RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHA6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041757

Ensembl transcript IDs: ENSMUST00000038295.15, ENSMUST00000105082.9, ENSMUST00000186917.7, ENSMUST00000187285.7, ENSMUST00000187299.2, ENSMUST00000189598.2, ENSMUST00000190186.7, ENSMUST00000212252.2, ENSMUST00000239123.2

Found 890 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGAAGCAGCCCCGGTCCCCAGCCTGGCTCTCTGACGTGTTCCCATaGTGGGTGCAAGGGCAGGAGGCCAGGGTGAGAAGCCAGAGCCCC +
Preference number: 1 (lower is better)
Translates to: MKQPRSPAWLSDVFP*WVQGQEARVRSQSP
Trigger: GGGGCTCTGGCTTCTCACCCTGGCCTCCTGCCCTTGCACCCACCATGGGAACACGTCAGAGAGCCAGGCTGGGGACCGGGGCTGCTTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 90 bp CAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATaGTCAGGGGATGCTACCACGGTGTGGTCCCAACAGAGAGGCTGC +
Preference number: 1 (lower is better)
Translates to: QPGDPSPGEGGRLDR*SGDATTVWSQQRGC
Trigger: GCAGCCTCTCTGTTGGGACCACACCGTGGTAGCATCCCCTGAGCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR TCA 90 bp TCCATGTTCCTTTATGAAGCAGCCCCGGTCCCCAGCCTGGCTCTCTaGCGTGTTCCCATGGTGGGTGCAAGGGCAGGAGGCCAGGGTGAG +
Preference number: 1 (lower is better)
Translates to: SMFLYEAAPVPSLAL*RVPMVGARAGGQGE
Trigger: CTCACCCTGGCCTCCTGCCCTTGCACCCACCATGGGAACACGTCAGAGAGCCAGGCTGGGGACCGGGGCTGCTTCATAAAGGAACATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR TCA 90 bp CAGGAGGGCCACACAATCCATCCAGAACTGCACTTGAGCTCCCCGTaGCAGGGGCATCAGAGAGGACGCCATCCTGGCCTTGCCATGCCC +
Preference number: 1 (lower is better)
Translates to: QEGHTIHPELHLSSP*QGHQRGRHPGLAMP
Trigger: GGGCATGGCAAGGCCAGGATGGCGTCCTCTCTGATGCCCCTGTCACGGGGAGCTCAAGTGCAGTTCTGGATGGATTGTGTGGCCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR TCA 90 bp CTGCAGGATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATaGCTGGGTAATGGGAGGGAAGCCACTGGGGTAGAGGAAGGGACA +
Preference number: 1 (lower is better)
Translates to: LQDAVRANLGTSPLQ*LGNGREATGVEEGT
Trigger: TGTCCCTTCCTCTACCCCAGTGGCTTCCCTCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCATCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 90 bp AAGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTaGTCGGCTAGACAGATGCTCAGGGGATGCTACCACGGTGTGGTC +
Preference number: 1 (lower is better)
Translates to: KFSPTSARRPFSRGG*SARQMLRGCYHGVV
Trigger: GACCACACCGTGGTAGCATCCCCTGAGCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR GCA 90 bp TGTCTGGCTACATTCACGCACGGTAGGTGGGCTAGAGGAAGATTCTaGTCTGCTAGGGTCTCTCCCTGTCCTGTCCTCCCTGGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: CLATFTHGRWARGRF*SARVSPCPVLPGQV
Trigger: CACCTGCCCAGGGAGGACAGGACAGGGAGAGACCCTAGCAGAGCAGAATCTTCCTCTAGCCCACCTACCGTGCGTGAATGTAGCCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 90 bp CCTTGCTCACATCACCTGTCAGAAAGCAAGCTTGCCGAGCTGAGCTaGCACAGCAGAACTCCAGCCCCCAGCCTGTCAAAGCACAGAGGG +
Preference number: 1 (lower is better)
Translates to: PCSHHLSESKLAELS*HSRTPAPSLSKHRG
Trigger: CCCTCTGTGCTTTGACAGGCTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGACAGGTGATGTGAGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 90 bp CCTCTGGGAGCCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTaGCTCAAGCAGGGTAGCTGGCCTCCAGTGAACTCTGGGAAACCC +
Preference number: 1 (lower is better)
Translates to: PLGAQEPLPRTHRLL*LKQGSWPPVNSGKP
Trigger: GGGTTTCCCAGAGTTCACTGGAGGCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGGCTCCCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 90 bp GTGAGAAGCCAGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTaGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCTTGCA +
Preference number: 1 (lower is better)
Translates to: VRSQSPRCAMDAIRR*LCGASQHWPQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCTGGCTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 90 bp TTTGGTGGAGGAGGTAATGTGTTCACTGGGAAGGCCCTGTGTGGGTaGCCAGGACTTTCCCCAGATGGGGTGCTTAGCCCTAGGCCTATG +
Preference number: 1 (lower is better)
Translates to: FGGGGNVFTGKALCG*PGLSPDGVLSPRPM
Trigger: CATAGGCCTAGGGCTAAGCACCCCATCTGGGGAAAGTCCTGGCCACCCACACAGGGCCTTCCCAGTGAACACATTACCTCCTCCACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR TCA 90 bp GGCAAGGGCAGCAGATGTGAACTTGAAGGCATCCATGTTCCTTTATaGAGCAGCCCCGGTCCCCAGCCTGGCTCTCTGACGTGTTCCCAT +
Preference number: 1 (lower is better)
Translates to: GKGSRCELEGIHVPL*SSPGPQPGSLTCSH
Trigger: ATGGGAACACGTCAGAGAGCCAGGCTGGGGACCGGGGCTGCTTCATAAAGGAACATGGATGCCTTCAAGTTCACATCTGCTGCCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 90 bp CCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTaGCCTCCAGTGAACTCTGGGAAACCCATCAGCAGAGCCGTGCCA +
Preference number: 1 (lower is better)
Translates to: PLPRTHRLLWLKQGS*PPVNSGKPISRAVP
Trigger: TGGCACGGCTCTGCTGATGGGTTTCCCAGAGTTCACTGGAGGCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 90 bp TTCGAGGGAATGTCCTTTTCCTGCAGGATGCAGTCCGGGCGAACCTaGGGACCAGCCCTTTACAATGACTGGGTAATGGGAGGGAAGCCA +
Preference number: 1 (lower is better)
Translates to: FEGMSFSCRMQSGRT*GPALYNDWVMGGKP
Trigger: TGGCTTCCCTCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCATCCTGCAGGAAAAGGACATTCCCTCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 90 bp GGCCTATGCCTGGGCCCTGTTCACTCACAGCAAGAGCTTCCAGTCTaGGAAGAGGGCCAACAAATGCCAGAGTTGGAGGTCAGGCTTCAA +
Preference number: 1 (lower is better)
Translates to: GLCLGPVHSQQELPV*EEGQQMPELEVRLQ
Trigger: TTGAAGCCTGACCTCCAACTCTGGCATTTGTTGGCCCTCTTCCCAGACTGGAAGCTCTTGCTGTGAGTGAACAGGGCCCAGGCATAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR GCA 90 bp AGAGCAGGTCTGGTGGCTTGGTGTCTGAAGCTAGCCTTCCTTTGCTaGTGTCTGGCTACATTCACGCACGGTAGGTGGGCTAGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: RAGLVAWCLKLAFLC*CLATFTHGRWARGR
Trigger: TCTTCCTCTAGCCCACCTACCGTGCGTGAATGTAGCCAGACAGCAGCAAAGGAAGGCTAGCTTCAGACACCAAGCCACCAGACCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 90 bp TGTCTTGGGTCTGTCAGGGAGCAGACTGACATCCTTCAAGATGGCTaGCAGCAACCTGTTGGCCTTTTCTCACAGAGGGGTGATGGGAGG +
Preference number: 1 (lower is better)
Translates to: CLGSVREQTDILQDG*QQPVGLFSQRGDGR
Trigger: CCTCCCATCACCCCTCTGTGAGAAAAGGCCAACAGGTTGCTGGCAGCCATCTTGAAGGATGTCAGTCTGCTCCCTGACAGACCCAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 90 bp ACCAAAGAACACAGGGGGTCCCCAACCCACTCTCAGGGATCCACCTaGTGTCTTGGGTCTGTCAGGGAGCAGACTGACATCCTTCAAGAT +
Preference number: 1 (lower is better)
Translates to: TKEHRGSPTHSQGST*CLGSVREQTDILQD
Trigger: ATCTTGAAGGATGTCAGTCTGCTCCCTGACAGACCCAAGACACCAGGTGGATCCCTGAGAGTGGGTTGGGGACCCCCTGTGTTCTTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR GCA 90 bp ATTCTTAGACCAGGACATTCGAGGGAATGTCCTTTTCCTGCAGGATaGAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGG +
Preference number: 1 (lower is better)
Translates to: ILRPGHSRECPFPAG*SPGEPGDQPFTMTG
Trigger: CCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCATCCTGCAGGAAAAGGACATTCCCTCGAATGTCCTGGTCTAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 90 bp CCTGGGCCACTGATGTTCAGGCTGAAGTCTCTGGGCAAAAATGTGTaGAGAGCAGGTCTGGTGGCTTGGTGTCTGAAGCTAGCCTTCCTT +
Preference number: 1 (lower is better)
Translates to: PGPLMFRLKSLGKNV*RAGLVAWCLKLAFL
Trigger: AAGGAAGGCTAGCTTCAGACACCAAGCCACCAGACCTGCTCTCCACACATTTTTGCCCAGAGACTTCAGCCTGAACATCAGTGGCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 90 bp GAGGGTGGTCGGCTAGACAGATGCTCAGGGGATGCTACCACGGTGTaGTCCCAACAGAGAGGCTGCTCATCTAACCTTAACTCTTTGTCT +
Preference number: 1 (lower is better)
Translates to: EGGRLDRCSGDATTV*SQQRGCSSNLNSLS
Trigger: AGACAAAGAGTTAAGGTTAGATGAGCAGCCTCTCTGTTGGGACCACACCGTGGTAGCATCCCCTGAGCATCTGTCTAGCCGACCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 90 bp AGCAAGAGCTTCCAGTCTGGGAAGAGGGCCAACAAATGCCAGAGTTaGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCC +
Preference number: 1 (lower is better)
Translates to: SKSFQSGKRANKCQS*RSGFKSRPEVLSNS
Trigger: GGAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCATTTGTTGGCCCTCTTCCCAGACTGGAAGCTCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR TCA 90 bp GGTTTAAACTGGCTAGGTAAGGCCCCAAGGCTGACAGACTTCATATaGGACCGTCTTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCA +
Preference number: 1 (lower is better)
Translates to: GLNWLGKAPRLTDFI*DRLLSAYDPGRETA
Trigger: TGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAAGACGGTCTCATATGAAGTCTGTCAGCCTTGGGGCCTTACCTAGCCAGTTTAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 90 bp CCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTaGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTCACATCACC +
Preference number: 1 (lower is better)
Translates to: PARSAVKFPNTSLQI*GEVCKLPNLLAHIT
Trigger: GGTGATGTGAGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR TCA 90 bp TTAGAGGGAAATAGGTATGACACAGAGTGGGCTCAGGAGAAACTGTaGGAGGCCCAGGCAGCTCCTAGTATTCACCAAAGAACACAGGGG +
Preference number: 1 (lower is better)
Translates to: LEGNRYDTEWAQEKL*EAQAAPSIHQRTQG
Trigger: CCCCTGTGTTCTTTGGTGAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGTCATACCTATTTCCCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR GCA 90 bp TCTCTAAGCCTCTTTTCTCTTCCATCTTGCTCCTTGCTTCCAACTTaGCCTCAGACACTGTGCAGACCTGCTGTCGTCTCTCTGTCACAC +
Preference number: 1 (lower is better)
Translates to: SLSLFSLPSCSLLPT*PQTLCRPAVVSLSH
Trigger: GTGTGACAGAGAGACGACAGCAGGTCTGCACAGTGTCTGAGGGCAAGTTGGAAGCAAGGAGCAAGATGGAAGAGAAAAGAGGCTTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 90 bp AGATGCTCAGGGGATGCTACCACGGTGTGGTCCCAACAGAGAGGCTaGTCATCTAACCTTAACTCTTTGTCTAAGGTCACTTCCATACTA +
Preference number: 1 (lower is better)
Translates to: RCSGDATTVWSQQRG*SSNLNSLSKVTSIL
Trigger: TAGTATGGAAGTGACCTTAGACAAAGAGTTAAGGTTAGATGAGCAGCCTCTCTGTTGGGACCACACCGTGGTAGCATCCCCTGAGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR GCA 90 bp CCATTTCCCTCCTTCTTTACATCCCTGTTGCTTGTGAAAAGCGTCTaGCTTCTCTTCCTTCACTCTCTAAGCCTCTTTTCTCTTCCATCT +
Preference number: 1 (lower is better)
