RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHD1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066438

Ensembl transcript IDs: ENSMUST00000140770.2, ENSMUST00000142760.2

Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGCCCGCATCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATTaGGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGAA +
Preference number: 1 (lower is better)
Translates to: PPASVLPSPCSEPWN*GLVPGSARPPLPPE
Trigger: TTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGATGCGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR GCA 90 bp AACCTTGGAATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTaGCTCCCGAAGCCGCCTCTCAAGGTCCATGCGTACTTTCACTTC +
Preference number: 1 (lower is better)
Translates to: NLGIEALFQAPQGRL*LPKPPLKVHAYFHF
Trigger: GAAGTGAAAGTACGCATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR TCA 90 bp ACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGTaGATAGGAGGCCTGGGTGGCCTTACAGCCAGGACAGCCCCCAGG +
Preference number: 1 (lower is better)
Translates to: TLQQVAGAIYGETHL*IGGLGGLTARTAPR
Trigger: CCTGGGGGCTGTCCTGGCTGTAAGGCCACCCAGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 90 bp ACCGGAGCTTCTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTaGGGTCAAGGACTCTCAATCGGGGCTGGAAAAGAACAAAGTGGG +
Preference number: 1 (lower is better)
Translates to: TGASSRSGCADFGKP*GQGLSIGAGKEQSG
Trigger: CCCACTTTGTTCTTTTCCAGCCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAGAAGCTCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 90 bp CCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATaGAGAAACCCATTTGTGAATAGGAGGCCTGGGTGGCCTTACAGC +
Preference number: 1 (lower is better)
Translates to: PTLLLHPPAGCWSYI*RNPFVNRRPGWPYS
Trigger: GCTGTAAGGCCACCCAGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 90 bp AAGACTGTCACAGATAAGGAGCACACGCCTCAGTCCTTGGCCTCCTaGAGGGTAGTGGTCTTCCATAAAACCCGCAGGCTGGTGTTACAG +
Preference number: 1 (lower is better)
Translates to: KTVTDKEHTPQSLAS*RVVVFHKTRRLVLQ
Trigger: CTGTAACACCAGCCTGCGGGTTTTATGGAAGACCACTACCCTTCAGGAGGCCAAGGACTGAGGCGTGTGCTCCTTATCTGTGACAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 90 bp CTCCAGAGCCCGAGAGCGTTCCTCATTCTCCTTCATCCCGTGTCGTaGATGACAGCTAGAACTCAAGCCCAGCTATCTAACTCGAAGGCA +
Preference number: 1 (lower is better)
Translates to: LQSPRAFLILLHPVS*MTARTQAQLSNSKA
Trigger: TGCCTTCGAGTTAGATAGCTGGGCTTGAGTTCTAGCTGTCATTCACGACACGGGATGAAGGAGAATGAGGAACGCTCTCGGGCTCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR CCA 90 bp AGGGTAGACCCAAAGTCAGGGCTCGGGCATGGAGAGATGGCTCAGTaGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGTTTGATT +
Preference number: 1 (lower is better)
Translates to: RVDPKSGLGHGEMAQ*LRALVALPGDPGLI
Trigger: AATCAAACCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCCTGACTTTGGGTCTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 90 bp AGAGCCCGAGAGCGTTCCTCATTCTCCTTCATCCCGTGTCGTGAATaGCAGCTAGAACTCAAGCCCAGCTATCTAACTCGAAGGCAGACA +
Preference number: 1 (lower is better)
Translates to: RARERSSFSFIPCRE*QLELKPSYLTRRQT
Trigger: TGTCTGCCTTCGAGTTAGATAGCTGGGCTTGAGTTCTAGCTGTCATTCACGACACGGGATGAAGGAGAATGAGGAACGCTCTCGGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR CCA 90 bp ATCTTCTTGACCAACAGATATACCACACAGAGCCAGGCCTCATCATaGCAACTAGGTAGCACCCAGTGTGGACCCACCTCACCTAGGGTA +
Preference number: 1 (lower is better)
Translates to: IFLTNRYTTQSQASS*QLGSTQCGPTSPRV
Trigger: TACCCTAGGTGAGGTGGGTCCACACTGGGTGCTACCTAGTTGCCATGATGAGGCCTGGCTCTGTGTGGTATATCTGTTGGTCAAGAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 90 bp ACAAAGTGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTaGAGCTATATATGGAGAAACCCATTTGTGAATAGGAGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: TKWDPTLLLHPPAGC*SYIWRNPFVNRRPG
Trigger: CCCAGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 90 bp GAGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTaGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGG +
Preference number: 1 (lower is better)
Translates to: ECPVPVKVRRRCWIS*QMKSHMVGFELPCG
Trigger: CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 90 bp AAGGTGTTGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTaGGCTACCATGTGGGTGCTGGGAACCAAGTCTGGGTGCCCCGAA +
Preference number: 1 (lower is better)
Translates to: KVLDLLANEVTYGWF*ATMWVLGTKSGCPE
Trigger: TTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR GCA 90 bp TCAATCGGGGCTGGAAAAGAACAAAGTGGGATCCCACACTTCTCCTaGACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCAT +
Preference number: 1 (lower is better)
Translates to: SIGAGKEQSGIPHFS*TLQQVAGAIYGETH
Trigger: ATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGTTCTTTTCCAGCCCCGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR GCA 90 bp AGAACAAAGTGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTaGTGGAGCTATATATGGAGAAACCCATTTGTGAATAGGAGGCCT +
Preference number: 1 (lower is better)
Translates to: RTKWDPTLLLHPPAG*WSYIWRNPFVNRRP
Trigger: AGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 90 bp ATATGGTTGGTTTTGAGCTACCATGTGGGTGCTGGGAACCAAGTCTaGGTGCCCCGAAAGAGAGAAACAAGTGCTCTTAACCACTGTCCA +
Preference number: 1 (lower is better)
Translates to: IWLVLSYHVGAGNQV*VPRKRETSALNHCP
Trigger: TGGACAGTGGTTAAGAGCACTTGTTTCTCTCTTTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 90 bp GTACCATGTGAGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTaGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTA +
Preference number: 1 (lower is better)
Translates to: VPCECPVPVKVRRRC*ISWQMKSHMVGFEL
Trigger: TAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTCACATGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 90 bp GTAAGTGTATGGATGTTTTGTCTGCATGTATGTACATGTACCATGTaGGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTC +
Preference number: 1 (lower is better)
Translates to: VSVWMFCLHVCTCTM*VPGACEGQEKVLDL
Trigger: GAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTCACATGGTACATGTACATACATGCAGACAAAACATCCATACACTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 90 bp ACCTGGGGTTATATCTTAGAGCCTCCTTTTCCCTCTCCAAGAACATaGAATAAGTGCAGGGCATGGACAAATGTTGTACTGGAGGATCAG +
Preference number: 1 (lower is better)
Translates to: TWGYILEPPFPSPRT*NKCRAWTNVVLEDQ
Trigger: CTGATCCTCCAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTGGAGAGGGAAAAGGAGGCTCTAAGATATAACCCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 90 bp CCAGAGGAACTATTCAGTCCTCATGGAACAGACAATTTATCTTCTTaGCCAACAGATATACCACACAGAGCCAGGCCTCATCATGGCAAC +
Preference number: 1 (lower is better)
Translates to: PEELFSPHGTDNLSS*PTDIPHRARPHHGN
Trigger: GTTGCCATGATGAGGCCTGGCTCTGTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGTTCCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 90 bp TCACCGAGGGGTATGGTAGGTACCAGAGGAACTATTCAGTCCTCATaGAACAGACAATTTATCTTCTTGACCAACAGATATACCACACAG +
Preference number: 1 (lower is better)
Translates to: SPRGMVGTRGTIQSS*NRQFIFLTNRYTTQ
Trigger: CTGTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGTTCCTCTGGTACCTACCATACCCCTCGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR TCA 90 bp TCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGAAGCCGCCTCTCAAGGTCCATGGCTGCTTCTCTGCAGTaGGCTCCTGCAGCGAGTTCT +
Preference number: 2 (lower is better)
Translates to: SRLRKAASASRSRLSRSMAASLQ*APAASS
Trigger: AGAACTCGCTGCAGGAGCTCACTGCAGAGAAGCAGC...CATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR-3UTR GCA 90 bp CTTGGAATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGAAGCGCCTGCTGCTTCTCTaGAGTGAGCTCCTGCAGCGA +
Preference number: 2 (lower is better)
Translates to: LGIEALFQAPQGRLCLPKRLLLL*SELLQR
Trigger: TCGCTGCAGGAGCTCACTGCAGAGAAGCAGCAGGCG...CTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR CAA 90 bp TCCGCCCGCATCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATaGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGA +
Preference number: 2 (lower is better)
Translates to: SARIRSSFSLFRTLE*RPCSRLRKAASASR
