRQPPCLALWHTCTHERLLQH*HHHAAP
Trigger: TGGGGCAGCGTGATGGTGCCAGTGCTGGAGAAGGCG...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGAGCCGCTGGCACTGCTaGTGCTTCTCCGCCCACGTG +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRSRWHC*CFSAHV
Trigger: CACGTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCT...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGCCGCTGGTGGGGCTTaGCCAGCATGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSAAGGA*PACHSA
Trigger: AGCTGAGTGACATGCTGGCCAAGCCCCACCAGCGGC...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGCTCCGGCACAAGGCCTaGCTGCTGGCCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWLRHKA*LLAWKV
Trigger: CACTTTCCAGGCCAGCAGCCAGGCCTTGTGCCGGAG...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACAGGCTCTGCAGATGCTaGCTGCCTGGGTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNRLCRC*LPGCSC
Trigger: ACAGGAGCACCCAGGCAGCCAGCATCTGCAGAGCCT...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGAGGCTCTGCAGATGCTaGCTGCCTGGGTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRRLCRC*LPGCSC
Trigger: ACAGGAGCACCCAGGCAGCCAGCATCTGCAGAGCCT...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGGGATGGTGGGGGAGCTaGCAGCTGAGGTACCGCTCT +
Preference number: 4 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWGWWGS*QLRYRS
Trigger: AGAGCGGTACCTCAGCTGCCAGCTCCCCCACCATCC...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCATAGGCGGAGTCCATaGAGCAGGAGCGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSHRRSP*SRSGHP
Trigger: TGGATGGCCGCTCCTGCTCCATGGACTCCGCCTATG...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTGGGGTCACACATCCCTaGACCATTCCAGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSGVTHP*TIPART
Trigger: GGTCCTGGCTGGAATGGTCCAGGGATGTGTGACCCC...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACGGGGTCACACATCCCTaGACCATTCCAGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNGVTHP*TIPART
Trigger: GGTCCTGGCTGGAATGGTCCAGGGATGTGTGACCCC...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TTATTCAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTGCAAGGGGTGGGTGTAGGCCTCGAAGGTaGGGGACAGGGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LFSGTLGVSCSHLPARGGCRPRR*GTGVCW
Trigger: CCAACACACCCCTGTCCCTCACCTTCGAGGCCTACA...CCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR TCA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGTGTAGGCCTCGAAGGTaGGGGACAGGGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: EVMRQPPCLALWHTCTHECRPRR*GTGVCW
Trigger: CCAACACACCCCTGTCCCTCACCTTCGAGGCCTACA...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGCTCCAGCCTCAGGCCTaGACTCTCTTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRLQPQA*TLFILL
Trigger: GAGGAGGATGAAGAGAGTTCAGGCCTGAGGCTGGAG...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTCTCCAGCCTCAGGCCTaGACTCTCTTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPLQPQA*TLFILL
Trigger: GAGGAGGATGAAGAGAGTTCAGGCCTGAGGCTGGAG...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCTCCGTGGAGCCATCTaGGGTGCAGTGCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: WARGVCVCVEHCSQGLELLRGAI*GAVLRV
Trigger: GACTCTGAGCACTGCACCTCAGATGGCTCCACGGAG...GAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CACACACACGAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCGCTCGCTGGTGGGAGTaGCAGAGGAAGCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: HTHEAAVKQVLYPQRTGLARWWE*QRKQCY
Trigger: GTAACACTGCTTCCTCTGTCACTCCCACCAGCGAGC...GAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACGCTCGCTGGTGGGAGTaGCAGAGGAAGCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNARWWE*QRKQCY
Trigger: GTAACACTGCTTCCTCTGTCACTCCCACCAGCGAGC...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACGGAGCCACAAAGTCTTaGAGGGAAGTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNGATKS*REVGDR
Trigger: CCTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCC...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGGATCAGGCACAGTTCTaGCAGGCTGCGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRDQAQF*QAAAGS
Trigger: GCTCCCAGCCGCAGCCTGTCAGAACTGTGCCTGATC...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp AAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCACAGGATCAGGCACAGTTCTaGCAGGCTGCGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KRGVCVCGALQPGPGTPQDQAQF*QAAAGS
Trigger: GCTCCCAGCCGCAGCCTGTCAGAACTGTGCCTGATC...CTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp AAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCACAGTGCTGGCAGTCGGCATaGTGGCATACCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: KRGVCVCGALQPGPGTPQCWQSA*WHTLAA
Trigger: GGCCGCCAAGGTATGCCATCATGCCGACTGCCAGCA...CTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAGAGGCCCCCGGTGGTaGAGCTGCTGGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSARGPRW*SCWQSA
Trigger: TGCCGACTGCCAGCAGCTGCACCACCGGGGGCCTCT...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCACAGTTCTTCCTCCAGGTCTaGAGCAGGGCTGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: KRGVCVCGALQPGPGTPQFFLQV*SRAGAG
Trigger: CCCCGCACCAGCCCTGCTGCAGACCTGGAGGAAGAA...CTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCTTACTCCCTGCTCCACCTTaGCCTCGTCCCCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SGEAGAVSPEDRALYCLLLPAPP*PRPPAW
Trigger: CCAAGCCGGGGGACGAGGGCAAGGTGGAGCAGGGAG...TAAGAGACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGGAATCCTTCACTCCCTaGTCCACCTTGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRESFTP*STLPSS
Trigger: GGACGAGGGCAAGGTGGAGCAGGGAGTGAAGGATTC...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTGAATCCTTCACTCCCTaGTCCACCTTGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPESFTP*STLPSS
Trigger: GGACGAGGGCAAGGTGGAGCAGGGAGTGAAGGATTC...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACATTCAGACATGTTCTTaGGACGGCGGCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNIQTCS*DGGQGP
Trigger: TGGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAAT...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTTGCTGGTACCCCCACTaGTGCCAACGGGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTCWYPH*CQRAEN
Trigger: GTTCTCTGCCCGTTGGCAGCAGTGGGGGTACCAGCA...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTCCTGTTGGTGGCACTaGCGCCTGGTCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRSCWWH*RLVSFS
Trigger: TGAGAAGCTGACCAGGCGGCAGTGCCACCAACAGGA...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCCTGGCACCATCACGCTaGCCCACAAGCCGCGGTGTA +
Preference number: 4 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATLAPSR*PTSRGV
Trigger: TACACCGCGGCTTGTGGGGCAGCGTGATGGTGCCAG...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGTTCAGCCGCTGGCACTaGTGGTGCTTCTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: SGTLGGLLGLHTHEAAVKFSRWH*WCFSAH
Trigger: GTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCTGAA...CTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTTCAGCCGCTGGCACTaGTGGTGCTTCTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATFSRWH*WCFSAH
Trigger: GTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCTGAA...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTATCCACCTCGTCGTTaGTGCCCTCCACAACCTCGT +
Preference number: 4 (lower is better)
Translates to: GREAGSLCCPQAVVPLGVYPPRR*CPPQPR
Trigger: ACGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATA...GACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCAGCTGTGCACGCAGCTaGTGCAGCTGGTTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVSCARS*CSWFCA
Trigger: CGCACAGAACCAGCTGCAGCAGCTGCGTGCACAGCT...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTGTGCACTGAGCTGTaGACGCAGCTGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRFSLLSSGSGTLGGLLGLCTEL*TQLLQL
Trigger: CAGCTGCAGCAGCTGCGTGCACAGCTCAGTGCACAG...ACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGCTGTGCACTGAGCTGTaGACGCAGCTGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWLCTEL*TQLLQL
Trigger: CAGCTGCAGCAGCTGCGTGCACAGCTCAGTGCACAG...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGGCCTGGGTGCTCCTGTaGACTGAGCTGTGCACGCAG +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRAWVLL*TELCTQ
Trigger: CTGCGTGCACAGCTCAGTGCACAGGAGCACCCAGGC...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTGCTGGCTGCCTGGGTaGTCCTGTGCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWCWLPG*SCALSC
Trigger: ACAGCTCAGTGCACAGGAGCACCCAGGCAGCCAGCA...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCCTCTTCCAGGCTCTaGAGATGCTGGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVSSSRL*RCWLPG
Trigger: CCCAGGCAGCCAGCATCTGCAGAGCCTGGAAGAGGA...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGTCCTCTTCCAGGCTCTaGAGATGCTGGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EVMRQPPCLALWHTCTHESSSRL*RCWLPG
Trigger: CCCAGGCAGCCAGCATCTGCAGAGCCTGGAAGAGGA...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACGAGGGAGGCTCAGACTaGACCCTGGACATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNEGGSD*TLDIVP
Trigger: TGGGACTATGTCCAGGGTGCAGTCTGAGCCTCCCTC...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GCAGAGGACAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTCACACTGCCTCCTGTTaGTGGCACTGCCGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: AEDKRPPGQEGCVCVWSIHTASC*WHCRLV
Trigger: GACCAGGCGGCAGTGCCACCAACAGGAGGCAGTGTG...AATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CGCCCAGCCACTAGAGTGGGTCGAAAGCTCTGCTTCCCATTCAGCCTCCAGAGGCTCAGCTTCAGCCGCTaGCACTGCTGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RPATRVGRKLCFPFSLQRLSFSR*HCWCFS
Trigger: GGAGAAGCACCAGCAGTGCCAGCGGCTGAAGCTGAG...CCTCTGGAGGCTGAATGGGAAGCAGAGCTTTCGACCCACTCTAGTGGCTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR CCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCCTCAGCTTCAGCCGCTaGCACTGCTGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSLSFSR*HCWCFS
Trigger: GGAGAAGCACCAGCAGTGCCAGCGGCTGAAGCTGAG...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGGCCGCTGGTGGGGCTTaGCCAGCATGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRAAGGA*PACHSA
Trigger: AGCTGAGTGACATGCTGGCCAAGCCCCACCAGCGGC...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCACTCCGGCACAAGGCCTaGCTGCTGGCCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEALRHKA*LLAWKV
Trigger: CACTTTCCAGGCCAGCAGCCAGGCCTTGTGCCGGAG...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGCTCCGGCACAAGGCCTaGCTGCTGGCCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRLRHKA*LLAWKV
Trigger: CACTTTCCAGGCCAGCAGCCAGGCCTTGTGCCGGAG...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGCAGATGCTGGCTGCCTaGGTGCTCCTGTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: EVMRQPPCLALWHTCTHEQMLAA*VLLCTE
Trigger: CTCAGTGCACAGGAGCACCCAGGCAGCCAGCATCTG...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCAGATGCTGGCTGCCTaGGTGCTCCTGTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: WARGVCVCVEHCSQGLELQMLAA*VLLCTE
Trigger: CTCAGTGCACAGGAGCACCCAGGCAGCCAGCATCTG...GAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCAGGCTCTGCAGATGCTaGCTGCCTGGGTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSRLCRC*LPGCSC
Trigger: ACAGGAGCACCCAGGCAGCCAGCATCTGCAGAGCCT...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGGGATGGTGGGGGAGCTaGCAGCTGAGGTACCGCTCT +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRGWWGS*QLRYRS
Trigger: AGAGCGGTACCTCAGCTGCCAGCTCCCCCACCATCC...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GCAGAGGACAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGGATGGTGGGGGAGCTaGCAGCTGAGGTACCGCTCT +
Preference number: 4 (lower is better)
Translates to: AEDKRPPGQEGCVCVWSIGWWGS*QLRYRS
Trigger: AGAGCGGTACCTCAGCTGCCAGCTCCCCCACCATCC...AATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGTCCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCTGGCCAGGGTCTCCGTaGAGCCATCTGAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: WARGVCVCVEHCSQGLELWPGSP*SHLRCS
Trigger: ACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCA...GAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCGCTCTACCACAACCATaGCCAGGGTCTCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: WARGVCVCVEHCSQGLELALPQP*PGSPWS
Trigger: GCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGC...GAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGCATAGGCGGAGTCCATaGAGCAGGAGCGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: EVMRQPPCLALWHTCTHEHRRSP*SRSGHP