Translates to: PFPSFFTSLLLVKSV*LLFLHSLSLFSLPS
Trigger: AGATGGAAGAGAAAAGAGGCTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTAAAGAAGGAGGGAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGTGTTCCCATGGTGGGTaGAAGGGCAGGAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LACAWHESSWRLLLPRKTCSHGG*KGRRPG
Trigger: CCCTGGCCTCCTGCCCTTGCACCCACCATGGGAACA...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCTCCACGGGGGATGGTaGAGGAGGGCCACACAATCC +
Preference number: 2 (lower is better)
Translates to: LACAWHESSWRLLLPRKTLHGGW*RRATQS
Trigger: GGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR TCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCGGCATGTGCCTGGCATaGGTCCTCCTGGCGCCTCCT +
Preference number: 2 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFGMCLA*VLLAPP
Trigger: AGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCC...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATGTTCCCATGGTGGGTaGAAGGGCAGGAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQCSHGG*KGRRPG
Trigger: CCCTGGCCTCCTGCCCTTGCACCCACCATGGGAACA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCACGCCATCCTGGCCTTaGCATGCCCGGGTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFTPSWP*HARVLP
Trigger: AGGCAAGACCCGGGCATGGCAAGGCCAGGATGGCGT...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAACACTTGAGCTCCCCGTaGCAGGGGCATCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQHLSSP*QGHQRG
Trigger: TCCTCTCTGATGCCCCTGTCACGGGGAGCTCAAGTG...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCTGTTCCCATGGTGGGTaGAAGGGCAGGAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLCSHGG*KGRRPG
Trigger: CCCTGGCCTCCTGCCCTTGCACCCACCATGGGAACA...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGACGCCATCCTGGCCTTaGCATGCCCGGGTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWTPSWP*HARVLP
Trigger: AGGCAAGACCCGGGCATGGCAAGGCCAGGATGGCGT...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCAGAAGGTGGCTCTGTaGAGCTTCACAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: LACAWHESSWRLLLPRKTQKVAL*SFTALA
Trigger: GGCCAATGCTGTGAAGCTCCACAGAGCCACCTTCTG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGACGTGTTCCCATGGTaGGTGCAAGGGCAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCDVFPW*VQGQEA
Trigger: GGCCTCCTGCCCTTGCACCCACCATGGGAACACGTC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCCTTCCCACCAGCACATaGACTCCACGGGGGATGGTG +
Preference number: 2 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFLPTST*TPRGMV
Trigger: CACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAG...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGGCAGCTGGGACTGAATaGGAGGAAGGTGATGGCAAG +
Preference number: 2 (lower is better)
Translates to: LACAWHESSWRLLLPRKTAAGTE*EEGDGK
Trigger: CTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGC...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTACTGTCCTGTCCTCCCTaGGCAGGTGGGGTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLLSCPP*AGGVEE
Trigger: TTCCTCCACCCCACCTGCCCAGGGAGGACAGGACAG...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGCACTTGAGCTCCCCGTaGCAGGGGCATCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: VRKQACRAELPQQNSSPQHLSSP*QGHQRG
Trigger: TCCTCTCTGATGCCCCTGTCACGGGGAGCTCAAGTG...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTACACTTGAGCTCCCCGTaGCAGGGGCATCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLHLSSP*QGHQRG
Trigger: TCCTCTCTGATGCCCCTGTCACGGGGAGCTCAAGTG...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCACTTGAGCTCCCCGTaGCAGGGGCATCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWHLSSP*QGHQRG
Trigger: TCCTCTCTGATGCCCCTGTCACGGGGAGCTCAAGTG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCTTCCCACCAGCACATaGACTCCACGGGGGATGGTG +
Preference number: 2 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWLPTST*TPRGMV
Trigger: CACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGACTCCACGGGGGATGGTaGAGGAGGGCCACACAATCC +
Preference number: 2 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGLHGGW*RRATQS
Trigger: GGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAG...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCGCCTCCAGTGAACTCTaGGAAACCCATCAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCASSEL*ETHQQS
Trigger: GCTCTGCTGATGGGTTTCCCAGAGTTCACTGGAGGC...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCACTTGAGCTCCCCGTaGCAGGGGCATCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPHLSSP*QGHQRG
Trigger: TCCTCTCTGATGCCCCTGTCACGGGGAGCTCAAGTG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR TCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGTCTTCTCTCTGCCTATaGCCCTGGGAGAGAGACAGC +
Preference number: 2 (lower is better)
Translates to: VRKQACRAELPQQNSSPQSSLCL*PWERDS
Trigger: GCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAAGA...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCTGTTCCCATGGTGGGTaGAAGGGCAGGAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGCSHGG*KGRRPG
Trigger: CCCTGGCCTCCTGCCCTTGCACCCACCATGGGAACA...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTACGCCATCCTGGCCTTaGCATGCCCGGGTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: PRSLSLELIVFFGSSRVATPSWP*HARVLP
Trigger: AGGCAAGACCCGGGCATGGCAAGGCCAGGATGGCGT...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGTGCCCTCAGACACTGTaGAGACCTGCTGTCGTCTCT +
Preference number: 2 (lower is better)
Translates to: VRKQACRAELPQQNSSPQCPQTL*RPAVVS
Trigger: AGAGACGACAGCAGGTCTGCACAGTGTCTGAGGGCA...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCGGGCCATGTGGGGACTaGACGTCTGTACTTGTAAAC +
Preference number: 2 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCGPCGD*TSVLVN
Trigger: GTTTACAAGTACAGACGTGCAGTCCCCACATGGCCC...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCAGAAGGTGGCTCTGTaGAGCTTCACAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLQKVAL*SFTALA
Trigger: GGCCAATGCTGTGAAGCTCCACAGAGCCACCTTCTG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCGACGTGTTCCCATGGTaGGTGCAAGGGCAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFDVFPW*VQGQEA
Trigger: GGCCTCCTGCCCTTGCACCCACCATGGGAACACGTC...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGACGTGTTCCCATGGTaGGTGCAAGGGCAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: PRSLSLELIVFFGSSRVADVFPW*VQGQEA
Trigger: GGCCTCCTGCCCTTGCACCCACCATGGGAACACGTC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGACTTCCCACCAGCACATaGACTCCACGGGGGATGGTG +
Preference number: 2 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGLPTST*TPRGMV
Trigger: CACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAG...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCTTCCCACCAGCACATaGACTCCACGGGGGATGGTG +
Preference number: 2 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPLPTST*TPRGMV
Trigger: CACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCGAGCTGGCATGTGCCTaGCATGAGTCCTCCTGGCGC +
Preference number: 2 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFELACA*HESSWR
Trigger: GCGCCAGGAGGACTCATGCCAGGCACATGCCAGCTC...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGTGAAGGTACAGAGGTaGCAGCCCCTCTGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPVKVQR*QPLCLA
Trigger: TGCCAAGCAGAGGGGCTGTCACCTCTGTACCTTCAC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR TCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCTCCCGAGGAAGACGTaGAGGTACAGAGGTGACAGC +
Preference number: 2 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPLPRKT*RYRGDS
Trigger: GCTGTCACCTCTGTACCTTCACGTCTTCCTCGGGAG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCAGAGCCCCAGGTGTaGAATGGATGCTATCAGAAG +
Preference number: 2 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWPEPQV*NGCYQK
Trigger: CTTCTGATAGCATCCATTGCACACCTGGGGCTCTGG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCTCCACGGGGGATGGTaGAGGAGGGCCACACAATCC +
Preference number: 2 (lower is better)
Translates to: GFQGMESVLSSLLALTHSLHGGW*RRATQS
Trigger: GGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGCAGGAGAGCACACTTaGTGCTTGCAAGCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLAGEHT*CLQACF
Trigger: GAAGCAAGCTTGCAAGCAGCAAGTGTGCTCTCCTGC...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCAGGTGTGCAATGGATaGTATCAGAAGGTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWQVCNG*YQKVAL
Trigger: CAGAGCCACCTTCTGATAGCATCCATTGCACACCTG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGCTAGCCTTCCTTTGCTaGTGTCTGGCTACATTCACG +
Preference number: 2 (lower is better)
Translates to: VRKQACRAELPQQNSSPQLAFLC*CLATFT
Trigger: CGTGAATGTAGCCAGACAGCAGCAAAGGAAGGCTAG...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGATGCTATCAGAAGGTaGCTCTGTGGAGCTTCACAG +
Preference number: 2 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCDAIRR*LCGASQ
Trigger: CTGTGAAGCTCCACAGAGCCACCTTCTGATAGCATC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGATGCTATCAGAAGGTaGCTCTGTGGAGCTTCACAG +
Preference number: 2 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWDAIRR*LCGASQ
Trigger: CTGTGAAGCTCCACAGAGCCACCTTCTGATAGCATC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGCCTCCAGTGAACTCTaGGAAACCCATCAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPASSEL*ETHQQS
Trigger: GCTCTGCTGATGGGTTTCCCAGAGTTCACTGGAGGC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCACCAAGCACCTCAGTTaGAGCTGGCATGTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFTKHLS*SWHVPG
Trigger: GCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGT...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGAGCAGGTCTGGTGGCTTaGTGTCTGAAGCTAGCCTTC +
Preference number: 2 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGAGLVA*CLKLAF
Trigger: GAAGGCTAGCTTCAGACACCAAGCCACCAGACCTGC...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAAGAGGCAAAAACAGGTaGAATCCTCCCGATCCAGAG +