Trigger: TCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGATGCGGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR CAA 90 bp CTCACGTCCGCCCGCATCCGTTCTTCCTTCTCCTTGTTCCGAACCTaGGAATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: LTSARIRSSFSLFRT*ELRPCSRLRKAASA
Trigger: GGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGATGCGGGCGGACGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR-3UTR TCA 90 bp CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAAGGTCAGGGCTCTGGGTaGGGCAGAGGGGGTATCGCC +
Preference number: 2 (lower is better)
Translates to: LPDLAVRTLGNPGVKDSQGQGSG*GRGGIA
Trigger: GGCGATACCCCCTCTGCCTCACCCAGAGCCCTGACC...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR GCA 90 bp CCGGATGCACTCCTCGAAGAACCTTTTCAGGTGGCTCACGTCCGCCCGCATCCGTCTGCAGTGAGCTCCTaGAGCGAGTTCTGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: PDALLEEPFQVAHVRPHPSAVSS*SEFCRA
Trigger: AGCCCTGCAGAACTCGCTGCAGGAGCTCACTGCAGA...CGGATGCGGGCGGACGTGAGCCACCTGAAAAGGTTCTTCGAGGAGTGCATCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR-3UTR GCA 90 bp GCCGCCTCTGCCTCCCGAAGCCGCCTCTCAAGGTCCATGCGTACTTTCACTTCAAGTTCCCGCTCCGCCTaGTGCTTCTCTGCAGTGAGC +
Preference number: 2 (lower is better)
Translates to: AASASRSRLSRSMRTFTSSSRSA*CFSAVS
Trigger: GCTCACTGCAGAGAAGCAGCAGGCGGAGCGGGAACT...TGAAGTGAAAGTACGCATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR CAA 90 bp CATCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATTGAGGCCTaGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGAAGCCGCCT +
Preference number: 2 (lower is better)
Translates to: HPFFLLLVPNLGIEA*FQAPQGRLCLPKPP
Trigger: AGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR-3UTR GCA 90 bp GCCGCCTCTGCCTCCCGAAGCCGCCTCTCAAGGTCCATGCGTACTTTCACTTCATCCTGCAGCGAGTTCTaGAGGGCTTGGGACTGGCTT +
Preference number: 2 (lower is better)
Translates to: AASASRSRLSRSMRTFTSSCSEF*RAWDWL
Trigger: AAGCCAGTCCCAAGCCCTGCAGAACTCGCTGCAGGA...TGAAGTGAAAGTACGCATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR-3UTR GCA 90 bp GGGCTCGGGCATGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGGCGTCAGACCTCCCTaGTGCCCCACCAAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: GLGHGEMAQWLRALVALPGVRPP*CPTKER
Trigger: TCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCC...TGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR GCA 90 bp GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCAGCCCCCAGGAATACTaGAGAGAGGGTGTGGGGTGC +
Preference number: 2 (lower is better)
Translates to: VETDRLRQLLRDGPQKTVSPQEY*REGVGC
Trigger: GCACCCCACACCCTCTCTGCAGTATTCCTGGGGGCT...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR TCA 90 bp TTGTTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGGAGGAGGCAGCAAGGTaGGCCAGCTGGGAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: LFVETDRLRQLLRDGPQKEEAAR*ASWERD
Trigger: GTCTCTCTCCCAGCTGGCTCACCTTGCTGCCTCCTC...CTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR TCA 90 bp GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCCAGTCCTTGGCCTCCTaGAGGGTAGTGGTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: VETDRLRQLLRDGPQKTVQSLAS*RVVVFH
Trigger: ATGGAAGACCACTACCCTTCAGGAGGCCAAGGACTG...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR GCA 90 bp TTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTAGAGAGACAGACCTCTaGGCTCTCAGGGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: FVETDRLRQLLRDGPQKTRETDL*ALRAAG
Trigger: CCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCT...AGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CCA 90 bp GGTTCTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGCATGTGGTGGGTTCCTaGCTGCATTGGTCCACTGAG +
Preference number: 2 (lower is better)
Translates to: GSSTGLLPSLPQDASVFWHVVGS*LHWSTE
Trigger: CTCAGTGGACCAATGCAGCCAGGAACCCACCACATG...CCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR GCA 90 bp GGTTCTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGTTCCAGATCTGGCTGTaGGGACTTTGGGAAACCCTG +
Preference number: 2 (lower is better)
Translates to: GSSTGLLPSLPQDASVFWFQIWL*GLWETL
Trigger: CAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAA...CCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR TCA 90 bp AGAGAGAAACAAGTGCTCTTAACCACTGTCCACATCTCCGCCCCCTCCCCAAGTCCCAATATTCTCTTCTaGCCTCCAAGGTCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: REKQVLLTTVHISAPSPSPNILF*PPRSGL
Trigger: GAGCCCTGACCTTGGAGGTCAGAAGAGAATATTGGG...ACTTGGGGAGGGGGCGGAGATGTGGACAGTGGTTAAGAGCACTTGTTTCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CAA 90 bp GCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGTTaGATTTCCAGCACCCACACGGTAGCTTACAACCATCCACGACTC +
Preference number: 2 (lower is better)
Translates to: AQWLRALVALPGDPG*ISSTHTVAYNHPRL
Trigger: GAGTCGTGGATGGTTGTAAGCTACCGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR GCA 90 bp GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCACATGAGCTACCATGTGGGTaGTGGGAACCAAGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: VPVKVRRRCWISWQMKSHELPCG*WEPSLG
Trigger: ACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTC...ATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CCA 90 bp CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGTGCTGGAGCTATATATaGAGAAACCCATTTGTGAAT +
Preference number: 2 (lower is better)
Translates to: PAGRETDLCALRAAGSQQCWSYI*RNPFVN
Trigger: ATTCACAAATGGGTTTCTCCATATATAGCTCCAGCA...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CCA 90 bp GGTTCTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGATAAAACCCGCAGGCTaGTGTTACAGTGTCACTCTG +
Preference number: 2 (lower is better)
Translates to: GSSTGLLPSLPQDASVFWIKPAG*CYSVTL
Trigger: CAGAGTGACACTGTAACACCAGCCTGCGGGTTTTAT...CCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CCA 90 bp GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCCTACCATGTGGGTGCTaGGAACCAAGTCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: VPSSRCFSLLDRKWMPLILPCGC*EPSLGA
Trigger: GGCACCCAGACTTGGTTCCCAGCACCCACATGGTAG...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR GCA 90 bp CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGATCCCACACTTCTCCTaGACCCTCCAGCAGGTTGCT +
Preference number: 2 (lower is better)
Translates to: LKMLQSSGQKMDAFDLALIPHFS*TLQQVA
Trigger: AGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGAT...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CCA 90 bp TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGCATGTTCCCATGTGGTaGGTTCCTGGCTGCATTGGT +
Preference number: 2 (lower is better)
Translates to: WISWQMKSHMVGFELPCGHVPMW*VPGCIG
Trigger: ACCAATGCAGCCAGGAACCCACCACATGGGAACATG...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR TCA 90 bp CTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGGACAATTTATCTTCTTaGCCAACAGATATACCACAC +
Preference number: 2 (lower is better)
Translates to: LPRGYFRPFLKMLQSSGQDNLSS*PTDIPH
Trigger: GTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTC...CTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CAA 90 bp TTCCCTCTCCAAGAACATGGAATAAGTGCAGGGCATGGACAAATGTaGTACTGGAGGATCAGGAACGAAGAGAGAGTTAGGGGGTGTTAT +
Preference number: 2 (lower is better)
Translates to: FPLQEHGISAGHGQM*YWRIRNEERVRGCY
Trigger: ATAACACCCCCTAACTCTCTCTTCGTTCCTGATCCTCCAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTGGAGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CCA 90 bp CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGGGAGAGATGGCTCAGTaGTTAAGAGCACTTGTTGCT +
Preference number: 2 (lower is better)
Translates to: LKMLQSSGQKMDAFDLALGEMAQ*LRALVA
Trigger: AGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCC...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CAA 90 bp ACCAGAGGAACTATTCAGTCCTCATGGAACAGACAATTTATCTTCTaGACCAACAGATATACCACACAGAGCCAGGCCTCATCATGGCAA +
Preference number: 2 (lower is better)
Translates to: TRGTIQSSWNRQFIF*TNRYTTQSQASSWQ
Trigger: TTGCCATGATGAGGCCTGGCTCTGTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGTTCCTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR TCA 90 bp TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGGTTACAGTGTCACTCTaGCAATGCTCTACCAAACAA +
Preference number: 2 (lower is better)
Translates to: WISWQMKSHMVGFELPCGVTVSL*QCSTKQ
