Pregenerated sensors for PLEKHA8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005225Ensembl transcript IDs: ENSMUST00000101385.3, ENSMUST00000119706.8
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGCAACAGAAGCAGTGTGCACAGCCACTCCCTCACCTGTGCCTaGCCAAGGCTCGTTGTCTTCAGGGGACTGCTTATGCTGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: HSNRSSVHSHSLTCA*PRLVVFRGLLMLEP Trigger: TGGCTCCAGCATAAGCAGTCCCCTGAAGACAACGAGCCTTGGCCAGGCACAGGTGAGGGAGTGGCTGTGCACACTGCTTCTGTTGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | ATAGTTCTCTGCAGAGCCCTAGTGTGCACAGCAACAGAAGCAGTGTaGACAGCCACTCCCTCACCTGTGCCTGGCCAAGGCTCGTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: IVLCRALVCTATEAV*TATPSPVPGQGSLS Trigger: AGACAACGAGCCTTGGCCAGGCACAGGTGAGGGAGTGGCTGTGCACACTGCTTCTGTTGCTGTGCACACTAGGGCTCTGCAGAGAACTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CCA 90 bp | CAAGGGCACATGGCCCAAAGCGCCCACCCTCAGAGACAAGCGGGCTaGCCACTTTTCTTCTTCTGTCTTTACAGGCTATGTCAAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: QGHMAQSAHPQRQAG*PLFFFCLYRLCQGQ Trigger: CTGCCCTTGACATAGCCTGTAAAGACAGAAGAAGAAAAGTGGCCAGCCCGCTTGTCTCTGAGGGTGGGCGCTTTGGGCCATGTGCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR TCA 90 bp | AGGCAGCTCTCCAGTGGGCACTTAGGGCTTTGTGAGGACCTGGACTaGCACGCTCTCAGAGTGCTAGTCCCTAGACTAGAGATCACAGAG | + |
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Preference number: 1 (lower is better) Translates to: RQLSSGHLGLCEDLD*HALRVLVPRLEITE Trigger: CTCTGTGATCTCTAGTCTAGGGACTAGCACTCTGAGAGCGTGTCAGTCCAGGTCCTCACAAAGCCCTAAGTGCCCACTGGAGAGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | CAAAATCAGTACCTTCCCTGCATAGTTCTCTGCAGAGCCCTAGTGTaGACAGCAACAGAAGCAGTGTGCACAGCCACTCCCTCACCTGTG | + |
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Preference number: 1 (lower is better) Translates to: QNQYLPCIVLCRALV*TATEAVCTATPSPV Trigger: CACAGGTGAGGGAGTGGCTGTGCACACTGCTTCTGTTGCTGTGCACACTAGGGCTCTGCAGAGAACTATGCAGGGAAGGTACTGATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR TCA 90 bp | AGTGAAATTCTCATGGCACAGGGAATCGTCCGTTACCCTACACCATaGAGCTGGCTCATCAGCCATCTAGATCACCCTTCACTGGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: SEILMAQGIVRYPTP*SWLISHLDHPSLAP Trigger: TGGGGCCAGTGAAGGGTGATCTAGATGGCTGATGAGCCAGCTTCATGGTGTAGGGTAACGGACGATTCCCTGTGCCATGAGAATTTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR TCA 90 bp | GAGATCAATGCATGCGAGCGACATCTGTACCAGAGGCATTGCCAGTaGCTGGGTGTTCATGCCTTAGAGTTCCCAAATGCAGCTGTACAG | + |
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Preference number: 1 (lower is better) Translates to: EINACERHLYQRHCQ*LGVHALEFPNAAVQ Trigger: CTGTACAGCTGCATTTGGGAACTCTAAGGCATGAACACCCAGTCACTGGCAATGCCTCTGGTACAGATGTCGCTCGCATGCATTGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | CCAAGAACTACTAATTCAGGTGGAATGAACGTACCAAAGTCAGACTaGCCAGCAAGGCAGCTCTCCAGTGGGCACTTAGGGCTTTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: PRTTNSGGMNVPKSD*PARQLSSGHLGLCE Trigger: CTCACAAAGCCCTAAGTGCCCACTGGAGAGCTGCCTTGCTGGGCAGTCTGACTTTGGTACGTTCATTCCACCTGAATTAGTAGTTCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CCA 90 bp | GGGACTGCTTATGCTGGAGCCACTCTTCTTGTTGCTAGGAAGAAGTaGCCTCCACTTGGGAAGGTATTCATGGCTTCTTCCCTATGCACA | + |
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Preference number: 1 (lower is better) Translates to: GTAYAGATLLVARKK*PPLGKVFMASSLCT Trigger: TGTGCATAGGGAAGAAGCCATGAATACCTTCCCAAGTGGAGGCCACTTCTTCCTAGCAACAAGAAGAGTGGCTCCAGCATAAGCAGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CCA 90 bp | GTAACAAGCCACTACATTCCTACAGTACCCTTCTGGCCTCTCTTCTaGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAAGATGG | + |
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Preference number: 1 (lower is better) Translates to: VTSHYIPTVPFWPLF*AVSRAVSSASVTRW Trigger: CCATCTTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAGAGAGGCCAGAAGGGTACTGTAGGAATGTAGTGGCTTGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | CGAGCGACATCTGTACCAGAGGCATTGCCAGTGACTGGGTGTTCATaGCTTAGAGTTCCCAAATGCAGCTGTACAGCAAGAAATCATGCA | + |
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Preference number: 1 (lower is better) Translates to: RATSVPEALPVTGCS*LRVPKCSCTARNHA Trigger: TGCATGATTTCTTGCTGTACAGCTGCATTTGGGAACTCTAAGGCATGAACACCCAGTCACTGGCAATGCCTCTGGTACAGATGTCGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR TCA 90 bp | CCAAATGACTTATCCTTCCTGTCTATTCTGTTCTCAAGCATGGGCTaGGGTCATTCTCTTGAGCCACTGTCCCACCTGACAACAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: PNDLSFLSILFSSMG*GHSLEPLSHLTTGM Trigger: CATGCCTGTTGTCAGGTGGGACAGTGGCTCAAGAGAATGACCTCAGCCCATGCTTGAGAACAGAATAGACAGGAAGGATAAGTCATTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR TCA 90 bp | GTAGCTGGACTGCAGGTACCGCCGTGGCCCACTCTACTGCTGCATTaGGTAAATACCCACTCGTTTAAAGACAGACAAAATCAGTACCTT | + |