Trigger: TGGATGGCCGCTCCTGCTCCATGGACTCCGCCTATG...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCATAGGCGGAGTCCATaGAGCAGGAGCGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: WARGVCVCVEHCSQGLELHRRSP*SRSGHP
Trigger: TGGATGGCCGCTCCTGCTCCATGGACTCCGCCTATG...GAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAACTGACAGGCTGCGGCTaGGAGCCGGAGGCACGCCAC +
Preference number: 4 (lower is better)
Translates to: GLELHRTLLYSIQSGKVQLTGCG*EPEARH
Trigger: GTGGCGTGCCTCCGGCTCCCAGCCGCAGCCTGTCAG...TTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGGGTCACACATCCCTaGACCATTCCAGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSGVTHP*TIPART
Trigger: GGTCCTGGCTGGAATGGTCCAGGGATGTGTGACCCC...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCATGTAGGCCTCGAAGGTaGGGGACAGGGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEACRPRR*GTGVCW
Trigger: CCAACACACCCCTGTCCCTCACCTTCGAGGCCTACA...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCAGGGCTGGCAGACTaGGGGACTTGGAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNSGLAD*GTWNPS
Trigger: TGAAGGATTCCAAGTCCCTCAGTCTGCCAGCCCTGA...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCCTCCAGCCTCAGGCCTaGACTCTCTTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSLQPQA*TLFILL
Trigger: GAGGAGGATGAAGAGAGTTCAGGCCTGAGGCTGGAG...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTTCTCATGCCCATCAGTaGGCTCCCTCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTSHAHQ*APSSCP
Trigger: AGGACAGCTGGAGGGAGCTCACTGATGGGCATGAGA...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGGCTCGCTGGTGGGAGTaGCAGAGGAAGCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: EVMRQPPCLALWHTCTHEARWWE*QRKQCY
Trigger: GTAACACTGCTTCCTCTGTCACTCCCACCAGCGAGC...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTGGAGCCACAAAGTCTTaGAGGGAAGTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GRFSLLSSGSGTLGGLLGGATKS*REVGDR
Trigger: CCTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCC...ACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGTTCTTCCTCCAGGTCTaGAGCAGGGCTGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLFFLQV*SRAGAG
Trigger: CCCCGCACCAGCCCTGCTGCAGACCTGGAGGAAGAA...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGATTCAGACATGTTCTTaGGACGGCGGCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWIQTCS*DGGQGP
Trigger: TGGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAAT...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTATTCAGACATGTTCTTaGGACGGCGGCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GRFSLLSSGSGTLGGLLGIQTCS*DGGQGP
Trigger: TGGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAAT...ACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGCTGGTCAGCTTCTCATaGCCATCAGTGAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRLVSFS*PSVSSL
Trigger: GAGGGAGCTCACTGATGGGCATGAGAAGCTGACCAG...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTTCCTGTTGGTGGCACTaGCGCCTGGTCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTSCWWH*RLVSFS
Trigger: TGAGAAGCTGACCAGGCGGCAGTGCCACCAACAGGA...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTTATCCACCTCGTCGTTaGTGCCCTCCACAACCTCGT +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSYPPRR*CPPQPR
Trigger: ACGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATA...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAAGCTGTGCACGCAGCTaGTGCAGCTGGTTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEASCARS*CSWFCA
Trigger: CGCACAGAACCAGCTGCAGCAGCTGCGTGCACAGCT...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGAGCTGTGCACGCAGCTaGTGCAGCTGGTTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: SGTLGGLLGLHTHEAAVKSCARS*CSWFCA
Trigger: CGCACAGAACCAGCTGCAGCAGCTGCGTGCACAGCT...CTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCCTGTGCACTGAGCTGTaGACGCAGCTGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATLCTEL*TQLLQL
Trigger: CAGCTGCAGCAGCTGCGTGCACAGCTCAGTGCACAG...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACAGCCTGGGTGCTCCTGTaGACTGAGCTGTGCACGCAG +
Preference number: 4 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTAWVLL*TELCTQ
Trigger: CTGCGTGCACAGCTCAGTGCACAGGAGCACCCAGGC...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGCCTGGGTGCTCCTGTaGACTGAGCTGTGCACGCAG +
Preference number: 4 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLAWVLL*TELCTQ
Trigger: CTGCGTGCACAGCTCAGTGCACAGGAGCACCCAGGC...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGCTGGCTGCCTGGGTaGTCCTGTGCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATCWLPG*SCALSC
Trigger: ACAGCTCAGTGCACAGGAGCACCCAGGCAGCCAGCA...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGTCCAGGCTCTGCAGATaGTGGCTGCCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLSRLCR*WLPGCS
Trigger: GGAGCACCCAGGCAGCCAGCATCTGCAGAGCCTGGA...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTCCTCTTCCAGGCTCTaGAGATGCTGGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATSSSRL*RCWLPG
Trigger: CCCAGGCAGCCAGCATCTGCAGAGCCTGGAAGAGGA...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGTCCTCTTCCAGGCTCTaGAGATGCTGGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRSSSRL*RCWLPG
Trigger: CCCAGGCAGCCAGCATCTGCAGAGCCTGGAAGAGGA...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCAAGTGGGGGACAGGGTaGCATAGGCGGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATKWGTG*HRRSPW
Trigger: CCATGGACTCCGCCTATGGCACCCTGTCCCCCACTT...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGGAGGGAGGCTCAGACTaGACCCTGGACATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: EVMRQPPCLALWHTCTHEEGGSD*TLDIVP
Trigger: TGGGACTATGTCCAGGGTGCAGTCTGAGCCTCCCTC...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGAGGACAGGGCTCTCTACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGCCCGGCCCTTGTCCATaGAGGCTGGGTTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGQGSLLSLIQWHPRGLLPGPCP*RLGSGS
Trigger: GCTGCCAGAACCCAGCCTGCATGGACAAGGGCCGGG...CAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTAGAGAGCCCTGTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGGAGGACAGGACCGGGTaGAAACATTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGTLGGLLGLHTHEAAVKEDRTG*KHSGPG
Trigger: TCCTGGCCCGGAATGTTTCCACCCGGTCCTGTCCTC...CTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCACTCAGCTTCAGCCGCTaGCACTGCTGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEALSFSR*HCWCFS
Trigger: GGAGAAGCACCAGCAGTGCCAGCGGCTGAAGCTGAG...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GCAGAGGACAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTCTCAGCTTCAGCCGCTaGCACTGCTGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AEDKRPPGQEGCVCVWSILSFSR*HCWCFS
Trigger: GGAGAAGCACCAGCAGTGCCAGCGGCTGAAGCTGAG...AATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGTTGGTGAGCCGCTGGTaGGGCTTGGCCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRLVSRW*GLASMS
Trigger: TGACATGCTGGCCAAGCCCCACCAGCGGCTCACCAA...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCATTGGTGAGCCGCTGGTaGGGCTTGGCCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEALVSRW*GLASMS
Trigger: TGACATGCTGGCCAAGCCCCACCAGCGGCTCACCAA...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTTATTTGGTGAGCCGCTaGTGGGGCTTGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTYLVSR*WGLASM
Trigger: CATGCTGGCCAAGCCCCACCAGCGGCTCACCAAATA...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGACAAGGCCTGGCTGCTaGCCTGGAAAGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRTRPGC*PGKCRP
Trigger: GGGCCTACACTTTCCAGGCCAGCAGCCAGGCCTTGT...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GCAGAGGACAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTACAAGGCCTGGCTGCTaGCCTGGAAAGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: AEDKRPPGQEGCVCVWSITRPGC*PGKCRP
Trigger: GGGCCTACACTTTCCAGGCCAGCAGCCAGGCCTTGT...AATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAACATAGGCGGAGTCCATaGAGCAGGAGCGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: QWYPWGSPWSSHTRGSGEHRRSP*SRSGHP
Trigger: TGGATGGCCGCTCCTGCTCCATGGACTCCGCCTATG...TTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
3UTR CAA 72 bp GCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTaGGGGGTCTCCTTGGTCTTCACACACACGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGSLCCPQAVVP*GVSLVFTHTRQ
Trigger: CTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCAGGGCTGGCAGACTaGGGGACTTGGAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWSGLAD*GTWNPS
Trigger: TGAAGGATTCCAAGTCCCTCAGTCTGCCAGCCCTGA...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACTCCGTGGAGCCATCTaGGGTGCAGTGCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTLRGAI*GAVLRV
Trigger: GACTCTGAGCACTGCACCTCAGATGGCTCCACGGAG...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp AGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGGGAGCCACAAAGTCTTaGAGGGAAGTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SGTLGGLLGLHTHEAAVKGATKS*REVGDR
Trigger: CCTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCC...CTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTCGTCGTAGTGCAGGGTaGTGTGGAACTTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPRRSAG*CGTCYH
Trigger: GTGATAGCAAGTTCCACAGCACCCTGCACTACGACG...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCTTATTCTTCCTCCAGGTCTaGAGCAGGGCTGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SGEAGAVSPEDRALYCLLFFLQV*SRAGAG
Trigger: CCCCGCACCAGCCCTGCTGCAGACCTGGAGGAAGAA...TAAGAGACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTGTGTCCAGGGATGCCTaGCTCTCCCAGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: GRFSLLSSGSGTLGGLLGVSRDA*LSQEFR
Trigger: TCTGAATTCCTGGGAGAGGCAGGCATCCCTGGACAC...ACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp ATTCAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTGCAAGGGGTGGGAACGCGCATGTACTCCATaGAGCCCTCCTCTTCCATAC +
Preference number: 4 (lower is better)
Translates to: IQWHPRGLLLTPPCKGWERACTP*SPPLPY
Trigger: GTATGGAAGAGGAGGGCTGCATGGAGTACATGCGCG...TTCCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR GCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCAGCAGCTGGACAGGAGTaGGACGGCGGAGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPAAGQE*DGGGGV
Trigger: CACCCCGCCTCCGCCGTCGCACTCCTGTCCAGCTGC...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTGCAACAGTTCTGACAGGCTaGGGCTGGGAGCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: YCLLFSGTLGVSCSHLPATVLTG*GWEPEA
Trigger: TGCCTCCGGCTCCCAGCCGCAGCCTGTCAGAACTGT...TGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR GCA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAACAGTTCTGACAGGCTaGGGCTGGGAGCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSATVLTG*GWEPEA
Trigger: TGCCTCCGGCTCCCAGCCGCAGCCTGTCAGAACTGT...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCCAGTCCCTTCTCCTCTaGAGGGCTCTGGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSQSLLL*RALVFH
Trigger: ATGGAAGACCAGAGCCCTGCAGAGGAGAAGGGACTG...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCACGCCTTCTCCAGCACTaGCACCATCACGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSARLLQH*HHHAAP
Trigger: TGGGGCAGCGTGATGGTGCCAGTGCTGGAGAAGGCG...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AGAGGACAGGGCTCTCTACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGGCCGCTGGTGGGGCTTaGCCAGCATGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGQGSLLSLIQWHPRGLLAAGGA*PACHSA
Trigger: AGCTGAGTGACATGCTGGCCAAGCCCCACCAGCGGC...CAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTAGAGAGCCCTGTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGTATTTGGTGAGCCGCTaGTGGGGCTTGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: SGTLGGLLGLHTHEAAVKYLVSR*WGLASM
Trigger: CATGCTGGCCAAGCCCCACCAGCGGCTCACCAAATA...CTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACAGATGCTGGCTGCCTaGGTGCTCCTGTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTQMLAA*VLLCTE
Trigger: CTCAGTGCACAGGAGCACCCAGGCAGCCAGCATCTG...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCACAGTGCTCTTTCGAAGGATaGTGGGGGAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KRGVCVCGALQPGPGTPQCSFEG*WGSWQL
Trigger: CAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCA...CTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TTATTCAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTGCAAGGGGTGGGAGTCTTGAAGGGAAGTaGGGGACAGGGTGCCATAGG +