Preference number: 2 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLRGKNR*NPPDPE
Trigger: CTCTGGATCGGGAGGATTCCACCTGTTTTTGCCTCT...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCGCTCAGGAGAAACTGTaGGAGGCCCAGGCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: MPELEVRLQKPARSAVKFAQEKL*EAQAAP
Trigger: AGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGC...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCCTTGTGAAAAGCGTCTaGCTTCTCTTCCTTCACTCT +
Preference number: 2 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCLVKSV*LLFLHS
Trigger: AGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAG...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: GFQGMESVLSSLLALTHSGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: FSLPMTLGERQQALTQIGGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGCCTCCAGTGAACTCTaGGAAACCCATCAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAASSEL*ETHQQS
Trigger: GCTCTGCTGATGGGTTTCCCAGAGTTCACTGGAGGC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAACCAAGCACCTCAGTTaGAGCTGGCATGTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: FSLPMTLGERQQALTQIGTKHLS*SWHVPG
Trigger: GCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGT...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGCTGTCCTGTCCTCCCTaGGCAGGTGGGGTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGLSCPP*AGGVEE
Trigger: TTCCTCCACCCCACCTGCCCAGGGAGGACAGGACAG...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCCTGCCAGCAACCTGTTaGCCTTTTCTCACAGAGGGG +
Preference number: 2 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFLPATC*PFLTEG
Trigger: CCCCTCTGTGAGAAAAGGCCAACAGGTTGCTGGCAG...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGTTTATGAAATGTAGGTaGGAGTGGTGGGGAGGCAAA +
Preference number: 2 (lower is better)
Translates to: VRKQACRAELPQQNSSPQFMKCR*EWWGGK
Trigger: TTTGCCTCCCCACCACTCTCACCTACATTTCATAAA...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTTTTCTCACAGAGGGGTaGTGGGAGGTGGTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAFLTEG*WEVVQG
Trigger: CCCCTGGACCACCTCCCATCACCCCTCTGTGAGAAA...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATGCCCTCAGACACTGTaGAGACCTGCTGTCGTCTCT +
Preference number: 2 (lower is better)
Translates to: FSLPMTLGERQQALTQIGCPQTL*RPAVVS
Trigger: AGAGACGACAGCAGGTCTGCACAGTGTCTGAGGGCA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCTTTTCTCTTCCATCTTaGTCCTTGCTTCCAACTTGC +
Preference number: 2 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCFSLPS*SLLPTC
Trigger: GCAAGTTGGAAGCAAGGAGCAAGATGGAAGAGAAAA...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCCTGACAGACTTCATATaGGACCGTCTTCTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFLTDFI*DRLLSA
Trigger: GGCAGAGAGAAGACGGTCTCATATGAAGTCTGTCAG...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCAGGTGTGCAATGGATaGTATCAGAAGGTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAQVCNG*YQKVAL
Trigger: CAGAGCCACCTTCTGATAGCATCCATTGCACACCTG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGACGCCATCCTGGCCTTaGCATGCCCGGGTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKTPSWP*HARVLP
Trigger: AGGCAAGACCCGGGCATGGCAAGGCCAGGATGGCGT...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCTCCACGGGGGATGGTaGAGGAGGGCCACACAATCC +
Preference number: 2 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKLHGGW*RRATQS
Trigger: GGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGACGTGTTCCCATGGTaGGTGCAAGGGCAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKDVFPW*VQGQEA
Trigger: GGCCTCCTGCCCTTGCACCCACCATGGGAACACGTC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCCTGCCAGCAACCTGTTaGCCTTTTCTCACAGAGGGG +
Preference number: 2 (lower is better)
Translates to: MPELEVRLQKPARSAVKFLPATC*PFLTEG
Trigger: CCCCTCTGTGAGAAAAGGCCAACAGGTTGCTGGCAG...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CAA 90 bp ACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCTCGCTGTGTaGTACGGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTA +
Preference number: 2 (lower is better)
Translates to: TEWEEGDGKTWPLAV*YGFQGMESVLSSLL
Trigger: TAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCCGTACAACACAGCGAGAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACAGGTGTGCAATGGATaGTATCAGAAGGTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: FSLPMTLGERQQALTQIGQVCNG*YQKVAL
Trigger: CAGAGCCACCTTCTGATAGCATCCATTGCACACCTG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATCCTTGCTTCCAACTTaGCCTCAGACACTGTGCAGA +
Preference number: 2 (lower is better)
Translates to: FSLPMTLGERQQALTQIGSLLPT*PQTLCR
Trigger: TCTGCACAGTGTCTGAGGGCAAGTTGGAAGCAAGGA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTGCAGCTGGGACTGAATaGGAGGAAGGTGATGGCAAG +
Preference number: 2 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAAAGTE*EEGDGK
Trigger: CTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGC...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGGCAGCTGGGACTGAATaGGAGGAAGGTGATGGCAAG +
Preference number: 2 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGAAGTE*EEGDGK
Trigger: CTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGC...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CAA 90 bp CTCTCTAAGCCTCTTTTCTCTTCCATCTTGCTCCTTGCTTCCAACTaGCCCTCAGACACTGTGCAGACCTGCTGTCGTCTCTCTGTCACA +
Preference number: 2 (lower is better)
Translates to: LSKPLFSSILLLASN*PSDTVQTCCRLSVT
Trigger: TGTGACAGAGAGACGACAGCAGGTCTGCACAGTGTCTGAGGGCAAGTTGGAAGCAAGGAGCAAGATGGAAGAGAAAAGAGGCTTAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR TCA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGTGGATTGATGGGAGCTaGTGCAGTTGTTTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGWIDGS*CSCFLG
Trigger: GCCCAGGAAACAACTGCATCAGCTCCCATCAATCCA...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATTCCATCTTGCTCCTTaGTTCCAACTTGCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: FSLPMTLGERQQALTQIGFHLAP*FQLALR
Trigger: TCTGAGGGCAAGTTGGAAGCAAGGAGCAAGATGGAA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGTGCCCTCAGACACTGTaGAGACCTGCTGTCGTCTCT +
Preference number: 2 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKCPQTL*RPAVVS
Trigger: AGAGACGACAGCAGGTCTGCACAGTGTCTGAGGGCA...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCTTTTCTCTTCCATCTTaGTCCTTGCTTCCAACTTGC +
Preference number: 2 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFFSLPS*SLLPTC
Trigger: GCAAGTTGGAAGCAAGGAGCAAGATGGAAGAGAAAA...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCAGAAGGTGGCTCTGTaGAGCTTCACAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKQKVAL*SFTALA
Trigger: GGCCAATGCTGTGAAGCTCCACAGAGCCACCTTCTG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGCCTCCAGTGAACTCTaGGAAACCCATCAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKASSEL*ETHQQS
Trigger: GCTCTGCTGATGGGTTTCCCAGAGTTCACTGGAGGC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CCA 90 bp AACTTGCAAGATACAAATCAGAGCTCCCTGGGGTTCTTCCTACCTAATCCAGTAAAGGCCCTGTGTGGGTaGCCAGGACTTTCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: NLQDTNQSSLGFFLPNPVKALCG*PGLSPD
Trigger: ATCTGGGGAAAGTCCTGGCCACCCACACAGGGCCTT...TACTGGATTAGGTAGGAAGAACCCCAGGGAGCTCTGATTTGTATCTTGCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CAA 90 bp GCCTTGCCCCAAGAACATGCCTTTCACAAAGGCAGGAGAGCACACTaGCTGCTTGCAAGCTTGCTTCCTGAGAACAATCCTTTTAAAGTG +
Preference number: 2 (lower is better)
Translates to: ALPQEHAFHKGRRAH*LLASLLPENNPFKV
Trigger: CACTTTAAAAGGATTGTTCTCAGGAAGCAAGCTTGCAAGCAGCAAGTGTGCTCTCCTGCCTTTGTGAAAGGCATGTTCTTGGGGCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGTCCTCCCTGGGCAGGTaGGGTGGAGGAAAGCATCTG +
Preference number: 2 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMSSLGR*GGGKHL
Trigger: CAGATGCTTTCCTCCACCCCACCTGCCCAGGGAGGA...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCAAAGAGCCAGCTTTATaGAATGTAGGTGAGAGTGGT +
Preference number: 2 (lower is better)
Translates to: MPELEVRLQKPARSAVKFKEPAL*NVGESG
Trigger: ACCACTCTCACCTACATTTCATAAAGCTGGCTCTTT...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATTGTTCCCATGGTGGGTaGAAGGGCAGGAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHCSHGG*KGRRPG
Trigger: CCCTGGCCTCCTGCCCTTGCACCCACCATGGGAACA...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGATGCTATCAGAAGGTaGCTCTGTGGAGCTTCACAG +
Preference number: 2 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKDAIRR*LCGASQ
Trigger: CTGTGAAGCTCCACAGAGCCACCTTCTGATAGCATC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGTTCCATCTTGCTCCTTaGTTCCAACTTGCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKFHLAP*FQLALR
Trigger: TCTGAGGGCAAGTTGGAAGCAAGGAGCAAGATGGAA...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR TCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGTGGATTGATGGGAGCTaGTGCAGTTGTTTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMWIDGS*CSCFLG
Trigger: GCCCAGGAAACAACTGCATCAGCTCCCATCAATCCA...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGTTTCCGGGTTTAAACTaGCTAGGTAAGGCCCCAAGG +
Preference number: 2 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMFPGLN*LGKAPR
Trigger: CCTTGGGGCCTTACCTAGCCAGTTTAAACCCGGAAA...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp AACTTGCAAGATACAAATCAGAGCTCCCTGGGGTTCTTCCTACCTAATCCAGTAAACAAATGCCAGAGTTaGAGGTCAGGCTTCAAAAGC +
Preference number: 2 (lower is better)
Translates to: NLQDTNQSSLGFFLPNPVNKCQS*RSGFKS
Trigger: GCTTTTGAAGCCTGACCTCCAACTCTGGCATTTGTT...TACTGGATTAGGTAGGAAGAACCCCAGGGAGCTCTGATTTGTATCTTGCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATCAGGTGTGCAATGGATaGTATCAGAAGGTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHQVCNG*YQKVAL
Trigger: CAGAGCCACCTTCTGATAGCATCCATTGCACACCTG...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR GCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGCTTGTGAAAAGCGTCTaGCTTCTCTTCCTTCACTCT +