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Preference number: 1 (lower is better) Translates to: VAGLQVPPWPTLLLH*VNTHSFKDRQNQYL Trigger: AAGGTACTGATTTTGTCTGTCTTTAAACGAGTGGGTATTTACTCAATGCAGCAGTAGAGTGGGCCACGGCGGTACCTGCAGTCCAGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | ACCCTTCTGGCCTCTCTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTaGCTCAGTTACAAGATGGTTTCTTCCCTTAAAGATATTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: TLLASLLGCVKSCQL*LSYKMVSSLKDIPP Trigger: AGGAGGAATATCTTTAAGGGAAGAAACCATCTTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAGAGAGGCCAGAAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CCA 90 bp | AATCTCCAAATCTTGGGCTCAAATAATACTTTACTCTCATACTTCTaGGTAGCTGGACTGCAGGTACCGCCGTGGCCCACTCTACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: NLQILGSNNTLLSYF*VAGLQVPPWPTLLL Trigger: CAGCAGTAGAGTGGGCCACGGCGGTACCTGCAGTCCAGCTACCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | GAGGCATTGCCAGTGACTGGGTGTTCATGCCTTAGAGTTCCCAAATaGAGCTGTACAGCAAGAAATCATGCAAATGGTCTGCAGGATAGT | + |
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Preference number: 1 (lower is better) Translates to: EALPVTGCSCLRVPK*SCTARNHANGLQDS Trigger: ACTATCCTGCAGACCATTTGCATGATTTCTTGCTGTACAGCTGCATTTGGGAACTCTAAGGCATGAACACCCAGTCACTGGCAATGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CCA 90 bp | CATGAGGTAGTTGGGCTGTTTAGTGACATTCTAGTGAAATTCTCATaGCACAGGGAATCGTCCGTTACCCTACACCATGAAGCTGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: HEVVGLFSDILVKFS*HRESSVTLHHEAGS Trigger: TGAGCCAGCTTCATGGTGTAGGGTAACGGACGATTCCCTGTGCCATGAGAATTTCACTAGAATGTCACTAAACAGCCCAACTACCTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | TCCATTTCTGGGAGACAGGGCATCTTGTCACTCTTTATAGAAGAATaGCTCAAGCTGTTACACCAGCTGCTGGTCTACTCACTCTCCATT | + |
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Preference number: 1 (lower is better) Translates to: SISGRQGILSLFIEE*LKLLHQLLVYSLSI Trigger: AATGGAGAGTGAGTAGACCAGCAGCTGGTGTAACAGCTTGAGGCATTCTTCTATAAAGAGTGACAAGATGCCCTGTCTCCCAGAAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | GTAAATACCCACTCGTTTAAAGACAGACAAAATCAGTACCTTCCCTaGATAGTTCTCTGCAGAGCCCTAGTGTGCACAGCAACAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: VNTHSFKDRQNQYLP*IVLCRALVCTATEA Trigger: TGCTTCTGTTGCTGTGCACACTAGGGCTCTGCAGAGAACTATGCAGGGAAGGTACTGATTTTGTCTGTCTTTAAACGAGTGGGTATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR TCA 90 bp | AGGTTTGGCTCTCTACGCCCAAATGCGTTAGATGATCAACCAAAGTaGTGGTCCAAAACATACTGCAGTTGCTCAGAACTTCTACATCCA | + |
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Preference number: 1 (lower is better) Translates to: RFGSLRPNALDDQPK*WSKTYCSCSELLHP Trigger: TGGATGTAGAAGTTCTGAGCAACTGCAGTATGTTTTGGACCATCACTTTGGTTGATCATCTAACGCATTTGGGCGTAGAGAGCCAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | CATGAAATACAGGAACAACAACTTGGACAGAGAAGCAGACACATCTaGACACAAGATTTTCACTCAACAAGTGGTCCTAGAAGGCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: HEIQEQQLGQRSRHI*TQDFHSTSGPRRLQ Trigger: TTGGAGCCTTCTAGGACCACTTGTTGAGTGAAAATCTTGTGTGCAGATGTGTCTGCTTCTCTGTCCAAGTTGTTGTTCCTGTATTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | TACAAATGTGAACCCAACAAATCCATCTGTCAATTTTGCTCTTACTaGCTGCTATTCAAGTCTGGGACAGCGATGATCTGGTTTCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: YKCEPNKSICQFCSY*LLFKSGTAMIWFPV Trigger: TACTGGAAACCAGATCATCGCTGTCCCAGACTTGAATAGCAGGCAGTAAGAGCAAAATTGACAGATGGATTTGTTGGGTTCACATTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR GCA 90 bp | ACAGAACAATACAAATGTGAACCCAACAAATCCATCTGTCAATTTTaGTCTTACTGCCTGCTATTCAAGTCTGGGACAGCGATGATCTGG | + |
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Preference number: 1 (lower is better) Translates to: TEQYKCEPNKSICQF*SYCLLFKSGTAMIW Trigger: CCAGATCATCGCTGTCCCAGACTTGAATAGCAGGCAGTAAGAGCAAAATTGACAGATGGATTTGTTGGGTTCACATTTGTATTGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CCA 90 bp | CAAATCCATCTGTCAATTTTGCTCTTACTGCCTGCTATTCAAGTCTaGGACAGCGATGATCTGGTTTCCAGTAGGCCTGTTGAAATATTT | + |
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Preference number: 1 (lower is better) Translates to: QIHLSILLLLPAIQV*DSDDLVSSRPVEIF Trigger: AAATATTTCAACAGGCCTACTGGAAACCAGATCATCGCTGTCCCAGACTTGAATAGCAGGCAGTAAGAGCAAAATTGACAGATGGATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 90 bp | GCAGTGTGCACAGCCACTCCCTCACCTGTGCCTGGCCAAGGCTCGTaGTCTTCAGGGGACTGCTTATGCTGGAGCCACTCTTCTTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: AVCTATPSPVPGQGS*SSGDCLCWSHSSCC Trigger: GCAACAAGAAGAGTGGCTCCAGCATAAGCAGTCCCCTGAAGACAACGAGCCTTGGCCAGGCACAGGTGAGGGAGTGGCTGTGCACACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAAGAGAAAAGCTGAGAGAGGGCGTGCGGATGTCCCCACGATGGTTAAGTGCACTTAGGGCTTTGTaGGGACCTGGACTGACACGC | + |
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Preference number: 2 (lower is better) Translates to: QRREKLREGVRMSPRWLSALRAL*GPGLTR Trigger: GCGTGTCAGTCCAGGTCCTCACAAAGCCCTAAGTGC...ACTTAACCATCGTGGGGACATCCGCACGCCCTCTCTCAGCTTTTCTCTTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAAGAGAAAAGCTGAGAGAGGGCGTGCGGATGTCCCCACGATGGTTAAGTCTGAGGTCATTCTCTTaGGCCACTGTCCCACCTGAC | + |