Trigger: TTGTTTGGTAGAGCATTGTCAGAGTGACACTGTAAC...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CCA 90 bp TTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTACTATTCAGTCCTCATaGAACAGACAATTTATCTTC +
Preference number: 2 (lower is better)
Translates to: FVETDRLRQLLRDGPQKTTIQSS*NRQFIF
Trigger: GAAGATAAATTGTCTGTTCCATGAGGACTGAATAGT...AGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp GAGAATGAGGGTGCCCCCTCACACCCAGCAGTGCTCTaGTGGAGAAGACCCAGGGGCGTCAGACCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: ENEGAPSHPAVL*WRRPRGVRPPC
Trigger: GCAGGGAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGCTGGGTGTGAGGGGGCACCCTCATTCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR GCA 72 bp CCTTCGAGAATGAGGGTGCCCCCTCACACCCAGCAGTaGTCTGGTGGAGAAGACCCAGGGGCGTCAGACCTC +
Preference number: 3 (lower is better)
Translates to: PSRMRVPPHTQQ*SGGEDPGASDL
Trigger: GAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGCTGGGTGTGAGGGGGCACCCTCATTCTCGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR GCA 72 bp ATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTaGCTCCCGAAGCCGCCTCTCAAGGTCCATGCGTAC +
Preference number: 3 (lower is better)
Translates to: IEALFQAPQGRL*LPKPPLKVHAY
Trigger: GTACGCATGGACCTTGAGAGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR-3UTR CAA 90 bp AACCTTGGAATTGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCGGGGCTTGGGACTGGCTaGAGTAGAATTCCCGTTCCT +
Preference number: 3 (lower is better)
Translates to: NLGIEALFQAPQGRLCLPGLGTG*SRIPVP
Trigger: AGGAACGGGAATTCTACTCAAGCCAGTCCCAAGCCC...CGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR TCA 72 bp CTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGGCCTaGCTGTGGGTAACACCGGAGCTTCTTCCAGATCTG +
Preference number: 3 (lower is better)
Translates to: LCALRAAGSQQA*LWVTPELLPDL
Trigger: CAGATCTGGAAGAAGCTCCGGTGTTACCCACAGTCAGGCCTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp CACCGGAGCTTCTTCCAGATCTGGCTGTGCGGACTTTaGGAAACCCTGGGGTCAAGGACTCTCAATCGGGGC +
Preference number: 3 (lower is better)
Translates to: HRSFFQIWLCGL*ETLGSRTLNRG
Trigger: GCCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAGAAGCTCCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CAA 90 bp GATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCGGGGCCAGGAGACCCAGGTTaGATTTCCAGCACCCACACG +
Preference number: 3 (lower is better)
Translates to: DLAVRTLGNPGVKDSQSGPGDPG*ISSTHT
Trigger: CGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGG...CCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp GCATTCCGGATGCACTCCTCGAAGAACCTTTTCAGGTaGCTCACGTCCGCCCGCATCCGTTCTTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: AFRMHSSKNLFR*LTSARIRSSFS
Trigger: GGAGAAGGAAGAACGGATGCGGGCGGACGTGAGCCACCTGAAAAGGTTCTTCGAGGAGTGCATCCGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR TCA 72 bp TCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATTaGGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCTG +
Preference number: 3 (lower is better)
Translates to: SVLPSPCSEPWN*GLVPGSARPPL
Trigger: CAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR TCA 72 bp ACAGATAAGGAGCACACGCCTCAGTCCTTGGCCTCCTaGAGGGTAGTGGTCTTCCATAAAACCCGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: TDKEHTPQSLAS*RVVVFHKTRRL
Trigger: CAGCCTGCGGGTTTTATGGAAGACCACTACCCTTCAGGAGGCCAAGGACTGAGGCGTGTGCTCCTTATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp CCAAAGTCAGGGCTCGGGCATGGAGAGATGGCTCAGTaGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCA +
Preference number: 3 (lower is better)
Translates to: PKSGLGHGEMAQ*LRALVALPGDP
Trigger: TGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCCTGACTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CAA 90 bp GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCACATCTGGCTGTGCGGACTTaGGGAAACCCTGGGGTCAAG +
Preference number: 3 (lower is better)
Translates to: VPVKVRRRCWISWQMKSHLAVRT*GNPGVK
Trigger: CTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAG...ATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp ATATGGAGAAACCCATTTGTGAATAGGAGGCCTGGGTaGCCTTACAGCCAGGACAGCCCCCAGGAATACTGC +
Preference number: 3 (lower is better)
Translates to: IWRNPFVNRRPG*PYSQDSPQEYC
Trigger: GCAGTATTCCTGGGGGCTGTCCTGGCTGTAAGGCCACCCAGGCCTCCTATTCACAAATGGGTTTCTCCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp TCAAGGACTCTCAATCGGGGCTGGAAAAGAACAAAGTaGGATCCCACACTTCTCCTGCACCCTCCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: SRTLNRGWKRTK*DPTLLLHPPAG
Trigger: ACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGTTCTTTTCCAGCCCCGATTGAGAGTCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp TCTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTaGGGTCAAGGACTCTCAATCGGGGCTGGAAAAGAA +
Preference number: 3 (lower is better)
Translates to: SSRSGCADFGKP*GQGLSIGAGKE
Trigger: TTCTTTTCCAGCCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp GAGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTaGATCTCCTGGCAAATGAAGTCACATATGGTTGGT +
Preference number: 3 (lower is better)
Translates to: ECPVPVKVRRRC*ISWQMKSHMVG
Trigger: ACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 72 bp CAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGTaGATAGGAGGCCTGGGTGGCCTTACAGCCAGGACA +
Preference number: 3 (lower is better)
Translates to: QVAGAIYGETHL*IGGLGGLTART
Trigger: TGTCCTGGCTGTAAGGCCACCCAGGCCTCCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 72 bp CCGAGAGCGTTCCTCATTCTCCTTCATCCCGTGTCGTaGATGACAGCTAGAACTCAAGCCCAGCTATCTAAC +
Preference number: 3 (lower is better)
Translates to: PRAFLILLHPVS*MTARTQAQLSN
Trigger: GTTAGATAGCTGGGCTTGAGTTCTAGCTGTCATTCACGACACGGGATGAAGGAGAATGAGGAACGCTCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR GCA 72 bp GCTGGAAAAGAACAAAGTGGGATCCCACACTTCTCCTaGACCCTCCAGCAGGTTGCTGGAGCTATATATGGA +
Preference number: 3 (lower is better)
Translates to: AGKEQSGIPHFS*TLQQVAGAIYG
Trigger: TCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCACTTTGTTCTTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR GCA 72 bp AAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGTaGTGGGAACCAAGTCTGGGTGCCCCGAAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: KSHMVGFELPCG*WEPSLGAPKER
Trigger: TCTCTCTTTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATATGTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp GTTTTGAGCTACCATGTGGGTGCTGGGAACCAAGTCTaGGTGCCCCGAAAGAGAGAAACAAGTGCTCTTAAC +
Preference number: 3 (lower is better)
Translates to: VLSYHVGAGNQV*VPRKRETSALN
Trigger: GTTAAGAGCACTTGTTTCTCTCTTTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp TCACATATGGTTGGTTTTGAGCTACCATGTGGGTGCTaGGAACCAAGTCTGGGTGCCCCGAAAGAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: SHMVGFELPCGC*EPSLGAPKERN
Trigger: GTTTCTCTCTTTCGGGGCACCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 72 bp GATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTaGGCTACCATGTGGGTGCTGGGAACCAAGTCTGGG +
Preference number: 3 (lower is better)
Translates to: DLLANEVTYGWF*ATMWVLGTKSG
Trigger: CCCAGACTTGGTTCCCAGCACCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 72 bp TGGATGTTTTGTCTGCATGTATGTACATGTACCATGTaGGTGCCCGGTGCCTGTGAAGGTCAGGAGAAGGTG +
Preference number: 3 (lower is better)
Translates to: WMFCLHVCTCTM*VPGACEGQEKV
Trigger: CACCTTCTCCTGACCTTCACAGGCACCGGGCACTCACATGGTACATGTACATACATGCAGACAAAACATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR TCA 72 bp GAGCGTTCCTCATTCTCCTTCATCCCGTGTCGTGAATaGCAGCTAGAACTCAAGCCCAGCTATCTAACTCGA +
Preference number: 3 (lower is better)
Translates to: ERSSFSFIPCRE*QLELKPSYLTR
Trigger: TCGAGTTAGATAGCTGGGCTTGAGTTCTAGCTGTCATTCACGACACGGGATGAAGGAGAATGAGGAACGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
3UTR GCA 72 bp TGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTaGTGGAGCTATATATGGAGAAACCCATTTGTGAAT +
Preference number: 3 (lower is better)
Translates to: WDPTLLLHPPAG*WSYIWRNPFVN
Trigger: ATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR GCA 72 bp TGTTTTGTCTGCATGTATGTACATGTACCATGTGAGTaGCCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTGG +
Preference number: 3 (lower is better)
Translates to: CFVCMYVHVPCE*PVPVKVRRRCW
Trigger: CCAACACCTTCTCCTGACCTTCACAGGCACCGGGCACTCACATGGTACATGTACATACATGCAGACAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR GCA 72 bp TTCTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATaGTTCAGTCTTCTGGACAGAAAATGGATGCCTTTG +
Preference number: 3 (lower is better)
Translates to: FFHGATSVPSSR*FSLLDRKWMPL
Trigger: CAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp GATCCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTaGAGCTATATATGGAGAAACCCATTTGTGAATAGG +
Preference number: 3 (lower is better)
Translates to: DPTLLLHPPAGC*SYIWRNPFVNR
Trigger: CCTATTCACAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR GCA 72 bp GAGCCTCCTTTTCCCTCTCCAAGAACATGGAATAAGTaGAGGGCATGGACAAATGTTGTACTGGAGGATCAG +
Preference number: 3 (lower is better)
Translates to: EPPFPSPRTWNK*RAWTNVVLEDQ
Trigger: CTGATCCTCCAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTGGAGAGGGAAAAGGAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTaGCAAATGAAGTCACATATGGTTGGTTTTGAGCTA +
Preference number: 3 (lower is better)
Translates to: VPVKVRRRCWIS*QMKSHMVGFEL
Trigger: TAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp TATATCTTAGAGCCTCCTTTTCCCTCTCCAAGAACATaGAATAAGTGCAGGGCATGGACAAATGTTGTACTG +
Preference number: 3 (lower is better)
Translates to: YILEPPFPSPRT*NKCRAWTNVVL
Trigger: CAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTGGAGAGGGAAAAGGAGGCTCTAAGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR-3UTR CAA 90 bp GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCAAGTGTATGGATGTTTaGTCTGCATGTATGTACATG +
Preference number: 3 (lower is better)
Translates to: VPSSRCFSLLDRKWMPLIKCMDV*SACMYM
Trigger: CATGTACATACATGCAGACAAAACATCCATACACTT...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CCA 72 bp GGTATGGTAGGTACCAGAGGAACTATTCAGTCCTCATaGAACAGACAATTTATCTTCTTGACCAACAGATAT +
Preference number: 3 (lower is better)
Translates to: GMVGTRGTIQSS*NRQFIFLTNRY
Trigger: ATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGTTCCTCTGGTACCTACCATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp GCAGTGCTCTGGTGGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCCTCCAGGGACGGCGATaGCGACACGGAGTTGGACTT +
Preference number: 4 (lower is better)
Translates to: AVLWWRRPRGVRPPCCPTLQGRR*RHGVGL
Trigger: AAGTCCAACTCCGTGTCGCCATCGCCGTCCCTGGAG...GGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR TCA 90 bp CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGGGAATCGGCAGCTTTTaGTGCGGCGAGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PAGRETDLCALRAAGSQQGIGSF*CGEWLP
Trigger: AGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCC...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp TCTTCCAGGAGACCCAGGTTTGATTTCCAGCACCCACACGGTAGCTTACAACCAGCGTCCGCGTCCGCCTaGTCCAGGGACGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: SSRRPRFDFQHPHGSLQPASASA*SRDGDG
Trigger: GCCATCGCCGTCCCTGGAGCAGGCGGACGCGGACGC...TGGTTGTAAGCTACCGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGTCCTGCAGCGAGTTCTaGAGGGCTTGGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: GEDPGASDLPAAPPRKDRSCSEF*RAWDWL
Trigger: AAGCCAGTCCCAAGCCCTGCAGAACTCGCTGCAGGA...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGGCTGCTCACTCTGGTTaGTCAAGGGCTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GEDPGASDLPAAPPRKDRAAHSG*SRAVAG
Trigger: ACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGC...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR TCA 90 bp CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGTCCGAACCTTGGAATTaGGGCCTTGTTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PAGRETDLCALRAAGSQQSEPWN*GLVPGS
Trigger: GGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGA...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp AGGCAGCAAGGTGAGCCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCATGGCATAGGGCATACTaGGCTCTTCTCTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQQGEPAGRETDLCALRAWHRAY*ALLWPP
Trigger: TGGAGGCCAGAGAAGAGCCCAGTATGCCCTATGCCA...TGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGGCTCACCTTGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGAAGAACCTTTTCAGGTaGCTCACGTCCGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: PAGRETDLCALRAAGSQQKNLFR*LTSARI
Trigger: GATGCGGGCGGACGTGAGCCACCTGAAAAGGTTCTT...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CAA 72 bp TTCCTTCTCCTTGTTCCGAACCTTGGAATTGAGGCCTaGTTCCAGGCTCCGCAAGGCCGCCTCTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: FLLLVPNLGIEA*FQAPQGRLCLP
Trigger: CGGGAGGCAGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
CDS-3UTR TCA 90 bp GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCGCTGCACTTTGGTGCTaGTGTCCAGCGCGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: VETDRLRQLLRDGPQKTVAALWC*CPARPR
Trigger: ACGCGGACGCGCTGGACATCAGCACCAAAGTGCAGC...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR TCA 90 bp GAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGAGCTGTAAGGACTCTGTaGGGTGTCTCAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EKTQGRQTSLLPHQGKIGAVRTL*GVSAPS
Trigger: AGAAGGAGCTGAGACACCTCACAGAGTCCTTACAGC...TCCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAACGCCTGCTGCTTCTCTaGAGTGAGCTCCTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: LPDLAVRTLGNPGVKDSQRLLLL*SELLQR
Trigger: TCGCTGCAGGAGCTCACTGCAGAGAAGCAGCAGGCG...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGGCTCTGCATTCCGGATaGACTCCTCGAAGAACCTTT +
Preference number: 4 (lower is better)
Translates to: GEDPGASDLPAAPPRKDRALHSG*TPRRTF
Trigger: AAAGGTTCTTCGAGGAGTGCATCCGGAATGCAGAGC...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp GATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCGGGGTATGGAGACCATCACTaGCCGGTGGCTGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: DLAVRTLGNPGVKDSQSGYGDHH*PVAAHS
Trigger: AGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATA...CCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CAA 72 bp ACACCGGAGCTTCTTCCAGATCTGGCTGTGCGGACTTaGGGAAACCCTGGGGTCAAGGACTCTCAATCGGGG +
Preference number: 4 (lower is better)
Translates to: TPELLPDLAVRT*GNPGVKDSQSG
Trigger: CCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAGAAGCTCCGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCTGCAGTGAGCTCCTaGAGCGAGTTCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LPDLAVRTLGNPGVKDSQSAVSS*SEFCRA
Trigger: AGCCCTGCAGAACTCGCTGCAGGAGCTCACTGCAGA...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGCCGCAAGGCCGCCTCTaGCTCCCGAAGCCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: WISWQMKSHMVGFELPCGPQGRL*LPKPPL
Trigger: GAGAGGCGGCTTCGGGAGGCAGAGGCGGCCTTGCGG...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAACTTGGCCTCCAGCTCTaGATTCCGGATGCACTCCTC +
Preference number: 4 (lower is better)
Translates to: LPDLAVRTLGNPGVKDSQLGLQL*IPDALL
Trigger: GAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAG...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp CCGGTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCATCGGCCTCCAGCACTTaGTTCAGGCGCTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PVPVKVRRRCWISWQMKSSASST*FRRSSS
Trigger: GGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGA...TGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR TCA 90 bp CTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGCTAGCTGGGAGGTCATaGAGGACTGGGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPRGYFRPFLKMLQSSGQLAGRS*RTGMAS
Trigger: TGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAG...CTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp GCAGTGCTCTGGTGGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCTTGTCTAAATATTCCTaGTTTTCCTTAGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AVLWWRRPRGVRPPCCPTLSKYS*FSLASC
Trigger: ACAGCTGGCTAAGGAAAAGCAGGAATATTTAGACAA...GGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp GGGCTCGGGCATGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGATGCGGCGAGTGGCTaGCTTATGGATGTACACGGA +
Preference number: 4 (lower is better)