Preference number: 2 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMLVKSV*LLFLHS
Trigger: AGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAG...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATGATGCTATCAGAAGGTaGCTCTGTGGAGCTTCACAG +
Preference number: 2 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHDAIRR*LCGASQ
Trigger: CTGTGAAGCTCCACAGAGCCACCTTCTGATAGCATC...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATTTTTGGAAGAGGGTATaGGGAGAGAGGGTAACCTGG +
Preference number: 2 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHFWKRV*GERVTW
Trigger: CCAGGTTACCCTCTCTCCCCATACCCTCTTCCAAAA...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR TCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGATCTTTACTTGCATATaGACCAGTAACTGTCCCGAC +
Preference number: 2 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMIFTCI*TSNCPD
Trigger: GTCGGGACAGTTACTGGTTCATATGCAAGTAAAGAT...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CAA 90 bp AGGTACAAACCACTCATTTTATTTCCGGTATTGGTTTATACAAACTaGCAAGATACAAATCAGAGCTCCCTGGGGTTCTTCCTACCTAAT +
Preference number: 2 (lower is better)
Translates to: RYKPLILFPVLVYTN*QDTNQSSLGFFLPN
Trigger: ATTAGGTAGGAAGAACCCCAGGGAGCTCTGATTTGTATCTTGCAAGTTTGTATAAACCAATACCGGAAATAAAATGAGTGGTTTGTACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp CCCCGGTCCCCAGCCTGGCTCTCTGACGTGTTCCCATaGTGGGTGCAAGGGCAGGAGGCCAGGGTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: PRSPAWLSDVFP*WVQGQEARVRS
Trigger: GCTTCTCACCCTGGCCTCCTGCCCTTGCACCCACCATGGGAACACGTCAGAGAGCCAGGCTGGGGACCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 72 bp CCCTGTGTGGGTGGCCAGGACTTTCCCCAGATGGGGTaGTTAGCCCTAGGCCTATGCCTGGGCCCTGTTCAC +
Preference number: 3 (lower is better)
Translates to: PCVGGQDFPQMG*LALGLCLGPVH
Trigger: GTGAACAGGGCCCAGGCATAGGCCTAGGGCTAAGCACCCCATCTGGGGAAAGTCCTGGCCACCCACACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp TGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTaGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGG +
Preference number: 3 (lower is better)
Translates to: CYQAPQLELACA*HESSWRLLLPR
Trigger: CCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CAA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCCTCTCTGTCACACACTaGACCCCTCTGGGAGCCCAG +
Preference number: 3 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCLSVTH*TPLGAQ
Trigger: CTGGGCTCCCAGAGGGGTCAAGTGTGTGACAGAGAG...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR GCA 72 bp GACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATaGTCAGGGGATGCTACCACGGTGTGGTCCCAACAG +
Preference number: 3 (lower is better)
Translates to: DPSPGEGGRLDR*SGDATTVWSQQ
Trigger: CTGTTGGGACCACACCGTGGTAGCATCCCCTGAGCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp CCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTaGTCGGCTAGACAGATGCTCAGGGGATGCTACCAC +
Preference number: 3 (lower is better)
Translates to: PTSARRPFSRGG*SARQMLRGCYH
Trigger: GTGGTAGCATCCCCTGAGCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR TCA 72 bp GCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATaGCTGGGTAATGGGAGGGAAGCCACTGGGGTAGAG +
Preference number: 3 (lower is better)
Translates to: AVRANLGTSPLQ*LGNGREATGVE
Trigger: CTCTACCCCAGTGGCTTCCCTCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp CACAGGGGGTCCCCAACCCACTCTCAGGGATCCACCTaGTGTCTTGGGTCTGTCAGGGAGCAGACTGACATC +
Preference number: 3 (lower is better)
Translates to: HRGSPTHSQGST*CLGSVREQTDI
Trigger: GATGTCAGTCTGCTCCCTGACAGACCCAAGACACCAGGTGGATCCCTGAGAGTGGGTTGGGGACCCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR TCA 72 bp GCTCACATCACCTGTCAGAAAGCAAGCTTGCCGAGCTaGGCTGCCACAGCAGAACTCCAGCCCCCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: AHITCQKASLPS*AATAELQPPAC
Trigger: ACAGGCTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGACAGGTGATGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCCTTCCATCTTGCTCCTaGCTTCCAACTTGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCLPSCS*LPTCPQ
Trigger: CTGAGGGCAAGTTGGAAGCAAGGAGCAAGATGGAAG...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCGGACAGAAAAACAGGTaGGGGCAGGAGCTGAGGAAA +
Preference number: 3 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFGQKNR*GQELRK
Trigger: TTTCCTCAGCTCCTGCCCCAACCTGTTTTTCTGTCC...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGAGGAAGGGGCAGATTaGGGGTGCTTGAACTATGCA +
Preference number: 3 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLEEGAD*GCLNYA
Trigger: TGCATAGTTCAAGCACCCCAAATCTGCCCCTTCCTC...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGGGACAGAAAAACAGGTaGGGGCAGGAGCTGAGGAAA +
Preference number: 3 (lower is better)
Translates to: VRKQACRAELPQQNSSPQGQKNR*GQELRK
Trigger: TTTCCTCAGCTCCTGCCCCAACCTGTTTTTCTGTCC...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR TCA 72 bp CACACAATCCATCCAGAACTGCACTTGAGCTCCCCGTaGCAGGGGCATCAGAGAGGACGCCATCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: HTIHPELHLSSP*QGHQRGRHPGL
Trigger: AAGGCCAGGATGGCGTCCTCTCTGATGCCCCTGTCACGGGGAGCTCAAGTGCAGTTCTGGATGGATTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 72 bp CCAGGACATTCGAGGGAATGTCCTTTTCCTGCAGGATaGAGTCCGGGCGAACCTGGGGACCAGCCCTTTACA +
Preference number: 3 (lower is better)
Translates to: PGHSRECPFPAG*SPGEPGDQPFT
Trigger: TGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCATCCTGCAGGAAAAGGACATTCCCTCGAATGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR GCA 72 bp ACCTCCTTGCTCACATCACCTGTCAGAAAGCAAGCTTaGCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: TSLLTSPVRKQA*RAELPQQNSSP
Trigger: GGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGACAGGTGATGTGAGCAAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR GCA 72 bp GACTTTCCCCAGATGGGGTGCTTAGCCCTAGGCCTATaGCTGGGCCCTGTTCACTCACAGCAAGAGCTTCCA +
Preference number: 3 (lower is better)
Translates to: DFPQMGCLALGL*LGPVHSQQELP
Trigger: TGGAAGCTCTTGCTGTGAGTGAACAGGGCCCAGGCATAGGCCTAGGGCTAAGCACCCCATCTGGGGAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp CCCCTTACCTCATACCTTGCTACCAAGCACCTCAGTTaGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: PLTSYLATKHLS*SWHVPGMSPPG
Trigger: GCCAGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAGGTATGAGGTAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 72 bp CACAGAGGGGTGATGGGAGGTGGTCCAGGGGCCATGTaGGGACTGCACGTCTGTACTTGTAAACATTCCCTC +
Preference number: 3 (lower is better)
Translates to: HRGVMGGGPGAM*GLHVCTCKHSL
Trigger: GAGGGAATGTTTACAAGTACAGACGTGCAGTCCCCACATGGCCCCTGGACCACCTCCCATCACCCCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR GCA 72 bp CAGGGTGAGAAGCCAGAGCCCCAGGTGTGCAATGGATaGTATCAGAAGGTGGCTCTGTGGAGCTTCACAGCA +
Preference number: 3 (lower is better)
Translates to: QGEKPEPQVCNG*YQKVALWSFTA
Trigger: TGCTGTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCTGGCTTCTCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 72 bp CTGGTGGCTTGGTGTCTGAAGCTAGCCTTCCTTTGCTaGTGTCTGGCTACATTCACGCACGGTAGGTGGGCT +
Preference number: 3 (lower is better)
Translates to: LVAWCLKLAFLC*CLATFTHGRWA
Trigger: AGCCCACCTACCGTGCGTGAATGTAGCCAGACAGCAGCAAAGGAAGGCTAGCTTCAGACACCAAGCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 72 bp GGTCTGGTGGCTTGGTGTCTGAAGCTAGCCTTCCTTTaGTGCTGTCTGGCTACATTCACGCACGGTAGGTGG +
Preference number: 3 (lower is better)
Translates to: GLVAWCLKLAFL*CCLATFTHGRW
Trigger: CCACCTACCGTGCGTGAATGTAGCCAGACAGCAGCAAAGGAAGGCTAGCTTCAGACACCAAGCCACCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 72 bp GGACTGCACGTCTGTACTTGTAAACATTCCCTCAGATaGCCGACCCGCTTCCCTCACGTGCTTGGCATCCCT +
Preference number: 3 (lower is better)
Translates to: GLHVCTCKHSLR*PTRFPHVLGIP
Trigger: AGGGATGCCAAGCACGTGAGGGAAGCGGGTCGGGCATCTGAGGGAATGTTTACAAGTACAGACGTGCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp CAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTaGAGCTTCACAGCATTGGCCTCAGCCAGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: QVCNGCYQKVAL*SFTALASARAC
Trigger: GCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 72 bp CAGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTaGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: QSPRCAMDAIRR*LCGASQHWPQP
Trigger: TGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 72 bp GGGGGCTCTTCCCAGCCAGGAACCAGGCTTCAAGTCTaGATGCCAGACCGATGTGCCATAACTCCAAGGAAA +
Preference number: 3 (lower is better)
Translates to: GGSSQPGTRLQV*MPDRCAITPRK
Trigger: TTTCCTTGGAGTTATGGCACATCGGTCTGGCATCCAGACTTGAAGCCTGGTTCCTGGCTGGGAAGAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp CTGGGCCCTGTTCACTCACAGCAAGAGCTTCCAGTCTaGGAAGAGGGCCAACAAATGCCAGAGTTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: LGPVHSQQELPV*EEGQQMPELEV
Trigger: GACCTCCAACTCTGGCATTTGTTGGCCCTCTTCCCAGACTGGAAGCTCTTGCTGTGAGTGAACAGGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCTTCCATCTTGCTCCTaGCTTCCAACTTGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPLPSCS*LPTCPQ
Trigger: CTGAGGGCAAGTTGGAAGCAAGGAGCAAGATGGAAG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CAA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATACCAAGCACCTCAGTaGGAGCTGGCATGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: FSLPMTLGERQQALTQIGYQAPQ*ELACAW
Trigger: CCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR TCA 72 bp CTTGCCATGCCCGGGTCTTGCCTTAGAACCATAACATaGCAGTGCAGGCTTCAGGGCAAGGGCAGCAGATGT +
Preference number: 3 (lower is better)
Translates to: LAMPGSCLRTIT*QCRLQGKGSRC
Trigger: ACATCTGCTGCCCTTGCCCTGAAGCCTGCACTGTCATGTTATGGTTCTAAGGCAAGACCCGGGCATGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR TCA 72 bp GGGTGGAGGAAAGCATCTGGCCCTGCTCTAGATGCCTaGGATGAGAAGGAAGGACCTAGAACTTGGCCTCAC +
Preference number: 3 (lower is better)
Translates to: GWRKASGPALDA*DEKEGPRTWPH