Preference number: 4 (lower is better)
Translates to: LFSGTLGVSCSHLPARGGSLEGK*GTGCHR
Trigger: CCTATGGCACCCTGTCCCCCACTTCCCTTCAAGACT...CCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR CCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCAGTCTTGAAGGGAAGTaGGGGACAGGGTGCCATAGG +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVSLEGK*GTGCHR
Trigger: CCTATGGCACCCTGTCCCCCACTTCCCTTCAAGACT...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCAGTCTTGAAGGGAAGTaGGGGACAGGGTGCCATAGG +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSSLEGK*GTGCHR
Trigger: CCTATGGCACCCTGTCCCCCACTTCCCTTCAAGACT...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACAATGCAGGCTGGGTTCTaGCAGCGCAGTCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTMQAGF*QRSPFS
Trigger: GGAGAAGGGACTGCGCTGCCAGAACCCAGCCTGCAT...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCAAGCTTGTCCATGCAGGCTaGGTTCTGGCAGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: ENQGWQSQEQRTRGHLGKLVHAG*VLAAQS
Trigger: GGACTGCGCTGCCAGAACCCAGCCTGCATGGACAAG...CTTGCCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCCAGTACTTCCCCCAGTaGCTTCTTCTTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVQYFPQ*LLLHGW
Trigger: CCAGCCATGAAGAAGAAGTCACTGGGGGAAGTACTG...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp AGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGTCAGGGCTGGCAGACTaGGGGACTTGGAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: SGTLGGLLGLHTHEAAVKSGLAD*GTWNPS
Trigger: TGAAGGATTCCAAGTCCCTCAGTCTGCCAGCCCTGA...CTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACTCCAGCCTCAGGCCTaGACTCTCTTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTLQPQA*TLFILL
Trigger: GAGGAGGATGAAGAGAGTTCAGGCCTGAGGCTGGAG...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCTCAGGAATGTTGCTaGACAAGCGCTCAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNSQECC*TSAQPQ
Trigger: TTGAGGCTGAGCGCTTGTTCAGCAACATTCCTGAGA...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTTCTCAGGAATGTTGCTaGACAAGCGCTCAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSSQECC*TSAQPQ
Trigger: TTGAGGCTGAGCGCTTGTTCAGCAACATTCCTGAGA...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCCTTAGCACCGACTTaGGCAGCAGTGGGTATTTGG +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVSLAPT*AAVGIW
Trigger: CCAAATACCCACTGCTGCTCAAGTCGGTGCTAAGGA...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTTCCTTAGCACCGACTTaGGCAGCAGTGGGTATTTGG +
Preference number: 4 (lower is better)
Translates to: GRFSLLSSGSGTLGGLLGSLAPT*AAVGIW
Trigger: CCAAATACCCACTGCTGCTCAAGTCGGTGCTAAGGA...ACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCACTCCGTGGAGCCATCTaGGGTGCAGTGCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSALRGAI*GAVLRV
Trigger: GACTCTGAGCACTGCACCTCAGATGGCTCCACGGAG...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCAAGAGGCCCCCGGTGGTaGAGCTGCTGGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPRGPRW*SCWQSA
Trigger: TGCCGACTGCCAGCAGCTGCACCACCGGGGGCCTCT...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCCGTCGTAGTGCAGGGTaGTGTGGAACTTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVRRSAG*CGTCYH
Trigger: GTGATAGCAAGTTCCACAGCACCCTGCACTACGACG...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGCGTCGTAGTGCAGGGTaGTGTGGAACTTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWRRSAG*CGTCYH
Trigger: GTGATAGCAAGTTCCACAGCACCCTGCACTACGACG...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGTGTCCAGGGATGCCTaGCTCTCCCAGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEAVSRDA*LSQEFR
Trigger: TCTGAATTCCTGGGAGAGGCAGGCATCCCTGGACAC...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGGTGTCCAGGGATGCCTaGCTCTCCCAGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: PRKSGLAESRAEDKRPPGVSRDA*LSQEFR
Trigger: TCTGAATTCCTGGGAGAGGCAGGCATCCCTGGACAC...CCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCATGCTGGTACCCCCACTaGTGCCAACGGGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSACWYPH*CQRAEN
Trigger: GTTCTCTGCCCGTTGGCAGCAGTGGGGGTACCAGCA...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GCAGAGGACAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTCTGGTCAGCTTCTCATaGCCATCAGTGAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AEDKRPPGQEGCVCVWSILVSFS*PSVSSL
Trigger: GAGGGAGCTCACTGATGGGCATGAGAAGCTGACCAG...AATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGTCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCAAGTCCTGTTGGTGGCACTaGCGCCTGGTCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ENQGWQSQEQRTRGHLGKSCWWH*RLVSFS
Trigger: TGAGAAGCTGACCAGGCGGCAGTGCCACCAACAGGA...CTTGCCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGCGCGCATGTACTCCATaGAGCCCTCCTCTTCCATAC +
Preference number: 4 (lower is better)
Translates to: SGTLGGLLGLHTHEAAVKRACTP*SPPLPY
Trigger: GTATGGAAGAGGAGGGCTGCATGGAGTACATGCGCG...CTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCAAGGCGCTGCCGCTCCTaGCGCTGCCGCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPRRCRS*RCRMHV
Trigger: CACGTGCATGCGGCAGCGGCAGGAGCGGCAGCGCCT...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGAGGCGCTGCCGCTCCTaGCGCTGCCGCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRRRCRS*RCRMHV
Trigger: CACGTGCATGCGGCAGCGGCAGGAGCGGCAGCGCCT...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAAGTGGGGGACAGGGTaGCATAGGCGGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSAKWGTG*HRRSPW
Trigger: CCATGGACTCCGCCTATGGCACCCTGTCCCCCACTT...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCAGCAGCTGGACAGGAGTaGGACGGCGGAGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPAAGQE*DGGGGV
Trigger: CACCCCGCCTCCGCCGTCGCACTCCTGTCCAGCTGC...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCAGGTCTGCAGCAGGGCTaGTGCGGGGAGGACAGGACC +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPGLQQG*CGEDRT
Trigger: GGTCCTGTCCTCCCCGCACCAGCCCTGCTGCAGACC...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGGGTCTGCAGCAGGGCTaGTGCGGGGAGGACAGGACC +
Preference number: 4 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMGLQQG*CGEDRT
Trigger: GGTCCTGTCCTCCCCGCACCAGCCCTGCTGCAGACC...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTGGGACAGGGGTGTGTTaGATTGATCCAGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPGTGVC*IDPGRC
Trigger: ACATCTACCTGGATCAATCCAACACACCCCTGTCCC...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CACACACACGAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCGGGACAGGGGTGTGTTaGATTGATCCAGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: HTHEAAVKQVLYPQRTGLGTGVC*IDPGRC
Trigger: ACATCTACCTGGATCAATCCAACACACCCCTGTCCC...GAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AGAGGACAGGGCTCTCTACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGACAAGGCCTGGCTGCTaGCCTGGAAAGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGQGSLLSLIQWHPRGLLTRPGC*PGKCRP
Trigger: GGGCCTACACTTTCCAGGCCAGCAGCCAGGCCTTGT...CAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTAGAGAGCCCTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCAAGTGCTCTTTCGAAGGATaGTGGGGGAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ENQGWQSQEQRTRGHLGKCSFEG*WGSWQL
Trigger: CAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCA...CTTGCCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGTGCTCTTTCGAAGGATaGTGGGGGAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLCSFEG*WGSWQL
Trigger: CAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCA...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAGCTCTACCACAACCATaGCCAGGGTCTCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSAALPQP*PGSPWS
Trigger: GCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGC...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp AGAGGACAGGGCTCTCTACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGGCTCTACCACAACCATaGCCAGGGTCTCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RGQGSLLSLIQWHPRGLLALPQP*PGSPWS
Trigger: GCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGC...CAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTAGAGAGCCCTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCCAGTACTTCCCCCAGTaGCTTCTTCTTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATQYFPQ*LLLHGW
Trigger: CCAGCCATGAAGAAGAAGTCACTGGGGGAAGTACTG...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGTCTTCCAGCTCTCATTaGTGCCACTGCTGGTACCCC +
Preference number: 4 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLSSSSH*CHCWYP
Trigger: GGGGTACCAGCAGTGGCATCAATGAGAGCTGGAAGA...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCAAGTCTTCCAGCTCTCATTaGTGCCACTGCTGGTACCCC +
Preference number: 4 (lower is better)
Translates to: ENQGWQSQEQRTRGHLGKSSSSH*CHCWYP
Trigger: GGGGTACCAGCAGTGGCATCAATGAGAGCTGGAAGA...CTTGCCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGTCCTTAGCACCGACTTaGGCAGCAGTGGGTATTTGG +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRSLAPT*AAVGIW
Trigger: CCAAATACCCACTGCTGCTCAAGTCGGTGCTAAGGA...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCAAGAGTAGGTCAGTaGAGAGGAAGCAGTACACGT +
Preference number: 4 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTPRVGQ*RGSSTR
Trigger: ACGTGTACTGCTTCCTCTTCACTGACCTACTCTTGG...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp AGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCTTAGGAGCCACAAAGTCTTaGAGGGAAGTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SGEAGAVSPEDRALYCLLGATKS*REVGDR
Trigger: CCTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCC...TAAGAGACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCAAGAGGCCCCCGGTGGTaGAGCTGCTGGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPRGPRW*SCWQSA
Trigger: TGCCGACTGCCAGCAGCTGCACCACCGGGGGCCTCT...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp ATTCAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTGCAAGGGGTGGGAAGGGTGCTGTGGAACTTaGTATCACAGGTCTCACACA +
Preference number: 4 (lower is better)
Translates to: IQWHPRGLLLTPPCKGWEGCCGT*YHRSHT
Trigger: TGTGTGAGACCTGTGATAGCAAGTTCCACAGCACCC...TTCCCACCCCTTGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR GCA 90 bp AGAGGACAGGGCTCTCTACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGGAATCCTTCACTCCCTaGTCCACCTTGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RGQGSLLSLIQWHPRGLLESFTP*STLPSS
Trigger: GGACGAGGGCAAGGTGGAGCAGGGAGTGAAGGATTC...CAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTAGAGAGCCCTGTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACTGGTCAGCTTCTCATaGCCATCAGTGAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTLVSFS*PSVSSL
Trigger: GAGGGAGCTCACTGATGGGCATGAGAAGCTGACCAG...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGAGGACAGGGCTCTCTACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGTCCTGTTGGTGGCACTaGCGCCTGGTCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RGQGSLLSLIQWHPRGLLSCWWH*RLVSFS
Trigger: TGAGAAGCTGACCAGGCGGCAGTGCCACCAACAGGA...CAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTAGAGAGCCCTGTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCTTATGTGCACGCAGCTGCTaGAGCTGGTTCTGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: SGEAGAVSPEDRALYCLLCARSC*SWFCAL
Trigger: CAACGCACAGAACCAGCTGCAGCAGCTGCGTGCACA...TAAGAGACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAAGCTGTGCACGCAGCTaGTGCAGCTGGTTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: GLELHRTLLYSIQSGKVQSCARS*CSWFCA
Trigger: CGCACAGAACCAGCTGCAGCAGCTGCGTGCACAGCT...TTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCTTAGAGGGAGGCTCAGACTaGACCCTGGACATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SGEAGAVSPEDRALYCLLEGGSD*TLDIVP
Trigger: TGGGACTATGTCCAGGGTGCAGTCTGAGCCTCCCTC...TAAGAGACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGGACAGGGGTGTGTTaGATTGATCCAGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSGTGVC*IDPGRC
Trigger: ACATCTACCTGGATCAATCCAACACACCCCTGTCCC...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAATTGGTGAGCCGCTGGTaGGGCTTGGCCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: GLELHRTLLYSIQSGKVQLVSRW*GLASMS
Trigger: TGACATGCTGGCCAAGCCCCACCAGCGGCTCACCAA...TTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACAAGTCTTGAAGGGAAGTaGGGGACAGGGTGCCATAGG +
