Pregenerated sensors for PLEKHD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066438Ensembl transcript IDs: ENSMUST00000140770.2, ENSMUST00000142760.2
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CCGCCCGCATCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATTaGGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGAA | + |
Preference number: 1 (lower is better) Translates to: PPASVLPSPCSEPWN*GLVPGSARPPLPPE Trigger: TTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGATGCGGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR GCA 90 bp | AACCTTGGAATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTaGCTCCCGAAGCCGCCTCTCAAGGTCCATGCGTACTTTCACTTC | + |
Preference number: 1 (lower is better) Translates to: NLGIEALFQAPQGRL*LPKPPLKVHAYFHF Trigger: GAAGTGAAAGTACGCATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR TCA 90 bp | ACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGTaGATAGGAGGCCTGGGTGGCCTTACAGCCAGGACAGCCCCCAGG | + |
Preference number: 1 (lower is better) Translates to: TLQQVAGAIYGETHL*IGGLGGLTARTAPR Trigger: CCTGGGGGCTGTCCTGGCTGTAAGGCCACCCAGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 90 bp | ACCGGAGCTTCTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTaGGGTCAAGGACTCTCAATCGGGGCTGGAAAAGAACAAAGTGGG | + |
Preference number: 1 (lower is better) Translates to: TGASSRSGCADFGKP*GQGLSIGAGKEQSG Trigger: CCCACTTTGTTCTTTTCCAGCCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAGAAGCTCCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 90 bp | CCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATaGAGAAACCCATTTGTGAATAGGAGGCCTGGGTGGCCTTACAGC | + |
Preference number: 1 (lower is better) Translates to: PTLLLHPPAGCWSYI*RNPFVNRRPGWPYS Trigger: GCTGTAAGGCCACCCAGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 90 bp | AAGACTGTCACAGATAAGGAGCACACGCCTCAGTCCTTGGCCTCCTaGAGGGTAGTGGTCTTCCATAAAACCCGCAGGCTGGTGTTACAG | + |
Preference number: 1 (lower is better) Translates to: KTVTDKEHTPQSLAS*RVVVFHKTRRLVLQ Trigger: CTGTAACACCAGCCTGCGGGTTTTATGGAAGACCACTACCCTTCAGGAGGCCAAGGACTGAGGCGTGTGCTCCTTATCTGTGACAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 90 bp | CTCCAGAGCCCGAGAGCGTTCCTCATTCTCCTTCATCCCGTGTCGTaGATGACAGCTAGAACTCAAGCCCAGCTATCTAACTCGAAGGCA | + |
Preference number: 1 (lower is better) Translates to: LQSPRAFLILLHPVS*MTARTQAQLSNSKA Trigger: TGCCTTCGAGTTAGATAGCTGGGCTTGAGTTCTAGCTGTCATTCACGACACGGGATGAAGGAGAATGAGGAACGCTCTCGGGCTCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR CCA 90 bp | AGGGTAGACCCAAAGTCAGGGCTCGGGCATGGAGAGATGGCTCAGTaGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGTTTGATT | + |
Preference number: 1 (lower is better) Translates to: RVDPKSGLGHGEMAQ*LRALVALPGDPGLI Trigger: AATCAAACCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCCTGACTTTGGGTCTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 90 bp | AGAGCCCGAGAGCGTTCCTCATTCTCCTTCATCCCGTGTCGTGAATaGCAGCTAGAACTCAAGCCCAGCTATCTAACTCGAAGGCAGACA | + |
Preference number: 1 (lower is better) Translates to: RARERSSFSFIPCRE*QLELKPSYLTRRQT Trigger: TGTCTGCCTTCGAGTTAGATAGCTGGGCTTGAGTTCTAGCTGTCATTCACGACACGGGATGAAGGAGAATGAGGAACGCTCTCGGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR CCA 90 bp | ATCTTCTTGACCAACAGATATACCACACAGAGCCAGGCCTCATCATaGCAACTAGGTAGCACCCAGTGTGGACCCACCTCACCTAGGGTA | + |
Preference number: 1 (lower is better) Translates to: IFLTNRYTTQSQASS*QLGSTQCGPTSPRV Trigger: TACCCTAGGTGAGGTGGGTCCACACTGGGTGCTACCTAGTTGCCATGATGAGGCCTGGCTCTGTGTGGTATATCTGTTGGTCAAGAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 90 bp | ACAAAGTGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTaGAGCTATATATGGAGAAACCCATTTGTGAATAGGAGGCCTGGG | + |
Preference number: 1 (lower is better) Translates to: TKWDPTLLLHPPAGC*SYIWRNPFVNRRPG Trigger: CCCAGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 90 bp | GAGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTaGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGG | + |
Preference number: 1 (lower is better) Translates to: ECPVPVKVRRRCWIS*QMKSHMVGFELPCG Trigger: CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 90 bp | AAGGTGTTGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTaGGCTACCATGTGGGTGCTGGGAACCAAGTCTGGGTGCCCCGAA | + |
Preference number: 1 (lower is better) Translates to: KVLDLLANEVTYGWF*ATMWVLGTKSGCPE Trigger: TTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR GCA 90 bp | TCAATCGGGGCTGGAAAAGAACAAAGTGGGATCCCACACTTCTCCTaGACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCAT | + |
Preference number: 1 (lower is better) Translates to: SIGAGKEQSGIPHFS*TLQQVAGAIYGETH Trigger: ATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGTTCTTTTCCAGCCCCGATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR GCA 90 bp | AGAACAAAGTGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTaGTGGAGCTATATATGGAGAAACCCATTTGTGAATAGGAGGCCT | + |
Preference number: 1 (lower is better) Translates to: RTKWDPTLLLHPPAG*WSYIWRNPFVNRRP Trigger: AGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 90 bp | ATATGGTTGGTTTTGAGCTACCATGTGGGTGCTGGGAACCAAGTCTaGGTGCCCCGAAAGAGAGAAACAAGTGCTCTTAACCACTGTCCA | + |
Preference number: 1 (lower is better) Translates to: IWLVLSYHVGAGNQV*VPRKRETSALNHCP Trigger: TGGACAGTGGTTAAGAGCACTTGTTTCTCTCTTTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 90 bp | GTACCATGTGAGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTaGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTA | + |
Preference number: 1 (lower is better) Translates to: VPCECPVPVKVRRRC*ISWQMKSHMVGFEL Trigger: TAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTCACATGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 90 bp | GTAAGTGTATGGATGTTTTGTCTGCATGTATGTACATGTACCATGTaGGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTC | + |
Preference number: 1 (lower is better) Translates to: VSVWMFCLHVCTCTM*VPGACEGQEKVLDL Trigger: GAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTCACATGGTACATGTACATACATGCAGACAAAACATCCATACACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 90 bp | ACCTGGGGTTATATCTTAGAGCCTCCTTTTCCCTCTCCAAGAACATaGAATAAGTGCAGGGCATGGACAAATGTTGTACTGGAGGATCAG | + |
Preference number: 1 (lower is better) Translates to: TWGYILEPPFPSPRT*NKCRAWTNVVLEDQ Trigger: CTGATCCTCCAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTGGAGAGGGAAAAGGAGGCTCTAAGATATAACCCCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 90 bp | CCAGAGGAACTATTCAGTCCTCATGGAACAGACAATTTATCTTCTTaGCCAACAGATATACCACACAGAGCCAGGCCTCATCATGGCAAC | + |
Preference number: 1 (lower is better) Translates to: PEELFSPHGTDNLSS*PTDIPHRARPHHGN Trigger: GTTGCCATGATGAGGCCTGGCTCTGTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGTTCCTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 90 bp | TCACCGAGGGGTATGGTAGGTACCAGAGGAACTATTCAGTCCTCATaGAACAGACAATTTATCTTCTTGACCAACAGATATACCACACAG | + |
Preference number: 1 (lower is better) Translates to: SPRGMVGTRGTIQSS*NRQFIFLTNRYTTQ Trigger: CTGTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGTTCCTCTGGTACCTACCATACCCCTCGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR TCA 90 bp | TCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGAAGCCGCCTCTCAAGGTCCATGGCTGCTTCTCTGCAGTaGGCTCCTGCAGCGAGTTCT | + |
Preference number: 2 (lower is better) Translates to: SRLRKAASASRSRLSRSMAASLQ*APAASS Trigger: AGAACTCGCTGCAGGAGCTCACTGCAGAGAAGCAGC...CATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR-3UTR GCA 90 bp | CTTGGAATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGAAGCGCCTGCTGCTTCTCTaGAGTGAGCTCCTGCAGCGA | + |
Preference number: 2 (lower is better) Translates to: LGIEALFQAPQGRLCLPKRLLLL*SELLQR Trigger: TCGCTGCAGGAGCTCACTGCAGAGAAGCAGCAGGCG...CTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR CAA 90 bp | TCCGCCCGCATCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATaGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGA | + |
Preference number: 2 (lower is better) Translates to: SARIRSSFSLFRTLE*RPCSRLRKAASASR Trigger: TCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGATGCGGGCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR CAA 90 bp | CTCACGTCCGCCCGCATCCGTTCTTCCTTCTCCTTGTTCCGAACCTaGGAATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCC | + |
Preference number: 2 (lower is better) Translates to: LTSARIRSSFSLFRT*ELRPCSRLRKAASA Trigger: GGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGATGCGGGCGGACGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR-3UTR TCA 90 bp | CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAAGGTCAGGGCTCTGGGTaGGGCAGAGGGGGTATCGCC | + |
Preference number: 2 (lower is better) Translates to: LPDLAVRTLGNPGVKDSQGQGSG*GRGGIA Trigger: GGCGATACCCCCTCTGCCTCACCCAGAGCCCTGACC...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR GCA 90 bp | CCGGATGCACTCCTCGAAGAACCTTTTCAGGTGGCTCACGTCCGCCCGCATCCGTCTGCAGTGAGCTCCTaGAGCGAGTTCTGCAGGGCT | + |
Preference number: 2 (lower is better) Translates to: PDALLEEPFQVAHVRPHPSAVSS*SEFCRA Trigger: AGCCCTGCAGAACTCGCTGCAGGAGCTCACTGCAGA...CGGATGCGGGCGGACGTGAGCCACCTGAAAAGGTTCTTCGAGGAGTGCATCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR-3UTR GCA 90 bp | GCCGCCTCTGCCTCCCGAAGCCGCCTCTCAAGGTCCATGCGTACTTTCACTTCAAGTTCCCGCTCCGCCTaGTGCTTCTCTGCAGTGAGC | + |
Preference number: 2 (lower is better) Translates to: AASASRSRLSRSMRTFTSSSRSA*CFSAVS Trigger: GCTCACTGCAGAGAAGCAGCAGGCGGAGCGGGAACT...TGAAGTGAAAGTACGCATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR CAA 90 bp | CATCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATTGAGGCCTaGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGAAGCCGCCT | + |
Preference number: 2 (lower is better) Translates to: HPFFLLLVPNLGIEA*FQAPQGRLCLPKPP Trigger: AGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR-3UTR GCA 90 bp | GCCGCCTCTGCCTCCCGAAGCCGCCTCTCAAGGTCCATGCGTACTTTCACTTCATCCTGCAGCGAGTTCTaGAGGGCTTGGGACTGGCTT | + |
Preference number: 2 (lower is better) Translates to: AASASRSRLSRSMRTFTSSCSEF*RAWDWL Trigger: AAGCCAGTCCCAAGCCCTGCAGAACTCGCTGCAGGA...TGAAGTGAAAGTACGCATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR-3UTR GCA 90 bp | GGGCTCGGGCATGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGGCGTCAGACCTCCCTaGTGCCCCACCAAGGAAAGA | + |
Preference number: 2 (lower is better) Translates to: GLGHGEMAQWLRALVALPGVRPP*CPTKER Trigger: TCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCC...TGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR GCA 90 bp | GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCAGCCCCCAGGAATACTaGAGAGAGGGTGTGGGGTGC | + |
Preference number: 2 (lower is better) Translates to: VETDRLRQLLRDGPQKTVSPQEY*REGVGC Trigger: GCACCCCACACCCTCTCTGCAGTATTCCTGGGGGCT...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR TCA 90 bp | TTGTTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGGAGGAGGCAGCAAGGTaGGCCAGCTGGGAGAGAGAC | + |
Preference number: 2 (lower is better) Translates to: LFVETDRLRQLLRDGPQKEEAAR*ASWERD Trigger: GTCTCTCTCCCAGCTGGCTCACCTTGCTGCCTCCTC...CTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR TCA 90 bp | GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCCAGTCCTTGGCCTCCTaGAGGGTAGTGGTCTTCCAT | + |
Preference number: 2 (lower is better) Translates to: VETDRLRQLLRDGPQKTVQSLAS*RVVVFH Trigger: ATGGAAGACCACTACCCTTCAGGAGGCCAAGGACTG...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR GCA 90 bp | TTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTAGAGAGACAGACCTCTaGGCTCTCAGGGCAGCAGGG | + |
Preference number: 2 (lower is better) Translates to: FVETDRLRQLLRDGPQKTRETDL*ALRAAG Trigger: CCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCT...AGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR CCA 90 bp | GGTTCTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGCATGTGGTGGGTTCCTaGCTGCATTGGTCCACTGAG | + |
Preference number: 2 (lower is better) Translates to: GSSTGLLPSLPQDASVFWHVVGS*LHWSTE Trigger: CTCAGTGGACCAATGCAGCCAGGAACCCACCACATG...CCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR GCA 90 bp | GGTTCTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGTTCCAGATCTGGCTGTaGGGACTTTGGGAAACCCTG | + |
Preference number: 2 (lower is better) Translates to: GSSTGLLPSLPQDASVFWFQIWL*GLWETL Trigger: CAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAA...CCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR TCA 90 bp | AGAGAGAAACAAGTGCTCTTAACCACTGTCCACATCTCCGCCCCCTCCCCAAGTCCCAATATTCTCTTCTaGCCTCCAAGGTCAGGGCTC | + |
Preference number: 2 (lower is better) Translates to: REKQVLLTTVHISAPSPSPNILF*PPRSGL Trigger: GAGCCCTGACCTTGGAGGTCAGAAGAGAATATTGGG...ACTTGGGGAGGGGGCGGAGATGTGGACAGTGGTTAAGAGCACTTGTTTCTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CAA 90 bp | GCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGTTaGATTTCCAGCACCCACACGGTAGCTTACAACCATCCACGACTC | + |
Preference number: 2 (lower is better) Translates to: AQWLRALVALPGDPG*ISSTHTVAYNHPRL Trigger: GAGTCGTGGATGGTTGTAAGCTACCGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR GCA 90 bp | GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCACATGAGCTACCATGTGGGTaGTGGGAACCAAGTCTGGGT | + |
Preference number: 2 (lower is better) Translates to: VPVKVRRRCWISWQMKSHELPCG*WEPSLG Trigger: ACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTC...ATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR CCA 90 bp | CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGTGCTGGAGCTATATATaGAGAAACCCATTTGTGAAT | + |
Preference number: 2 (lower is better) Translates to: PAGRETDLCALRAAGSQQCWSYI*RNPFVN Trigger: ATTCACAAATGGGTTTCTCCATATATAGCTCCAGCA...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR CCA 90 bp | GGTTCTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGATAAAACCCGCAGGCTaGTGTTACAGTGTCACTCTG | + |
Preference number: 2 (lower is better) Translates to: GSSTGLLPSLPQDASVFWIKPAG*CYSVTL Trigger: CAGAGTGACACTGTAACACCAGCCTGCGGGTTTTAT...CCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR CCA 90 bp | GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCCTACCATGTGGGTGCTaGGAACCAAGTCTGGGTGCC | + |
Preference number: 2 (lower is better) Translates to: VPSSRCFSLLDRKWMPLILPCGC*EPSLGA Trigger: GGCACCCAGACTTGGTTCCCAGCACCCACATGGTAG...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR GCA 90 bp | CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGATCCCACACTTCTCCTaGACCCTCCAGCAGGTTGCT | + |
Preference number: 2 (lower is better) Translates to: LKMLQSSGQKMDAFDLALIPHFS*TLQQVA Trigger: AGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGAT...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR CCA 90 bp | TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGCATGTTCCCATGTGGTaGGTTCCTGGCTGCATTGGT | + |
Preference number: 2 (lower is better) Translates to: WISWQMKSHMVGFELPCGHVPMW*VPGCIG Trigger: ACCAATGCAGCCAGGAACCCACCACATGGGAACATG...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR TCA 90 bp | CTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGGACAATTTATCTTCTTaGCCAACAGATATACCACAC | + |
Preference number: 2 (lower is better) Translates to: LPRGYFRPFLKMLQSSGQDNLSS*PTDIPH Trigger: GTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTC...CTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CAA 90 bp | TTCCCTCTCCAAGAACATGGAATAAGTGCAGGGCATGGACAAATGTaGTACTGGAGGATCAGGAACGAAGAGAGAGTTAGGGGGTGTTAT | + |
Preference number: 2 (lower is better) Translates to: FPLQEHGISAGHGQM*YWRIRNEERVRGCY Trigger: ATAACACCCCCTAACTCTCTCTTCGTTCCTGATCCTCCAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTGGAGAGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR-3UTR CCA 90 bp | CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGGGAGAGATGGCTCAGTaGTTAAGAGCACTTGTTGCT | + |
Preference number: 2 (lower is better) Translates to: LKMLQSSGQKMDAFDLALGEMAQ*LRALVA Trigger: AGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCC...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR CAA 90 bp | ACCAGAGGAACTATTCAGTCCTCATGGAACAGACAATTTATCTTCTaGACCAACAGATATACCACACAGAGCCAGGCCTCATCATGGCAA | + |
Preference number: 2 (lower is better) Translates to: TRGTIQSSWNRQFIF*TNRYTTQSQASSWQ Trigger: TTGCCATGATGAGGCCTGGCTCTGTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGTTCCTCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR-3UTR TCA 90 bp | TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGGTTACAGTGTCACTCTaGCAATGCTCTACCAAACAA | + |