Trigger: GTGAGGCCAAGTTCTAGGTCCTTCCTTCTCATCTCAGGCATCTAGAGCAGGGCCAGATGCTTTCCTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR GCA 72 bp AACATTCCCTCAGATGCCCGACCCGCTTCCCTCACGTaGTTGGCATCCCTTGGTCTGCTTCCTAAAGTTGAC +
Preference number: 3 (lower is better)
Translates to: NIPSDARPASLT*LASLGLLPKVD
Trigger: GTCAACTTTAGGAAGCAGACCAAGGGATGCCAAGCACGTGAGGGAAGCGGGTCGGGCATCTGAGGGAATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp ATGTCCTTTTCCTGCAGGATGCAGTCCGGGCGAACCTaGGGACCAGCCCTTTACAATGACTGGGTAATGGGA +
Preference number: 3 (lower is better)
Translates to: MSFSCRMQSGRT*GPALYNDWVMG
Trigger: TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCATCCTGCAGGAAAAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp TTCCAGTCTGGGAAGAGGGCCAACAAATGCCAGAGTTaGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTG +
Preference number: 3 (lower is better)
Translates to: FQSGKRANKCQS*RSGFKSRPEVL
Trigger: CAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCATTTGTTGGCCCTCTTCCCAGACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp CGGCTAGACAGATGCTCAGGGGATGCTACCACGGTGTaGTCCCAACAGAGAGGCTGCTCATCTAACCTTAAC +
Preference number: 3 (lower is better)
Translates to: RLDRCSGDATTV*SQQRGCSSNLN
Trigger: GTTAAGGTTAGATGAGCAGCCTCTCTGTTGGGACCACACCGTGGTAGCATCCCCTGAGCATCTGTCTAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR TCA 72 bp TGGCTAGGTAAGGCCCCAAGGCTGACAGACTTCATATaGGACCGTCTTCTCTCTGCCTATGACCCTGGGAGA +
Preference number: 3 (lower is better)
Translates to: WLGKAPRLTDFI*DRLLSAYDPGR
Trigger: TCTCCCAGGGTCATAGGCAGAGAGAAGACGGTCTCATATGAAGTCTGTCAGCCTTGGGGCCTTACCTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CAA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTTACCAAGCACCTCAGTaGGAGCTGGCATGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAYQAPQ*ELACAW
Trigger: CCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTA...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGGAGCTGAGGAAAGGGTaGACATCCAGACAAATATAT +
Preference number: 3 (lower is better)
Translates to: VRKQACRAELPQQNSSPQELRKG*TSRQIY
Trigger: ATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTC...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTGATCCACCTGGTGTCTaGGGTCTGTCAGGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLADPPGV*GLSGSR
Trigger: TCTGCTCCCTGACAGACCCAAGACACCAGGTGGATC...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp AGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTaGCCTCCAGTGAACTCTGGGAAACCCATCAGCAGA +
Preference number: 3 (lower is better)
Translates to: RTHRLLWLKQGS*PPVNSGKPISR
Trigger: TCTGCTGATGGGTTTCCCAGAGTTCACTGGAGGCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CCA 72 bp AGCACTTTCCAGAAGCCAGAGAGAGGCAAAAACAGGTaGAATCCTCCCGATCCAGAGTCCCTCAGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: STFQKPERGKNR*NPPDPESLRSK
Trigger: CTTGCTTCTGAGGGACTCTGGATCGGGAGGATTCCACCTGTTTTTGCCTCTCTCTGGCTTCTGGAAAGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000190186.7
3UTR-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCTCTCTGTCACACACTaGACCCCTCTGGGAGCCCAG +
Preference number: 3 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKLSVTH*TPLGAQ
Trigger: CTGGGCTCCCAGAGGGGTCAAGTGTGTGACAGAGAG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CAA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGTGGGAGCTGATGCAGTaGTTTCCTGGGCCACTGATG +
Preference number: 3 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGWELMQ*FPGPLM
Trigger: CATCAGTGGCCCAGGAAACAACTGCATCAGCTCCCA...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTCTTCCATCTTGCTCCTaGCTTCCAACTTGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLALPSCS*LPTCPQ
Trigger: CTGAGGGCAAGTTGGAAGCAAGGAGCAAGATGGAAG...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCGAAGCTAGCCTTCCTTaGCTGCTGTCTGGCTACATT +
Preference number: 3 (lower is better)
Translates to: MPELEVRLQKPARSAVKFEASLP*LLSGYI
Trigger: AATGTAGCCAGACAGCAGCAAAGGAAGGCTAGCTTC...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp ACCTCAGTCAGCCCACAGTACTTTCCGGGTTTAAACTaGCTAGGTAAGGCCCCAAGGCTGACAGACTTCATA +
Preference number: 3 (lower is better)
Translates to: TSVSPQYFPGLN*LGKAPRLTDFI
Trigger: TATGAAGTCTGTCAGCCTTGGGGCCTTACCTAGCCAGTTTAAACCCGGAAAGTACTGTGGGCTGACTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR-3UTR CAA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGGAAGCTAGCCTTCCTTaGCTGCTGTCTGGCTACATT +
Preference number: 3 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGEASLP*LLSGYI
Trigger: AATGTAGCCAGACAGCAGCAAAGGAAGGCTAGCTTC...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR TCA 72 bp AATAGGTATGACACAGAGTGGGCTCAGGAGAAACTGTaGGAGGCCCAGGCAGCTCCTAGTATTCACCAAAGA +
Preference number: 3 (lower is better)
Translates to: NRYDTEWAQEKL*EAQAAPSIHQR
Trigger: TCTTTGGTGAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGTCATACCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGGGCAAGGGGTGTGGCTaGAATATGCTAAAAATGACG +
Preference number: 3 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGGKGCG*NMLKMT
Trigger: CGTCATTTTTAGCATATTCAAGCCACACCCCTTGCC...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CCA 72 bp AGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTaGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: SAVKFPNTSLQI*GEVCKLPNLLA
Trigger: AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGAGCAGGTCTGGTGGCTaGGTGTCTGAAGCTAGCCTT +
Preference number: 3 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMSRSGG*VSEASL
Trigger: AAGGCTAGCTTCAGACACCAAGCCACCAGACCTGCT...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTGAGCTGAGGAAAGGGTaGACATCCAGACAAATATAT +
Preference number: 3 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAELRKG*TSRQIY
Trigger: ATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTC...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATTACCAAGCACCTCAGTaGGAGCTGGCATGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHYQAPQ*ELACAW
Trigger: CCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTA...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGGTCTGCTTCCTAAAGTaGACAGTAAAGTCAAATTCT +
Preference number: 3 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGVCFLK*TVKSNS
Trigger: AGAATTTGACTTTACTGTCAACTTTAGGAAGCAGAC...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR-3UTR CAA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATCAACAAATGCCAGAGTaGGAGGTCAGGCTTCAAAAG +
Preference number: 3 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHQQMPE*EVRLQK
Trigger: CTTTTGAAGCCTGACCTCCAACTCTGGCATTTGTTG...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGGCTGTCGGCGCCCCGTaGGCGGTCAGACGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTAVGAP*AVRREG
Trigger: CCCCTCTCGTCTGACCGCCCACGGGGCGCCGACAGC...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGACAGCATGCGGCCCCTaGGGGAGGCCTCGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTTACGP*GRPRSP
Trigger: TGGCGACCGAGGCCTCCCGCAGGGGCCGCATGCTGT...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCCTTCTCACAGCCCCTaGCGTCGCCCTCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTPSHSP*RRPPLE
Trigger: CTCGAGGGGAGGGCGACGGCAGGGGCTGTGAGAAGG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGTGGGCTGGAGGGATCTaGACCCGAGCAGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTWAGGI*TRAASP
Trigger: GGGCGAGGCTGCTCGGGTCCAGATCCCTCCAGCCCA...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCTGGGGGTGGCACACTaGACAGACAGCATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTLGVAH*TDSMRP
Trigger: GGGCCGCATGCTGTCTGTGCAGTGTGCCACCCCCAG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGGTGTTCCCCACCTCCTaGAACCCTCGGGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTVFPTS*NPRAIG
Trigger: CCCGATGGCCCGAGGGTTCCAGGAGGTGGGGAACAC...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGTGTAGGAGCCCTGGCTaGGCGAGCGGGGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTCRSPG*ASGAQS
Trigger: ACTCTGTGCCCCGCTCGCCCAGCCAGGGCTCCTACA...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGAGGCAGGCCGGGTGCTaGGCTCAGGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQRQAGC*AQGLGW
Trigger: CCAGCCCAGCCCCTGAGCCCAGCACCCGGCCTGCCT...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGAGGCAGGCCGGGTGCTaGGCTCAGGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWRQAGC*AQGLGW
Trigger: CCAGCCCAGCCCCTGAGCCCAGCACCCGGCCTGCCT...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCAGGCAGGCCGGGTGCTaGGCTCAGGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCRQAGC*AQGLGW
Trigger: CCAGCCCAGCCCCTGAGCCCAGCACCCGGCCTGCCT...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGTGCCGTGGTCGCCTGTaGCAGCTCCACCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTCRGRL*QLHPDV
Trigger: AACATCCGGGTGGAGCTGTCACAGGCGACCACGGCA...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCCCTTCTCACAGCCCCTaGCGTCGCCCTCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCPSHSP*RRPPLE
Trigger: CTCGAGGGGAGGGCGACGGCAGGGGCTGTGAGAAGG...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGGCACTGGGGAGTAGATaGGGGCACGGCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTALGSR*GHGCRS
Trigger: GCTCCTACAGCCGTGCCCGCATCTACTCCCCAGTGC...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCCGCATGGTATGGCTaGTGTCGGCGCCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPAWYG*CRRPVG
Trigger: GCCCACGGGGCGCCGACAGCAGCCATACCATGCGGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATGGGCTGGAGGGATCTaGACCCGAGCAGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQWAGGI*TRAASP
Trigger: GGGCGAGGCTGCTCGGGTCCAGATCCCTCCAGCCCA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGGCTGTCGGGAGGGGCTaGGGATCCAAACGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTAVGRG*GSKRCH