Preference number: 4 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTSLEGK*GTGCHR
Trigger: CCTATGGCACCCTGTCCCCCACTTCCCTTCAAGACT...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCAAGCAGTACTTCCCCCAGTaGCTTCTTCTTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: ENQGWQSQEQRTRGHLGKQYFPQ*LLLHGW
Trigger: CCAGCCATGAAGAAGAAGTCACTGGGGGAAGTACTG...CTTGCCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTCTCAGGAATGTTGCTaGACAAGCGCTCAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATSQECC*TSAQPQ
Trigger: TTGAGGCTGAGCGCTTGTTCAGCAACATTCCTGAGA...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GCAGAGGACAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTCCAAGAGTAGGTCAGTaGAGAGGAAGCAGTACACGT +
Preference number: 4 (lower is better)
Translates to: AEDKRPPGQEGCVCVWSIPRVGQ*RGSSTR
Trigger: ACGTGTACTGCTTCCTCTTCACTGACCTACTCTTGG...AATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGTCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGCCAAGAGTAGGTCAGTaGAGAGGAAGCAGTACACGT +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRPRVGQ*RGSSTR
Trigger: ACGTGTACTGCTTCCTCTTCACTGACCTACTCTTGG...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGGATCAGGCACAGTTCTaGCAGGCTGCGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMDQAQF*QAAAGS
Trigger: GCTCCCAGCCGCAGCCTGTCAGAACTGTGCCTGATC...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GTCGCAGACATGGCTGTCACTACCCACTACCCATGCCATCACAGAATCATCTGTGCTGAAGCGACTGGCTaGCCGGTTCTTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VADMAVTTHYPCHHRIICAEATG*PVLPAL
Trigger: GAGAGCTGGAAGAACCGGGCAGCCAGTCGCTTCAGC...ACAGATGATTCTGTGATGGCATGGGTAGTGGGTAGTGACAGCCATGTCTGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR GCA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCACGCGCATGTACTCCATaGAGCCCTCCTCTTCCATAC +
Preference number: 4 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSARACTP*SPPLPY
Trigger: GTATGGAAGAGGAGGGCTGCATGGAGTACATGCGCG...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp GGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAGAGGGAGGCTCAGACTaGACCCTGGACATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GLELHRTLLYSIQSGKVQEGGSD*TLDIVP
Trigger: TGGGACTATGTCCAGGGTGCAGTCTGAGCCTCCCTC...TTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGAGCCGCTGGCACTGCTaGTGCTTCTCCGCCCACGTG +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRSRWHC*CFSAHV
Trigger: CACGTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCT...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGGCCGCTGGTGGGGCTTaGCCAGCATGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMAAGGA*PACHSA
Trigger: AGCTGAGTGACATGCTGGCCAAGCCCCACCAGCGGC...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp GGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAATATTTGGTGAGCCGCTaGTGGGGCTTGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: GLELHRTLLYSIQSGKVQYLVSR*WGLASM
Trigger: CATGCTGGCCAAGCCCCACCAGCGGCTCACCAAATA...TTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGTGCTGGCAGTCGGCATaGTGGCATACCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMCWQSA*WHTWLS
Trigger: CGACAGCCAGGTATGCCATCATGCCGACTGCCAGCA...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
CDS-3UTR TCA 90 bp ACATGGCTGTCACTACCCACTACCCATGCCATCACAGAATCATCTGTCCCTCCCTCAGGGCTGGCAGACTaGGGGACTTGGAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: TWLSLPTTHAITESSVPPSGLAD*GTWNPS
Trigger: TGAAGGATTCCAAGTCCCTCAGTCTGCCAGCCCTGA...GGGAGGGACAGATGATTCTGTGATGGCATGGGTAGTGGGTAGTGACAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR GCA 90 bp GTCGCAGACATGGCTGTCACTACCCACTACCCATGCCATCACAGAATCATCTGTGAATCCTTCACTCCCTaGTCCACCTTGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VADMAVTTHYPCHHRIICESFTP*STLPSS
Trigger: GGACGAGGGCAAGGTGGAGCAGGGAGTGAAGGATTC...ACAGATGATTCTGTGATGGCATGGGTAGTGGGTAGTGACAGCCATGTCTGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR GCA 90 bp GGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAACGCGCATGTACTCCATaGAGCCCTCCTCTTCCATAC +
Preference number: 4 (lower is better)
Translates to: GLELHRTLLYSIQSGKVQRACTP*SPPLPY
Trigger: GTATGGAAGAGGAGGGCTGCATGGAGTACATGCGCG...TTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCAGTACACGTCCATCTTaGTATCTTTCCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSSTRPS*YLSPPS
Trigger: TGAAGGAGGGGAAAGATAGCAAGATGGACGTGTACT...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCACTGTGCACTGAGCTGTaGACGCAGCTGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPLCTEL*TQLLQL
Trigger: CAGCTGCAGCAGCTGCGTGCACAGCTCAGTGCACAG...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGACAGTTCTGACAGGCTaGGGCTGGGAGCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRTVLTG*GWEPEA
Trigger: TGCCTCCGGCTCCCAGCCGCAGCCTGTCAGAACTGT...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCACACACTGCCTCCTGTTaGTGGCACTGCCGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPHTASC*WHCRLV
Trigger: GACCAGGCGGCAGTGCCACCAACAGGAGGCAGTGTG...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCAACAAGGCCTGGCTGCTaGCCTGGAAAGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPTRPGC*PGKCRP
Trigger: GGGCCTACACTTTCCAGGCCAGCAGCCAGGCCTTGT...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGTGGCCAGGGTCTCCGTaGAGCCATCTGAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMWPGSP*SHLRCS
Trigger: ACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCA...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCATGCTGGCAGTCGGCATaGTGGCATACCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPCWQSA*WHTWLS
Trigger: CGACAGCCAGGTATGCCATCATGCCGACTGCCAGCA...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
CDS-3UTR TCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCATGTAGGCCTCGAAGGTaGGGGACAGGGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPCRPRR*GTGVCW
Trigger: CCAACACACCCCTGTCCCTCACCTTCGAGGCCTACA...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATCTCATGCCCATCAGTaGGCTCCCTCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPSHAHQ*APSSCP
Trigger: AGGACAGCTGGAGGGAGCTCACTGATGGGCATGAGA...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGGCTCGCTGGTGGGAGTaGCAGAGGAAGCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMARWWE*QRKQCY
Trigger: GTAACACTGCTTCCTCTGTCACTCCCACCAGCGAGC...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGGCTGAAGCGACTGGCTaGCCGGTTCTTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRAEATG*PVLPAL
Trigger: GAGAGCTGGAAGAACCGGGCAGCCAGTCGCTTCAGC...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGTGTGCACGCAGCTGCTaGAGCTGGTTCTGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMCARSC*SWFCAL
Trigger: CAACGCACAGAACCAGCTGCAGCAGCTGCGTGCACA...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGTGCACGCAGCTGCTaGAGCTGGTTCTGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPCARSC*SWFCAL
Trigger: CAACGCACAGAACCAGCTGCAGCAGCTGCGTGCACA...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGAAGTGGGGGACAGGGTaGCATAGGCGGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRKWGTG*HRRSPW
Trigger: CCATGGACTCCGCCTATGGCACCCTGTCCCCCACTT...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGAGGCTCTGCAGATGCTaGCTGCCTGGGTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRRLCRC*LPGCSC
Trigger: ACAGGAGCACCCAGGCAGCCAGCATCTGCAGAGCCT...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGTGGCCAGGGTCTCCGTaGAGCCATCTGAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRWPGSP*SHLRCS
Trigger: ACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCA...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCATGGCCAGGGTCTCCGTaGAGCCATCTGAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPWPGSP*SHLRCS
Trigger: ACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCA...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGGCTCTACCACAACCATaGCCAGGGTCTCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRALPQP*PGSPWS
Trigger: GCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGC...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGTCTTCCAGCTCTCATTaGTGCCACTGCTGGTACCCC +
Preference number: 4 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMSSSSH*CHCWYP
Trigger: GGGGTACCAGCAGTGGCATCAATGAGAGCTGGAAGA...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGTCTCATGCCCATCAGTaGGCTCCCTCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRSHAHQ*APSSCP
Trigger: AGGACAGCTGGAGGGAGCTCACTGATGGGCATGAGA...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp GTCGCAGACATGGCTGTCACTACCCACTACCCATGCCATCACAGAATCATCTGTTCCTTAGCACCGACTTaGGCAGCAGTGGGTATTTGG +
Preference number: 4 (lower is better)
Translates to: VADMAVTTHYPCHHRIICSLAPT*AAVGIW
Trigger: CCAAATACCCACTGCTGCTCAAGTCGGTGCTAAGGA...ACAGATGATTCTGTGATGGCATGGGTAGTGGGTAGTGACAGCCATGTCTGCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR GCA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTTGTGTGTCTCCTCCTTaGTTTCTTCTTAGAGATTTT +
Preference number: 4 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSCVSPP*FLLRDF
Trigger: AAAATCTCTAAGAAGAAAGCAAGGAGGAGACACACA...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGTGTGTCTCCTCCTTaGTTTCTTCTTAGAGATTTT +
Preference number: 4 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRCVSPP*FLLRDF
Trigger: AAAATCTCTAAGAAGAAAGCAAGGAGGAGACACACA...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGCTGGTCAGCTTCTCATaGCCATCAGTGAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMLVSFS*PSVSSL
Trigger: GAGGGAGCTCACTGATGGGCATGAGAAGCTGACCAG...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATATCCACCTCGTCGTTaGTGCCCTCCACAACCTCGT +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPYPPRR*CPPQPR
Trigger: ACGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATA...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGAGTACACGTCCATCTTaGTATCTTTCCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLSTRPS*YLSPPS
Trigger: TGAAGGAGGGGAAAGATAGCAAGATGGACGTGTACT...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCATGTGCACGCAGCTGCTaGAGCTGGTTCTGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPCARSC*SWFCAL
Trigger: CAACGCACAGAACCAGCTGCAGCAGCTGCGTGCACA...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCAACCATATCCACCTCGTCGTTaGTGCCCTCCACAACCTCGT +
Preference number: 4 (lower is better)
Translates to: YSIQSGKVQIGHEVMRQPYPPRR*CPPQPR
Trigger: ACGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATA...TGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR TCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCACCAAGAGTAGGTCAGTaGAGAGGAAGCAGTACACGT +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPPRVGQ*RGSSTR
Trigger: ACGTGTACTGCTTCCTCTTCACTGACCTACTCTTGG...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGCGTCGTAGTGCAGGGTaGTGTGGAACTTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRRRSAG*CGTCYH
Trigger: GTGATAGCAAGTTCCACAGCACCCTGCACTACGACG...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCATGTGTGTCTCCTCCTTaGTTTCTTCTTAGAGATTTT +
Preference number: 4 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEACVSPP*FLLRDF
Trigger: AAAATCTCTAAGAAGAAAGCAAGGAGGAGACACACA...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGTGTGTGTCTCCTCCTTaGTTTCTTCTTAGAGATTTT +
Preference number: 4 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRCVSPP*FLLRDF
Trigger: AAAATCTCTAAGAAGAAAGCAAGGAGGAGACACACA...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR GCA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCAAGTACACGTCCATCTTaGTATCTTTCCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPSTRPS*YLSPPS
Trigger: TGAAGGAGGGGAAAGATAGCAAGATGGACGTGTACT...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS TCA 90 bp GCGCTGAGTCCTAACCCCAGGGGCCACAGAGATCAGGCACAGTTCTaGCAGGCTGCGGCTGGGAGCCGGAGGCACGCCACGGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: ALSPNPRGHRDQAQF*QAAAGSRRHATGGW
Trigger: CCAGCCGCCCGTGGCGTGCCTCCGGCTCCCAGCCGCAGCCTGTCAGAACTGTGCCTGATCTCTGTGGCCCCTGGGGTTAGGACTCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 90 bp GCGCCCGCGTCCGCCGCGCCTTCTCCAGCACTGGCACCATCACGCTaGCCCACAAGCCGCGGTGTAGCTTGGCGATCTCAGGAATGTTGC +
Preference number: 5 (lower is better)
Translates to: APASAAPSPALAPSR*PTSRGVAWRSQECC
Trigger: GCAACATTCCTGAGATCGCCAAGCTACACCGCGGCTTGTGGGGCAGCGTGATGGTGCCAGTGCTGGAGAAGGCGCGGCGGACGCGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 90 bp TCGATCCGGCTCACCACCCCCGCCAGGCGCTGCCGCTCCTGCCGCTaGCGCATGCACGTGTTCACGTGGTGTATGAAGCGTTCCACCGAG +