Translates to: GLGHGEMAQWLRALVALPDAASG*LMDVHG
Trigger: TCCGTGTACATCCATAAGGCAGCCACTCGCCGCATC...TGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp TGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGGGAAGCGCTGGTCTCTaGTTAGCCGCTTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: WRDGSVVKSTCCSSRRPRGSAGL*LAAWLP
Trigger: AGGTAGCCAAGCGGCTAAGCAGAGACCAGCGCTTCC...CCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp GAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGAGAGGTCATGAAGGACTaGGATGGCTTCATGTCATTC +
Preference number: 4 (lower is better)
Translates to: EKTQGRQTSLLPHQGKIGEVMKD*DGFMSF
Trigger: GAATGACATGAAGCCATCCCAGTCCTTCATGACCTC...TCCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp TGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGCTCTGCTTAGCCGCTTaGCTACCTCCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: WDPTLLLHPPAGCWSYIWLCLAA*LPPSAP
Trigger: AGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAG...CCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CAA 72 bp ATCCGTTCTTCCTTCTCCTTGTTCCGAACCTTGGAATaGAGGCCTTGTTCCAGGCTCCGCAAGGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: IRSSFSLFRTLE*RPCSRLRKAAS
Trigger: AGAGGCGGCCTTGCGGAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACGGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142760.2
CDS-3UTR GCA 90 bp CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAAAGCTCCCTTTTGATCTaGTCCTGCTCCACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LPDLAVRTLGNPGVKDSQSSLLI*SCSTLS
Trigger: GCTGAGAGTGGAGCAGGAGCAGATCAAAAGGGAGCT...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCACATGGTGGCTGCTCACTCTaGTTGGTCAAGGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VPVKVRRRCWISWQMKSHGGCSL*LVKGCG
Trigger: GCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACC...ATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR TCA 90 bp CTTCCAGATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCTCTCTGTTCCCTCTaGAGGCACAGTTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LPDLAVRTLGNPGVKDSQSLCSL*RHSSSV
Trigger: GACAGAAGAACTGTGCCTTCAGAGGGAACAGAGAGA...TTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR TCA 90 bp TGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGGCTCTTCGATCTGCCTaGGGTTGCTATGGAGACCAT +
Preference number: 4 (lower is better)
Translates to: WRDGSVVKSTCCSSRRPRALRSA*GCYGDH
Trigger: ATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGC...CCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR TCA 90 bp TTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGGCTTGGGACTGGCTTaGGTAGAATTCCCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FVETDRLRQLLRDGPQKTGLGLA*VEFPFL
Trigger: GAGGAACGGGAATTCTACTCAAGCCAGTCCCAAGCC...AGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGACCGCCGGGACCACTTaGCCGAGGATCTCCCGAACG +
Preference number: 4 (lower is better)
Translates to: LKMLQSSGQKMDAFDLALTAGTT*PRISRT
Trigger: CGTTCGGGAGATCCTCGGCCAAGTGGTCCCGGCGGT...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp CTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGGGTGTGAGATCTTCATaGCATAGGGCATACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LPRGYFRPFLKMLQSSGQGVRSS*HRAYWA
Trigger: AGCCCAGTATGCCCTATGCCATGAAGATCTCACACC...CTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGTTTTCTTCTTCTCTATaGAGAGTTCCTCCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: PAGRETDLCALRAAGSQQFSSSL*RVPPAY
Trigger: ATACGCTGGAGGAACTCTCCATAGAGAAGAAGAAAA...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp CTTCCACGGGGCTACTTCCGTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGCGAGTGGCTGCCTTATaGATGTACACGGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPRGYFRPFLKMLQSSGQRVAAL*MYTEFF
Trigger: GAAGAACTCCGTGTACATCCATAAGGCAGCCACTCG...CTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGACGGAAGTAGCCCCGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp TTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGACCACCTCCTCAAACTaGTGTTTCTCGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FSCTLQQVAGAIYGETHLTTSSN*CFSASS
Trigger: GCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTGGT...CAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp AGAGAGAAACAAGTGCTCTTAACCACTGTCCACATCTCCGCCCCCTCCCCAAGTGTTGGTCAAGGGCTGTaGCTGGTTCTTATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: REKQVLLTTVHISAPSPSVGQGL*LVLIFL
Trigger: GAGGAAGATAAGAACCAGCCACAGCCCTTGACCAAC...ACTTGGGGAGGGGGCGGAGATGTGGACAGTGGTTAAGAGCACTTGTTTCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCCTGGACCGGCGGCGGTaGAATCGGCAGCTTTTGATG +
Preference number: 4 (lower is better)
Translates to: VPSSRCFSLLDRKWMPLILDRRR*NRQLLM
Trigger: CATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAG...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR TCA 90 bp TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGGCTGCTTCTCTGCAGTaGGCTCCTGCAGCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WISWQMKSHMVGFELPCGAASLQ*APAASS
Trigger: AGAACTCGCTGCAGGAGCTCACTGCAGAGAAGCAGC...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp AGGATCAGGAACGAAGAGAGAGTTAGGGGGTGTTATGTGACCAGGGTCAGCACAATCCGCTCTTCGATCTaGCTGAGGTTGCTATGGAGA +
Preference number: 4 (lower is better)
Translates to: RIRNEERVRGCYVTRVSTIRSSI*LRLLWR
Trigger: TCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGAT...TGTGCTGACCCTGGTCACATAACACCCCCTAACTCTCTCTTCGTTCCTGATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGAGTTCCCGCTCCGCCTaGTGCTTCTCTGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LKMLQSSGQKMDAFDLALSSRSA*CFSAVS
Trigger: GCTCACTGCAGAGAAGCAGCAGGCGGAGCGGGAACT...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCAACAAGACATTCCCATaGAAGTCCTGGTGTGAGATC +
Preference number: 4 (lower is better)
Translates to: VETDRLRQLLRDGPQKTVNKTFP*KSWCEI
Trigger: GATCTCACACCAGGACTTCCATGGGAATGTCTTGTT...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp TCTTCCAGGAGACCCAGGTTTGATTTCCAGCACCCACACGGTAGCTTACAACCATTGTTGGCTTCTAGCTaGGAGGTCATGAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SSRRPRFDFQHPHGSLQPLLASS*EVMKDW
Trigger: CCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAA...TGGTTGTAAGCTACCGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR GCA 90 bp TGGATCTCCTGGCAAATGAAGTCACATATGGTTGGTTTTGAGCTACCATGTGGGTCCACTCTCAGCTCTTaGACCACCTCCTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: WISWQMKSHMVGFELPCGSTLSS*TTSSNC
Trigger: GCAGTTTGAGGAGGTGGTGCAAGAGCTGAGAGTGGA...CCCACATGGTAGCTCAAAACCAACCATATGTGACTTCATTTGCCAGGAGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCGTCAAGGGCTGTGGCTaGTTCTTATCTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VPSSRCFSLLDRKWMPLIVKGCG*FLSSSS
Trigger: GCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGAC...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CAA 72 bp TTAAGAGCACTTGTTGCTCTTCCAGGAGACCCAGGTTaGATTTCCAGCACCCACACGGTAGCTTACAACCAT +
Preference number: 4 (lower is better)
Translates to: LRALVALPGDPG*ISSTHTVAYNH
Trigger: ATGGTTGTAAGCTACCGTGTGGGTGCTGGAAATCAAACCTGGGTCTCCTGGAAGAGCAACAAGTGCTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CCA 90 bp GTCCCTTCCTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCGCTCCTCTATGTTGTTaGCTTCTAGCTGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VPSSRCFSLLDRKWMPLIAPLCC*LLAGRS
Trigger: TGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGC...GATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAGGAAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR TCA 90 bp CTCAAGATGCTTCAGTCTTCTGGACAGAAAATGGATGCCTTTGATCTAGCACTGATGGAAGTCCTGGTGTaGGATCTTCATGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: LKMLQSSGQKMDAFDLALMEVLV*DLHGIG
Trigger: CCCTATGCCATGAAGATCTCACACCAGGACTTCCAT...CAGTGCTAGATCAAAGGCATCCATTTTCTGTCCAGAAGACTGAAGCATCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CAA 72 bp CAAGAACATGGAATAAGTGCAGGGCATGGACAAATGTaGTACTGGAGGATCAGGAACGAAGAGAGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: QEHGISAGHGQM*YWRIRNEERVR
Trigger: CCTAACTCTCTCTTCGTTCCTGATCCTCCAGTACAACATTTGTCCATGCCCTGCACTTATTCCATGTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