Trigger: ATGGCACCGTTTGGATCCCCAGCCCCTCCCGACAGC...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCGCTCAGGGGCTGGGCTaGCTGGGAGCTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFAQGLG*LGAVGS
Trigger: GGAGCCTACAGCTCCCAGCCAGCCCAGCCCCTGAGC...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAGCTCAGGGGCTGGGCTaGCTGGGAGCTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQAQGLG*LGAVGS
Trigger: GGAGCCTACAGCTCCCAGCCAGCCCAGCCCCTGAGC...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCACAGGCTGAGGCACTaGCTTCTGGGCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTHRLRH*LLGWRD
Trigger: ATCCCTCCAGCCCAGAAGTCAGTGCCTCAGCCTGTG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAGGGGCGCTCTTGCCGTaGGGAGAGGCCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQGALLP*GEAIGE
Trigger: CTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCC...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCATCGGGGTAAGGGCTaGCAGGCTCTGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTHRGKG*QALRLS
Trigger: AGACAGCCTCAGAGCCTGGCAGCCCTTACCCCGATG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCTGCCCGCAGCTGCTaGACCAGCCGCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQSARSC*TSRSCS
Trigger: GGAACAGGAGCGGCTGGTGCAGCAGCTGCGGGCAGA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCCTGGGGGTGGCACACTaGACAGACAGCATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFLGVAH*TDSMRP
Trigger: GGGCCGCATGCTGTCTGTGCAGTGTGCCACCCCCAG...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGCCTCGCCCATGGCCTaGATCCAGGCCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCASPMA*IQASCS
Trigger: GGAGCAGGAGGCCTGGATCCAGGCCATGGGCGAGGC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGGAGCGGGGCACAGAGTaGGACCGGGGCTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQERGTE*DRGCKD
Trigger: GTCCTTGCAGCCCCGGTCCCACTCTGTGCCCCGCTC...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGAGCGGGGCACAGAGTaGGACCGGGGCTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCERGTE*DRGCKD
Trigger: GTCCTTGCAGCCCCGGTCCCACTCTGTGCCCCGCTC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGCTCAGGGGCTGGGCTaGCTGGGAGCTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLAQGLG*LGAVGS
Trigger: GGAGCCTACAGCTCCCAGCCAGCCCAGCCCCTGAGC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGCTCAGGGGCTGGGCTaGCTGGGAGCTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCAQGLG*LGAVGS
Trigger: GGAGCCTACAGCTCCCAGCCAGCCCAGCCCCTGAGC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGCTGTCGGCGCCCCGTaGGCGGTCAGACGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPAVGAP*AVRREG
Trigger: CCCCTCTCGTCTGACCGCCCACGGGGCGCCGACAGC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATGCCGTGGTCGCCTGTaGCAGCTCCACCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQCRGRL*QLHPDV
Trigger: AACATCCGGGTGGAGCTGTCACAGGCGACCACGGCA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGGGGCGCTCTTGCCGTaGGGAGAGGCCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCGALLP*GEAIGE
Trigger: CTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGGGTGTCTCATATGCCTaGCCACCAGGTTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTGVSYA*PPGSSA
Trigger: AGCCGAGGAACCTGGTGGTCAGGCATATGAGACACC...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCAACGCTTATTCCACTaGTTCACCCCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTQRLFH*FTPELA
Trigger: GGCCAGCTCCGGGGTGAAGCAGTGGAATAAGCGTTG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCTGGATCCAGGCCTCCTaGTCCTCGGGGCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCWIQAS*SSGLSA
Trigger: TGCCGAGAGCCCCGAGGAGCAGGAGGCCTGGATCCA...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCTTCTCTGCCCGCAGCTaGTGCACCAGCCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFFSARS*CTSRSC
Trigger: ACAGGAGCGGCTGGTGCAGCAGCTGCGGGCAGAGAA...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGAACAGCATGCGGCCCCTaGGGGAGGCCTCGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGTACGP*GRPRSP
Trigger: TGGCGACCGAGGCCTCCCGCAGGGGCCGCATGCTGT...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCACTGCACAGACAGCATaGGGCCCCTGCGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLTAQTA*GPCGRP
Trigger: AGGCCTCCCGCAGGGGCCGCATGCTGTCTGTGCAGT...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCTGGGGGTGGCACACTaGACAGACAGCATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCLGVAH*TDSMRP
Trigger: GGGCCGCATGCTGTCTGTGCAGTGTGCCACCCCCAG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCGAGTCGCCCGGATGTTaGGCCGCTCTGGAGGAACCT +
Preference number: 4 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFESPGC*AALEEP
Trigger: AGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTC...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGTGTTCCCCACCTCCTaGAACCCTCGGGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLVFPTS*NPRAIG
Trigger: CCCGATGGCCCGAGGGTTCCAGGAGGTGGGGAACAC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGTATCGTAGGCTGGCATaGAGCAGATGCTGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTYRRLA*SRCCRA
Trigger: GGCCCGACAGCATCTGCTCCATGCCAGCCTACGATA...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCTGTAGGAGCCCTGGCTaGGCGAGCGGGGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLCRSPG*ASGAQS
Trigger: ACTCTGTGCCCCGCTCGCCCAGCCAGGGCTCCTACA...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTGTAGGAGCCCTGGCTaGGCGAGCGGGGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWCRSPG*ASGAQS
Trigger: ACTCTGTGCCCCGCTCGCCCAGCCAGGGCTCCTACA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGGTGCAGCAGCTTCTCTaGGTAGGCGGGCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQVQQLL*VGGLAP
Trigger: GGGAGCCAGCCCGCCTACCCAGAGAAGCTGCTGCAC...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGTGCAGCAGCTTCTCTaGGTAGGCGGGCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWVQQLL*VGGLAP
Trigger: GGGAGCCAGCCCGCCTACCCAGAGAAGCTGCTGCAC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGTGCAGCAGCTTCTCTaGGTAGGCGGGCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLVQQLL*VGGLAP
Trigger: GGGAGCCAGCCCGCCTACCCAGAGAAGCTGCTGCAC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGAGGGGTGGCCGAGGTaGGCCAGGTTCCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCEGWPR*ARFLTG
Trigger: TCCAGTGAGGAACCTGGCCCACCTCGGCCACCCCTC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAACGAGAGGGGGTTGACTaGTGGAGTCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQREGVD*WSRGSR
Trigger: CCTGCTTCCCCGACTCCACCAGTCAACCCCCTCTCG...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCGCTGTCGGCGCCCCGTaGGCGGTCAGACGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGAVGAP*AVRREG
Trigger: CCCCTCTCGTCTGACCGCCCACGGGGCGCCGACAGC...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGCTGTCGGCGCCCCGTaGGCGGTCAGACGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHAVGAP*AVRREG
Trigger: CCCCTCTCGTCTGACCGCCCACGGGGCGCCGACAGC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCCCGACTGATGTTGTCTaGAGGCTGCACAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCPTDVV*RLHSRH
Trigger: GTGGCGGCTGTGCAGCCTTCAGACAACATCAGTCGG...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCGGGGCTCTCGGCACTaGAGAAGTAGGTGCGGACTC +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWRGSRH*RSRCGL
Trigger: GAGTCCGCACCTACTTCTTCAGTGCCGAGAGCCCCG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAACACAGGCTGAGGCACTaGCTTCTGGGCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQHRLRH*LLGWRD
Trigger: ATCCCTCCAGCCCAGAAGTCAGTGCCTCAGCCTGTG...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCAGGCTCCAGCTTGGTaGGATTGTTGTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTQAPAW*DCCEVA
Trigger: AGCCACCTCACAACAATCTCACCAAGCTGGAGCCTG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGAGGGCTGCCAGGCTCTaGGGCTGTCTCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWRAARL*GCLRSR
Trigger: TCTGGACCTGAGACAGCCTCAGAGCCTGGCAGCCCT...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCAGGGCTGCCAGGCTCTaGGGCTGTCTCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLRAARL*GCLRSR
Trigger: TCTGGACCTGAGACAGCCTCAGAGCCTGGCAGCCCT...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCCAGAGTCCCCATCATaGGGTGGAAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTPESPS*GGKAVL
Trigger: GAGCACAGCTTTTCCACCTCATGATGGGGACTCTGG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCTGCCGTGGTCGCCTGTaGCAGCTCCACCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLCRGRL*QLHPDV
Trigger: AACATCCGGGTGGAGCTGTCACAGGCGACCACGGCA...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCTGCCGTGGTCGCCTGTaGCAGCTCCACCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCCRGRL*QLHPDV
Trigger: AACATCCGGGTGGAGCTGTCACAGGCGACCACGGCA...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCGGAGCTGTAGGTGGCTaGCGGTCCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFGAVGG*RSKSSS
Trigger: AGAGGAGGACTTGGACCGTCAGCCACCTACAGCTCC...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGAGAGCCAGACACCATTaGAAAGGGGCTCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTRARHH*KGAQGT
Trigger: AGTCCCCTGAGCCCCTTTTCAATGGTGTCTGGCTCT...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGCACTGGGGAGTAGATaGGGGCACGGCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLALGSR*GHGCRS
Trigger: GCTCCTACAGCCGTGCCCGCATCTACTCCCCAGTGC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGTAGGGGAACAGTCCTaGAGGGACTGGCCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCVGEQS*RDWPPV
Trigger: GACAGGCGGCCAGTCCCTGCAGGACTGTTCCCCTAC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTTCTCTGCCCGCAGCTaGTGCACCAGCCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWFSARS*CTSRSC
Trigger: ACAGGAGCGGCTGGTGCAGCAGCTGCGGGCAGAGAA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGTCCCAGAGTTCGTCATaGAGGGCAGAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTSQSSS*RAETSD