Preference number: 2 (lower is better) Translates to: WISWQMKSHMVGFELPCGVTVSL*QCSTKQ Trigger: TTGTTTGGTAGAGCATTGTCAGAGTGACACTGTAAC...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR-3UTR CCA 90 bp | TTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTACTATTCAGTCCTCATaGAACAGACAATTTATCTTC | + |
Preference number: 2 (lower is better) Translates to: FVETDRLRQLLRDGPQKTTIQSS*NRQFIF Trigger: GAAGATAAATTGTCTGTTCCATGAGGACTGAATAGT...AGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 72 bp | GAGAATGAGGGTGCCCCCTCACACCCAGCAGTGCTCTaGTGGAGAAGACCCAGGGGCGTCAGACCTCCCTGC | + |
Preference number: 3 (lower is better) Translates to: ENEGAPSHPAVL*WRRPRGVRPPC Trigger: GCAGGGAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGCTGGGTGTGAGGGGGCACCCTCATTCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR GCA 72 bp | CCTTCGAGAATGAGGGTGCCCCCTCACACCCAGCAGTaGTCTGGTGGAGAAGACCCAGGGGCGTCAGACCTC | + |
Preference number: 3 (lower is better) Translates to: PSRMRVPPHTQQ*SGGEDPGASDL Trigger: GAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGCTGGGTGTGAGGGGGCACCCTCATTCTCGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR GCA 72 bp | ATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTaGCTCCCGAAGCCGCCTCTCAAGGTCCATGCGTAC | + |
Preference number: 3 (lower is better) Translates to: IEALFQAPQGRL*LPKPPLKVHAY Trigger: GTACGCATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
||
3UTR-3UTR CAA 90 bp | AACCTTGGAATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGGGGCTTGGGACTGGCTaGAGTAGAATTCCCGTTCCT | + |
Preference number: 3 (lower is better) Translates to: NLGIEALFQAPQGRLCLPGLGTG*SRIPVP Trigger: AGGAACGGGAATTCTACTCAAGCCAGTCCCAAGCCC...CGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
||
3UTR TCA 72 bp | CTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGGCCTaGCTGTGGGTAACACCGGAGCTTCTTCCAGATCTG | + |
Preference number: 3 (lower is better) Translates to: LCALRAAGSQQA*LWVTPELLPDL Trigger: CAGATCTGGAAGAAGCTCCGGTGTTACCCACAGTCAGGCCTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR CCA 72 bp | CACCGGAGCTTCTTCCAGATCTGGCTGTGCGGACTTTaGGAAACCCTGGGGTCAAGGACTCTCAATCGGGGC | + |
Preference number: 3 (lower is better) Translates to: HRSFFQIWLCGL*ETLGSRTLNRG Trigger: GCCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAGAAGCTCCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR-3UTR CAA 90 bp | GATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCGGGGCCAGGAGACCCAGGTTaGATTTCCAGCACCCACACG | + |
Preference number: 3 (lower is better) Translates to: DLAVRTLGNPGVKDSQSGPGDPG*ISSTHT Trigger: CGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGG...CCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR CCA 72 bp | GCATTCCGGATGCACTCCTCGAAGAACCTTTTCAGGTaGCTCACGTCCGCCCGCATCCGTTCTTCCTTCTCC | + |
Preference number: 3 (lower is better) Translates to: AFRMHSSKNLFR*LTSARIRSSFS Trigger: GGAGAAGGAAGAACGGATGCGGGCGGACGTGAGCCACCTGAAAAGGTTCTTCGAGGAGTGCATCCGGAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
||
3UTR TCA 72 bp | TCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATTaGGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTG | + |
Preference number: 3 (lower is better) Translates to: SVLPSPCSEPWN*GLVPGSARPPL Trigger: CAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
||
3UTR TCA 72 bp | ACAGATAAGGAGCACACGCCTCAGTCCTTGGCCTCCTaGAGGGTAGTGGTCTTCCATAAAACCCGCAGGCTG | + |
Preference number: 3 (lower is better) Translates to: TDKEHTPQSLAS*RVVVFHKTRRL Trigger: CAGCCTGCGGGTTTTATGGAAGACCACTACCCTTCAGGAGGCCAAGGACTGAGGCGTGTGCTCCTTATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR CCA 72 bp | CCAAAGTCAGGGCTCGGGCATGGAGAGATGGCTCAGTaGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCA | + |
Preference number: 3 (lower is better) Translates to: PKSGLGHGEMAQ*LRALVALPGDP Trigger: TGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCCTGACTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR-3UTR CAA 90 bp | GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCACATCTGGCTGTGCGGACTTaGGGAAACCCTGGGGTCAAG | + |
Preference number: 3 (lower is better) Translates to: VPVKVRRRCWISWQMKSHLAVRT*GNPGVK Trigger: CTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAG...ATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR CCA 72 bp | ATATGGAGAAACCCATTTGTGAATAGGAGGCCTGGGTaGCCTTACAGCCAGGACAGCCCCCAGGAATACTGC | + |
Preference number: 3 (lower is better) Translates to: IWRNPFVNRRPG*PYSQDSPQEYC Trigger: GCAGTATTCCTGGGGGCTGTCCTGGCTGTAAGGCCACCCAGGCCTCCTATTCACAAATGGGTTTCTCCATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR CCA 72 bp | TCAAGGACTCTCAATCGGGGCTGGAAAAGAACAAAGTaGGATCCCACACTTCTCCTGCACCCTCCAGCAGGT | + |
Preference number: 3 (lower is better) Translates to: SRTLNRGWKRTK*DPTLLLHPPAG Trigger: ACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGTTCTTTTCCAGCCCCGATTGAGAGTCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR CCA 72 bp | TCTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTaGGGTCAAGGACTCTCAATCGGGGCTGGAAAAGAA | + |
Preference number: 3 (lower is better) Translates to: SSRSGCADFGKP*GQGLSIGAGKE Trigger: TTCTTTTCCAGCCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 72 bp | GAGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTaGATCTCCTGGCAAATGAAGTCACATATGGTTGGT | + |
Preference number: 3 (lower is better) Translates to: ECPVPVKVRRRC*ISWQMKSHMVG Trigger: ACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR TCA 72 bp | CAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGTaGATAGGAGGCCTGGGTGGCCTTACAGCCAGGACA | + |
Preference number: 3 (lower is better) Translates to: QVAGAIYGETHL*IGGLGGLTART Trigger: TGTCCTGGCTGTAAGGCCACCCAGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 72 bp | CCGAGAGCGTTCCTCATTCTCCTTCATCCCGTGTCGTaGATGACAGCTAGAACTCAAGCCCAGCTATCTAAC | + |
Preference number: 3 (lower is better) Translates to: PRAFLILLHPVS*MTARTQAQLSN Trigger: GTTAGATAGCTGGGCTTGAGTTCTAGCTGTCATTCACGACACGGGATGAAGGAGAATGAGGAACGCTCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR GCA 72 bp | GCTGGAAAAGAACAAAGTGGGATCCCACACTTCTCCTaGACCCTCCAGCAGGTTGCTGGAGCTATATATGGA | + |
Preference number: 3 (lower is better) Translates to: AGKEQSGIPHFS*TLQQVAGAIYG Trigger: TCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGTTCTTTTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
||
3UTR GCA 72 bp | AAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGTaGTGGGAACCAAGTCTGGGTGCCCCGAAAGAGAGA | + |
Preference number: 3 (lower is better) Translates to: KSHMVGFELPCG*WEPSLGAPKER Trigger: TCTCTCTTTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATATGTGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 72 bp | GTTTTGAGCTACCATGTGGGTGCTGGGAACCAAGTCTaGGTGCCCCGAAAGAGAGAAACAAGTGCTCTTAAC | + |
Preference number: 3 (lower is better) Translates to: VLSYHVGAGNQV*VPRKRETSALN Trigger: GTTAAGAGCACTTGTTTCTCTCTTTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 72 bp | TCACATATGGTTGGTTTTGAGCTACCATGTGGGTGCTaGGAACCAAGTCTGGGTGCCCCGAAAGAGAGAAAC | + |
Preference number: 3 (lower is better) Translates to: SHMVGFELPCGC*EPSLGAPKERN Trigger: GTTTCTCTCTTTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 72 bp | GATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTaGGCTACCATGTGGGTGCTGGGAACCAAGTCTGGG | + |
Preference number: 3 (lower is better) Translates to: DLLANEVTYGWF*ATMWVLGTKSG Trigger: CCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 72 bp | TGGATGTTTTGTCTGCATGTATGTACATGTACCATGTaGGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTG | + |
Preference number: 3 (lower is better) Translates to: WMFCLHVCTCTM*VPGACEGQEKV Trigger: CACCTTCTCCTGACCTTCACAGGCACCGGGCACTCACATGGTACATGTACATACATGCAGACAAAACATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR TCA 72 bp | GAGCGTTCCTCATTCTCCTTCATCCCGTGTCGTGAATaGCAGCTAGAACTCAAGCCCAGCTATCTAACTCGA | + |