3UTR CAA 72 bp ACTATTCAGTCCTCATGGAACAGACAATTTATCTTCTaGACCAACAGATATACCACACAGAGCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TIQSSWNRQFIF*TNRYTTQSQAS
Trigger: TGAGGCCTGGCTCTGTGTGGTATATCTGTTGGTCAAGAAGATAAATTGTCTGTTCCATGAGGACTGAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 90 bp CGAACGGCCGTTTCCACAGAACCCCGTAGAGCTGCACTTTGGTGCTaGTGTCCAGCGCGTCCGCGTCCGCCTGCTCCAGGGACGGCGATG +
Preference number: 5 (lower is better)
Translates to: RTAVSTEPRRAALWC*CPARPRPPAPGTAM
Trigger: CATCGCCGTCCCTGGAGCAGGCGGACGCGGACGCGCTGGACATCAGCACCAAAGTGCAGCTCTACGGGGTTCTGTGGAAACGGCCGTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGAACCGCCGGGACCACTaGGCCGAGGATCTCCCGAAC +
Preference number: 5 (lower is better)
Translates to: GEDPGASDLPAAPPRKDRNRRDH*AEDLPN
Trigger: GTTCGGGAGATCCTCGGCCAAGTGGTCCCGGCGGTT...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGTGGAATCGGCAGCTTTaGATGCGGCGAGTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PAGRETDLCALRAAGSQQWNRQL*MRRVAA
Trigger: GGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCA...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp GGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGATGATGACCGGCATCTaGGCCTCCAGCTCTGCATTC +
Preference number: 5 (lower is better)
Translates to: GEDPGASDLPAAPPRKDRMMTGI*ASSSAF
Trigger: GAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCAT...CCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 90 bp GCCAGAAGCTTCTCCGCCAATAGCTCCTGCATCCGCTCTTCGATCTaGCTGAGGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: ARSFSANSSCIRSSI*LRLLWRPSLAGGCS
Trigger: TGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAAGCTTCTGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp GCAGTGCTCTGGTGGAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAGCAGAAAGCTTTCTTaGATGATGAAAAACCGCCGG +
Preference number: 5 (lower is better)
Translates to: AVLWWRRPRGVRPPCCPTSRKLS*MMKNRR
Trigger: CCGGCGGTTTTTCATCATCAAAGAAAGCTTTCTGCT...GGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTCCACCAGAGCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp GAGAAGACCCAGGGGCGTCAGACCTCCCTGCTGCCCCACCAAGGAAAGATAGGAGGGCTTGGGACTGGCTaGAGTAGAATTCCCGTTCCT +
Preference number: 5 (lower is better)
Translates to: EKTQGRQTSLLPHQGKIGGLGTG*SRIPVP
Trigger: AGGAACGGGAATTCTACTCAAGCCAGTCCCAAGCCC...TCCTATCTTTCCTTGGTGGGGCAGCAGGGAGGTCTGACGCCCCTGGGTCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 90 bp GAAGCTTCTCCGCCAATAGCTCCTGCATCCGCTCTTCGATCTGCCTaGGGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCT +
Preference number: 5 (lower is better)
Translates to: EASPPIAPASALRSA*GCYGDHHWPVAAHS
Trigger: AGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 90 bp ATCTGCTCCTGCTCCACTCTCAGCTCTTGCACCACCTCCTCAAACTaGTGTTTCTCGGCCTCCAGCACTTGGTTCAGGCGCTCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: ICSCSTLSSCTTSSN*CFSASSTWFRRSSS
Trigger: GGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTGGTGCAAGAGCTGAGAGTGGAGCAGGAGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 90 bp GGACCGGCGGCGGTGGAATCGGCAGCTTTTGATGCGGCGAGTGGCTaGCTTATGGATGTACACGGAGTTCTTCATGATGACCGGCATCTT +
Preference number: 5 (lower is better)
Translates to: GPAAVESAAFDAASG*LMDVHGVLHDDRHL
Trigger: AAGATGCCGGTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 90 bp GCCAATAGCTCCTGCATCCGCTCTTCGATCTGCCTGAGGTTGCTATaGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: ANSSCIRSSICLRLL*RPSLAGGCSLWLVK
Trigger: CTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 90 bp CGGCGGTGGAATCGGCAGCTTTTGATGCGGCGAGTGGCTGCCTTATaGATGTACACGGAGTTCTTCATGATGACCGGCATCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RRWNRQLLMRRVAAL*MYTEFFMMTGILAS
Trigger: GGAGGCCAAGATGCCGGTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 90 bp TGGGATGGCTTCATGTCATTCCAGGAAGTACTGGACCGGCGGCGGTaGAATCGGCAGCTTTTGATGCGGCGAGTGGCTGCCTTATGGATG +
Preference number: 5 (lower is better)
Translates to: WDGFMSFQEVLDRRR*NRQLLMRRVAALWM
Trigger: CATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTCCTGGAATGACATGAAGCCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp CCAGCTGGGAGAGAGACAGACCTCTGCGCTCTCAGGGCAGCAGGGTCACAACAGAGTTCTAGCTCCCTTTaGATCTGCTCCTGCTCCACT +
Preference number: 5 (lower is better)
Translates to: PAGRETDLCALRAAGSQQSSSSL*ICSCST
Trigger: AGTGGAGCAGGAGCAGATCAAAAGGGAGCTAGAACT...CTGTTGTGACCCTGCTGCCCTGAGAGCGCAGAGGTCTGTCTCTCTCCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 90 bp CATTCCAGGAAGTACTGGACCGGCGGCGGTGGAATCGGCAGCTTTTaGTGCGGCGAGTGGCTGCCTTATGGATGTACACGGAGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: HSRKYWTGGGGIGSF*CGEWLPYGCTRSSS
Trigger: TGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTCCTGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 90 bp TCGATCTGCCTGAGGTTGCTATGGAGACCATCACTGGCCGGTGGCTaGTCACTCTGGTTGGTCAAGGGCTGTGGCTGGTTCTTATCTTCC +
Preference number: 5 (lower is better)
Translates to: SICLRLLWRPSLAGG*SLWLVKGCGWFLSS
Trigger: GGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 90 bp CTGAGGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTaGTTGGTCAAGGGCTGTGGCTGGTTCTTATCTTCCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: LRLLWRPSLAGGCSL*LVKGCGWFLSSSSI
Trigger: GATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 90 bp CTCTTCGATCTGCCTGAGGTTGCTATGGAGACCATCACTGGCCGGTaGCTGCTCACTCTGGTTGGTCAAGGGCTGTGGCTGGTTCTTATC +
Preference number: 5 (lower is better)
Translates to: LFDLPEVAMETITGR*LLTLVGQGLWLVLI
Trigger: GATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp GATCTGGCTGTGCGGACTTTGGGAAACCCTGGGGTCAAGGACTCTCAATCGGGGAGCTCCTCTATGTTGTaGGCTTCTAGCTGGGAGGTC +
Preference number: 5 (lower is better)
Translates to: DLAVRTLGNPGVKDSQSGSSSML*ASSWEV
Trigger: GACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCT...CCCCGATTGAGAGTCCTTGACCCCAGGGTTTCCCAAAGTCCGCACAGCCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 90 bp GGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTTaGTCAAGGGCTGTGGCTGGTTCTTATCTTCCTCCAGCATCTCTA +
Preference number: 5 (lower is better)
Translates to: GCYGDHHWPVAAHSG*SRAVAGSYLPPASL
Trigger: TAGAGATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp GTGCCTGTGAAGGTCAGGAGAAGGTGTTGGATCTCCTGGCAAATGAAGTCACATGGCTGCTCACTCTGGTaGGTCAAGGGCTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: VPVKVRRRCWISWQMKSHGCSLW*VKGCGW
Trigger: CCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCC...ATGTGACTTCATTTGCCAGGAGATCCAACACCTTCTCCTGACCTTCACAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 90 bp AGTTCTAGCTCCCTTTTGATCTGCTCCTGCTCCACTCTCAGCTCTTaGACCACCTCCTCAAACTGCTGTTTCTCGGCCTCCAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: SSSSLLICSCSTLSS*TTSSNCCFSASSTW
Trigger: CCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTGGTGCAAGAGCTGAGAGTGGAGCAGGAGCAGATCAAAAGGGAGCTAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 90 bp TCCTTCATCCGCTTCTCAGCCAGAAGCTTCTCCGCCAATAGCTCCTaGATCCGCTCTTCGATCTGCCTGAGGTTGCTATGGAGACCATCA +
Preference number: 5 (lower is better)
Translates to: SFIRFSARSFSANSS*IRSSICLRLLWRPS
Trigger: TGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAAGCTTCTGGCTGAGAAGCGGATGAAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 90 bp GTACACGGAGTTCTTCATGATGACCGGCATCTTGGCCTCCAGCTCTaGATTCCGGATGCACTCCTCGAAGAACCTTTTCAGGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: VHGVLHDDRHLGLQL*IPDALLEEPFQVAH
Trigger: GTGAGCCACCTGAAAAGGTTCTTCGAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAACTCCGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 90 bp TGTGATAGATGGATTCCCGGAAGCGCTGGTCTCTGCTTAGCCGCTTaGCTACCTCCTTCAGCTCCTCTATGTTGTTGGCTTCTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: CDRWIPGSAGLCLAA*LPPSAPLCCWLLAG
Trigger: CCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGACCAGCGCTTCCGGGAATCCATCTATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp TGGGATCCCACACTTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGTGTGCCTCCAGGCTTTaGATCATAGCTTCCCCTAGC +
Preference number: 5 (lower is better)
Translates to: WDPTLLLHPPAGCWSYIWCASRL*IIASPS