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Preference number: 2 (lower is better) Translates to: QRREKLREGVRMSPRWLSLRSFS*ATVPPD Trigger: GTCAGGTGGGACAGTGGCTCAAGAGAATGACCTCAG...ACTTAACCATCGTGGGGACATCCGCACGCCCTCTCTCAGCTTTTCTCTTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGCCTCTCTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAATGCAGAGCCCTAGTGTaGACAGCAACAGAAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SGLSSGLCQELSALPQLQCRALV*TATEAV Trigger: CACTGCTTCTGTTGCTGTGCACACTAGGGCTCTGCA...TTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAGAGAGGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 90 bp | GAGAAGAGAGATCAATGCATGCGAGCGACATCTGTACCAGAGGCATaGCCAGTGACTGGGTGTTCATGCCTTAGAGTTCCCAAATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: EKRDQCMRATSVPEA*PVTGCSCLRVPKCS Trigger: GCTGCATTTGGGAACTCTAAGGCATGAACACCCAGTCACTGGCAATGCCTCTGGTACAGATGTCGCTCGCATGCATTGATCTCTCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATGGAGAAGAGAGATCAATGCATGCGAGCGACATCTGTACCAGAGGCATTGGTACCAAAGTCAGACTaGCCAGCAAGGCAGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TMEKRDQCMRATSVPEALVPKSD*PARQLS Trigger: GGAGAGCTGCCTTGCTGGGCAGTCTGACTTTGGTAC...CAATGCCTCTGGTACAGATGTCGCTCGCATGCATTGATCTCTCTTCTCCATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATGGAGAAGAGAGATCAATGCATGCGAGCGACATCTGTACCAGAGGCATTGCCCTGCATAGTTCTCTaGAGAGCCCTAGTGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: TMEKRDQCMRATSVPEALPCIVL*RALVCT Trigger: TGTGCACACTAGGGCTCTGCAGAGAACTATGCAGGG...CAATGCCTCTGGTACAGATGTCGCTCGCATGCATTGATCTCTCTTCTCCATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAAGATGGTTTCTAGAGGCACCTGCAGCTaGCTATCATGGCCATACTTA | + |
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Preference number: 2 (lower is better) Translates to: LLGCVKSCQLCLSYKMVSRGTCS*LSWPYL Trigger: TAAGTATGGCCATGATAGGCAGCTGCAGGTGCCTCT...AGAAACCATCTTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR CCA 90 bp | CTACTCAGTCAACTCTACTGCTCTCTAGCAAGACACATCCCCCACTCTCAAGATGAAGTGGCCTCCACTTaGGAAGGTATTCATGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLSQLYCSLARHIPHSQDEVAST*EGIHGF Trigger: GAAGCCATGAATACCTTCCCAAGTGGAGGCCACTTC...ATCTTGAGAGTGGGGGATGTGTCTTGCTAGAGAGCAGTAGAGTTGACTGAGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 90 bp | TGGGAAGGTATTCATGGCTTCTTCCCTATGCACACTCTAGGCAGCTaGGTCCATTTCTGGGAGACAGGGCATCTTGTCACTCTTTATAGA | + |
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Preference number: 2 (lower is better) Translates to: WEGIHGFFPMHTLGS*VHFWETGHLVTLYR Trigger: TCTATAAAGAGTGACAAGATGCCCTGTCTCCCAGAAATGGACCAAGCTGCCTAGAGTGTGCATAGGGAAGAAGCCATGAATACCTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTCCATTAGCCAGAGAAGAGGATCCATATGAAACTCCTGCAAGAGGAAAGTTCTCAAGCATGGGCTaGGGTCATTCTCTTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PFPLAREEDPYETPARGKFSSMG*GHSLEP Trigger: TGGCTCAAGAGAATGACCTCAGCCCATGCTTGAGAA...CTTTCCTCTTGCAGGAGTTTCATATGGATCCTCTTCTCTGGCTAATGGAAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGTCCTTCAACAAAGGGGCTTACACTCCCTCCAATGCCCAGTCAACATCTATTTGCTCTTACTGCCTaGTATTCAAGTCTGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: ASPSTKGLTLPPMPSQHLFALTA*YSSLGQ Trigger: CTGTCCCAGACTTGAATAGCAGGCAGTAAGAGCAAA...TAGATGTTGACTGGGCATTGGAGGGAGTGTAAGCCCCTTTGTTGAAGGACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGCCTCTCTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAATCCATCTGTCAATTTTaGTCTTACTGCCTGCTATTC | + |
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Preference number: 2 (lower is better) Translates to: SGLSSGLCQELSALPQLQSICQF*SYCLLF Trigger: GAATAGCAGGCAGTAAGAGCAAAATTGACAGATGGA...TTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAGAGAGGCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR GCA 90 bp | CTACTCAGTCAACTCTACTGCTCTCTAGCAAGACACATCCCCCACTCTCAAGATAATCAGTACCTTCCCTaGATAGTTCTCTGCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: LLSQLYCSLARHIPHSQDNQYLP*IVLCRA Trigger: GGCTCTGCAGAGAACTATGCAGGGAAGGTACTGATT...ATCTTGAGAGTGGGGGATGTGTCTTGCTAGAGAGCAGTAGAGTTGACTGAGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTTAATCTCCAAATCTTGGGCTCAAATAATACTTTACTCTCATACTTCTGGGAGCCACTGTCCCACCTaGCAACAGGCATGGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RLISKSWAQIILYSHTSGSHCPT*QQAWQS Trigger: GGACTGCCATGCCTGTTGTCAGGTGGGACAGTGGCT...CCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATTAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATGGAGAAGAGAGATCAATGCATGCGAGCGACATCTGTACCAGAGGCATTGCAATTTTGCTCTTACTaGCTGCTATTCAAGTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TMEKRDQCMRATSVPEALQFCSY*LLFKSG Trigger: CCCAGACTTGAATAGCAGGCAGTAAGAGCAAAATTG...CAATGCCTCTGGTACAGATGTCGCTCGCATGCATTGATCTCTCTTCTCCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR CCA 90 bp | ACAACTTGGACAGAGAAGCAGACACATCTGCACACAAGATTTTCACTCAACAAGAGCTTGGTCCATTTCTaGGAGACAGGGCATCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: TTWTEKQTHLHTRFSLNKSLVHF*ETGHLV Trigger: GACAAGATGCCCTGTCTCCCAGAAATGGACCAAGCT...CTTGTTGAGTGAAAATCTTGTGTGCAGATGTGTCTGCTTCTCTGTCCAAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR TCA 90 bp | ACAATGGAGAAGAGAGATCAATGCATGCGAGCGACATCTGTACCAGAGGCATTGTATGTGTCACCCAAATaGCTTATCCTTCCTGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: TMEKRDQCMRATSVPEALYVSPK*LILPVY Trigger: ATAGACAGGAAGGATAAGTCATTTGGGTGACACATA...CAATGCCTCTGGTACAGATGTCGCTCGCATGCATTGATCTCTCTTCTCCATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAAGATGGTTTCTTCACTTCAATACAGAGGTaGTCTAGATCACATTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SGLCQELSALPQLQDGFFTSIQR*SRSHLE