Preference number: 3 (lower is better) Translates to: ERSSFSFIPCRE*QLELKPSYLTR Trigger: TCGAGTTAGATAGCTGGGCTTGAGTTCTAGCTGTCATTCACGACACGGGATGAAGGAGAATGAGGAACGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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3UTR GCA 72 bp | TGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTaGTGGAGCTATATATGGAGAAACCCATTTGTGAAT | + |
Preference number: 3 (lower is better) Translates to: WDPTLLLHPPAG*WSYIWRNPFVN Trigger: ATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR GCA 72 bp | TGTTTTGTCTGCATGTATGTACATGTACCATGTGAGTaGCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTGG | + |
Preference number: 3 (lower is better) Translates to: CFVCMYVHVPCE*PVPVKVRRRCW Trigger: CCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTCACATGGTACATGTACATACATGCAGACAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR GCA 72 bp | TTCTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATaGTTCAGTCTTCTGGACAGAAAATGGATGCCTTTG | + |
Preference number: 3 (lower is better) Translates to: FFHGATSVPSSR*FSLLDRKWMPL Trigger: CAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 72 bp | GATCCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTaGAGCTATATATGGAGAAACCCATTTGTGAATAGG | + |
Preference number: 3 (lower is better) Translates to: DPTLLLHPPAGC*SYIWRNPFVNR Trigger: CCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR GCA 72 bp | GAGCCTCCTTTTCCCTCTCCAAGAACATGGAATAAGTaGAGGGCATGGACAAATGTTGTACTGGAGGATCAG | + |
Preference number: 3 (lower is better) Translates to: EPPFPSPRTWNK*RAWTNVVLEDQ Trigger: CTGATCCTCCAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTGGAGAGGGAAAAGGAGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 72 bp | GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTaGCAAATGAAGTCACATATGGTTGGTTTTGAGCTA | + |
Preference number: 3 (lower is better) Translates to: VPVKVRRRCWIS*QMKSHMVGFEL Trigger: TAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 72 bp | TATATCTTAGAGCCTCCTTTTCCCTCTCCAAGAACATaGAATAAGTGCAGGGCATGGACAAATGTTGTACTG | + |
Preference number: 3 (lower is better) Translates to: YILEPPFPSPRT*NKCRAWTNVVL Trigger: CAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTGGAGAGGGAAAAGGAGGCTCTAAGATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR-3UTR CAA 90 bp | GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCAAGTGTATGGATGTTTaGTCTGCATGTATGTACATG | + |
Preference number: 3 (lower is better) Translates to: VPSSRCFSLLDRKWMPLIKCMDV*SACMYM Trigger: CATGTACATACATGCAGACAAAACATCCATACACTT...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CCA 72 bp | GGTATGGTAGGTACCAGAGGAACTATTCAGTCCTCATaGAACAGACAATTTATCTTCTTGACCAACAGATAT | + |
Preference number: 3 (lower is better) Translates to: GMVGTRGTIQSS*NRQFIFLTNRY Trigger: ATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGTTCCTCTGGTACCTACCATACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | GCAGTGCTCTGGTGGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCCTCCAGGGACGGCGATaGCGACACGGAGTTGGACTT | + |
Preference number: 4 (lower is better) Translates to: AVLWWRRPRGVRPPCCPTLQGRR*RHGVGL Trigger: AAGTCCAACTCCGTGTCGCCATCGCCGTCCCTGGAG...GGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR TCA 90 bp | CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGGGAATCGGCAGCTTTTaGTGCGGCGAGTGGCTGCCT | + |
Preference number: 4 (lower is better) Translates to: PAGRETDLCALRAAGSQQGIGSF*CGEWLP Trigger: AGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCC...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | TCTTCCAGGAGACCCAGGTTTGATTTCCAGCACCCACACGGTAGCTTACAACCAGCGTCCGCGTCCGCCTaGTCCAGGGACGGCGATGGC | + |
Preference number: 4 (lower is better) Translates to: SSRRPRFDFQHPHGSLQPASASA*SRDGDG Trigger: GCCATCGCCGTCCCTGGAGCAGGCGGACGCGGACGC...TGGTTGTAAGCTACCGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGTCCTGCAGCGAGTTCTaGAGGGCTTGGGACTGGCTT | + |
Preference number: 4 (lower is better) Translates to: GEDPGASDLPAAPPRKDRSCSEF*RAWDWL Trigger: AAGCCAGTCCCAAGCCCTGCAGAACTCGCTGCAGGA...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGGCTGCTCACTCTGGTTaGTCAAGGGCTGTGGCTGGT | + |
Preference number: 4 (lower is better) Translates to: GEDPGASDLPAAPPRKDRAAHSG*SRAVAG Trigger: ACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGC...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR TCA 90 bp | CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGTCCGAACCTTGGAATTaGGGCCTTGTTCCAGGCTCC | + |
Preference number: 4 (lower is better) Translates to: PAGRETDLCALRAAGSQQSEPWN*GLVPGS Trigger: GGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGA...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | AGGCAGCAAGGTGAGCCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCATGGCATAGGGCATACTaGGCTCTTCTCTGGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: RQQGEPAGRETDLCALRAWHRAY*ALLWPP Trigger: TGGAGGCCAGAGAAGAGCCCAGTATGCCCTATGCCA...TGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGGCTCACCTTGCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGAAGAACCTTTTCAGGTaGCTCACGTCCGCCCGCATC | + |
Preference number: 4 (lower is better) Translates to: PAGRETDLCALRAAGSQQKNLFR*LTSARI Trigger: GATGCGGGCGGACGTGAGCCACCTGAAAAGGTTCTT...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CAA 72 bp | TTCCTTCTCCTTGTTCCGAACCTTGGAATTGAGGCCTaGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCG | + |
Preference number: 4 (lower is better) Translates to: FLLLVPNLGIEA*FQAPQGRLCLP Trigger: CGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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CDS-3UTR TCA 90 bp | GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCGCTGCACTTTGGTGCTaGTGTCCAGCGCGTCCGCGT | + |
Preference number: 4 (lower is better) Translates to: VETDRLRQLLRDGPQKTVAALWC*CPARPR Trigger: ACGCGGACGCGCTGGACATCAGCACCAAAGTGCAGC...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR TCA 90 bp | GAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGAGCTGTAAGGACTCTGTaGGGTGTCTCAGCTCCTTCT | + |
Preference number: 4 (lower is better) Translates to: EKTQGRQTSLLPHQGKIGAVRTL*GVSAPS Trigger: AGAAGGAGCTGAGACACCTCACAGAGTCCTTACAGC...TCCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAACGCCTGCTGCTTCTCTaGAGTGAGCTCCTGCAGCGA | + |
Preference number: 4 (lower is better) Translates to: LPDLAVRTLGNPGVKDSQRLLLL*SELLQR Trigger: TCGCTGCAGGAGCTCACTGCAGAGAAGCAGCAGGCG...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGGCTCTGCATTCCGGATaGACTCCTCGAAGAACCTTT | + |
Preference number: 4 (lower is better) Translates to: GEDPGASDLPAAPPRKDRALHSG*TPRRTF Trigger: AAAGGTTCTTCGAGGAGTGCATCCGGAATGCAGAGC...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | GATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCGGGGTATGGAGACCATCACTaGCCGGTGGCTGCTCACTCT | + |
Preference number: 4 (lower is better) Translates to: DLAVRTLGNPGVKDSQSGYGDHH*PVAAHS Trigger: AGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATA...CCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CAA 72 bp | ACACCGGAGCTTCTTCCAGATCTGGCTGTGCGGACTTaGGGAAACCCTGGGGTCAAGGACTCTCAATCGGGG | + |
Preference number: 4 (lower is better) Translates to: TPELLPDLAVRT*GNPGVKDSQSG Trigger: CCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAGAAGCTCCGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCTGCAGTGAGCTCCTaGAGCGAGTTCTGCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: LPDLAVRTLGNPGVKDSQSAVSS*SEFCRA Trigger: AGCCCTGCAGAACTCGCTGCAGGAGCTCACTGCAGA...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGCCGCAAGGCCGCCTCTaGCTCCCGAAGCCGCCTCTC | + |
Preference number: 4 (lower is better) Translates to: WISWQMKSHMVGFELPCGPQGRL*LPKPPL Trigger: GAGAGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGG...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAACTTGGCCTCCAGCTCTaGATTCCGGATGCACTCCTC | + |
Preference number: 4 (lower is better) Translates to: LPDLAVRTLGNPGVKDSQLGLQL*IPDALL Trigger: GAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAG...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | CCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCATCGGCCTCCAGCACTTaGTTCAGGCGCTCAAGCTCC | + |
Preference number: 4 (lower is better) Translates to: PVPVKVRRRCWISWQMKSSASST*FRRSSS Trigger: GGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGA...TGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR TCA 90 bp | CTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGCTAGCTGGGAGGTCATaGAGGACTGGGATGGCTTCA | + |