Preference number: 5 (lower is better)
Translates to: SIRLTTPARRCRSCR*RMHVFTWCMKRSTE
Trigger: CTCGGTGGAACGCTTCATACACCACGTGAACACGTGCATGCGGCAGCGGCAGGAGCGGCAGCGCCTGGCGGGGGTGGTGAGCCGGATCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 90 bp GGTGCAGCTGCTGGCAGTCGGCATGATGGCATACCTGGCTGTCGCTaGTGTGGGCATGACCCCCGACCCAGAGGAGCTGGGAGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GAAAGSRHDGIPGCR*CGHDPRPRGAGSLG
Trigger: CCCCAGACTCCCAGCTCCTCTGGGTCGGGGGTCATGCCCACAGCAGCGACAGCCAGGTATGCCATCATGCCGACTGCCAGCAGCTGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
CDS GCA 90 bp GGCAGTCGGCATGATGGCATACCTTGGCGGCCCGGCCCTTGTCCATaGAGGCTGGGTTCTGGCAGCGCAGTCCCTTCTCCTCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GSRHDGIPWRPGPCP*RLGSGSAVPSPLQG
Trigger: GCCCTGCAGAGGAGAAGGGACTGCGCTGCCAGAACCCAGCCTGCATGGACAAGGGCCGGGCCGCCAAGGTATGCCATCATGCCGACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 90 bp GGCCTCAGGGCTGGCAGACTGAGGGACTTGGAATCCTTCACTCCCTaGTCCACCTTGCCCTCGTCCCCCGGCTTGGCTTTGACCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GLRAGRLRDLESFTP*STLPSSPGLALTRR
Trigger: CCTGCGGGTCAAAGCCAAGCCGGGGGACGAGGGCAAGGTGGAGCAGGGAGTGAAGGATTCCAAGTCCCTCAGTCTGCCAGCCCTGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 90 bp GGCATGATGGCATACCTTGGCGGCCCGGCCCTTGTCCATGCAGGCTaGGTTCTGGCAGCGCAGTCCCTTCTCCTCTGCAGGGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: GMMAYLGGPALVHAG*VLAAQSLLLCRALV
Trigger: GACCAGAGCCCTGCAGAGGAGAAGGGACTGCGCTGCCAGAACCCAGCCTGCATGGACAAGGGCCGGGCCGCCAAGGTATGCCATCATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp CACACACACGAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTTGGCGGCCCGGCCCTaGTCCATGCAGGCTGGGTTC +
Preference number: 5 (lower is better)
Translates to: HTHEAAVKQVLYPQRTGLLAARP*SMQAGF
Trigger: GAACCCAGCCTGCATGGACAAGGGCCGGGCCGCCAA...GAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118648.8
CDS CCA 90 bp CACACGTTCCGACACAGGGGGCCCAGCCCCACTGGGCCTCAGGGCTaGCAGACTGAGGGACTTGGAATCCTTCACTCCCTGCTCCACCTT +
Preference number: 5 (lower is better)
Translates to: HTFRHRGPSPTGPQG*QTEGLGILHSLLHL
Trigger: AAGGTGGAGCAGGGAGTGAAGGATTCCAAGTCCCTCAGTCTGCCAGCCCTGAGGCCCAGTGGGGCTGGGCCCCCTGTGTCGGAACGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 90 bp CTGGCTCGACCACGGGGTGTGGAGCCACAAAGTCTTGAAGGGAAGTaGGGGACAGGGTGCCATAGGCGGAGTCCATGGAGCAGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: LARPRGVEPQSLEGK*GTGCHRRSPWSRSG
Trigger: GCCGCTCCTGCTCCATGGACTCCGCCTATGGCACCCTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCCACACCCCGTGGTCGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTCAGGTCTCACACAGGTaGAGAGGCCCCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPQVSHR*RGPRWC
Trigger: GCACCACCGGGGGCCTCTCAACCTGTGTGAGACCTG...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS TCA 90 bp GTCCCTTCTCCTCTGCAGGGCTCTGGTCTTCCCCCAAGTCCTCGATaGTGTCCAGAGCGGAGCTCCAGGAGAAGCGCTCCACAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: VPSPLQGSGLPPSPR*CPERSSRRSAPQPP
Trigger: TGGGGGCTGTGGAGCGCTTCTCCTGGAGCTCCGCTCTGGACATCATCGAGGACTTGGGGGAAGACCAGAGCCCTGCAGAGGAGAAGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000239025.2
CDS GCA 90 bp TGGTGGGGCTTGGCCAGCATGTCACTCAGCTTCAGCCGCTGGCACTaGTGGTGCTTCTCCGCCCACGTGACGTATGCCCGGAACAGATCG +
Preference number: 5 (lower is better)
Translates to: WWGLASMSLSFSRWH*WCFSAHVTYARNRS
Trigger: CGATCTGTTCCGGGCATACGTCACGTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCTGAAGCTGAGTGACATGCTGGCCAAGCCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCACTCCCTGCTCCACCTaGCCCTCGTCCCCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATTPCST*PSSPGL
Trigger: CAAGCCGGGGGACGAGGGCAAGGTGGAGCAGGGAGT...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GCAGAGGACAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTACTCCCTGCTCCACCTaGCCCTCGTCCCCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: AEDKRPPGQEGCVCVWSITPCST*PSSPGL
Trigger: CAAGCCGGGGGACGAGGGCAAGGTGGAGCAGGGAGT...AATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGTCCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCCCACACTGCCTCCTGTaGGTGGCACTGCCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LRQWYPWGSPWSSHTRGSPHCLL*VALPPG
Trigger: ACCAGGCGGCAGTGCCACCAACAGGAGGCAGTGTGG...GCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGCCCGGAACAGATCGTaGTCACGCAGCAGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: QWYPWGSPWSSHTRGSGEARNRS*SRSRPR
Trigger: GCGCGGCCTGCTGCGTGACAACGATCTGTTCCGGGC...TTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCGCCCGGAACAGATCGTaGTCACGCAGCAGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATARNRS*SRSRPR
Trigger: GCGCGGCCTGCTGCGTGACAACGATCTGTTCCGGGC...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCAGCCGCTGGTGGGGCTaGGCCAGCATGTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: WARGVCVCVEHCSQGLELSRWWG*ASMSLS
Trigger: GCTGAGTGACATGCTGGCCAAGCCCCACCAGCGGCT...GAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS GCA 90 bp CGTGTCCAGGGATGCCTGCCTCTCCCAGGAATTCAGACATGTTCTTaGGACGGCGGCCAGGGGCCAAGATGTCCAGACTGCTCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: RVQGCLPLPGIQTCS*DGGQGPRCPDCSLG
Trigger: GCCGAGAGAGCAGTCTGGACATCTTGGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAATTCCTGGGAGAGGCAGGCATCCCTGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 90 bp ACTGGTGCTCGGGCTGGAGCTGAAGAAGCCGCTGAAGCGACTGGCTaGCCGGTTCTTCCAGCTCTCATTGATGCCACTGCTGGTACCCCC +
Preference number: 5 (lower is better)
Translates to: TGARAGAEEAAEATG*PVLPALIDATAGTP
Trigger: GGGGGTACCAGCAGTGGCATCAATGAGAGCTGGAAGAACCGGGCAGCCAGTCGCTTCAGCGGCTTCTTCAGCTCCAGCCCGAGCACCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 90 bp CCGTGGAGCCATCTGAGGTGCAGTGCTCAGAGTCGAGGCTGTTGCTaGTCTTTCGAAGGATGGTGGGGGAGCTGGCAGCTGAGGTACCGC +
Preference number: 5 (lower is better)
Translates to: PWSHLRCSAQSRGCC*SFEGWWGSWQLRYR
Trigger: GCGGTACCTCAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGAGCACTGCACCTCAGATGGCTCCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 90 bp ACAGTGTCGCCCCAGGCTCTACCACAACCATGGCCAGGGTCTCCGTaGAGCCATCTGAGGTGCAGTGCTCAGAGTCGAGGCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: TVSPQALPQPWPGSP*SHLRCSAQSRGCCC
Trigger: GCAGCAACAGCCTCGACTCTGAGCACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGCCTGGGGCGACACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCCAGGTCTCACACAGGTaGAGAGGCCCCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATQVSHR*RGPRWC
Trigger: GCACCACCGGGGGCCTCTCAACCTGTGTGAGACCTG...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGCAGGTCTCACACAGGTaGAGAGGCCCCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRQVSHR*RGPRWC
Trigger: GCACCACCGGGGGCCTCTCAACCTGTGTGAGACCTG...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGACTCCCTGCTCCACCTaGCCCTCGTCCCCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLTPCST*PSSPGL
Trigger: CAAGCCGGGGGACGAGGGCAAGGTGGAGCAGGGAGT...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCAAGGCCCGGAACAGATCGTaGTCACGCAGCAGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: ENQGWQSQEQRTRGHLGKARNRS*SRSRPR
Trigger: GCGCGGCCTGCTGCGTGACAACGATCTGTTCCGGGC...CTTGCCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS TCA 90 bp AGTGCAGGGTGCTGTGGAACTTGCTATCACAGGTCTCACACAGGTTaGGAGGCCCCCGGTGGTGCAGCTGCTGGCAGTCGGCATGATGGC +
Preference number: 5 (lower is better)
Translates to: SAGCCGTCYHRSHTG*EAPGGAAAGSRHDG
Trigger: GCCATCATGCCGACTGCCAGCAGCTGCACCACCGGGGGCCTCTCAACCTGTGTGAGACCTGTGATAGCAAGTTCCACAGCACCCTGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 90 bp GGCTTGGCCAGCATGTCACTCAGCTTCAGCCGCTGGCACTGCTGGTaGTTCTCCGCCCACGTGACGTATGCCCGGAACAGATCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GLASMSLSFSRWHCW*FSAHVTYARNRSLS
Trigger: TGACAACGATCTGTTCCGGGCATACGTCACGTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCTGAAGCTGAGTGACATGCTGGCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 90 bp CTTCCTCTTCCTCCTCCCAGGAGTCATGGTCAAAGCGCAGCCTCCTaGGCATCCGGGGTAGCCCGAAAAGGCTGTAGGCATGGAGCTTGC +
Preference number: 5 (lower is better)
Translates to: LPLPPPRSHGQSAAS*ASGVARKGCRHGAC
Trigger: GCAAGCTCCATGCCTACAGCCTTTTCGGGCTACCCCGGATGCCCAGGAGGCTGCGCTTTGACCATGACTCCTGGGAGGAGGAAGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 90 bp CAAACTCCGGGGAAGACAGTGTCGCCCCAGGCTCTACCACAACCATaGCCAGGGTCTCCGTGGAGCCATCTGAGGTGCAGTGCTCAGAGT +
Preference number: 5 (lower is better)
Translates to: QTPGKTVSPQALPQP*PGSPWSHLRCSAQS
Trigger: ACTCTGAGCACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGCCTGGGGCGACACTGTCTTCCCCGGAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp GGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTGGCAGACTGAGGGACTaGGAATCCTTCACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: GGRQVLSAVLRQWYPWGSGRLRD*ESFTPC
Trigger: GCAGGGAGTGAAGGATTCCAAGTCCCTCAGTCTGCC...AGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGAATTCAGACATGTTCTaGCGACGGCGGCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWNSDMF*RRRPGA
Trigger: GGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAATT...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAGCCCGGAACAGATCGTaGTCACGCAGCAGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSAARNRS*SRSRPR
Trigger: GCGCGGCCTGCTGCGTGACAACGATCTGTTCCGGGC...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACAAGCCGCTGGTGGGGCTaGGCCAGCATGTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTSRWWG*ASMSLS
Trigger: GCTGAGTGACATGCTGGCCAAGCCCCACCAGCGGCT...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTTATCCACCTCGTCGTaGCTGCCCTCCACAACCTCG +
Preference number: 5 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRLSTSS*LPSTTS
Trigger: CGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATAA...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCCCGGCACACAATCTaGTCCACCAGTAGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: EAAVKQVLYPQRTGLSTVSRHTI*STSSGG
Trigger: GCCACCGCTACTGGTGGACAAGATTGTGTGCCGGGA...GACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTTCCCGGCACACAATCTaGTCCACCAGTAGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTSRHTI*STSSGG
Trigger: GCCACCGCTACTGGTGGACAAGATTGTGTGCCGGGA...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGAGGCTAGCCTCCGATTaGGACTTGAGCAGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRRLASD*DLSRRG
Trigger: GCCCCGCCTGCTCAAGTCCAAATCGGAGGCTAGCCT...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS TCA 90 bp GTAGAGCTGGGCCAGGGTCAGCTTCCTGTGTTGAGCAGAGACCCCTaGGGGAGGCTCAGACTGCACCCTGGACATAGTCCCAGAAGGCAT +
Preference number: 5 (lower is better)
Translates to: VELGQGQLPVLSRDP*GRLRLHPGHSPRRH
Trigger: ATGCCTTCTGGGACTATGTCCAGGGTGCAGTCTGAGCCTCCCTCAGGGGTCTCTGCTCAACACAGGAAGCTGACCCTGGCCCAGCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 90 bp TCTCCGTGGAGCCATCTGAGGTGCAGTGCTCAGAGTCGAGGCTGTTaGTGCTCTTTCGAAGGATGGTGGGGGAGCTGGCAGCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: SPWSHLRCSAQSRGC*CSFEGWWGSWQLRY
Trigger: GTACCTCAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGAGCACTGCACCTCAGATGGCTCCACGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 90 bp CAGAGTCGAGGCTGTTGCTGCTCTTTCGAAGGATGGTGGGGGAGCTaGCAGCTGAGGTACCGCTCTCTTCACCCTCCTCCTCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: QSRGCCCSFEGWWGS*QLRYRSLHPPPPAH
Trigger: ATGAGCAGGAGGAGGAGGGTGAAGAGAGCGGTACCTCAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 90 bp TGCAGTGCTCAGAGTCGAGGCTGTTGCTGCTCTTTCGAAGGATGGTaGGGGAGCTGGCAGCTGAGGTACCGCTCTCTTCACCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: CSAQSRGCCCSFEGW*GSWQLRYRSLHPPP
Trigger: AGGAGGAGGGTGAAGAGAGCGGTACCTCAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGAGCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 90 bp AGGTGCAGTGCTCAGAGTCGAGGCTGTTGCTGCTCTTTCGAAGGATaGTGGGGGAGCTGGCAGCTGAGGTACCGCTCTCTTCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: RCSAQSRGCCCSFEG*WGSWQLRYRSLHPP
Trigger: AGGAGGGTGAAGAGAGCGGTACCTCAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGAGCACTGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp GGGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCAAGGTGAAGCACTCCTaGCTCGGGTCATCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GREAGSLCCPQAVVPLGVKVKHS*LGSSVC