Trigger: ATCGGAGGTCTCTGCCCTGCATGACGAACTCTGGGA...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCTACTTCATGGATGCTaGGGTGACGGCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTLLHGC*GDGAPL
Trigger: AAGTGGTGCGCCGTCACCGCAGCATCCATGAAGTAG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCCGTGGTGTCTCATATaGCTGACCACCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTPWCLI*LTTRFL
Trigger: GAGGAACCTGGTGGTCAGGCATATGAGACACCACGG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGTCAATCCGCTTCTCCTaGTCCTGCAGCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTSIRFS*SCSWLS
Trigger: AGAGAGCCAGCTGCAGGAGCAGGAGAAGCGGATTGA...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCACAGCATGCGGCCCCTaGGGGAGGCCTCGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFTACGP*GRPRSP
Trigger: TGGCGACCGAGGCCTCCCGCAGGGGCCGCATGCTGT...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCACAGCATGCGGCCCCTaGGGGAGGCCTCGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGTACGP*GRPRSP
Trigger: TGGCGACCGAGGCCTCCCGCAGGGGCCGCATGCTGT...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCCCGCATGGTATGGCTaGTGTCGGCGCCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAPAWYG*CRRPVG
Trigger: GCCCACGGGGCGCCGACAGCAGCCATACCATGCGGG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGAGTCGCCCGGATGTTaGGCCGCTCTGGAGGAACCT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWESPGC*AALEEP
Trigger: AGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGCCTCCCCTCGAGTCTTaGCCTCAGGCTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQPPLES*PQAPAW
Trigger: CCAAGCTGGAGCCTGAGGCCAAGACTCGAGGGGAGG...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCCTCCCCTCGAGTCTTaGCCTCAGGCTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCPPLES*PQAPAW
Trigger: CCAAGCTGGAGCCTGAGGCCAAGACTCGAGGGGAGG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGCTCCCTGGTCGGCTTaGGGAGCTATACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWAPWSA*GAILPA
Trigger: GGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGAGC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAGTCGGGCCGCACCCCTaGTGGGTAGTACTGGTAATC +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQVGPHP*WVVLVI
Trigger: GATTACCAGTACTACCCACCAGGGGTGCGGCCCGAC...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCATTCCGGAAGGAGTaGCGCTTGTCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPFRKE*RLSSRA
Trigger: GGCCCTGGAGGACAAGCGCCACTCCTTCCGGAATGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCATTCCGGAAGGAGTaGCGCTTGTCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWPFRKE*RLSSRA
Trigger: GGCCCTGGAGGACAAGCGCCACTCCTTCCGGAATGG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGCTGTCGGGAGGGGCTaGGGATCCAAACGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCAVGRG*GSKRCH
Trigger: ATGGCACCGTTTGGATCCCCAGCCCCTCCCGACAGC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCGTCCTCACTGCGTGGTaGCAGCCGATCAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCVLTAW*QPIKTG
Trigger: GCCCGTTTTGATCGGCTGCCACCACGCAGTGAGGAC...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGGATGTCCTCACTGCGTaGTGGCAGCCGATCAAAACG +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTDVLTA*WQPIKT
Trigger: CGTTTTGATCGGCTGCCACCACGCAGTGAGGACATC...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTACAGTCCTGCAGGGACTaGCCGCCTGTCTCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLQSCRD*PPVSQV
Trigger: TACCTGGGAGACAGGCGGCCAGTCCCTGCAGGACTG...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGGCTGGCTGGGCTGTTaGAGCTGTAGGTGGCTGACG +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLGWLGC*SCRWLT
Trigger: CGTCAGCCACCTACAGCTCCAACAGCCCAGCCAGCC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAAGGCAGGCCGGGTGCTaGGCTCAGGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGRQAGC*AQGLGW
Trigger: CCAGCCCAGCCCCTGAGCCCAGCACCCGGCCTGCCT...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCAGGCAGGCCGGGTGCTaGGCTCAGGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSRQAGC*AQGLGW
Trigger: CCAGCCCAGCCCCTGAGCCCAGCACCCGGCCTGCCT...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTGGGAGGGCTGGGGGTaGCACACTGCACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWWEGWG*HTAQTA
Trigger: TGCTGTCTGTGCAGTGTGCCACCCCCAGCCCTCCCA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCGAGAGGGGGTTGACTaGTGGAGTCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWREGVD*WSRGSR
Trigger: CCTGCTTCCCCGACTCCACCAGTCAACCCCCTCTCG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCGAGAGGGGGTTGACTaGTGGAGTCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCREGVD*WSRGSR
Trigger: CCTGCTTCCCCGACTCCACCAGTCAACCCCCTCTCG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCCGACTGATGTTGTCTaGAGGCTGCACAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCPTDVV*RLHSRH
Trigger: GTGGCGGCTGTGCAGCCTTCAGACAACATCAGTCGG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCGGTGTCTCATATGCCTaGCCACCAGGTTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCGVSYA*PPGSSA
Trigger: AGCCGAGGAACCTGGTGGTCAGGCATATGAGACACC...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCTTGGGGCGCTCCCGTaGGGAGAGGCCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPLGALP*GEAIGE
Trigger: CTCACCAATGGCCTCTCCTCACGGGAGCGCCCCAAG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAACAACGCTTATTCCACTaGTTCACCCCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQQRLFH*FTPELA
Trigger: GGCCAGCTCCGGGGTGAAGCAGTGGAATAAGCGTTG...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGAGCTCAGCAGGGGGATaGTGCCCAGGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQSSAGG*CPGCSP
Trigger: AGGAGAGCATCCTGGGCAGCATCCCCCTGCTGAGCT...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTTGGATCCAGGCCTCCTaGTCCTCGGGGCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPWIQAS*SSGLSA
Trigger: TGCCGAGAGCCCCGAGGAGCAGGAGGCCTGGATCCA...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACCCTTCTCACAGCCCCTaGCGTCGCCCTCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHPSHSP*RRPPLE
Trigger: CTCGAGGGGAGGGCGACGGCAGGGGCTGTGAGAAGG...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCCTTCTCACAGCCCCTaGCGTCGCCCTCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAPSHSP*RRPPLE
Trigger: CTCGAGGGGAGGGCGACGGCAGGGGCTGTGAGAAGG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCATCGGGGTAAGGGCTaGCAGGCTCTGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWHRGKG*QALRLS
Trigger: AGACAGCCTCAGAGCCTGGCAGCCCTTACCCCGATG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAGCTTGGCTGTGTCAGTaGCCCGAGAGGGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQAWLCQ*PERGCS
Trigger: AGAACAACCCCTCTCGGGGCACTGACACAGCCAAGC...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTACTCGGCTCTCAGGGCTaGCTCCAGGTTGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLLGSQG*LQVGDV
Trigger: GACATCTCCAACCTGGAGGCAGCCCTGAGAGCCGAG...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCTCGGCTCTCAGGGCTaGCTCCAGGTTGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCLGSQG*LQVGDV
Trigger: GACATCTCCAACCTGGAGGCAGCCCTGAGAGCCGAG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGAACTGCACAGACAGCATaGGGCCCCTGCGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGTAQTA*GPCGRP
Trigger: AGGCCTCCCGCAGGGGCCGCATGCTGTCTGTGCAGT...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCTGGGGGTGGCACACTaGACAGACAGCATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPLGVAH*TDSMRP
Trigger: GGGCCGCATGCTGTCTGTGCAGTGTGCCACCCCCAG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCCCGCATGGTATGGCTaGTGTCGGCGCCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSPAWYG*CRRPVG
Trigger: GCCCACGGGGCGCCGACAGCAGCCATACCATGCGGG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGCCTCGCCCATGGCCTaGATCCAGGCCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAASPMA*IQASCS
Trigger: GGAGCAGGAGGCCTGGATCCAGGCCATGGGCGAGGC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACTGGGCTGGAGGGATCTaGACCCGAGCAGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHWAGGI*TRAASP
Trigger: GGGCGAGGCTGCTCGGGTCCAGATCCCTCCAGCCCA...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGTCGGGCCGCACCCCTaGTGGGTAGTACTGGTAATC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLVGPHP*WVVLVI
Trigger: GATTACCAGTACTACCCACCAGGGGTGCGGCCCGAC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGGTCGGGCCGCACCCCTaGTGGGTAGTACTGGTAATC +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQVGPHP*WVVLVI
Trigger: GATTACCAGTACTACCCACCAGGGGTGCGGCCCGAC...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCTATCGTAGGCTGGCATaGAGCAGATGCTGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCYRRLA*SRCCRA
Trigger: GGCCCGACAGCATCTGCTCCATGCCAGCCTACGATA...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAACTCGTCATAAAAGACTaGCTGTCGGGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQLVIKD*LSGGAG
Trigger: CCCAGCCCCTCCCGACAGCCAGTCTTTTATGACGAG...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCGAGCGGGGCACAGAGTaGGACCGGGGCTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGERGTE*DRGCKD
Trigger: GTCCTTGCAGCCCCGGTCCCACTCTGTGCCCCGCTC...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGAGCGGGGCACAGAGTaGGACCGGGGCTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHERGTE*DRGCKD
Trigger: GTCCTTGCAGCCCCGGTCCCACTCTGTGCCCCGCTC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGTCCTCACTGCGTGGTaGCAGCCGATCAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWVLTAW*QPIKTG
Trigger: GCCCGTTTTGATCGGCTGCCACCACGCAGTGAGGAC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCGGGGGACGTAGGCTTTaGGGAGGGGTGGCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFGGRRL*GGVAEV
Trigger: CACCTCGGCCACCCCTCCCCAAAGCCTACGTCCCCC...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGCTCTCATTGGGGAGTaGAGGGACGGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWALIGE*RDGGRR