Preference number: 4 (lower is better) Translates to: LPRGYFRPFLKMLQSSGQLAGRS*RTGMAS Trigger: TGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAG...CTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | GCAGTGCTCTGGTGGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCTTGTCTAAATATTCCTaGTTTTCCTTAGCCAGCTGT | + |
Preference number: 4 (lower is better) Translates to: AVLWWRRPRGVRPPCCPTLSKYS*FSLASC Trigger: ACAGCTGGCTAAGGAAAAGCAGGAATATTTAGACAA...GGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | GGGCTCGGGCATGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGATGCGGCGAGTGGCTaGCTTATGGATGTACACGGA | + |
Preference number: 4 (lower is better) Translates to: GLGHGEMAQWLRALVALPDAASG*LMDVHG Trigger: TCCGTGTACATCCATAAGGCAGCCACTCGCCGCATC...TGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | TGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGGGAAGCGCTGGTCTCTaGTTAGCCGCTTGGCTACCT | + |
Preference number: 4 (lower is better) Translates to: WRDGSVVKSTCCSSRRPRGSAGL*LAAWLP Trigger: AGGTAGCCAAGCGGCTAAGCAGAGACCAGCGCTTCC...CCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | GAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGAGAGGTCATGAAGGACTaGGATGGCTTCATGTCATTC | + |
Preference number: 4 (lower is better) Translates to: EKTQGRQTSLLPHQGKIGEVMKD*DGFMSF Trigger: GAATGACATGAAGCCATCCCAGTCCTTCATGACCTC...TCCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | TGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGCTCTGCTTAGCCGCTTaGCTACCTCCTTCAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: WDPTLLLHPPAGCWSYIWLCLAA*LPPSAP Trigger: AGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAG...CCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CAA 72 bp | ATCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATaGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCT | + |
Preference number: 4 (lower is better) Translates to: IRSSFSLFRTLE*RPCSRLRKAAS Trigger: AGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142760.2 |
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CDS-3UTR GCA 90 bp | CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAAAGCTCCCTTTTGATCTaGTCCTGCTCCACTCTCAGC | + |
Preference number: 4 (lower is better) Translates to: LPDLAVRTLGNPGVKDSQSSLLI*SCSTLS Trigger: GCTGAGAGTGGAGCAGGAGCAGATCAAAAGGGAGCT...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCACATGGTGGCTGCTCACTCTaGTTGGTCAAGGGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: VPVKVRRRCWISWQMKSHGGCSL*LVKGCG Trigger: GCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACC...ATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR TCA 90 bp | CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCTCTCTGTTCCCTCTaGAGGCACAGTTCTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: LPDLAVRTLGNPGVKDSQSLCSL*RHSSSV Trigger: GACAGAAGAACTGTGCCTTCAGAGGGAACAGAGAGA...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR TCA 90 bp | TGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGGCTCTTCGATCTGCCTaGGGTTGCTATGGAGACCAT | + |
Preference number: 4 (lower is better) Translates to: WRDGSVVKSTCCSSRRPRALRSA*GCYGDH Trigger: ATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGC...CCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR TCA 90 bp | TTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGGCTTGGGACTGGCTTaGGTAGAATTCCCGTTCCTC | + |
Preference number: 4 (lower is better) Translates to: FVETDRLRQLLRDGPQKTGLGLA*VEFPFL Trigger: GAGGAACGGGAATTCTACTCAAGCCAGTCCCAAGCC...AGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGACCGCCGGGACCACTTaGCCGAGGATCTCCCGAACG | + |
Preference number: 4 (lower is better) Translates to: LKMLQSSGQKMDAFDLALTAGTT*PRISRT Trigger: CGTTCGGGAGATCCTCGGCCAAGTGGTCCCGGCGGT...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | CTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGGGTGTGAGATCTTCATaGCATAGGGCATACTGGGCT | + |
Preference number: 4 (lower is better) Translates to: LPRGYFRPFLKMLQSSGQGVRSS*HRAYWA Trigger: AGCCCAGTATGCCCTATGCCATGAAGATCTCACACC...CTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGTTTTCTTCTTCTCTATaGAGAGTTCCTCCAGCGTAT | + |
Preference number: 4 (lower is better) Translates to: PAGRETDLCALRAAGSQQFSSSL*RVPPAY Trigger: ATACGCTGGAGGAACTCTCCATAGAGAAGAAGAAAA...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | CTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGCGAGTGGCTGCCTTATaGATGTACACGGAGTTCTTC | + |
Preference number: 4 (lower is better) Translates to: LPRGYFRPFLKMLQSSGQRVAAL*MYTEFF Trigger: GAAGAACTCCGTGTACATCCATAAGGCAGCCACTCG...CTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | TTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGACCACCTCCTCAAACTaGTGTTTCTCGGCCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: FSCTLQQVAGAIYGETHLTTSSN*CFSASS Trigger: GCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTGGT...CAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | AGAGAGAAACAAGTGCTCTTAACCACTGTCCACATCTCCGCCCCCTCCCCAAGTGTTGGTCAAGGGCTGTaGCTGGTTCTTATCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: REKQVLLTTVHISAPSPSVGQGL*LVLIFL Trigger: GAGGAAGATAAGAACCAGCCACAGCCCTTGACCAAC...ACTTGGGGAGGGGGCGGAGATGTGGACAGTGGTTAAGAGCACTTGTTTCTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCCTGGACCGGCGGCGGTaGAATCGGCAGCTTTTGATG | + |
Preference number: 4 (lower is better) Translates to: VPSSRCFSLLDRKWMPLILDRRR*NRQLLM Trigger: CATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAG...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR TCA 90 bp | TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGGCTGCTTCTCTGCAGTaGGCTCCTGCAGCGAGTTCT | + |
Preference number: 4 (lower is better) Translates to: WISWQMKSHMVGFELPCGAASLQ*APAASS Trigger: AGAACTCGCTGCAGGAGCTCACTGCAGAGAAGCAGC...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | AGGATCAGGAACGAAGAGAGAGTTAGGGGGTGTTATGTGACCAGGGTCAGCACAATCCGCTCTTCGATCTaGCTGAGGTTGCTATGGAGA | + |
Preference number: 4 (lower is better) Translates to: RIRNEERVRGCYVTRVSTIRSSI*LRLLWR Trigger: TCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGAT...TGTGCTGACCCTGGTCACATAACACCCCCTAACTCTCTCTTCGTTCCTGATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGAGTTCCCGCTCCGCCTaGTGCTTCTCTGCAGTGAGC | + |
Preference number: 4 (lower is better) Translates to: LKMLQSSGQKMDAFDLALSSRSA*CFSAVS Trigger: GCTCACTGCAGAGAAGCAGCAGGCGGAGCGGGAACT...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCAACAAGACATTCCCATaGAAGTCCTGGTGTGAGATC | + |
Preference number: 4 (lower is better) Translates to: VETDRLRQLLRDGPQKTVNKTFP*KSWCEI Trigger: GATCTCACACCAGGACTTCCATGGGAATGTCTTGTT...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | TCTTCCAGGAGACCCAGGTTTGATTTCCAGCACCCACACGGTAGCTTACAACCATTGTTGGCTTCTAGCTaGGAGGTCATGAAGGACTGG | + |
Preference number: 4 (lower is better) Translates to: SSRRPRFDFQHPHGSLQPLLASS*EVMKDW Trigger: CCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAA...TGGTTGTAAGCTACCGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR GCA 90 bp | TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGTCCACTCTCAGCTCTTaGACCACCTCCTCAAACTGC | + |
Preference number: 4 (lower is better) Translates to: WISWQMKSHMVGFELPCGSTLSS*TTSSNC Trigger: GCAGTTTGAGGAGGTGGTGCAAGAGCTGAGAGTGGA...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCGTCAAGGGCTGTGGCTaGTTCTTATCTTCCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: VPSSRCFSLLDRKWMPLIVKGCG*FLSSSS Trigger: GCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGAC...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CAA 72 bp | TTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGTTaGATTTCCAGCACCCACACGGTAGCTTACAACCAT | + |
Preference number: 4 (lower is better) Translates to: LRALVALPGDPG*ISSTHTVAYNH Trigger: ATGGTTGTAAGCTACCGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CCA 90 bp | GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCGCTCCTCTATGTTGTTaGCTTCTAGCTGGGAGGTCA | + |