Trigger: GCTAGGGGAAGCTATGATCAAAAGCCTGGAGGCACA...CCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAAGTGTGGGATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp GTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGACTGTCTCTTGTTCCACGCCCTaGAGGCATCTTGCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: VETDRLRQLLRDGPQKTVSCSTP*RHLAVS
Trigger: ACTCACTGCAAGATGCCTCAAGGGCGTGGAACAAGA...GACAGTCTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp GGGCTCGGGCATGGAGAGATGGCTCAGTGGTTAAGAGCACTTGTTGCTCTTCCATTCCGAACCTTGGAATaGAGGCCTTGTTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GLGHGEMAQWLRALVALPFRTLE*RPCSRL
Trigger: GAGCCTGGAACAAGGCCTCAATTCCAAGGTTCGGAA...TGGAAGAGCAACAAGTGCTCTTAACCACTGAGCCATCTCTCCATGCCCGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 90 bp CAGGTCACCTTCCCAGACTCCTGCAACATCTCCAGCCATTGTGTCTaGTCAAACTCAGACTCCGCAGCCAACAAGACATTCCCATGGAAG +
Preference number: 5 (lower is better)
Translates to: QVTFPDSCNISSHCV*SNSDSAANKTFPWK
Trigger: CTTCCATGGGAATGTCTTGTTGGCTGCGGAGTCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAAGGTGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 90 bp TCACTGGCCGGTGGCTGCTCACTCTGGTTGGTCAAGGGCTGTGGCTaGTTCTTATCTTCCTCCAGCATCTCTAGGGTTTTCTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SLAGGCSLWLVKGCG*FLSSSSISRVFFFS
Trigger: AGAGAAGAAGAAAACCCTAGAGATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 90 bp CCTCCTTCAGCTCCTCTATGTTGTTGGCTTCTAGCTGGGAGGTCATaGAGGACTGGGATGGCTTCATGTCATTCCAGGAAGTACTGGACC +
Preference number: 5 (lower is better)
Translates to: PPSAPLCCWLLAGRS*RTGMASCHSRKYWT
Trigger: GGTCCAGTACTTCCTGGAATGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 90 bp CGCTTGGCTACCTCCTTCAGCTCCTCTATGTTGTTGGCTTCTAGCTaGGAGGTCATGAAGGACTGGGATGGCTTCATGTCATTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: RLATSFSSSMLLASS*EVMKDWDGFMSFQE
Trigger: TTCCTGGAATGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp TTGTTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGTCGATCTGCCTGAGGTaGCTATGGAGACCATCACTG +
Preference number: 5 (lower is better)
Translates to: LFVETDRLRQLLRDGPQKSICLR*LWRPSL
Trigger: CAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGA...CTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp TTGTTTGTCGAGACTGATAGACTCAGGCAGCTTCTGAGGGATGGGCCCCAAAAGTTCAGCTCCTCTATGTaGTTGGCTTCTAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LFVETDRLRQLLRDGPQKFSSSM*LASSWE
Trigger: CTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAA...CTTTTGGGGCCCATCCCTCAGAAGCTGCCTGAGTCTATCAGTCTCGACAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 90 bp TCCAGCACTTGGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCTCTaGAGGCACAGTTCTTCTGTCTCCTCCATCAGCTTGTCTAAATAT +
Preference number: 5 (lower is better)
Translates to: SSTWFRRSSSSLCSL*RHSSSVSSISLSKY
Trigger: ATATTTAGACAAGCTGATGGAGGAGACAGAAGAACTGTGCCTTCAGAGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCAAGTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp TTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGCAACATCTCCAGCCATaGTGTCTGCTCAAACTCAGA +
Preference number: 5 (lower is better)
Translates to: FSCTLQQVAGAIYGETHLQHLQP*CLLKLR
Trigger: TCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTG...CAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS-3UTR CAA 90 bp TTCTCCTGCACCCTCCAGCAGGTTGCTGGAGCTATATATGGAGAAACCCATTTGCGTTCTTCCTTCTCCTaGTTCCGAACCTTGGAATTG +
Preference number: 5 (lower is better)
Translates to: FSCTLQQVAGAIYGETHLRSSFS*FRTLEL
Trigger: CAATTCCAAGGTTCGGAACAAGGAGAAGGAAGAACG...CAAATGGGTTTCTCCATATATAGCTCCAGCAACCTGCTGGAGGGTGCAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp ACTTTGGTGCTGATGTCCAGCGCGTCCGCGTCCGCCTaGTCCAGGGACGGCGATGGCGACACGGAGTTGGAC +
Preference number: 6 (lower is better)
Translates to: TLVLMSSASASA*SRDGDGDTELD
Trigger: GTCCAACTCCGTGTCGCCATCGCCGTCCCTGGAGCAGGCGGACGCGGACGCGCTGGACATCAGCACCAAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp CTGCCTGAGGTTGCTATGGAGACCATCACTGGCCGGTaGCTGCTCACTCTGGTTGGTCAAGGGCTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: LPEVAMETITGR*LLTLVGQGLWL
Trigger: CAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 72 bp CCGCCAATAGCTCCTGCATCCGCTCTTCGATCTGCCTaGGGTTGCTATGGAGACCATCACTGGCCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: PPIAPASALRSA*GCYGDHHWPVA
Trigger: AGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 72 bp AAGTACTGGACCGGCGGCGGTGGAATCGGCAGCTTTTaGTGCGGCGAGTGGCTGCCTTATGGATGTACACGG +
Preference number: 6 (lower is better)
Translates to: KYWTGGGGIGSF*CGEWLPYGCTR
Trigger: CCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp CTGAGGTTGCTATGGAGACCATCACTGGCCGGTGGCTaGTCACTCTGGTTGGTCAAGGGCTGTGGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: LRLLWRPSLAGG*SLWLVKGCGWF
Trigger: GAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp TCCTGCATCCGCTCTTCGATCTGCCTGAGGTTGCTATaGAGACCATCACTGGCCGGTGGCTGCTCACTCTGG +
Preference number: 6 (lower is better)
Translates to: SCIRSSICLRLL*RPSLAGGCSLW
Trigger: CCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp TTCATGTCATTCCAGGAAGTACTGGACCGGCGGCGGTaGAATCGGCAGCTTTTGATGCGGCGAGTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: FMSFQEVLDRRR*NRQLLMRRVAA
Trigger: GGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTCCTGGAATGACATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp GAAGTACTGGACCGGCGGCGGTGGAATCGGCAGCTTTaGATGCGGCGAGTGGCTGCCTTATGGATGTACACG +
Preference number: 6 (lower is better)
Translates to: EVLDRRRWNRQL*MRRVAALWMYT
Trigger: CGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 90 bp TTCTCCGCCAATAGCTCCTGCATCCGCTCTTCGATCTGCCTGAGGTaGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: FSANSSCIRSSICLR*LWRPSLAGGCSLWL
Trigger: CAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp TGGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTaGGTCAAGGGCTGTGGCTGGTTCTTATCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: WRPSLAGGCSLW*VKGCGWFLSSS
Trigger: GGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 90 bp CTCTTGCACCACCTCCTCAAACTGCTGTTTCTCGGCCTCCAGCACTaGGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCTCTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: LLHHLLKLLFLGLQH*VQALKLLSLFPLKA
Trigger: TGCCTTCAGAGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTGGTGCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 90 bp TCATTCCAGGAAGTACTGGACCGGCGGCGGTGGAATCGGCAGCTTTaGATGCGGCGAGTGGCTGCCTTATGGATGTACACGGAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SFQEVLDRRRWNRQL*MRRVAALWMYTEFF
Trigger: GAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGCCGCCGGTCCAGTACTTCCTGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp TTCTCCGCCAATAGCTCCTGCATCCGCTCTTCGATCTaGCTGAGGTTGCTATGGAGACCATCACTGGCCGGT +
Preference number: 6 (lower is better)
Translates to: FSANSSCIRSSI*LRLLWRPSLAG
Trigger: ACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp CGCTTCTCAGCCAGAAGCTTCTCCGCCAATAGCTCCTaGATCCGCTCTTCGATCTGCCTGAGGTTGCTATGG +
Preference number: 6 (lower is better)
Translates to: RFSARSFSANSS*IRSSICLRLLW
Trigger: CCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATTGGCGGAGAAGCTTCTGGCTGAGAAGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp ACCTCCTCAAACTGCTGTTTCTCGGCCTCCAGCACTTaGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCTC +
Preference number: 6 (lower is better)
Translates to: TSSNCCFSASST*FRRSSSSLCSL
Trigger: GAGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp CTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTaGTTGGTCAAGGGCTGTGGCTGGTTCTTATCTTCC +
Preference number: 6 (lower is better)
Translates to: LWRPSLAGGCSL*LVKGCGWFLSS
Trigger: GGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp CACCTCCTCAAACTGCTGTTTCTCGGCCTCCAGCACTaGGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCT +
Preference number: 6 (lower is better)
Translates to: HLLKLLFLGLQH*VQALKLLSLFP
Trigger: AGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCAAGTGCTGGAGGCCGAGAAACAGCAGTTTGAGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp AATAGCTCCTGCATCCGCTCTTCGATCTGCCTGAGGTaGCTATGGAGACCATCACTGGCCGGTGGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: NSSCIRSSICLR*LWRPSLAGGCS