Trigger: TTCCAAATGTGATCTAGATCACCTCTGTATTGAAGT...GAAGAAACCATCTTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAAGATGGTTTCTTCTATCAAAGCTGTTGCTaGAAATTAACTAGGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: SGLCQELSALPQLQDGFFYQSCC*KLTRAT Trigger: TGTTGCCCTAGTTAATTTCCAGCAACAGCTTTGATA...GAAGAAACCATCTTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR TCA 90 bp | TACAACTGCCCAAATGTTTTCACTACACAGCCCTTTCCATCAGCAGAGGAAGGGAGAACAATACAAATGTaGACCCAACAAATCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: YNCPNVFTTQPFPSAEEGRTIQM*TQQIHL Trigger: CAGATGGATTTGTTGGGTTCACATTTGTATTGTTCT...CCCTTCCTCTGCTGATGGAAAGGGCTGTGTAGTGAAAACATTTGGGCAGTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR-3UTR TCA 90 bp | ACAACTTGGACAGAGAAGCAGACACATCTGCACACAAGATTTTCACTCAACAAGACCTGGCTCTTTTGCTaGAGAGTTAATGAAACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TTWTEKQTHLHTRFSLNKTWLFC*RVNETG Trigger: GCCTGTTTCATTAACTCTTCAGCAAAAGAGCCAGGT...CTTGTTGAGTGAAAATCTTGTGTGCAGATGTGTCTGCTTCTCTGTCCAAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAAGATGGTTTCTTTAAAGTCGCTGTTCTaGTATGATGTTCAATTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLGCVKSCQLCLSYKMVSLKSLF*YDVQFR Trigger: TCTGAATTGAACATCATAGCAGAACAGCGACTTTAA...AGAAACCATCTTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAACTTGGACAGAGAAGCAGACACATCTGCACACAAGATTTTCACTCAACAAGATCTACACATCTGAATaGACATACACCGGGCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TTWTEKQTHLHTRFSLNKIYTSE*TYTGLS Trigger: AGAGAGCCCGGTGTATGTCCATTCAGATGTGTAGAT...CTTGTTGAGTGAAAATCTTGTGTGCAGATGTGTCTGCTTCTCTGTCCAAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTCCAAAACATACTGCAGTTGCTCAGAACTTCTACATCCAGACAGCTTAGAAGAAGAGGATCCATATaGAACTCCTGCAAGAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: MVQNILQLLRTSTSRQLRRRGSI*NSCKRK Trigger: TTTCCTCTTGCAGGAGTTTCATATGGATCCTCTTCT...TCTAAGCTGTCTGGATGTAGAAGTTCTGAGCAACTGCAGTATGTTTTGGACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTCCAAAACATACTGCAGTTGCTCAGAACTTCTACATCCAGACAGCTTAGAGGAAATGTACTGCATTaGCAAAGAGTGGTATGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: MVQNILQLLRTSTSRQLRGNVLH*QRVVCV Trigger: GACACATACCACTCTTTGCCAATGCAGTACATTTCC...TCTAAGCTGTCTGGATGTAGAAGTTCTGAGCAACTGCAGTATGTTTTGGACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTTCCATTAGCCAGAGAAGAGGATCCATATGAAACTCCTGCAAGAGGAAAGAAACTAGAATTCAAATaGGAATTTGGCTCTTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: PFPLAREEDPYETPARGKKLEFK*EFGSSA Trigger: GGCTGAAGAGCCAAATTCCCATTTGAATTCTAGTTT...CTTTCCTCTTGCAGGAGTTTCATATGGATCCTCTTCTCTGGCTAATGGAAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CAA 90 bp | TGTTACTTGAATGGCGGCCCCTTTCTCTGGAAGGAGGTGTTTTATTaGGTTTCTGCAGAAGACTGGGAATTCTGTAAACTAGAATTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: CYLNGGPFLWKEVFY*VSAEDWEFCKLEFK Trigger: TTTGAATTCTAGTTTACAGAATTCCCAGTCTTCTGCAGAAACCAAATAAAACACCTCCTTCCAGAGAAAGGGGCCGCCATTCAAGTAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTCCAAAACATACTGCAGTTGCTCAGAACTTCTACATCCAGACAGCTTAGAGTCGCTGTTCTGCTATaGTGTTCAATTCAGATAACA | + |
|
Preference number: 2 (lower is better) Translates to: MVQNILQLLRTSTSRQLRVAVLL*CSIQIT Trigger: TGTTATCTGAATTGAACATCATAGCAGAACAGCGAC...TCTAAGCTGTCTGGATGTAGAAGTTCTGAGCAACTGCAGTATGTTTTGGACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTAATCTCCAAATCTTGGGCTCAAATAATACTTTACTCTCATACTTCTGGGGAGTATCAAAGCTGTTaGTGGAAATTAACTAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RLISKSWAQIILYSHTSGEYQSC*WKLTRA Trigger: TGCCCTAGTTAATTTCCAGCAACAGCTTTGATACTC...CCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATTAACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTAATCTCCAAATCTTGGGCTCAAATAATACTTTACTCTCATACTTCTGGGATTCAAATGGGAATTTaGCTCTTCAGCCTTGTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RLISKSWAQIILYSHTSGIQMGI*LFSLVR Trigger: TCTTACAAGGCTGAAGAGCCAAATTCCCATTTGAAT...CCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATTAACCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTAATCTCCAAATCTTGGGCTCAAATAATACTTTACTCTCATACTTCTGGGATGTTTTCCTACAACTaGCCAAATGTTTTCACTACA | + |
|
Preference number: 2 (lower is better) Translates to: RLISKSWAQIILYSHTSGMFSYN*PNVFTT Trigger: TGTAGTGAAAACATTTGGGCAGTTGTAGGAAAACAT...CCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATTAACCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | TGCAGAGCCCTAGTGTGCACAGCAACAGAAGCAGTGTaGACAGCCACTCCCTCACCTGTGCCTGGCCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CRALVCTATEAV*TATPSPVPGQG Trigger: GCCTTGGCCAGGCACAGGTGAGGGAGTGGCTGTGCACACTGCTTCTGTTGCTGTGCACACTAGGGCTCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | CATACTGACATCAGCCCGTGGGGAGCCAAGCTTCACTaGGTGAGGGTGAAGGGCAGACTGATGGAACGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HTDISPWGAKLH*VRVKGRLMERR Trigger: CCTCCGTTCCATCAGTCTGCCCTTCACCCTCACCCAGTGAAGCTTGGCTCCCCACGGGCTGATGTCAGTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | AGCAAGGCAGCTCTCCAGTGGGCACTTAGGGCTTTGTaGGGACCTGGACTGACACGCTCTCAGAGTGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SKAALQWALRAL*GPGLTRSQSAS Trigger: ACTAGCACTCTGAGAGCGTGTCAGTCCAGGTCCTCACAAAGCCCTAAGTGCCCACTGGAGAGCTGCCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | TCCAGTGGGCACTTAGGGCTTTGTGAGGACCTGGACTaGCACGCTCTCAGAGTGCTAGTCCCTAGACTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSGHLGLCEDLD*HALRVLVPRLE Trigger: CTCTAGTCTAGGGACTAGCACTCTGAGAGCGTGTCAGTCCAGGTCCTCACAAAGCCCTAAGTGCCCACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | GGCAGACTGATGGAACGGAGGTGGGGCTGTGCTCTGTaGGTGGTCTGCCAGTACTACTCAGTCAACTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: GRLMERRWGCAL*VVCQYYSVNST Trigger: AGTAGAGTTGACTGAGTAGTACTGGCAGACCACTCACAGAGCACAGCCCCACCTCCGTTCCATCAGTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | TACCTTCCCTGCATAGTTCTCTGCAGAGCCCTAGTGTaGACAGCAACAGAAGCAGTGTGCACAGCCACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: YLPCIVLCRALV*TATEAVCTATP Trigger: GGGAGTGGCTGTGCACACTGCTTCTGTTGCTGTGCACACTAGGGCTCTGCAGAGAACTATGCAGGGAAGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | TCTGTTCAGTTCAACACACATACTGACATCAGCCCGTaGGGAGCCAAGCTTCACTGGGTGAGGGTGAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVQFNTHTDISP*GAKLHWVRVKG Trigger: GCCCTTCACCCTCACCCAGTGAAGCTTGGCTCCCCACGGGCTGATGTCAGTATGTGTGTTGAACTGAACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGAACGTACCAAAGTCAGACTGCCCAGCAAGGCAGCTCTCCAGTGGGCACTTGAGCCACTCTTCTTGTaGCTAGGAAGAAGTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: NERTKVRLPSKAALQWALEPLFL*LGRSGL Trigger: GAGGCCACTTCTTCCTAGCAACAAGAAGAGTGGCTC...AAGTGCCCACTGGAGAGCTGCCTTGCTGGGCAGTCTGACTTTGGTACGTTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGCCTCTCTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAACTGGAGCCACTCTTCTaGTTGCTAGGAAGAAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SGLSSGLCQELSALPQLQLEPLF*LLGRSG Trigger: GCCACTTCTTCCTAGCAACAAGAAGAGTGGCTCCAG...TTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAGAGAGGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | TGGGCTGAGGTCATTCTCTTGAGCCACTGTCCCACCTaGCAACAGGCATGGCAGTCCATGTCAATGTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: WAEVILLSHCPT*QQAWQSMSMFS Trigger: GGAAAACATTGACATGGACTGCCATGCCTGTTGTCAGGTGGGACAGTGGCTCAAGAGAATGACCTCAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | GCATGCGAGCGACATCTGTACCAGAGGCATTGCCAGTaGCTGGGTGTTCATGCCTTAGAGTTCCCAAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: ACERHLYQRHCQ*LGVHALEFPNA Trigger: TGCATTTGGGAACTCTAAGGCATGAACACCCAGTCACTGGCAATGCCTCTGGTACAGATGTCGCTCGCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | ACTAATTCAGGTGGAATGAACGTACCAAAGTCAGACTaGCCAGCAAGGCAGCTCTCCAGTGGGCACTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TNSGGMNVPKSD*PARQLSSGHLG Trigger: CCCTAAGTGCCCACTGGAGAGCTGCCTTGCTGGGCAGTCTGACTTTGGTACGTTCATTCCACCTGAATTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | CACTACATTCCTACAGTACCCTTCTGGCCTCTCTTCTaGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HYIPTVPFWPLF*AVSRAVSSASV Trigger: AACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAGAGAGGCCAGAAGGGTACTGTAGGAATGTAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | GACAGACAAAATCAGTACCTTCCCTGCATAGTTCTCTaGAGAGCCCTAGTGTGCACAGCAACAGAAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DRQNQYLPCIVL*RALVCTATEAV Trigger: CACTGCTTCTGTTGCTGTGCACACTAGGGCTCTGCAGAGAACTATGCAGGGAAGGTACTGATTTTGTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | TATGCTGGAGCCACTCTTCTTGTTGCTAGGAAGAAGTaGCCTCCACTTGGGAAGGTATTCATGGCTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YAGATLLVARKK*PPLGKVFMASS Trigger: GGAAGAAGCCATGAATACCTTCCCAAGTGGAGGCCACTTCTTCCTAGCAACAAGAAGAGTGGCTCCAGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | ATCTTGGGCTCAAATAATACTTTACTCTCATACTTCTaGGTAGCTGGACTGCAGGTACCGCCGTGGCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: ILGSNNTLLSYF*VAGLQVPPWPT Trigger: AGTGGGCCACGGCGGTACCTGCAGTCCAGCTACCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGCTCAAATAATACTTTACTCTCATACTTCTGGGTAGCTGGACTGCAGGTACCTGGCCAAGGCTCGTaGTCTTCAGGGGACTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGSNNTLLSYFWVAGLQVPGQGS*SSGDCL Trigger: TAAGCAGTCCCCTGAAGACAACGAGCCTTGGCCAGG...TACCTGCAGTCCAGCTACCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | TTATCCTTCCTGTCTATTCTGTTCTCAAGCATGGGCTaGGGTCATTCTCTTGAGCCACTGTCCCACCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSFLSILFSSMG*GHSLEPLSHLT Trigger: TGTCAGGTGGGACAGTGGCTCAAGAGAATGACCTCAGCCCATGCTTGAGAACAGAATAGACAGGAAGGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | CTGCAGGTACCGCCGTGGCCCACTCTACTGCTGCATTaGGTAAATACCCACTCGTTTAAAGACAGACAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LQVPPWPTLLLH*VNTHSFKDRQN Trigger: ATTTTGTCTGTCTTTAAACGAGTGGGTATTTACTCAATGCAGCAGTAGAGTGGGCCACGGCGGTACCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | GGGAGACAGGGCATCTTGTCACTCTTTATAGAAGAATaGCTCAAGCTGTTACACCAGCTGCTGGTCTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GRQGILSLFIEE*LKLLHQLLVYS Trigger: TGAGTAGACCAGCAGCTGGTGTAACAGCTTGAGGCATTCTTCTATAAAGAGTGACAAGATGCCCTGTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | GTCTTTACAGGCTATGTCAAGGGCAGGTCTAAGTTATaGCTTAGCCCTGACCCCTTTCCATTAGCCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VFTGYVKGRSKL*LSPDPFPLARE Trigger: TTCTCTGGCTAATGGAAAGGGGTCAGGGCTAAGGCATAACTTAGACCTGCCCTTGACATAGCCTGTAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | GCCTCTCTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTaGCTCAGTTACAAGATGGTTTCTTCCCTTAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ASLLGCVKSCQL*LSYKMVSSLKD Trigger: ATCTTTAAGGGAAGAAACCATCTTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAGAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | ACAATGAGACACCAAGAACTACTAATTCAGGTGGAATaGACGTACCAAAGTCAGACTGCCCAGCAAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TMRHQELLIQVE*TYQSQTAQQGS Trigger: GCTGCCTTGCTGGGCAGTCTGACTTTGGTACGTTCATTCCACCTGAATTAGTAGTTCTTGGTGTCTCATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | CTGTCAATTTTGCTCTTACTGCCTGCTATTCAAGTCTaGGACAGCGATGATCTGGTTTCCAGTAGGCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LSILLLLPAIQV*DSDDLVSSRPV Trigger: AACAGGCCTACTGGAAACCAGATCATCGCTGTCCCAGACTTGAATAGCAGGCAGTAAGAGCAAAATTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | GAACCCAACAAATCCATCTGTCAATTTTGCTCTTACTaGCTGCTATTCAAGTCTGGGACAGCGATGATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EPNKSICQFCSY*LLFKSGTAMIW Trigger: CCAGATCATCGCTGTCCCAGACTTGAATAGCAGGCAGTAAGAGCAAAATTGACAGATGGATTTGTTGGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | GCTGGATTCGTTTTCTTTAGAGTTCTTCAGCTAAAGTaGCCTGTACTTATGACCTCACCATACACCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: AGFVFFRVLQLK*PVLMTSPYTCT Trigger: GGTGCAGGTGTATGGTGAGGTCATAAGTACAGGGCACTTTAGCTGAAGAACTCTAAAGAAAACGAATCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACTCAGTCAACTCTACTGCTCTCTAGCAAGACACATCCCCCACTCTCAAGATATCCATCTGTCAATTTaGCTCTTACTGCCTGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: LLSQLYCSLARHIPHSQDIHLSI*LLLPAI Trigger: AATAGCAGGCAGTAAGAGCAAAATTGACAGATGGAT...ATCTTGAGAGTGGGGGATGTGTCTTGCTAGAGAGCAGTAGAGTTGACTGAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | TCAAATGGGAATTTGGCTCTTCAGCCTTGTAAGATCTaGGTTCTTCAGGCATGTCCTAGGACTCTGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SNGNLALQPCKI*VLQACPRTLFF Trigger: AAAGAACAGAGTCCTAGGACATGCCTGAAGAACCCAGATCTTACAAGGCTGAAGAGCCAAATTCCCATTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | TCTCTACGCCCAAATGCGTTAGATGATCAACCAAAGTaGTGGTCCAAAACATACTGCAGTTGCTCAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: SLRPNALDDQPK*WSKTYCSCSEL Trigger: AAGTTCTGAGCAACTGCAGTATGTTTTGGACCATCACTTTGGTTGATCATCTAACGCATTTGGGCGTAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR GCA 72 bp | TACAAATGTGAACCCAACAAATCCATCTGTCAATTTTaGTCTTACTGCCTGCTATTCAAGTCTGGGACAGCG | + |
|
Preference number: 3 (lower is better) Translates to: YKCEPNKSICQF*SYCLLFKSGTA Trigger: CGCTGTCCCAGACTTGAATAGCAGGCAGTAAGAGCAAAATTGACAGATGGATTTGTTGGGTTCACATTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTAATCTCCAAATCTTGGGCTCAAATAATACTTTACTCTCATACTTCTGGGAGAAGTGGCCTCCACTaGGGAAGGTATTCATGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RLISKSWAQIILYSHTSGRSGLH*GRYSWL Trigger: AAGCCATGAATACCTTCCCAAGTGGAGGCCACTTCT...CCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATTAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR TCA 72 bp | TACTGCATTGGCAAAGAGTGGTATGTGTCACCCAAATaGCTTATCCTTCCTGTCTATTCTGTTCTCAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YCIGKEWYVSPK*LILPVYSVLKH Trigger: ATGCTTGAGAACAGAATAGACAGGAAGGATAAGTCATTTGGGTGACACATACCACTCTTTGCCAATGCAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | CCAATGCCCAGTCAACATCTAAGCTATTTTAAACACTaGCTTTATACAATAGTCCTGCATACTGCTTCGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PMPSQHLSYFKH*LYTIVLHTASV Trigger: AACCGAAGCAGTATGCAGGACTATTGTATAAAGCCAGTGTTTAAAATAGCTTAGATGTTGACTGGGCATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | GGTCTTGCTATGTTGTTCAGGTTAATCTCCAAATCTTaGGCTCAAATAATACTTTACTCTCATACTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLAMLFRLISKS*AQIILYSHTSG Trigger: CCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATTAACCTGAACAACATAGCAAGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CCA 72 bp | TCTGAGAAATCTATGTCTAGTTTAGCCTTTGGCATCTaGTATAACATGTTTCTTCTTCATAGAGACACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SEKSMSSLAFGI*YNMFLLHRDTA Trigger: TGCAGTGTCTCTATGAAGAAGAAACATGTTATACCAGATGCCAAAGGCTAAACTAGACATAGATTTCTCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CAA 72 bp | ACAGCCACTCCCTCACCTGTGCCTGGCCAAGGCTCGTaGTCTTCAGGGGACTGCTTATGCTGGAGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TATPSPVPGQGS*SSGDCLCWSHS Trigger: AGAGTGGCTCCAGCATAAGCAGTCCCCTGAAGACAACGAGCCTTGGCCAGGCACAGGTGAGGGAGTGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGCCTCTCTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAACCTCCTCAGAGTCAGTaGCACCGGCTGTGGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLSSGLCQELSALPQLQPPQSQ*HRLWPL Trigger: AAGTGGCCACAGCCGGTGTCACTGACTCTGAGGAGG...TTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAGAGAGGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CAA 72 bp | ATACACCTGCACCTGAAAACCCTCCACAGACAGACGTaGACGGCACTGACTGTACGCAATCGGAGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: IHLHLKTLHRQT*TALTVRNRRTC Trigger: GCATGTCCTCCGATTGCGTACAGTCAGTGCCGTCAACGTCTGTCTGTGGAGGGTTTTCAGGTGCAGGTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| 