Preference number: 4 (lower is better) Translates to: VPSSRCFSLLDRKWMPLIAPLCC*LLAGRS Trigger: TGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGC...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR TCA 90 bp | CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGATGGAAGTCCTGGTGTaGGATCTTCATGGCATAGGG | + |
Preference number: 4 (lower is better) Translates to: LKMLQSSGQKMDAFDLALMEVLV*DLHGIG Trigger: CCCTATGCCATGAAGATCTCACACCAGGACTTCCAT...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CAA 72 bp | CAAGAACATGGAATAAGTGCAGGGCATGGACAAATGTaGTACTGGAGGATCAGGAACGAAGAGAGAGTTAGG | + |
Preference number: 4 (lower is better) Translates to: QEHGISAGHGQM*YWRIRNEERVR Trigger: CCTAACTCTCTCTTCGTTCCTGATCCTCCAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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3UTR CAA 72 bp | ACTATTCAGTCCTCATGGAACAGACAATTTATCTTCTaGACCAACAGATATACCACACAGAGCCAGGCCTCA | + |
Preference number: 4 (lower is better) Translates to: TIQSSWNRQFIF*TNRYTTQSQAS Trigger: TGAGGCCTGGCTCTGTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 90 bp | CGAACGGCCGTTTCCACAGAACCCCGTAGAGCTGCACTTTGGTGCTaGTGTCCAGCGCGTCCGCGTCCGCCTGCTCCAGGGACGGCGATG | + |
Preference number: 5 (lower is better) Translates to: RTAVSTEPRRAALWC*CPARPRPPAPGTAM Trigger: CATCGCCGTCCCTGGAGCAGGCGGACGCGGACGCGCTGGACATCAGCACCAAAGTGCAGCTCTACGGGGTTCTGTGGAAACGGCCGTTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGAACCGCCGGGACCACTaGGCCGAGGATCTCCCGAAC | + |
Preference number: 5 (lower is better) Translates to: GEDPGASDLPAAPPRKDRNRRDH*AEDLPN Trigger: GTTCGGGAGATCCTCGGCCAAGTGGTCCCGGCGGTT...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGTGGAATCGGCAGCTTTaGATGCGGCGAGTGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: PAGRETDLCALRAAGSQQWNRQL*MRRVAA Trigger: GGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCA...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGATGATGACCGGCATCTaGGCCTCCAGCTCTGCATTC | + |
Preference number: 5 (lower is better) Translates to: GEDPGASDLPAAPPRKDRMMTGI*ASSSAF Trigger: GAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCAT...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 90 bp | GCCAGAAGCTTCTCCGCCAATAGCTCCTGCATCCGCTCTTCGATCTaGCTGAGGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCA | + |
Preference number: 5 (lower is better) Translates to: ARSFSANSSCIRSSI*LRLLWRPSLAGGCS Trigger: TGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAAGCTTCTGGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | GCAGTGCTCTGGTGGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAGCAGAAAGCTTTCTTaGATGATGAAAAACCGCCGG | + |
Preference number: 5 (lower is better) Translates to: AVLWWRRPRGVRPPCCPTSRKLS*MMKNRR Trigger: CCGGCGGTTTTTCATCATCAAAGAAAGCTTTCTGCT...GGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | GAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGAGGGCTTGGGACTGGCTaGAGTAGAATTCCCGTTCCT | + |
Preference number: 5 (lower is better) Translates to: EKTQGRQTSLLPHQGKIGGLGTG*SRIPVP Trigger: AGGAACGGGAATTCTACTCAAGCCAGTCCCAAGCCC...TCCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 90 bp | GAAGCTTCTCCGCCAATAGCTCCTGCATCCGCTCTTCGATCTGCCTaGGGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCT | + |
Preference number: 5 (lower is better) Translates to: EASPPIAPASALRSA*GCYGDHHWPVAAHS Trigger: AGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 90 bp | ATCTGCTCCTGCTCCACTCTCAGCTCTTGCACCACCTCCTCAAACTaGTGTTTCTCGGCCTCCAGCACTTGGTTCAGGCGCTCAAGCTCC | + |
Preference number: 5 (lower is better) Translates to: ICSCSTLSSCTTSSN*CFSASSTWFRRSSS Trigger: GGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTGGTGCAAGAGCTGAGAGTGGAGCAGGAGCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 90 bp | GGACCGGCGGCGGTGGAATCGGCAGCTTTTGATGCGGCGAGTGGCTaGCTTATGGATGTACACGGAGTTCTTCATGATGACCGGCATCTT | + |
Preference number: 5 (lower is better) Translates to: GPAAVESAAFDAASG*LMDVHGVLHDDRHL Trigger: AAGATGCCGGTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 90 bp | GCCAATAGCTCCTGCATCCGCTCTTCGATCTGCCTGAGGTTGCTATaGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTTGGTCAAG | + |
Preference number: 5 (lower is better) Translates to: ANSSCIRSSICLRLL*RPSLAGGCSLWLVK Trigger: CTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 90 bp | CGGCGGTGGAATCGGCAGCTTTTGATGCGGCGAGTGGCTGCCTTATaGATGTACACGGAGTTCTTCATGATGACCGGCATCTTGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: RRWNRQLLMRRVAAL*MYTEFFMMTGILAS Trigger: GGAGGCCAAGATGCCGGTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 90 bp | TGGGATGGCTTCATGTCATTCCAGGAAGTACTGGACCGGCGGCGGTaGAATCGGCAGCTTTTGATGCGGCGAGTGGCTGCCTTATGGATG | + |
Preference number: 5 (lower is better) Translates to: WDGFMSFQEVLDRRR*NRQLLMRRVAALWM Trigger: CATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTCCTGGAATGACATGAAGCCATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGAGTTCTAGCTCCCTTTaGATCTGCTCCTGCTCCACT | + |
Preference number: 5 (lower is better) Translates to: PAGRETDLCALRAAGSQQSSSSL*ICSCST Trigger: AGTGGAGCAGGAGCAGATCAAAAGGGAGCTAGAACT...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 90 bp | CATTCCAGGAAGTACTGGACCGGCGGCGGTGGAATCGGCAGCTTTTaGTGCGGCGAGTGGCTGCCTTATGGATGTACACGGAGTTCTTCA | + |
Preference number: 5 (lower is better) Translates to: HSRKYWTGGGGIGSF*CGEWLPYGCTRSSS Trigger: TGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTCCTGGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 90 bp | TCGATCTGCCTGAGGTTGCTATGGAGACCATCACTGGCCGGTGGCTaGTCACTCTGGTTGGTCAAGGGCTGTGGCTGGTTCTTATCTTCC | + |
Preference number: 5 (lower is better) Translates to: SICLRLLWRPSLAGG*SLWLVKGCGWFLSS Trigger: GGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 90 bp | CTGAGGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTaGTTGGTCAAGGGCTGTGGCTGGTTCTTATCTTCCTCCAGCATC | + |
Preference number: 5 (lower is better) Translates to: LRLLWRPSLAGGCSL*LVKGCGWFLSSSSI Trigger: GATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 90 bp | CTCTTCGATCTGCCTGAGGTTGCTATGGAGACCATCACTGGCCGGTaGCTGCTCACTCTGGTTGGTCAAGGGCTGTGGCTGGTTCTTATC | + |
Preference number: 5 (lower is better) Translates to: LFDLPEVAMETITGR*LLTLVGQGLWLVLI Trigger: GATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | GATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCGGGGAGCTCCTCTATGTTGTaGGCTTCTAGCTGGGAGGTC | + |
Preference number: 5 (lower is better) Translates to: DLAVRTLGNPGVKDSQSGSSSML*ASSWEV Trigger: GACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCT...CCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 90 bp | GGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTTaGTCAAGGGCTGTGGCTGGTTCTTATCTTCCTCCAGCATCTCTA | + |
Preference number: 5 (lower is better) Translates to: GCYGDHHWPVAAHSG*SRAVAGSYLPPASL Trigger: TAGAGATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCACATGGCTGCTCACTCTGGTaGGTCAAGGGCTGTGGCTGG | + |
Preference number: 5 (lower is better) Translates to: VPVKVRRRCWISWQMKSHGCSLW*VKGCGW Trigger: CCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCC...ATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 90 bp | AGTTCTAGCTCCCTTTTGATCTGCTCCTGCTCCACTCTCAGCTCTTaGACCACCTCCTCAAACTGCTGTTTCTCGGCCTCCAGCACTTGG | + |
Preference number: 5 (lower is better) Translates to: SSSSLLICSCSTLSS*TTSSNCCFSASSTW Trigger: CCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTGGTGCAAGAGCTGAGAGTGGAGCAGGAGCAGATCAAAAGGGAGCTAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 90 bp | TCCTTCATCCGCTTCTCAGCCAGAAGCTTCTCCGCCAATAGCTCCTaGATCCGCTCTTCGATCTGCCTGAGGTTGCTATGGAGACCATCA | + |
Preference number: 5 (lower is better) Translates to: SFIRFSARSFSANSS*IRSSICLRLLWRPS Trigger: TGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAAGCTTCTGGCTGAGAAGCGGATGAAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 90 bp | GTACACGGAGTTCTTCATGATGACCGGCATCTTGGCCTCCAGCTCTaGATTCCGGATGCACTCCTCGAAGAACCTTTTCAGGTGGCTCAC | + |
Preference number: 5 (lower is better) Translates to: VHGVLHDDRHLGLQL*IPDALLEEPFQVAH Trigger: GTGAGCCACCTGAAAAGGTTCTTCGAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAACTCCGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 90 bp | TGTGATAGATGGATTCCCGGAAGCGCTGGTCTCTGCTTAGCCGCTTaGCTACCTCCTTCAGCTCCTCTATGTTGTTGGCTTCTAGCTGGG | + |