Trigger: TGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCTCAGGCAGATCGAAGAGCGGATGCAGGAGCTATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 90 bp AGGTTGCTATGGAGACCATCACTGGCCGGTGGCTGCTCACTCTGGTaGGTCAAGGGCTGTGGCTGGTTCTTATCTTCCTCCAGCATCTCT +
Preference number: 6 (lower is better)
Translates to: RLLWRPSLAGGCSLW*VKGCGWFLSSSSIS
Trigger: AGAGATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACCGGCCAGTGATGGTCTCCATAGCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp TGGATTCCCGGAAGCGCTGGTCTCTGCTTAGCCGCTTaGCTACCTCCTTCAGCTCCTCTATGTTGTTGGCTT +
Preference number: 6 (lower is better)
Translates to: WIPGSAGLCLAA*LPPSAPLCCWL
Trigger: AAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGACCAGCGCTTCCGGGAATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp TGGATGTACACGGAGTTCTTCATGATGACCGGCATCTaGGCCTCCAGCTCTGCATTCCGGATGCACTCCTCG +
Preference number: 6 (lower is better)
Translates to: WMYTEFFMMTGI*ASSSAFRMHSS
Trigger: CGAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAACTCCGTGTACATCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp ATGGATTCCCGGAAGCGCTGGTCTCTGCTTAGCCGCTaGGCTACCTCCTTCAGCTCCTCTATGTTGTTGGCT +
Preference number: 6 (lower is better)
Translates to: MDSRKRWSLLSR*ATSFSSSMLLA
Trigger: AGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGACCAGCGCTTCCGGGAATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 90 bp TGGTCTCTGCTTAGCCGCTTGGCTACCTCCTTCAGCTCCTCTATGTaGTTGGCTTCTAGCTGGGAGGTCATGAAGGACTGGGATGGCTTC +
Preference number: 6 (lower is better)
Translates to: WSLLSRLATSFSSSM*LASSWEVMKDWDGF
Trigger: GAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 72 bp TGGTTCAGGCGCTCAAGCTCCTCTCTCTGTTCCCTCTaGAGGCACAGTTCTTCTGTCTCCTCCATCAGCTTG +
Preference number: 6 (lower is better)
Translates to: WFRRSSSSLCSL*RHSSSVSSISL
Trigger: CAAGCTGATGGAGGAGACAGAAGAACTGTGCCTTCAGAGGGAACAGAGAGAGGAGCTTGAGCGCCTGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp GCGGTGGAATCGGCAGCTTTTGATGCGGCGAGTGGCTaGCTTATGGATGTACACGGAGTTCTTCATGATGAC +
Preference number: 6 (lower is better)
Translates to: AVESAAFDAASG*LMDVHGVLHDD
Trigger: GTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATTCCACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp GGTGGCTGCTCACTCTGGTTGGTCAAGGGCTGTGGCTaGTTCTTATCTTCCTCCAGCATCTCTAGGGTTTTC +
Preference number: 6 (lower is better)
Translates to: GGCSLWLVKGCG*FLSSSSISRVF
Trigger: GAAAACCCTAGAGATGCTGGAGGAAGATAAGAACCAGCCACAGCCCTTGACCAACCAGAGTGAGCAGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp AAGCTTTCTTTGATGATGAAAAACCGCCGGGACCACTaGGCCGAGGATCTCCCGAACGGCCGTTTCCACAGA +
Preference number: 6 (lower is better)
Translates to: KLSLMMKNRRDH*AEDLPNGRFHR
Trigger: TCTGTGGAAACGGCCGTTCGGGAGATCCTCGGCCAAGTGGTCCCGGCGGTTTTTCATCATCAAAGAAAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp GGTCACCTTCCCAGACTCCTGCAACATCTCCAGCCATaGTGTCTGCTCAAACTCAGACTCCGCAGCCAACAA +
Preference number: 6 (lower is better)
Translates to: GHLPRLLQHLQP*CLLKLRLRSQQ
Trigger: TTGTTGGCTGCGGAGTCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAAGGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp AGCCGCTTGGCTACCTCCTTCAGCTCCTCTATGTTGTaGGCTTCTAGCTGGGAGGTCATGAAGGACTGGGAT +
Preference number: 6 (lower is better)
Translates to: SRLATSFSSSML*ASSWEVMKDWD
Trigger: ATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 72 bp CTTAGCCGCTTGGCTACCTCCTTCAGCTCCTCTATGTaGTTGGCTTCTAGCTGGGAGGTCATGAAGGACTGG +
Preference number: 6 (lower is better)
Translates to: LSRLATSFSSSM*LASSWEVMKDW
Trigger: CCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 90 bp GCTGCCTTATGGATGTACACGGAGTTCTTCATGATGACCGGCATCTaGGCCTCCAGCTCTGCATTCCGGATGCACTCCTCGAAGAACCTT +
Preference number: 6 (lower is better)
Translates to: AALWMYTEFFMMTGI*ASSSAFRMHSSKNL
Trigger: AAGGTTCTTCGAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 90 bp TCTCTGCTTAGCCGCTTGGCTACCTCCTTCAGCTCCTCTATGTTGTaGGCTTCTAGCTGGGAGGTCATGAAGGACTGGGATGGCTTCATG +
Preference number: 6 (lower is better)
Translates to: SLLSRLATSFSSSML*ASSWEVMKDWDGFM
Trigger: CATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGTAGCCAAGCGGCTAAGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 72 bp TGGAGAGTTCCTCCAGCGTATGCTGTAAGGACTCTGTaGGGTGTCTCAGCTCCTTCTTCTCTTGTTCCACGC +
Preference number: 6 (lower is better)
Translates to: WRVPPAYAVRTL*GVSAPSSLVPR
Trigger: GCGTGGAACAAGAGAAGAAGGAGCTGAGACACCTCACAGAGTCCTTACAGCATACGCTGGAGGAACTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp GTTCTTCATGATGACCGGCATCTTGGCCTCCAGCTCTaGATTCCGGATGCACTCCTCGAAGAACCTTTTCAG +
Preference number: 6 (lower is better)
Translates to: VLHDDRHLGLQL*IPDALLEEPFQ
Trigger: CTGAAAAGGTTCTTCGAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp AGACATTCCCATGGAAGTCCTGGTGTGAGATCTTCATaGCATAGGGCATACTGGGCTCTTCTCTGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: RHSHGSPGVRSS*HRAYWALLWPP
Trigger: TGGAGGCCAGAGAAGAGCCCAGTATGCCCTATGCCATGAAGATCTCACACCAGGACTTCCATGGGAATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp AATCGGCAGCTTTTGATGCGGCGAGTGGCTGCCTTATaGATGTACACGGAGTTCTTCATGATGACCGGCATC +
Preference number: 6 (lower is better)
Translates to: NRQLLMRRVAAL*MYTEFFMMTGI
Trigger: GATGCCGGTCATCATGAAGAACTCCGTGTACATCCATAAGGCAGCCACTCGCCGCATCAAAAGCTGCCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 90 bp GACTCTGTGAGGTGTCTCAGCTCCTTCTTCTCTTGTTCCACGCCCTaGAGGCATCTTGCAGTGAGTTCTAGCTCCCTTTTGATCTGCTCC +
Preference number: 6 (lower is better)
Translates to: DSVRCLSSFFSCSTP*RHLAVSSSSLLICS
Trigger: GGAGCAGATCAAAAGGGAGCTAGAACTCACTGCAAGATGCCTCAAGGGCGTGGAACAAGAGAAGAAGGAGCTGAGACACCTCACAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CAA 90 bp ATTTTTCCAGGTCACCTTCCCAGACTCCTGCAACATCTCCAGCCATaGTGTCTGCTCAAACTCAGACTCCGCAGCCAACAAGACATTCCC +
Preference number: 6 (lower is better)
Translates to: IFPGHLPRLLQHLQP*CLLKLRLRSQQDIP
Trigger: GGGAATGTCTTGTTGGCTGCGGAGTCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAAGGTGACCTGGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS TCA 72 bp GCTCCTCTATGTTGTTGGCTTCTAGCTGGGAGGTCATaGAGGACTGGGATGGCTTCATGTCATTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: APLCCWLLAGRS*RTGMASCHSRK
Trigger: CTTCCTGGAATGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp TTCCCAGACTCCTGCAACATCTCCAGCCATTGTGTCTaGTCAAACTCAGACTCCGCAGCCAACAAGACATTC +
Preference number: 6 (lower is better)
Translates to: FPDSCNISSHCV*SNSDSAANKTF
Trigger: GAATGTCTTGTTGGCTGCGGAGTCTGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp AGCTGGGCATTTTTCCAGGTCACCTTCCCAGACTCCTaGAACATCTCCAGCCATTGTGTCTGCTCAAACTCA +
Preference number: 6 (lower is better)
Translates to: SWAFFQVTFPDS*NISSHCVCSNS
Trigger: TGAGTTTGAGCAGACACAATGGCTGGAGATGTTGCAGGAGTCTGGGAAGGTGACCTGGAAAAATGCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp ACCTCCTTCAGCTCCTCTATGTTGTTGGCTTCTAGCTaGGAGGTCATGAAGGACTGGGATGGCTTCATGTCA +
Preference number: 6 (lower is better)
Translates to: TSFSSSMLLASS*EVMKDWDGFMS
Trigger: TGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACATAGAGGAGCTGAAGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp TCTTCTGTCTCCTCCATCAGCTTGTCTAAATATTCCTaGTTTTCCTTAGCCAGCTGTAGCCCCTGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SSVSSISLSKYS*FSLASCSPCAS
Trigger: GGAGGCACAGGGGCTACAGCTGGCTAAGGAAAAGCAGGAATATTTAGACAAGCTGATGGAGGAGACAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS CCA 72 bp ATGTTGTTGGCTTCTAGCTGGGAGGTCATGAAGGACTaGGATGGCTTCATGTCATTCCAGGAAGTACTGGAC +
Preference number: 6 (lower is better)
Translates to: MLLASSWEVMKD*DGFMSFQEVLD
Trigger: GTCCAGTACTTCCTGGAATGACATGAAGCCATCCCAGTCCTTCATGACCTCCCAGCTAGAAGCCAACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2
CDS GCA 72 bp GTTTTCTTCTTCTCTATGGAGAGTTCCTCCAGCGTATaGTGTAAGGACTCTGTGAGGTGTCTCAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: VFFFSMESSSSV*CKDSVRCLSSF
Trigger: GAAGGAGCTGAGACACCTCACAGAGTCCTTACAGCATACGCTGGAGGAACTCTCCATAGAGAAGAAGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140770.2