3UTR CAA 72 bp | GATCAATGCATGCGAGCGACATCTGTACCAGAGGCATaGCCAGTGACTGGGTGTTCATGCCTTAGAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DQCMRATSVPEA*PVTGCSCLRVP Trigger: GGGAACTCTAAGGCATGAACACCCAGTCACTGGCAATGCCTCTGGTACAGATGTCGCTCGCATGCATTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAAGATGGTTTCTTCCAGTATGGCCAGCTaGTTTTCCATAGCGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLGCVKSCQLCLSYKMVSSSMAS*FSIAGR Trigger: CCTCCCCGCTATGGAAAAGCAGCTGGCCATACTGGA...AGAAACCATCTTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 72 bp | TTCAGGGGACTGCTTATGCTGGAGCCACTCTTCTTGTaGCTAGGAAGAAGTGGCCTCCACTTGGGAAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: FRGLLMLEPLFL*LGRSGLHLGRY Trigger: ATACCTTCCCAAGTGGAGGCCACTTCTTCCTAGCAACAAGAAGAGTGGCTCCAGCATAAGCAGTCCCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CCA 90 bp | TCTGGCCTCTCTTCTGGGCTGTGTCAAGAGCTGTCAGCTCTGCCTCAGTTACAACTGTGTTTTCTTCACTaGAGATGCTGCAATCCACCT | + |
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Preference number: 4 (lower is better) Translates to: SGLSSGLCQELSALPQLQLCFLH*RCCNPP Trigger: AGGTGGATTGCAGCATCTCCAGTGAAGAAAACACAG...TTGTAACTGAGGCAGAGCTGACAGCTCTTGACACAGCCCAGAAGAGAGGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 72 bp | ATTCATGGCTTCTTCCCTATGCACACTCTAGGCAGCTaGGTCCATTTCTGGGAGACAGGGCATCTTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: IHGFFPMHTLGS*VHFWETGHLVT Trigger: AGTGACAAGATGCCCTGTCTCCCAGAAATGGACCAAGCTGCCTAGAGTGTGCATAGGGAAGAAGCCATGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 72 bp | CCACTCTTCTTGTTGCTAGGAAGAAGTGGCCTCCACTaGGGAAGGTATTCATGGCTTCTTCCCTATGCACAC | + |
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Preference number: 4 (lower is better) Translates to: PLFLLLGRSGLH*GRYSWLLPYAH Trigger: GTGTGCATAGGGAAGAAGCCATGAATACCTTCCCAAGTGGAGGCCACTTCTTCCTAGCAACAAGAAGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCCTTTCCATCAGCAGAGGAAGGGAGAAAGGATCCACTCAGGAAAGTGTATGCAATCCACCTCTGTaGACTTCAAATACAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TALSISRGREKGSTQESVCNPPL*TSNTRN Trigger: GTTCCTTGTATTTGAAGTCCACAGAGGTGGATTGCA...TACACTTTCCTGAGTGGATCCTTTCTCCCTTCCTCTGCTGATGGAAAGGGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR TCA 90 bp | TACAACTGCCCAAATGTTTTCACTACACAGCCCTTTCCATCAGCAGAGGAAGGGATCCCTTTAGAAATTTaGGACCTCTCTTCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: YNCPNVFTTQPFPSAEEGIPLEI*DLSSAT Trigger: TGTGGCTGAAGAGAGGTCTCAAATTTCTAAAGGGAT...CCCTTCCTCTGCTGATGGAAAGGGCTGTGTAGTGAAAACATTTGGGCAGTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 72 bp | GCAGGTTACAAAGGGTCACATGGAAGTAGAACACATTaGTCAACACAGCACTTCATGTGCATGTCACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: AGYKGSHGSRTH*STQHFMCMSQE Trigger: CTCCTGTGACATGCACATGAAGTGCTGTGTTGACAAATGTGTTCTACTTCCATGTGACCCTTTGTAACCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 72 bp | CCTGCCCCACTTTTCATGAAATACAGGAACAACAACTaGGACAGAGAAGCAGACACATCTGCACACAAGATT | + |
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Preference number: 4 (lower is better) Translates to: PAPLFMKYRNNN*DREADTSAHKI Trigger: AATCTTGTGTGCAGATGTGTCTGCTTCTCTGTCCAAGTTGTTGTTCCTGTATTTCATGAAAAGTGGGGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR GCA 90 bp | GATCTAGATCACATTTGGAAGCTACCTGGCTCTTTTGCTGAAGAGTTAATGAAACTTCACTGGAGATGCTaGAATCCACCTCTGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: DLDHIWKLPGSFAEELMKLHWRC*NPPLWT Trigger: AGTCCACAGAGGTGGATTGCAGCATCTCCAGTGAAG...TTTCATTAACTCTTCAGCAAAAGAGCCAGGTAGCTTCCAAATGTGATCTAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CCA 90 bp | ACAACTTGGACAGAGAAGCAGACACATCTGCACACAAGATTTTCACTCAACAAGGGTCGCCTTCTTTTATaGTTAGCGCAGCTACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: TTWTEKQTHLHTRFSLNKGRLLL*LAQLQS Trigger: ACTTTGTAGCTGCGCTAACCATAAAAGAAGGCGACC...CTTGTTGAGTGAAAATCTTGTGTGCAGATGTGTCTGCTTCTCTGTCCAAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR GCA 90 bp | ACAACTTGGACAGAGAAGCAGACACATCTGCACACAAGATTTTCACTCAACAAGGTTGCCGTAATGTTTTaGCATATGCGTTATTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TTWTEKQTHLHTRFSLNKVAVMF*HMRYSV Trigger: CACTGAATAACGCATATGGCAAAACATTACGGCAAC...CTTGTTGAGTGAAAATCTTGTGTGCAGATGTGTCTGCTTCTCTGTCCAAGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CCA 90 bp | TTGGGCTCAAATAATACTTTACTCTCATACTTCTGGGTAGCTGGACTGCAGGTATTATTCAGTGCTGTCTaGATATCCTTTTCTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: LGSNNTLLSYFWVAGLQVLFSAV*ISFSPF Trigger: GAATGGAGAAAAGGATATCCAGACAGCACTGAATAA...TACCTGCAGTCCAGCTACCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 72 bp | TGTTCAATTCAGATAACACATAGGAAATGTACTGCATaGGCAAAGAGTGGTATGTGTCACCCAAATGACTTA | + |
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Preference number: 4 (lower is better) Translates to: CSIQITHRKCTA*AKSGMCHPNDL Trigger: TAAGTCATTTGGGTGACACATACCACTCTTTGCCAATGCAGTACATTTCCTATGTGTTATCTGAATTGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| 3UTR CAA 72 bp | AGGTCTTGCTATGTTGTTCAGGTTAATCTCCAAATCTaGGGCTCAAATAATACTTTACTCTCATACTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSCYVVQVNLQI*GSNNTLLSYFW Trigger: CCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATTAACCTGAACAACATAGCAAGACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CAA 90 bp | TTCACTACACAGCCCTTTCCATCAGCAGAGGAAGGGAGAAAGGATCCACTCAGGACTGTGGGACCAAGTTaGTCTAGGACTGGAACCACT | + |