Preference number: 5 (lower is better) Translates to: CDRWIPGSAGLCLAA*LPPSAPLCCWLLAG Trigger: CCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGACCAGCGCTTCCGGGAATCCATCTATCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | TGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGTGTGCCTCCAGGCTTTaGATCATAGCTTCCCCTAGC | + |
Preference number: 5 (lower is better) Translates to: WDPTLLLHPPAGCWSYIWCASRL*IIASPS Trigger: GCTAGGGGAAGCTATGATCAAAAGCCTGGAGGCACA...CCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCTCTTGTTCCACGCCCTaGAGGCATCTTGCAGTGAGT | + |
Preference number: 5 (lower is better) Translates to: VETDRLRQLLRDGPQKTVSCSTP*RHLAVS Trigger: ACTCACTGCAAGATGCCTCAAGGGCGTGGAACAAGA...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | GGGCTCGGGCATGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCATTCCGAACCTTGGAATaGAGGCCTTGTTCCAGGCTC | + |
Preference number: 5 (lower is better) Translates to: GLGHGEMAQWLRALVALPFRTLE*RPCSRL Trigger: GAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAA...TGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 90 bp | CAGGTCACCTTCCCAGACTCCTGCAACATCTCCAGCCATTGTGTCTaGTCAAACTCAGACTCCGCAGCCAACAAGACATTCCCATGGAAG | + |
Preference number: 5 (lower is better) Translates to: QVTFPDSCNISSHCV*SNSDSAANKTFPWK Trigger: CTTCCATGGGAATGTCTTGTTGGCTGCGGAGTCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAAGGTGACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 90 bp | TCACTGGCCGGTGGCTGCTCACTCTGGTTGGTCAAGGGCTGTGGCTaGTTCTTATCTTCCTCCAGCATCTCTAGGGTTTTCTTCTTCTCT | + |
Preference number: 5 (lower is better) Translates to: SLAGGCSLWLVKGCG*FLSSSSISRVFFFS Trigger: AGAGAAGAAGAAAACCCTAGAGATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 90 bp | CCTCCTTCAGCTCCTCTATGTTGTTGGCTTCTAGCTGGGAGGTCATaGAGGACTGGGATGGCTTCATGTCATTCCAGGAAGTACTGGACC | + |
Preference number: 5 (lower is better) Translates to: PPSAPLCCWLLAGRS*RTGMASCHSRKYWT Trigger: GGTCCAGTACTTCCTGGAATGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 90 bp | CGCTTGGCTACCTCCTTCAGCTCCTCTATGTTGTTGGCTTCTAGCTaGGAGGTCATGAAGGACTGGGATGGCTTCATGTCATTCCAGGAA | + |
Preference number: 5 (lower is better) Translates to: RLATSFSSSMLLASS*EVMKDWDGFMSFQE Trigger: TTCCTGGAATGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | TTGTTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGTCGATCTGCCTGAGGTaGCTATGGAGACCATCACTG | + |
Preference number: 5 (lower is better) Translates to: LFVETDRLRQLLRDGPQKSICLR*LWRPSL Trigger: CAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGA...CTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | TTGTTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGTTCAGCTCCTCTATGTaGTTGGCTTCTAGCTGGGAG | + |
Preference number: 5 (lower is better) Translates to: LFVETDRLRQLLRDGPQKFSSSM*LASSWE Trigger: CTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAA...CTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 90 bp | TCCAGCACTTGGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCTCTaGAGGCACAGTTCTTCTGTCTCCTCCATCAGCTTGTCTAAATAT | + |
Preference number: 5 (lower is better) Translates to: SSTWFRRSSSSLCSL*RHSSSVSSISLSKY Trigger: ATATTTAGACAAGCTGATGGAGGAGACAGAAGAACTGTGCCTTCAGAGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCAAGTGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | TTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGCAACATCTCCAGCCATaGTGTCTGCTCAAACTCAGA | + |
Preference number: 5 (lower is better) Translates to: FSCTLQQVAGAIYGETHLQHLQP*CLLKLR Trigger: TCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTG...CAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS-3UTR CAA 90 bp | TTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGCGTTCTTCCTTCTCCTaGTTCCGAACCTTGGAATTG | + |
Preference number: 5 (lower is better) Translates to: FSCTLQQVAGAIYGETHLRSSFS*FRTLEL Trigger: CAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACG...CAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | ACTTTGGTGCTGATGTCCAGCGCGTCCGCGTCCGCCTaGTCCAGGGACGGCGATGGCGACACGGAGTTGGAC | + |
Preference number: 6 (lower is better) Translates to: TLVLMSSASASA*SRDGDGDTELD Trigger: GTCCAACTCCGTGTCGCCATCGCCGTCCCTGGAGCAGGCGGACGCGGACGCGCTGGACATCAGCACCAAAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | CTGCCTGAGGTTGCTATGGAGACCATCACTGGCCGGTaGCTGCTCACTCTGGTTGGTCAAGGGCTGTGGCTG | + |
Preference number: 6 (lower is better) Translates to: LPEVAMETITGR*LLTLVGQGLWL Trigger: CAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 72 bp | CCGCCAATAGCTCCTGCATCCGCTCTTCGATCTGCCTaGGGTTGCTATGGAGACCATCACTGGCCGGTGGCT | + |
Preference number: 6 (lower is better) Translates to: PPIAPASALRSA*GCYGDHHWPVA Trigger: AGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 72 bp | AAGTACTGGACCGGCGGCGGTGGAATCGGCAGCTTTTaGTGCGGCGAGTGGCTGCCTTATGGATGTACACGG | + |
Preference number: 6 (lower is better) Translates to: KYWTGGGGIGSF*CGEWLPYGCTR Trigger: CCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | CTGAGGTTGCTATGGAGACCATCACTGGCCGGTGGCTaGTCACTCTGGTTGGTCAAGGGCTGTGGCTGGTTC | + |
Preference number: 6 (lower is better) Translates to: LRLLWRPSLAGG*SLWLVKGCGWF Trigger: GAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | TCCTGCATCCGCTCTTCGATCTGCCTGAGGTTGCTATaGAGACCATCACTGGCCGGTGGCTGCTCACTCTGG | + |
Preference number: 6 (lower is better) Translates to: SCIRSSICLRLL*RPSLAGGCSLW Trigger: CCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | TTCATGTCATTCCAGGAAGTACTGGACCGGCGGCGGTaGAATCGGCAGCTTTTGATGCGGCGAGTGGCTGCC | + |
Preference number: 6 (lower is better) Translates to: FMSFQEVLDRRR*NRQLLMRRVAA Trigger: GGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTCCTGGAATGACATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | GAAGTACTGGACCGGCGGCGGTGGAATCGGCAGCTTTaGATGCGGCGAGTGGCTGCCTTATGGATGTACACG | + |
Preference number: 6 (lower is better) Translates to: EVLDRRRWNRQL*MRRVAALWMYT Trigger: CGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 90 bp | TTCTCCGCCAATAGCTCCTGCATCCGCTCTTCGATCTGCCTGAGGTaGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTTG | + |
Preference number: 6 (lower is better) Translates to: FSANSSCIRSSICLR*LWRPSLAGGCSLWL Trigger: CAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | TGGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTaGGTCAAGGGCTGTGGCTGGTTCTTATCTTCCTCC | + |
Preference number: 6 (lower is better) Translates to: WRPSLAGGCSLW*VKGCGWFLSSS Trigger: GGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 90 bp | CTCTTGCACCACCTCCTCAAACTGCTGTTTCTCGGCCTCCAGCACTaGGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCTCTGAAGGCA | + |
Preference number: 6 (lower is better) Translates to: LLHHLLKLLFLGLQH*VQALKLLSLFPLKA Trigger: TGCCTTCAGAGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTGGTGCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 90 bp | TCATTCCAGGAAGTACTGGACCGGCGGCGGTGGAATCGGCAGCTTTaGATGCGGCGAGTGGCTGCCTTATGGATGTACACGGAGTTCTTC | + |
Preference number: 6 (lower is better) Translates to: SFQEVLDRRRWNRQL*MRRVAALWMYTEFF Trigger: GAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTCCTGGAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | TTCTCCGCCAATAGCTCCTGCATCCGCTCTTCGATCTaGCTGAGGTTGCTATGGAGACCATCACTGGCCGGT | + |
Preference number: 6 (lower is better) Translates to: FSANSSCIRSSI*LRLLWRPSLAG Trigger: ACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | CGCTTCTCAGCCAGAAGCTTCTCCGCCAATAGCTCCTaGATCCGCTCTTCGATCTGCCTGAGGTTGCTATGG | + |
Preference number: 6 (lower is better) Translates to: RFSARSFSANSS*IRSSICLRLLW Trigger: CCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAAGCTTCTGGCTGAGAAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | ACCTCCTCAAACTGCTGTTTCTCGGCCTCCAGCACTTaGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCTC | + |
Preference number: 6 (lower is better) Translates to: TSSNCCFSASST*FRRSSSSLCSL Trigger: GAGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | CTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTaGTTGGTCAAGGGCTGTGGCTGGTTCTTATCTTCC | + |