Trigger: ACACACAGATGACCCGAGCAAGGAGTGCTTCACCTT...GACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCGGCAGACTGAGGGACTaGGAATCCTTCACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: WARGVCVCVEHCSQGLELGRLRD*ESFTPC
Trigger: GCAGGGAGTGAAGGATTCCAAGTCCCTCAGTCTGCC...GAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAAATTCAGACATGTTCTaGCGACGGCGGCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEANSDMF*RRRPGA
Trigger: GGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAATT...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGCTCACACCTCCCTGCACCACACTGCCTCCTGTaGGTGGCACTGCCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: YCLLFSGTLGVSCSHLPAPHCLL*VALPPG
Trigger: ACCAGGCGGCAGTGCCACCAACAGGAGGCAGTGTGG...TGCAGGGAGGTGTGAGCAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR CAA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAGCCGCTGGTGGGGCTaGGCCAGCATGTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSASRWWG*ASMSLS
Trigger: GCTGAGTGACATGCTGGCCAAGCCCCACCAGCGGCT...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GGGAGGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCAGAGTCGAGGCTGTaGCTGCTCTTTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: GREAGSLCCPQAVVPLGVSESRL*LLFRRM
Trigger: CATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGA...GACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGGAGCCACAAAGTCTaGAAGGGAAGTGGGGGACAG +
Preference number: 5 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRWSHKV*KGSGGQ
Trigger: CTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCCA...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACAAGGCTAGCCTCCGATTaGGACTTGAGCAGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: SLCCPQAVVPLGVSLVFTRLASD*DLSRRG
Trigger: GCCCCGCCTGCTCAAGTCCAAATCGGAGGCTAGCCT...TGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGAGGCTAGCCTCCGATTaGGACTTGAGCAGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLRLASD*DLSRRG
Trigger: GCCCCGCCTGCTCAAGTCCAAATCGGAGGCTAGCCT...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS GCA 90 bp GCTCTGCAGATGCTGGCTGCCTGGGTGCTCCTGTGCACTGAGCTGTaGACGCAGCTGCTGCAGCTGGTTCTGTGCGTTGTAAATAGTGTC +
Preference number: 5 (lower is better)
Translates to: ALQMLAAWVLLCTEL*TQLLQLVLCVVNSV
Trigger: GACACTATTTACAACGCACAGAACCAGCTGCAGCAGCTGCGTGCACAGCTCAGTGCACAGGAGCACCCAGGCAGCCAGCATCTGCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 90 bp GCTCTACCACAACCATGGCCAGGGTCTCCGTGGAGCCATCTGAGGTaGAGTGCTCAGAGTCGAGGCTGTTGCTGCTCTTTCGAAGGATGG +
Preference number: 5 (lower is better)
Translates to: ALPQPWPGSPWSHLR*SAQSRGCCCSFEGW
Trigger: CCATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGAGCACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp CACACACACGAGGCAGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCAAGGTGAAGCACTCCTaGCTCGGGTCATCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: HTHEAAVKQVLYPQRTGLKVKHS*LGSSVC
Trigger: ACACACAGATGACCCGAGCAAGGAGTGCTTCACCTT...GAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCTGCCTCGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTTCTTCCAGCTCTCATaGATGCCACTGCTGGTACCC +
Preference number: 5 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNFFQLS*MPLLVP
Trigger: GGGTACCAGCAGTGGCATCAATGAGAGCTGGAAGAA...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCATTATCCACCTCGTCGTaGCTGCCCTCCACAACCTCG +
Preference number: 5 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEALSTSS*LPSTTS
Trigger: CGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATAA...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCACAGTTATCCACCTCGTCGTaGCTGCCCTCCACAACCTCG +
Preference number: 5 (lower is better)
Translates to: KRGVCVCGALQPGPGTPQLSTSS*LPSTTS
Trigger: CGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATAA...CTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GAGGTGATGAGGCAACCACCCTGCCTGGCGCTCTGGCACACATGCACACATGAGTGGAGCCACAAAGTCTaGAAGGGAAGTGGGGGACAG +
Preference number: 5 (lower is better)
Translates to: EVMRQPPCLALWHTCTHEWSHKV*KGSGGQ
Trigger: CTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCCA...CTCATGTGTGCATGTGTGCCAGAGCGCCAGGCAGGGTGGTTGCCTCATCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTGGAGCCACAAAGTCTaGAAGGGAAGTGGGGGACAG +
Preference number: 5 (lower is better)
Translates to: RQVLSAVLRQWYPWGSPWWSHKV*KGSGGQ
Trigger: CTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCCA...CCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTCAGGGGTGTGTTGGATaGATCCAGGTAGATGTCTAC +
Preference number: 5 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPQGCVG*IQVDVY
Trigger: GTAGACATCTACCTGGATCAATCCAACACACCCCTG...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCAAGGGCAGACTGAGGGACTaGGAATCCTTCACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: ENQGWQSQEQRTRGHLGKGRLRD*ESFTPC
Trigger: GCAGGGAGTGAAGGATTCCAAGTCCCTCAGTCTGCC...CTTGCCCAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGGGCAGACTGAGGGACTaGGAATCCTTCACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLGRLRD*ESFTPC
Trigger: GCAGGGAGTGAAGGATTCCAAGTCCCTCAGTCTGCC...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGAGGACAGGGCTCTCTACTGTCTCTTATTCAGTGGCACCCTAGGGGTCTCCTGAATTCAGACATGTTCTaGCGACGGCGGCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: RGQGSLLSLIQWHPRGLLNSDMF*RRRPGA
Trigger: GGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAATT...CAGGAGACCCCTAGGGTGCCACTGAATAAGAGACAGTAGAGAGCCCTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTTCCAGCTGTTCCATCTaGTCTACCTCCCGGCTAAAG +
Preference number: 5 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTSSCSI*STSRLK
Trigger: CTTTAGCCGGGAGGTAGACAAGATGGAACAGCTGGA...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCTTATCCCGGCACACAATCTaGTCCACCAGTAGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: SGEAGAVSPEDRALYCLLSRHTI*STSSGG
Trigger: GCCACCGCTACTGGTGGACAAGATTGTGTGCCGGGA...TAAGAGACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CGCCCAGCCACTAGAGTGGGTCGAAAGCTCTGCTTCCCATTCAGCCTCCAGAGGTCAGAGTCGAGGCTGTaGCTGCTCTTTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: RPATRVGRKLCFPFSLQRSESRL*LLFRRM
Trigger: CATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGA...CCTCTGGAGGCTGAATGGGAAGCAGAGCTTTCGACCCACTCTAGTGGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR CAA 90 bp CGTCGCAGACATGGCTGTCACTACCCACTACCCATGCCATCACAGAATCATCTGAGGCTAGCCTCCGATTaGGACTTGAGCAGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: RRRHGCHYPLPMPSQNHLRLASD*DLSRRG
Trigger: GCCCCGCCTGCTCAAGTCCAAATCGGAGGCTAGCCT...CAGATGATTCTGTGATGGCATGGGTAGTGGGTAGTGACAGCCATGTCTGCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084115.4
CDS-3UTR CAA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCACAGGTCTCACACAGGTaGAGAGGCCCCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPQVSHR*RGPRWC
Trigger: GCACCACCGGGGGCCTCTCAACCTGTGTGAGACCTG...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCAGGGTGCTGTGGAACTaGCTATCACAGGTCTCACAC +
Preference number: 5 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATRVLWN*LSQVSH
Trigger: GTGTGAGACCTGTGATAGCAAGTTCCACAGCACCCT...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTCCACAGAAGGTGAAGCACTCCTaGCTCGGGTCATCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: KRGVCVCGALQPGPGTPQKVKHS*LGSSVC
Trigger: ACACACAGATGACCCGAGCAAGGAGTGCTTCACCTT...CTGTGGAGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGACTCCCTGCTCCACCTaGCCCTCGTCCCCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRTPCST*PSSPGL
Trigger: CAAGCCGGGGGACGAGGGCAAGGTGGAGCAGGGAGT...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAATTCTTCCAGCTCTCATaGATGCCACTGCTGGTACCC +
Preference number: 5 (lower is better)
Translates to: QWYPWGSPWSSHTRGSGEFFQLS*MPLLVP
Trigger: GGGTACCAGCAGTGGCATCAATGAGAGCTGGAAGAA...TTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CCAGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTTCTTCCAGCTCTCATaGATGCCACTGCTGGTACCC +
Preference number: 5 (lower is better)
Translates to: PAQKIRAGRVKSRGQEATFFQLS*MPLLVP
Trigger: GGGTACCAGCAGTGGCATCAATGAGAGCTGGAAGAA...GGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GCAGAGGACAAGAGGCCACCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTTCCAGCTGTTCCATCTaGTCTACCTCCCGGCTAAAG +
Preference number: 5 (lower is better)
Translates to: AEDKRPPGQEGCVCVWSISSCSI*STSRLK
Trigger: CTTTAGCCGGGAGGTAGACAAGATGGAACAGCTGGA...AATGCTCCACACACACACACACCCCTCTTGCCCAGGTGGCCTCTTGTCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCACCACACTGCCTCCTGTaGGTGGCACTGCCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPPHCLL*VALPPG
Trigger: ACCAGGCGGCAGTGCCACCAACAGGAGGCAGTGTGG...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACTAACATCTTGAAGCCTTaGAGAAAGTCGCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LGKRGVCVCGALQPGPGTNILKP*RKSLGC
Trigger: GCAGCCCAGCGACTTTCTCAAAGGCTTCAAGATGTT...AGTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GGGAGGCAGGTTCTCTCTGCTGTCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTAGTGAGCCGAACATCTaGAAGCCTTTGAGAAAGTCG +
Preference number: 5 (lower is better)
Translates to: GRQVLSAVLRQWYPWGSPSEPNI*KPLRKS
Trigger: CGACTTTCTCAAAGGCTTCAAGATGTTCGGCTCACT...AGGAGACCCCCAAGGGTACCACTGCCTGAGGACAGCAGAGAGAACCTGCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CCTGGGCAAGAGGGGTGTGTGTGTGTGTGGAGCATTGCAGCCAGGGCCTGGAACAGTGAGCCGAACATCTaGAAGCCTTTGAGAAAGTCG +
Preference number: 5 (lower is better)
Translates to: PGQEGCVCVWSIAARAWNSEPNI*KPLRKS
Trigger: CGACTTTCTCAAAGGCTTCAAGATGTTCGGCTCACT...GTTCCAGGCCCTGGCTGCAATGCTCCACACACACACACACCCCTCTTGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGAGTGAGCCGAACATCTaGAAGCCTTTGAGAAAGTCG +
Preference number: 5 (lower is better)
Translates to: QAVVPLGVSLVFTHTRQRSEPNI*KPLRKS
Trigger: CGACTTTCTCAAAGGCTTCAAGATGTTCGGCTCACT...CCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAATCAGAGTCGAGGCTGTaGCTGCTCTTTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: QWYPWGSPWSSHTRGSGESESRL*LLFRRM
Trigger: CATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGA...TTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCAGCGGTGAAGTCAGAGTCGAGGCTGTaGCTGCTCTTTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: SGTLGGLLGLHTHEAAVKSESRL*LLFRRM
Trigger: CATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGA...CTTCACCGCTGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS GCA 90 bp CAGGGGTGTGTTGGATTGATCCAGGTAGATGTCTACCTTGCCCAGTaGGATGCCCTTCCTCTCAAACACAGGCAGCAGTACTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: QGCVGLIQVDVYLAQ*DALPLKHRQQYFPQ
Trigger: CTGGGGGAAGTACTGCTGCCTGTGTTTGAGAGGAAGGGCATCGCACTGGGCAAGGTAGACATCTACCTGGATCAATCCAACACACCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp TCCTCAGGCAGTGGTACCCTTGGGGGTCTCCTTGGTCTTCACACACACGAGGCACAGGGGTGTGTTGGATaGATCCAGGTAGATGTCTAC +
Preference number: 5 (lower is better)
Translates to: SSGSGTLGGLLGLHTHEAQGCVG*IQVDVY
Trigger: GTAGACATCTACCTGGATCAATCCAACACACCCCTG...TGCCTCGTGTGTGTGAAGACCAAGGAGACCCCCAAGGGTACCACTGCCTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TGCACACATGAGGAGCTGAGAAGCAGGTGCTGTGACTTCTGGGAGGGAGGCAGGAACATCTTGAAGCCTTaGAGAAAGTCGCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: CTHEELRSRCCDFWEGGRNILKP*RKSLGC
Trigger: GCAGCCCAGCGACTTTCTCAAAGGCTTCAAGATGTT...CCTGCCTCCCTCCCAGAAGTCACAGCACCTGCTTCTCAGCTCCTCATGTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCTTATGGAGCCACAAAGTCTaGAAGGGAAGTGGGGGACAG +
Preference number: 5 (lower is better)
Translates to: SGEAGAVSPEDRALYCLLWSHKV*KGSGGQ
Trigger: CTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCCA...TAAGAGACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS CCA 90 bp CTTCCAGCAGCAGCTGTCGGGTCTCTTCAGGGGAGGTTCCAGGCATaGGTGCTGTCAGGTCCAGATGTAGAAATTCCTTCAGGAGCTTAT +
Preference number: 5 (lower is better)
Translates to: LPAAAVGSLQGRFQA*VLSGPDVEIPSGAY
Trigger: ATAAGCTCCTGAAGGAATTTCTACATCTGGACCTGACAGCACCCATGCCTGGAACCTCCCCTGAAGAGACCCGACAGCTGCTGCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp AGCGGTGAAGCAGGTGCTGTATCCCCAGAGGACAGGGCTCTCTACTGTCTCTTATTCTTCCAGCTCTCATaGATGCCACTGCTGGTACCC +
Preference number: 5 (lower is better)
Translates to: SGEAGAVSPEDRALYCLLFFQLS*MPLLVP