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Preference number: 5 (lower is better) Translates to: FTTQPFPSAEEGRKDPLRTVGPS*SRTGTT Trigger: AGTGGTTCCAGTCCTAGACAAACTTGGTCCCACAGT...CCTGAGTGGATCCTTTCTCCCTTCCTCTGCTGATGGAAAGGGCTGTGTAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CAA 90 bp | GATCTAGATCACATTTGGAAGCTACCTGGCTCTTTTGCTGAAGAGTTAATGAAATCTGTCAGGCAGGCCTaGGCAGATCCCAGAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: DLDHIWKLPGSFAEELMKSVRQA*ADPRAT Trigger: GGTGGCTCTGGGATCTGCCAAGGCCTGCCTGACAGA...TTTCATTAACTCTTCAGCAAAAGAGCCAGGTAGCTTCCAAATGTGATCTAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTCCTTCAACAAAGGGGCTTACACTCCCTCCAATGCCCAGTCAACATCTAATGGGATGTTTCATCTaGCTGGACTTAAGCACCGCT | + |
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Preference number: 5 (lower is better) Translates to: ASPSTKGLTLPPMPSQHLMGCFI*LDLSTA Trigger: AGCGGTGCTTAAGTCCAGCAAGATGAAACATCCCAT...TAGATGTTGACTGGGCATTGGAGGGAGTGTAAGCCCCTTTGTTGAAGGACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CAA 90 bp | AATGAACGTACCAAAGTCAGACTGCCCAGCAAGGCAGCTCTCCAGTGGGCACTTAATCCCTTTAGAAATTaGAGACCTCTCTTCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: NERTKVRLPSKAALQWALNPFRN*RPLFSH Trigger: GTGGCTGAAGAGAGGTCTCAAATTTCTAAAGGGATT...AAGTGCCCACTGGAGAGCTGCCTTGCTGGGCAGTCTGACTTTGGTACGTTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CAA 90 bp | TTCACTACACAGCCCTTTCCATCAGCAGAGGAAGGGAGAAAGGATCCACTCAGGGGAATAACTTCTTCATaGTCTTCCCAGGGAGATTCT | + |
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Preference number: 5 (lower is better) Translates to: FTTQPFPSAEEGRKDPLRGITSS*SSQGDS Trigger: AGAATCTCCCTGGGAAGACAATGAAGAAGTTATTCC...CCTGAGTGGATCCTTTCTCCCTTCCTCTGCTGATGGAAAGGGCTGTGTAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCCAAAACATACTGCAGTTGCTCAGAACTTCTACATCCAGACAGCTTAGAGTCTTCAGGAAAGTGTaGCAGGTCGATTTTAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: MVQNILQLLRTSTSRQLRVFRKV*QVDFSR Trigger: CCTGCTAAAATCGACCTGCAACACTTTCCTGAAGAC...TCTAAGCTGTCTGGATGTAGAAGTTCTGAGCAACTGCAGTATGTTTTGGACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CAA 90 bp | ACAACTTGGACAGAGAAGCAGACACATCTGCACACAAGATTTTCACTCAACAAGCCCTGGACTGTCACATaGTCATCTGTGTTTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: TTWTEKQTHLHTRFSLNKPWTVT*SSVFSS Trigger: TGAAGAAAACACAGATGACAATGTGACAGTCCAGGG...CTTGTTGAGTGAAAATCTTGTGTGCAGATGTGTCTGCTTCTCTGTCCAAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS CCA 90 bp | AAGTTCAATGTCACTAAAGCTGGTATTCATAGTACTGAAGAAAGTTaGAATAACTTCTTCATTGTCTTCCCAGGGAGATTCTGGCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: KFNVTKAGIHSTEES*NNFFIVFPGRFWRA Trigger: TGCTCGCCAGAATCTCCCTGGGAAGACAATGAAGAAGTTATTCCAACTTTCTTCAGTACTATGAATACCAGCTTTAGTGACATTGAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101385.3 ENSMUST00000119706.8 |
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| CDS-3UTR CAA 90 bp | AGGTTAATCTCCAAATCTTGGGCTCAAATAATACTTTACTCTCATACTTCTGGGATCCACGGAATGAACTaGAATCTCACAGACTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RLISKSWAQIILYSHTSGIHGMN*NLTDCH Trigger: ATGGCAGTCTGTGAGATTCAAGTTCATTCCGTGGAT...CCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATTAACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS-3UTR CAA 90 bp | AGGTTAATCTCCAAATCTTGGGCTCAAATAATACTTTACTCTCATACTTCTGGGTGTTGCCGTAATGTTTaGCCATATGCGTTATTCAGT | + |
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Preference number: 5 (lower is better) Translates to: RLISKSWAQIILYSHTSGCCRNV*PYALFS Trigger: ACTGAATAACGCATATGGCAAAACATTACGGCAACA...CCCAGAAGTATGAGAGTAAAGTATTATTTGAGCCCAAGATTTGGAGATTAACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119706.8 |
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| CDS GCA 72 bp | CTGTCACATTGTCATCTGTGTTTTCTTCACTGGAGATaGTGCAATCCACCTCTGTGGACTTCAAATACAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSHCHLCFLHWR*CNPPLWTSNTR Trigger: CCTTGTATTTGAAGTCCACAGAGGTGGATTGCAGCATCTCCAGTGAAGAAAACACAGATGACAATGTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101385.3 ENSMUST00000119706.8 |
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| CDS GCA 72 bp | TCACATTGTCATCTGTGTTTTCTTCACTGGAGATGCTaGAATCCACCTCTGTGGACTTCAAATACAAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SHCHLCFLHWRC*NPPLWTSNTRN Trigger: GTTCCTTGTATTTGAAGTCCACAGAGGTGGATTGCAGCATCTCCAGTGAAGAAAACACAGATGACAATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101385.3 ENSMUST00000119706.8 |
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| CDS CCA 72 bp | TGTTTTCTTCACTGGAGATGCTGCAATCCACCTCTGTaGACTTCAAATACAAGGAACTCTTGGTTTTCATTA | + |
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Preference number: 6 (lower is better) Translates to: CFLHWRCCNPPL*TSNTRNSWFSL Trigger: TAATGAAAACCAAGAGTTCCTTGTATTTGAAGTCCACAGAGGTGGATTGCAGCATCTCCAGTGAAGAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101385.3 ENSMUST00000119706.8 |
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