Preference number: 6 (lower is better) Translates to: LWRPSLAGGCSL*LVKGCGWFLSS Trigger: GGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | CACCTCCTCAAACTGCTGTTTCTCGGCCTCCAGCACTaGGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCT | + |
Preference number: 6 (lower is better) Translates to: HLLKLLFLGLQH*VQALKLLSLFP Trigger: AGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | AATAGCTCCTGCATCCGCTCTTCGATCTGCCTGAGGTaGCTATGGAGACCATCACTGGCCGGTGGCTGCTCA | + |
Preference number: 6 (lower is better) Translates to: NSSCIRSSICLR*LWRPSLAGGCS Trigger: TGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 90 bp | AGGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTaGGTCAAGGGCTGTGGCTGGTTCTTATCTTCCTCCAGCATCTCT | + |
Preference number: 6 (lower is better) Translates to: RLLWRPSLAGGCSLW*VKGCGWFLSSSSIS Trigger: AGAGATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | TGGATTCCCGGAAGCGCTGGTCTCTGCTTAGCCGCTTaGCTACCTCCTTCAGCTCCTCTATGTTGTTGGCTT | + |
Preference number: 6 (lower is better) Translates to: WIPGSAGLCLAA*LPPSAPLCCWL Trigger: AAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGACCAGCGCTTCCGGGAATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | TGGATGTACACGGAGTTCTTCATGATGACCGGCATCTaGGCCTCCAGCTCTGCATTCCGGATGCACTCCTCG | + |
Preference number: 6 (lower is better) Translates to: WMYTEFFMMTGI*ASSSAFRMHSS Trigger: CGAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAACTCCGTGTACATCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | ATGGATTCCCGGAAGCGCTGGTCTCTGCTTAGCCGCTaGGCTACCTCCTTCAGCTCCTCTATGTTGTTGGCT | + |
Preference number: 6 (lower is better) Translates to: MDSRKRWSLLSR*ATSFSSSMLLA Trigger: AGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGACCAGCGCTTCCGGGAATCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 90 bp | TGGTCTCTGCTTAGCCGCTTGGCTACCTCCTTCAGCTCCTCTATGTaGTTGGCTTCTAGCTGGGAGGTCATGAAGGACTGGGATGGCTTC | + |
Preference number: 6 (lower is better) Translates to: WSLLSRLATSFSSSM*LASSWEVMKDWDGF Trigger: GAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 72 bp | TGGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCTCTaGAGGCACAGTTCTTCTGTCTCCTCCATCAGCTTG | + |
Preference number: 6 (lower is better) Translates to: WFRRSSSSLCSL*RHSSSVSSISL Trigger: CAAGCTGATGGAGGAGACAGAAGAACTGTGCCTTCAGAGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | GCGGTGGAATCGGCAGCTTTTGATGCGGCGAGTGGCTaGCTTATGGATGTACACGGAGTTCTTCATGATGAC | + |
Preference number: 6 (lower is better) Translates to: AVESAAFDAASG*LMDVHGVLHDD Trigger: GTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | GGTGGCTGCTCACTCTGGTTGGTCAAGGGCTGTGGCTaGTTCTTATCTTCCTCCAGCATCTCTAGGGTTTTC | + |
Preference number: 6 (lower is better) Translates to: GGCSLWLVKGCG*FLSSSSISRVF Trigger: GAAAACCCTAGAGATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | AAGCTTTCTTTGATGATGAAAAACCGCCGGGACCACTaGGCCGAGGATCTCCCGAACGGCCGTTTCCACAGA | + |
Preference number: 6 (lower is better) Translates to: KLSLMMKNRRDH*AEDLPNGRFHR Trigger: TCTGTGGAAACGGCCGTTCGGGAGATCCTCGGCCAAGTGGTCCCGGCGGTTTTTCATCATCAAAGAAAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | GGTCACCTTCCCAGACTCCTGCAACATCTCCAGCCATaGTGTCTGCTCAAACTCAGACTCCGCAGCCAACAA | + |
Preference number: 6 (lower is better) Translates to: GHLPRLLQHLQP*CLLKLRLRSQQ Trigger: TTGTTGGCTGCGGAGTCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAAGGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | AGCCGCTTGGCTACCTCCTTCAGCTCCTCTATGTTGTaGGCTTCTAGCTGGGAGGTCATGAAGGACTGGGAT | + |
Preference number: 6 (lower is better) Translates to: SRLATSFSSSML*ASSWEVMKDWD Trigger: ATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 72 bp | CTTAGCCGCTTGGCTACCTCCTTCAGCTCCTCTATGTaGTTGGCTTCTAGCTGGGAGGTCATGAAGGACTGG | + |
Preference number: 6 (lower is better) Translates to: LSRLATSFSSSM*LASSWEVMKDW Trigger: CCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 90 bp | GCTGCCTTATGGATGTACACGGAGTTCTTCATGATGACCGGCATCTaGGCCTCCAGCTCTGCATTCCGGATGCACTCCTCGAAGAACCTT | + |
Preference number: 6 (lower is better) Translates to: AALWMYTEFFMMTGI*ASSSAFRMHSSKNL Trigger: AAGGTTCTTCGAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 90 bp | TCTCTGCTTAGCCGCTTGGCTACCTCCTTCAGCTCCTCTATGTTGTaGGCTTCTAGCTGGGAGGTCATGAAGGACTGGGATGGCTTCATG | + |
Preference number: 6 (lower is better) Translates to: SLLSRLATSFSSSML*ASSWEVMKDWDGFM Trigger: CATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 72 bp | TGGAGAGTTCCTCCAGCGTATGCTGTAAGGACTCTGTaGGGTGTCTCAGCTCCTTCTTCTCTTGTTCCACGC | + |
Preference number: 6 (lower is better) Translates to: WRVPPAYAVRTL*GVSAPSSLVPR Trigger: GCGTGGAACAAGAGAAGAAGGAGCTGAGACACCTCACAGAGTCCTTACAGCATACGCTGGAGGAACTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | GTTCTTCATGATGACCGGCATCTTGGCCTCCAGCTCTaGATTCCGGATGCACTCCTCGAAGAACCTTTTCAG | + |
Preference number: 6 (lower is better) Translates to: VLHDDRHLGLQL*IPDALLEEPFQ Trigger: CTGAAAAGGTTCTTCGAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | AGACATTCCCATGGAAGTCCTGGTGTGAGATCTTCATaGCATAGGGCATACTGGGCTCTTCTCTGGCCTCCA | + |
Preference number: 6 (lower is better) Translates to: RHSHGSPGVRSS*HRAYWALLWPP Trigger: TGGAGGCCAGAGAAGAGCCCAGTATGCCCTATGCCATGAAGATCTCACACCAGGACTTCCATGGGAATGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | AATCGGCAGCTTTTGATGCGGCGAGTGGCTGCCTTATaGATGTACACGGAGTTCTTCATGATGACCGGCATC | + |
Preference number: 6 (lower is better) Translates to: NRQLLMRRVAAL*MYTEFFMMTGI Trigger: GATGCCGGTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 90 bp | GACTCTGTGAGGTGTCTCAGCTCCTTCTTCTCTTGTTCCACGCCCTaGAGGCATCTTGCAGTGAGTTCTAGCTCCCTTTTGATCTGCTCC | + |
Preference number: 6 (lower is better) Translates to: DSVRCLSSFFSCSTP*RHLAVSSSSLLICS Trigger: GGAGCAGATCAAAAGGGAGCTAGAACTCACTGCAAGATGCCTCAAGGGCGTGGAACAAGAGAAGAAGGAGCTGAGACACCTCACAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CAA 90 bp | ATTTTTCCAGGTCACCTTCCCAGACTCCTGCAACATCTCCAGCCATaGTGTCTGCTCAAACTCAGACTCCGCAGCCAACAAGACATTCCC | + |
Preference number: 6 (lower is better) Translates to: IFPGHLPRLLQHLQP*CLLKLRLRSQQDIP Trigger: GGGAATGTCTTGTTGGCTGCGGAGTCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAAGGTGACCTGGAAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS TCA 72 bp | GCTCCTCTATGTTGTTGGCTTCTAGCTGGGAGGTCATaGAGGACTGGGATGGCTTCATGTCATTCCAGGAAG | + |
Preference number: 6 (lower is better) Translates to: APLCCWLLAGRS*RTGMASCHSRK Trigger: CTTCCTGGAATGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | TTCCCAGACTCCTGCAACATCTCCAGCCATTGTGTCTaGTCAAACTCAGACTCCGCAGCCAACAAGACATTC | + |
Preference number: 6 (lower is better) Translates to: FPDSCNISSHCV*SNSDSAANKTF Trigger: GAATGTCTTGTTGGCTGCGGAGTCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | AGCTGGGCATTTTTCCAGGTCACCTTCCCAGACTCCTaGAACATCTCCAGCCATTGTGTCTGCTCAAACTCA | + |
Preference number: 6 (lower is better) Translates to: SWAFFQVTFPDS*NISSHCVCSNS Trigger: TGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAAGGTGACCTGGAAAAATGCCCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | ACCTCCTTCAGCTCCTCTATGTTGTTGGCTTCTAGCTaGGAGGTCATGAAGGACTGGGATGGCTTCATGTCA | + |
Preference number: 6 (lower is better) Translates to: TSFSSSMLLASS*EVMKDWDGFMS Trigger: TGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | TCTTCTGTCTCCTCCATCAGCTTGTCTAAATATTCCTaGTTTTCCTTAGCCAGCTGTAGCCCCTGTGCCTCC | + |
Preference number: 6 (lower is better) Translates to: SSVSSISLSKYS*FSLASCSPCAS Trigger: GGAGGCACAGGGGCTACAGCTGGCTAAGGAAAAGCAGGAATATTTAGACAAGCTGATGGAGGAGACAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS CCA 72 bp | ATGTTGTTGGCTTCTAGCTGGGAGGTCATGAAGGACTaGGATGGCTTCATGTCATTCCAGGAAGTACTGGAC | + |
Preference number: 6 (lower is better) Translates to: MLLASSWEVMKD*DGFMSFQEVLD Trigger: GTCCAGTACTTCCTGGAATGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |
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CDS GCA 72 bp | GTTTTCTTCTTCTCTATGGAGAGTTCCTCCAGCGTATaGTGTAAGGACTCTGTGAGGTGTCTCAGCTCCTTC | + |
Preference number: 6 (lower is better) Translates to: VFFFSMESSSSV*CKDSVRCLSSF Trigger: GAAGGAGCTGAGACACCTCACAGAGTCCTTACAGCATACGCTGGAGGAACTCTCCATAGAGAAGAAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140770.2 |