Trigger: GGGTACCAGCAGTGGCATCAATGAGAGCTGGAAGAA...TAAGAGACAGTAGAGAGCCCTGTCCTCTGGGGATACAGCACCTGCTTCACCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCATCCAGCTGTTCCATCTaGTCTACCTCCCGGCTAAAG +
Preference number: 5 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSASSCSI*STSRLK
Trigger: CTTTAGCCGGGAGGTAGACAAGATGGAACAGCTGGA...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS GCA 90 bp GTGTGTTGGATTGATCCAGGTAGATGTCTACCTTGCCCAGTGCGATaGCCTTCCTCTCAAACACAGGCAGCAGTACTTCCCCCAGTGACT +
Preference number: 5 (lower is better)
Translates to: VCWIDPGRCLPCPVR*PSSQTQAAVLPPVT
Trigger: AGTCACTGGGGGAAGTACTGCTGCCTGTGTTTGAGAGGAAGGGCATCGCACTGGGCAAGGTAGACATCTACCTGGATCAATCCAACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGAATTCAGACATGTTCTaGCGACGGCGGCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRNSDMF*RRRPGA
Trigger: GGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAATT...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GGGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAACATCTTGAAGCCTTaGAGAAAGTCGCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GPGTPQDPSLFHPVWQSANILKP*RKSLGC
Trigger: GCAGCCCAGCGACTTTCTCAAAGGCTTCAAGATGTT...TGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp AGCCCAGAAAATCAGGGCTGGCAGAGTCAAGAGCAGAGGACAAGAGGCCACCTGAGTGAGCCGAACATCTaGAAGCCTTTGAGAAAGTCG +
Preference number: 5 (lower is better)
Translates to: SPENQGWQSQEQRTRGHLSEPNI*KPLRKS
Trigger: CGACTTTCTCAAAGGCTTCAAGATGTTCGGCTCACT...CAGGTGGCCTCTTGTCCTCTGCTCTTGACTCTGCCAGCCCTGATTTTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATTATCCACCTCGTCGTaGCTGCCCTCCACAACCTCG +
Preference number: 5 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPLSTSS*LPSTTS
Trigger: CGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATAA...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp GGCCTGGAACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAACAGGGGTGTGTTGGATaGATCCAGGTAGATGTCTAC +
Preference number: 5 (lower is better)
Translates to: GLELHRTLLYSIQSGKVQQGCVG*IQVDVY
Trigger: GTAGACATCTACCTGGATCAATCCAACACACCCCTG...TTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGTTCCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS TCA 90 bp TCCTCTCTGCTTTCTTCACGGCCTTGGTCACCAAGAGTAGGTCAGTaGAGAGGAAGCAGTACACGTCCATCTTGCTATCTTTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SSLLSSRPWSPRVGQ*RGSSTRPSCYLSPP
Trigger: AGGAGGGGAAAGATAGCAAGATGGACGTGTACTGCTTCCTCTTCACTGACCTACTCTTGGTGACCAAGGCCGTGAAGAAAGCAGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS-3UTR CAA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGAAGGTGAAGCACTCCTaGCTCGGGTCATCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRKVKHS*LGSSVC
Trigger: ACACACAGATGACCCGAGCAAGGAGTGCTTCACCTT...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp TCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGCAGGGGTGTGTTGGATaGATCCAGGTAGATGTCTAC +
Preference number: 5 (lower is better)
Translates to: STGPFSIPSSLAKCKLAMQGCVG*IQVDVY
Trigger: GTAGACATCTACCTGGATCAATCCAACACACCCCTG...CATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp CTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCATGAGGTGATGAGGTCCAGCTGTTCCATCTaGTCTACCTCCCGGCTAAAG +
Preference number: 5 (lower is better)
Translates to: LLYSIQSGKVQIGHEVMRSSCSI*STSRLK
Trigger: CTTTAGCCGGGAGGTAGACAAGATGGAACAGCTGGA...CCTCATCACCTCATGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS-3UTR CAA 90 bp ACTCCACAGGACCCTTCTCTATTCCATCCAGTCTGGCAAAGTGCAAATTGGCCAAACATCTTGAAGCCTTaGAGAAAGTCGCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: TPQDPSLFHPVWQSANWPNILKP*RKSLGC
Trigger: GCAGCCCAGCGACTTTCTCAAAGGCTTCAAGATGTT...TGGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
CDS TCA 90 bp GCACAATTTCTGTTTCGATGTCCACGTTCAGGTCGAATTTCAAGGTaGAGCACTCCTTGCTCGGGTCATCTGTGTGTCTCCTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: AQFLFRCPRSGRISR*STPCSGHLCVSSLL
Trigger: AAGCAAGGAGGAGACACACAGATGACCCGAGCAAGGAGTGCTTCACCTTGAAATTCGACCTGAACGTGGACATCGAAACAGAAATTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 90 bp TCTCAAACACAGGCAGCAGTACTTCCCCCAGTGACTTCTTCTTCATaGCTGGCACAATTTCTGTTTCGATGTCCACGTTCAGGTCGAATT +
Preference number: 5 (lower is better)
Translates to: SQTQAAVLPPVTSSS*LAQFLFRCPRSGRI
Trigger: AATTCGACCTGAACGTGGACATCGAAACAGAAATTGTGCCAGCCATGAAGAAGAAGTCACTGGGGGAAGTACTGCTGCCTGTGTTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp CAGGGGCCACAGAGATCAGGCACAGTTCTGACAGGCTaGGGCTGGGAGCCGGAGGCACGCCACGGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: QGPQRSGTVLTG*GWEPEARHGRL
Trigger: CAGCCGCCCGTGGCGTGCCTCCGGCTCCCAGCCGCAGCCTGTCAGAACTGTGCCTGATCTCTGTGGCCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp CCACAGAGATCAGGCACAGTTCTGACAGGCTGCGGCTaGGAGCCGGAGGCACGCCACGGGCGGCTGGGGTTC +
Preference number: 6 (lower is better)
Translates to: PQRSGTVLTGCG*EPEARHGRLGF
Trigger: GAACCCCAGCCGCCCGTGGCGTGCCTCCGGCTCCCAGCCGCAGCCTGTCAGAACTGTGCCTGATCTCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS TCA 72 bp CCTAACCCCAGGGGCCACAGAGATCAGGCACAGTTCTaGCAGGCTGCGGCTGGGAGCCGGAGGCACGCCACG +
Preference number: 6 (lower is better)
Translates to: PNPRGHRDQAQF*QAAAGSRRHAT
Trigger: CGTGGCGTGCCTCCGGCTCCCAGCCGCAGCCTGTCAGAACTGTGCCTGATCTCTGTGGCCCCTGGGGTTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp CTCACCACCCCCGCCAGGCGCTGCCGCTCCTGCCGCTaGCGCATGCACGTGTTCACGTGGTGTATGAAGCGT +
Preference number: 6 (lower is better)
Translates to: LTTPARRCRSCR*RMHVFTWCMKR
Trigger: ACGCTTCATACACCACGTGAACACGTGCATGCGGCAGCGGCAGGAGCGGCAGCGCCTGGCGGGGGTGGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp TTGGCGGCCCGGCCCTTGTCCATGCAGGCTGGGTTCTaGCAGCGCAGTCCCTTCTCCTCTGCAGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: LAARPLSMQAGF*QRSPFSSAGLW
Trigger: CCAGAGCCCTGCAGAGGAGAAGGGACTGCGCTGCCAGAACCCAGCCTGCATGGACAAGGGCCGGGCCGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp GCTGGCAGTCGGCATGATGGCATACCTGGCTGTCGCTaGTGTGGGCATGACCCCCGACCCAGAGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: AGSRHDGIPGCR*CGHDPRPRGAG
Trigger: CCCAGCTCCTCTGGGTCGGGGGTCATGCCCACAGCAGCGACAGCCAGGTATGCCATCATGCCGACTGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
CDS GCA 72 bp TCTTGCGACGGCGGCCAGGGGCCAAGATGTCCAGACTaGTCTCTCGGCGGCTCTGAGGGTCCACACGTTCCG +
Preference number: 6 (lower is better)
Translates to: SCDGGQGPRCPD*SLGGSEGPHVP
Trigger: CGGAACGTGTGGACCCTCAGAGCCGCCGAGAGAGCAGTCTGGACATCTTGGCCCCTGGCCGCCGTCGCAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp TCCGCCGCGCCTTCTCCAGCACTGGCACCATCACGCTaGCCCACAAGCCGCGGTGTAGCTTGGCGATCTCAG +
Preference number: 6 (lower is better)
Translates to: SAAPSPALAPSR*PTSRGVAWRSQ
Trigger: CTGAGATCGCCAAGCTACACCGCGGCTTGTGGGGCAGCGTGATGGTGCCAGTGCTGGAGAAGGCGCGGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp GCATACCTTGGCGGCCCGGCCCTTGTCCATGCAGGCTaGGTTCTGGCAGCGCAGTCCCTTCTCCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: AYLGGPALVHAG*VLAAQSLLLCR
Trigger: CCTGCAGAGGAGAAGGGACTGCGCTGCCAGAACCCAGCCTGCATGGACAAGGGCCGGGCCGCCAAGGTATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp GGGAGGACAGGACCGGGTGGAAACATTCCGGGCCAGGACAGAGCCTaGCGGGGGCAGGTCAAATCGGACATGGCCGTCGTAGTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: GRTGPGGNIPGQDRA*RGQVKSDMAVVVQG
Trigger: ACCCTGCACTACGACGGCCATGTCCGATTTGACCTGCCCCCGCAAGGCTCTGTCCTGGCCCGGAATGTTTCCACCCGGTCCTGTCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp TTGGCCAGCATGTCACTCAGCTTCAGCCGCTGGCACTaGTGGTGCTTCTCCGCCCACGTGACGTATGCCCGG +
Preference number: 6 (lower is better)
Translates to: LASMSLSFSRWH*WCFSAHVTYAR
Trigger: CCGGGCATACGTCACGTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCTGAAGCTGAGTGACATGCTGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp CAGGCTCTGCAGATGCTGGCTGCCTGGGTGCTCCTGTaGACTGAGCTGTGCACGCAGCTGCTGCAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: QALQMLAAWVLL*TELCTQLLQLV
Trigger: AACCAGCTGCAGCAGCTGCGTGCACAGCTCAGTGCACAGGAGCACCCAGGCAGCCAGCATCTGCAGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp CATGATGGCATACCTTGGCGGCCCGGCCCTTGTCCATaGAGGCTGGGTTCTGGCAGCGCAGTCCCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: HDGIPWRPGPCP*RLGSGSAVPSP
Trigger: AGGAGAAGGGACTGCGCTGCCAGAACCCAGCCTGCATGGACAAGGGCCGGGCCGCCAAGGTATGCCATCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp CCCCAGGCTCTACCACAACCATGGCCAGGGTCTCCGTaGAGCCATCTGAGGTGCAGTGCTCAGAGTCGAGGC +
Preference number: 6 (lower is better)
Translates to: PQALPQPWPGSP*SHLRCSAQSRG
Trigger: GCCTCGACTCTGAGCACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp GGTCTGAGGCACAGGCGCTGGCTCGACCACGGGGTGTaGAGCCACAAAGTCTTGAAGGGAAGTGGGGGACAG +
Preference number: 6 (lower is better)
Translates to: GLRHRRWLDHGV*SHKVLKGSGGQ
Trigger: CTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCCACACCCCGTGGTCGAGCCAGCGCCTGTGCCTCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp GGACCGGGTGGAAACATTCCGGGCCAGGACAGAGCCTaGCGGGGGCAGGTCAAATCGGACATGGCCGTCGTA +
Preference number: 6 (lower is better)
Translates to: GPGGNIPGQDRA*RGQVKSDMAVV
Trigger: TACGACGGCCATGTCCGATTTGACCTGCCCCCGCAAGGCTCTGTCCTGGCCCGGAATGTTTCCACCCGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp TGCTGGTGCTTCTCCGCCCACGTGACGTATGCCCGGAACAGATCGTaGTCACGCAGCAGGCCGCGCATGTACTCCATGCAGCCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: CWCFSAHVTYARNRS*SRSRPRMYSMQPSS
Trigger: AGAGGAGGGCTGCATGGAGTACATGCGCGGCCTGCTGCGTGACAACGATCTGTTCCGGGCATACGTCACGTGGGCGGAGAAGCACCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp GCGGCTGGGGTTCCTGACAGTAATTGTAAGAGGCTAGCCTCCGATTaGGACTTGAGCAGGCGGGGCGGGCGAGGGAGCAGCTGGACAGGA +
Preference number: 6 (lower is better)
Translates to: AAGVPDSNCKRLASD*DLSRRGGRGSSWTG
Trigger: TCCTGTCCAGCTGCTCCCTCGCCCGCCCCGCCTGCTCAAGTCCAAATCGGAGGCTAGCCTCTTACAATTACTGTCAGGAACCCCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS TCA 72 bp TCAGCCGCTGGCACTGCTGGTGCTTCTCCGCCCACGTaGCGTATGCCCGGAACAGATCGTTGTCACGCAGCA +
Preference number: 6 (lower is better)
Translates to: SAAGTAGASPPT*RMPGTDRCHAA
Trigger: TGCTGCGTGACAACGATCTGTTCCGGGCATACGTCACGTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS TCA 72 bp GGCCAGGGTCAGCTTCCTGTGTTGAGCAGAGACCCCTaGGGGAGGCTCAGACTGCACCCTGGACATAGTCCC +
Preference number: 6 (lower is better)
Translates to: GQGQLPVLSRDP*GRLRLHPGHSP
Trigger: GGGACTATGTCCAGGGTGCAGTCTGAGCCTCCCTCAGGGGTCTCTGCTCAACACAGGAAGCTGACCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS TCA 72 bp CCTCTGCAGGGCTCTGGTCTTCCCCCAAGTCCTCGATaGTGTCCAGAGCGGAGCTCCAGGAGAAGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: PLQGSGLPPSPR*CPERSSRRSAP
Trigger: TGGAGCGCTTCTCCTGGAGCTCCGCTCTGGACATCATCGAGGACTTGGGGGAAGACCAGAGCCCTGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239025.2
CDS GCA 72 bp GCTGGCAGACTGAGGGACTTGGAATCCTTCACTCCCTaGTCCACCTTGCCCTCGTCCCCCGGCTTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: AGRLRDLESFTP*STLPSSPGLAL
Trigger: CAAAGCCAAGCCGGGGGACGAGGGCAAGGTGGAGCAGGGAGTGAAGGATTCCAAGTCCCTCAGTCTGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp CCTCCTCCCAGGAGTCATGGTCAAAGCGCAGCCTCCTaGGCATCCGGGGTAGCCCGAAAAGGCTGTAGGCAT +
Preference number: 6 (lower is better)
Translates to: PPPRSHGQSAAS*ASGVARKGCRH
Trigger: ATGCCTACAGCCTTTTCGGGCTACCCCGGATGCCCAGGAGGCTGCGCTTTGACCATGACTCCTGGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp TGGGGCTTGGCCAGCATGTCACTCAGCTTCAGCCGCTaGCACTGCTGGTGCTTCTCCGCCCACGTGACGTAT +
Preference number: 6 (lower is better)
Translates to: WGLASMSLSFSR*HCWCFSAHVTY
Trigger: ATACGTCACGTGGGCGGAGAAGCACCAGCAGTGCCAGCGGCTGAAGCTGAGTGACATGCTGGCCAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp GGGAAGACAGTGTCGCCCCAGGCTCTACCACAACCATaGCCAGGGTCTCCGTGGAGCCATCTGAGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: GKTVSPQALPQP*PGSPWSHLRCS
Trigger: ACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGCCTGGGGCGACACTGTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp CCACGGGGTGTGGAGCCACAAAGTCTTGAAGGGAAGTaGGGGACAGGGTGCCATAGGCGGAGTCCATGGAGC +
Preference number: 6 (lower is better)
Translates to: PRGVEPQSLEGK*GTGCHRRSPWS
Trigger: GCTCCATGGACTCCGCCTATGGCACCCTGTCCCCCACTTCCCTTCAAGACTTTGTGGCTCCACACCCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp TCGTGTCCAGGGATGCCTGCCTCTCCCAGGAATTCAGACATGTTCTaGCGACGGCGGCCAGGGGCCAAGATGTCCAGACTGCTCTCTCGG +
Preference number: 6 (lower is better)
Translates to: SCPGMPASPRNSDMF*RRRPGAKMSRLLSR
Trigger: CCGAGAGAGCAGTCTGGACATCTTGGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAATTCCTGGGAGAGGCAGGCATCCCTGGACACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp GGGGTTCCTGACAGTAATTGTAAGAGGCTAGCCTCCGATTTGGACTaGAGCAGGCGGGGCGGGCGAGGGAGCAGCTGGACAGGAGTGCGA +
Preference number: 6 (lower is better)
Translates to: GVPDSNCKRLASDLD*SRRGGRGSSWTGVR
Trigger: TCGCACTCCTGTCCAGCTGCTCCCTCGCCCGCCCCGCCTGCTCAAGTCCAAATCGGAGGCTAGCCTCTTACAATTACTGTCAGGAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp GGATGCCTGCCTCTCCCAGGAATTCAGACATGTTCTTaGGACGGCGGCCAGGGGCCAAGATGTCCAGACTGC +
Preference number: 6 (lower is better)
Translates to: GCLPLPGIQTCS*DGGQGPRCPDC
Trigger: GCAGTCTGGACATCTTGGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAATTCCTGGGAGAGGCAGGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp CGGGCTGGAGCTGAAGAAGCCGCTGAAGCGACTGGCTaGCCGGTTCTTCCAGCTCTCATTGATGCCACTGCT +
Preference number: 6 (lower is better)
Translates to: RAGAEEAAEATG*PVLPALIDATA
Trigger: AGCAGTGGCATCAATGAGAGCTGGAAGAACCGGGCAGCCAGTCGCTTCAGCGGCTTCTTCAGCTCCAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp TGCCGCTCCTGCCGCTGCCGCATGCACGTGTTCACGTaGTGTATGAAGCGTTCCACCGAGCTGATCATGGTG +
Preference number: 6 (lower is better)
Translates to: CRSCRCRMHVFT*CMKRSTELIMV
Trigger: CACCATGATCAGCTCGGTGGAACGCTTCATACACCACGTGAACACGTGCATGCGGCAGCGGCAGGAGCGGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp GTGCTGTGGAACTTGCTATCACAGGTCTCACACAGGTaGAGAGGCCCCCGGTGGTGCAGCTGCTGGCAGTCG +
Preference number: 6 (lower is better)
Translates to: VLWNLLSQVSHR*RGPRWCSCWQS
Trigger: CGACTGCCAGCAGCTGCACCACCGGGGGCCTCTCAACCTGTGTGAGACCTGTGATAGCAAGTTCCACAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp GGGATGCCTGCCTCTCCCAGGAATTCAGACATGTTCTaGCGACGGCGGCCAGGGGCCAAGATGTCCAGACTG +
Preference number: 6 (lower is better)
Translates to: GMPASPRNSDMF*RRRPGAKMSRL
Trigger: CAGTCTGGACATCTTGGCCCCTGGCCGCCGTCGCAAGAACATGTCTGAATTCCTGGGAGAGGCAGGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp TTCTCCGCCCACGTGACGTATGCCCGGAACAGATCGTaGTCACGCAGCAGGCCGCGCATGTACTCCATGCAG +
Preference number: 6 (lower is better)
Translates to: FSAHVTYARNRS*SRSRPRMYSMQ
Trigger: CTGCATGGAGTACATGCGCGGCCTGCTGCGTGACAACGATCTGTTCCGGGCATACGTCACGTGGGCGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp TCCAGCACTGGCACCATCACGCTGCCCCACAAGCCGCGGTGTAGCTaGGCGATCTCAGGAATGTTGCTGAACAAGCGCTCAGCCTCAACC +
Preference number: 6 (lower is better)
Translates to: SSTGTITLPHKPRCS*AISGMLLNKRSAST
Trigger: GGTTGAGGCTGAGCGCTTGTTCAGCAACATTCCTGAGATCGCCAAGCTACACCGCGGCTTGTGGGGCAGCGTGATGGTGCCAGTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp TCCGGGGTAGCCCGAAAAGGCTGTAGGCATGGAGCTTaGTCTCCAGCTGTTCCATCTTGTCTACCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: SGVARKGCRHGA*SPAVPSCLPPG
Trigger: GCCGGGAGGTAGACAAGATGGAACAGCTGGAGAGCAAGCTCCATGCCTACAGCCTTTTCGGGCTACCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp CATCTGAGGTGCAGTGCTCAGAGTCGAGGCTGTTGCTaGTCTTTCGAAGGATGGTGGGGGAGCTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: HLRCSAQSRGCC*SFEGWWGSWQL
Trigger: CAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGAGCACTGCACCTCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp AGCCATCTGAGGTGCAGTGCTCAGAGTCGAGGCTGTTaGTGCTCTTTCGAAGGATGGTGGGGGAGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SHLRCSAQSRGC*CSFEGWWGSWQ
Trigger: CTGCCAGCTCCCCCACCATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGAGCACTGCACCTCAGATGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp CAACCATGGCCAGGGTCTCCGTGGAGCCATCTGAGGTaGAGTGCTCAGAGTCGAGGCTGTTGCTGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: QPWPGSPWSHLR*SAQSRGCCCSF
Trigger: GAAAGAGCAGCAACAGCCTCGACTCTGAGCACTGCACCTCAGATGGCTCCACGGAGACCCTGGCCATGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp ACTTCTGTGTGGAGGAGTTCCCACACTGCCTCCTGTTaGTGGCACTGCCGCCTGGTCAGCTTCTCATGCCCA +
Preference number: 6 (lower is better)
Translates to: TSVWRSSHTASC*WHCRLVSFSCP
Trigger: TGGGCATGAGAAGCTGACCAGGCGGCAGTGCCACCAACAGGAGGCAGTGTGGGAACTCCTCCACACAGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp GCTCAGAGTCGAGGCTGTTGCTGCTCTTTCGAAGGATaGTGGGGGAGCTGGCAGCTGAGGTACCGCTCTCTT +
Preference number: 6 (lower is better)
Translates to: AQSRGCCCSFEG*WGSWQLRYRSL
Trigger: AAGAGAGCGGTACCTCAGCTGCCAGCTCCCCCACCATCCTTCGAAAGAGCAGCAACAGCCTCGACTCTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp GGCACCATCACGCTGCCCCACAAGCCGCGGTGTAGCTaGGCGATCTCAGGAATGTTGCTGAACAAGCGCTCA +
Preference number: 6 (lower is better)
Translates to: GTITLPHKPRCS*AISGMLLNKRS
Trigger: TGAGCGCTTGTTCAGCAACATTCCTGAGATCGCCAAGCTACACCGCGGCTTGTGGGGCAGCGTGATGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp GACAGTAATTGTAAGAGGCTAGCCTCCGATTTGGACTaGAGCAGGCGGGGCGGGCGAGGGAGCAGCTGGACA +
Preference number: 6 (lower is better)
Translates to: DSNCKRLASDLD*SRRGGRGSSWT
Trigger: TGTCCAGCTGCTCCCTCGCCCGCCCCGCCTGCTCAAGTCCAAATCGGAGGCTAGCCTCTTACAATTACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp GTTCCTGACAGTAATTGTAAGAGGCTAGCCTCCGATTaGGACTTGAGCAGGCGGGGCGGGCGAGGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: VPDSNCKRLASD*DLSRRGGRGSS
Trigger: GCTGCTCCCTCGCCCGCCCCGCCTGCTCAAGTCCAAATCGGAGGCTAGCCTCTTACAATTACTGTCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp ATGAGGAGGAAGGAACCAGGGTCCCGAAGTTCCCGGCACACAATCTaGTCCACCAGTAGCGGTGGCCTGATGACCTTCGTCCTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: MRRKEPGSRSSRHTI*STSSGGLMTFVLSA
Trigger: AGCAGAGAGGACGAAGGTCATCAGGCCACCGCTACTGGTGGACAAGATTGTGTGCCGGGAACTTCGGGACCCTGGTTCCTTCCTCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS TCA 72 bp AGGCCCCCACAGCACTGTGGAATTCATTCAGGTAGATaGGGAGGAAGGAACCAGGGTCCCGAAGTTCCCGGC +
Preference number: 6 (lower is better)
Translates to: RPPQHCGIHSGR*GGRNQGPEVPG
Trigger: GCCGGGAACTTCGGGACCCTGGTTCCTTCCTCCTCATCTACCTGAATGAATTCCACAGTGCTGTGGGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp GATGTAGGAGACTTCTGTGTGGAGGAGTTCCCACACTaGCTCCTGTTGGTGGCACTGCCGCCTGGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: DVGDFCVEEFPH*LLLVALPPGQL
Trigger: AAGCTGACCAGGCGGCAGTGCCACCAACAGGAGGCAGTGTGGGAACTCCTCCACACAGAAGTCTCCTACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp AAGGAACCAGGGTCCCGAAGTTCCCGGCACACAATCTaGTCCACCAGTAGCGGTGGCCTGATGACCTTCGTC +
Preference number: 6 (lower is better)
Translates to: KEPGSRSSRHTI*STSSGGLMTFV
Trigger: GACGAAGGTCATCAGGCCACCGCTACTGGTGGACAAGATTGTGTGCCGGGAACTTCGGGACCCTGGTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp TATGGCTTGAAGAGTGAGCCGAACATCTTGAAGCCTTaGAGAAAGTCGCTGGGCTGCAGCAGCGCCCGCGTC +
Preference number: 6 (lower is better)
Translates to: YGLKSEPNILKP*RKSLGCSSARV
Trigger: GACGCGGGCGCTGCTGCAGCCCAGCGACTTTCTCAAAGGCTTCAAGATGTTCGGCTCACTCTTCAAGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp CGTTCCACCGAGCTGATCATGGTGACGATGGCTTCCTaGGTGCGGGGATCATCTGTCTTCCTTAGCACCGAC +
Preference number: 6 (lower is better)
Translates to: RSTELIMVTMAS*VRGSSVFLSTD
Trigger: GTCGGTGCTAAGGAAGACAGATGATCCCCGCACCAAGGAAGCCATCGTCACCATGATCAGCTCGGTGGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp TCCAAACCTGTAGGCCTCGAAGGTGAGGGACAGGGGTGTGTTGGATaGATCCAGGTAGATGTCTACCTTGCCCAGTGCGATGCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: SKPVGLEGEGQGCVG*IQVDVYLAQCDALP
Trigger: AGGAAGGGCATCGCACTGGGCAAGGTAGACATCTACCTGGATCAATCCAACACACCCCTGTCCCTCACCTTCGAGGCCTACAGGTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS TCA 72 bp GCAGGTAGTGTCCTCCAAACCTGTAGGCCTCGAAGGTaGGGGACAGGGGTGTGTTGGATTGATCCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: AGSVLQTCRPRR*GTGVCWIDPGR
Trigger: TCTACCTGGATCAATCCAACACACCCCTGTCCCTCACCTTCGAGGCCTACAGGTTTGGAGGACACTACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS TCA 72 bp GTCATGTGGCTAGGTCTGTTCTCAGATTCTGACAACTaGGGGCCATGGCAGGGGTCACACATCCCTGGACCA +
Preference number: 6 (lower is better)
Translates to: VMWLGLFSDSDN*GPWQGSHIPGP
Trigger: TGGTCCAGGGATGTGTGACCCCTGCCATGGCCCTCAGTTGTCAGAATCTGAGAACAGACCTAGCCACATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp GCAGGTCAAATCGGACATGGCCGTCGTAGTGCAGGGTaGTGTGGAACTTGCTATCACAGGTCTCACACAGGT +
Preference number: 6 (lower is better)
Translates to: AGQIGHGRRSAG*CGTCYHRSHTG
Trigger: ACCTGTGTGAGACCTGTGATAGCAAGTTCCACAGCACCCTGCACTACGACGGCCATGTCCGATTTGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp GATCGTTGTCACGCAGCAGGCCGCGCATGTACTCCATaGAGCCCTCCTCTTCCATACAGTATCGGATGTATG +
Preference number: 6 (lower is better)
Translates to: DRCHAAGRACTP*SPPLPYSIGCM
Trigger: CATACATCCGATACTGTATGGAAGAGGAGGGCTGCATGGAGTACATGCGCGGCCTGCTGCGTGACAACGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp GAAATTCCTTCAGGAGCTTATCCACCTCGTCGTTGCTaGCCTCCACAACCTCGTAGGCATCGATCCGGCTCA +
Preference number: 6 (lower is better)
Translates to: EIPSGAYPPRRC*PPQPRRHRSGS
Trigger: TGAGCCGGATCGATGCCTACGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATAAGCTCCTGAAGGAATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp GTAGAAATTCCTTCAGGAGCTTATCCACCTCGTCGTTaGTGCCCTCCACAACCTCGTAGGCATCGATCCGGC +
Preference number: 6 (lower is better)
Translates to: VEIPSGAYPPRR*CPPQPRRHRSG
Trigger: GCCGGATCGATGCCTACGAGGTTGTGGAGGGCAGCAACGACGAGGTGGATAAGCTCCTGAAGGAATTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CCA 72 bp GCAGCTGTCGGGTCTCTTCAGGGGAGGTTCCAGGCATaGGTGCTGTCAGGTCCAGATGTAGAAATTCCTTCA +
Preference number: 6 (lower is better)
Translates to: AAVGSLQGRFQA*VLSGPDVEIPS
Trigger: TGAAGGAATTTCTACATCTGGACCTGACAGCACCCATGCCTGGAACCTCCCCTGAAGAGACCCGACAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp GTAGGCCTCGAAGGTGAGGGACAGGGGTGTGTTGGATaGATCCAGGTAGATGTCTACCTTGCCCAGTGCGAT +
Preference number: 6 (lower is better)
Translates to: VGLEGEGQGCVG*IQVDVYLAQCD
Trigger: ATCGCACTGGGCAAGGTAGACATCTACCTGGATCAATCCAACACACCCCTGTCCCTCACCTTCGAGGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp TGTATGAAGCGTTCCACCGAGCTGATCATGGTGACGATGGCTTCCTaGGTGCGGGGATCATCTGTCTTCCTTAGCACCGACTTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: CMKRSTELIMVTMAS*VRGSSVFLSTDLSS
Trigger: GCTGCTCAAGTCGGTGCTAAGGAAGACAGATGATCCCCGCACCAAGGAAGCCATCGTCACCATGATCAGCTCGGTGGAACGCTTCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp GGGGTGTGTTGGATTGATCCAGGTAGATGTCTACCTTaGCCAGTGCGATGCCCTTCCTCTCAAACACAGGCA +
Preference number: 6 (lower is better)
Translates to: GVCWIDPGRCLP*PVRCPSSQTQA
Trigger: TGCCTGTGTTTGAGAGGAAGGGCATCGCACTGGGCAAGGTAGACATCTACCTGGATCAATCCAACACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp ATTGATCCAGGTAGATGTCTACCTTGCCCAGTGCGATaGCCTTCCTCTCAAACACAGGCAGCAGTACTTCCC +
Preference number: 6 (lower is better)
Translates to: IDPGRCLPCPVR*PSSQTQAAVLP
Trigger: GGGAAGTACTGCTGCCTGTGTTTGAGAGGAAGGGCATCGCACTGGGCAAGGTAGACATCTACCTGGATCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS GCA 72 bp GTTGGATTGATCCAGGTAGATGTCTACCTTGCCCAGTaGGATGCCCTTCCTCTCAAACACAGGCAGCAGTAC +
Preference number: 6 (lower is better)
Translates to: VGLIQVDVYLAQ*DALPLKHRQQY
Trigger: GTACTGCTGCCTGTGTTTGAGAGGAAGGGCATCGCACTGGGCAAGGTAGACATCTACCTGGATCAATCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS TCA 72 bp CTGTTTCGATGTCCACGTTCAGGTCGAATTTCAAGGTaGAGCACTCCTTGCTCGGGTCATCTGTGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: LFRCPRSGRISR*STPCSGHLCVS
Trigger: GGAGACACACAGATGACCCGAGCAAGGAGTGCTTCACCTTGAAATTCGACCTGAACGTGGACATCGAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 90 bp TACTCCATGCAGCCCTCCTCTTCCATACAGTATCGGATGTATGGCTaGAAGAGTGAGCCGAACATCTTGAAGCCTTTGAGAAAGTCGCTG +
Preference number: 6 (lower is better)
Translates to: YSMQPSSSIQYRMYG*KSEPNILKPLRKSL
Trigger: CAGCGACTTTCTCAAAGGCTTCAAGATGTTCGGCTCACTCTTCAAGCCATACATCCGATACTGTATGGAAGAGGAGGGCTGCATGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS CAA 72 bp CAGCCCTCCTCTTCCATACAGTATCGGATGTATGGCTaGAAGAGTGAGCCGAACATCTTGAAGCCTTTGAGA +
Preference number: 6 (lower is better)
Translates to: QPSSSIQYRMYG*KSEPNILKPLR
Trigger: TCTCAAAGGCTTCAAGATGTTCGGCTCACTCTTCAAGCCATACATCCGATACTGTATGGAAGAGGAGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2
CDS TCA 72 bp CTCTTCCATACAGTATCGGATGTATGGCTTGAAGAGTaGGCCGAACATCTTGAAGCCTTTGAGAAAGTCGCT +
Preference number: 6 (lower is better)
Translates to: LFHTVSDVWLEE*AEHLEAFEKVA
Trigger: AGCGACTTTCTCAAAGGCTTCAAGATGTTCGGCTCACTCTTCAAGCCATACATCCGATACTGTATGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000084115.4
ENSMUST00000105661.10
ENSMUST00000105662.8
ENSMUST00000118648.8
ENSMUST00000239025.2