Trigger: TCTCCTCCCACCGTCCCTCCACTCCCCAATGAGAGC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAAGAACACAGCACTCTTaGGGCGCTCTTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQRTQHS*GALAVR
Trigger: CCTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCT...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCAGTCCCCCTCGCCGATaGGCACCACGTTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCSPPRR*APRSAY
Trigger: GTATGCAGAACGTGGTGCCCATCGGCGAGGGGGACT...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGTGGCTCTCTGAGTCCTaGGGCACGTCCACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQWLSES*GTSTES
Trigger: GGACTCTGTGGACGTGCCCCAGGACTCAGAGAGCCA...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCTGGCTCTCTGAGTCCTaGGGCACGTCCACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLWLSES*GTSTES
Trigger: GGACTCTGTGGACGTGCCCCAGGACTCAGAGAGCCA...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGACAGACCCGCATGGTATaGCTGCTGTCGGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGQTRMV*LLSAPR
Trigger: ACGGGGCGCCGACAGCAGCCATACCATGCGGGTCTG...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCAGCGTGCTCTGCCTGTaGGGAGAGGCAGTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLSVLCL*GEAVRR
Trigger: TCTACGCACTGCCTCTCCCCACAGGCAGAGCACGCT...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGAGCGTGCTCTGCCTGTaGGGAGAGGCAGTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWSVLCL*GEAVRR
Trigger: TCTACGCACTGCCTCTCCCCACAGGCAGAGCACGCT...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGTCTCATAGCCTGTTTTaGGCTCACTGGACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTSHSLF*AHWTLA
Trigger: AGCCAGGGTCCAGTGAGCCCAAAACAGGCTATGAGA...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CAA 72 bp CTCTGGGAAACCCATCAGCAGAGCCGTGCCAAAGCCTaGGGCATCGCTGAGGCAGCTGGGACTGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LWETHQQSRAKA*GIAEAAGTEWE
Trigger: CTCCCATTCAGTCCCAGCTGCCTCAGCGATGCCCAAGGCTTTGGCACGGCTCTGCTGATGGGTTTCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTAGGGCTGCCAGGCTCTaGGGCTGTCTCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPRAARL*GCLRSR
Trigger: TCTGGACCTGAGACAGCCTCAGAGCCTGGCAGCCCT...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGTGGACCGTGGGGGATaGTGGGTAGTTGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLVDRGG*WVVVGE
Trigger: TTCCCCTACAACTACCCATCATCCCCCACGGTCCAC...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR TCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGTGGACCGTGGGGGATaGTGGGTAGTTGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCVDRGG*WVVVGE
Trigger: TTCCCCTACAACTACCCATCATCCCCCACGGTCCAC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGGGCGCTCTTGCCGTaGGGAGAGGCCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAGALLP*GEAIGE
Trigger: CTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGGTGTCTCATATGCCTaGCCACCAGGTTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCGVSYA*PPGSSA
Trigger: AGCCGAGGAACCTGGTGGTCAGGCATATGAGACACC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGGTGTCTCATATGCCTaGCCACCAGGTTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWGVSYA*PPGSSA
Trigger: AGCCGAGGAACCTGGTGGTCAGGCATATGAGACACC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGGTGTCTCATATGCCTaGCCACCAGGTTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLGVSYA*PPGSSA
Trigger: AGCCGAGGAACCTGGTGGTCAGGCATATGAGACACC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCCGCTTCATGGAGTGTaGGCGTTTACCAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTPLHGV*AFTKGN
Trigger: ATTGCCTTTGGTAAACGCGCACACTCCATGAAGCGG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCATGTTGTCTGAAGGCTaGACAGCCGCCACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCMLSEG*TAATRK
Trigger: CTTCCGGGTGGCGGCTGTGCAGCCTTCAGACAACAT...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGCACTGGGGAGTAGATaGGGGCACGGCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPALGSR*GHGCRS
Trigger: GCTCCTACAGCCGTGCCCGCATCTACTCCCCAGTGC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAGTAGGCAGCGGGATCTaGATAGATGTCCTCACTGCG +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQVGSGI*IDVLTA
Trigger: CGCAGTGAGGACATCTATGCAGATCCCGCTGCCTAC...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCTCTGCCCGCAGCTGCTaGACCAGCCGCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFSARSC*TSRSCS
Trigger: GGAACAGGAGCGGCTGGTGCAGCAGCTGCGGGCAGA...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCTCTGCCCGCAGCTGCTaGACCAGCCGCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGSARSC*TSRSCS
Trigger: GGAACAGGAGCGGCTGGTGCAGCAGCTGCGGGCAGA...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCCAGAGTTCGTCATaGAGGGCAGAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQSQSSS*RAETSD
Trigger: ATCGGAGGTCTCTGCCCTGCATGACGAACTCTGGGA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGCTTGGCTGTGTCAGTaGCCCGAGAGGGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWAWLCQ*PERGCS
Trigger: AGAACAACCCCTCTCGGGGCACTGACACAGCCAAGC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTACTGCACAGACAGCATaGGGCCCCTGCGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVATAQTA*GPCGRP
Trigger: AGGCCTCCCGCAGGGGCCGCATGCTGTCTGTGCAGT...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACCTGGGGGTGGCACACTaGACAGACAGCATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHLGVAH*TDSMRP
Trigger: GGGCCGCATGCTGTCTGTGCAGTGTGCCACCCCCAG...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCGAACACCTCTGGGTATaGAGGGACCTTTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFEHLWV*RDLWGA
Trigger: AGCTCCCCAAAGGTCCCTGCATACCCAGAGGTGTTC...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGAGTCGCCCGGATGTTaGGCCGCTCTGGAGGAACCT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPESPGC*AALEEP
Trigger: AGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGTGTTCCCCACCTCCTaGAACCCTCGGGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAVFPTS*NPRAIG
Trigger: CCCGATGGCCCGAGGGTTCCAGGAGGTGGGGAACAC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTATCGTAGGCTGGCATaGAGCAGATGCTGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWYRRLA*SRCCRA
Trigger: GGCCCGACAGCATCTGCTCCATGCCAGCCTACGATA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCTCCAGGGCCCAGGGTaGACTAATCCTATCGTAGGC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLLQGPG*TNPIVG
Trigger: GCCTACGATAGGATTAGTCCACCCTGGGCCCTGGAG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCCATTCCGGAAGGAGTaGCGCTTGTCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPPFRKE*RLSSRA
Trigger: GGCCCTGGAGGACAAGCGCCACTCCTTCCGGAATGG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCTCGTCATAAAAGACTaGCTGTCGGGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCLVIKD*LSGGAG
Trigger: CCCAGCCCCTCCCGACAGCCAGTCTTTTATGACGAG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCTCGTCATAAAAGACTaGCTGTCGGGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLLVIKD*LSGGAG
Trigger: CCCAGCCCCTCCCGACAGCCAGTCTTTTATGACGAG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGAGGCTGGCTGGGCTGTTaGAGCTGTAGGTGGCTGACG +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGGWLGC*SCRWLT
Trigger: CGTCAGCCACCTACAGCTCCAACAGCCCAGCCAGCC...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCCCTCAGCAGGAGATTTaGTCCGAGGGGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCPQQEI*SEGVQC
Trigger: GCATTGTACCCCCTCGGACCAAATCTCCTGCTGAGG...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAACCTCAGCAGGAGATTTaGTCCGAGGGGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQPQQEI*SEGVQC
Trigger: GCATTGTACCCCCTCGGACCAAATCTCCTGCTGAGG...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGATGGGAGGGCTGGGGGTaGCACACTGCACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGWEGWG*HTAQTA
Trigger: TGCTGTCTGTGCAGTGTGCCACCCCCAGCCCTCCCA...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCAGACCCGCATGGTATaGCTGCTGTCGGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAQTRMV*LLSAPR
Trigger: ACGGGGCGCCGACAGCAGCCATACCATGCGGGTCTG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAATCCCGGAACACCTCTaGGTATGCAGGGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQIPEHL*VCRDLW
Trigger: CCAAAGGTCCCTGCATACCCAGAGGTGTTCCGGGAT...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGGGACCATCTTATCGTaGACCGTGGGGGATGATGGG +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCGTILS*TVGDDG
Trigger: CCCATCATCCCCCACGGTCCACGATAAGATGGTCCC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCCGACTGATGTTGTCTaGAGGCTGCACAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPPTDVV*RLHSRH
Trigger: GTGGCGGCTGTGCAGCCTTCAGACAACATCAGTCGG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGACACAGGCTGAGGCACTaGCTTCTGGGCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGHRLRH*LLGWRD
Trigger: ATCCCTCCAGCCCAGAAGTCAGTGCCTCAGCCTGTG...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACAGGGCTGCCAGGCTCTaGGGCTGTCTCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHRAARL*GCLRSR
Trigger: TCTGGACCTGAGACAGCCTCAGAGCCTGGCAGCCCT...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCCAGAGTCCCCATCATaGGGTGGAAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCPESPS*GGKAVL
Trigger: GAGCACAGCTTTTCCACCTCATGATGGGGACTCTGG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCAGAGTCCCCATCATaGGGTGGAAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPESPS*GGKAVL
Trigger: GAGCACAGCTTTTCCACCTCATGATGGGGACTCTGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGCTTGCTCGTTTAGCTTaGAGGTGTGGAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQLARLA*RCGGHP
Trigger: GGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAG...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCAGAGCCAGACACCATTaGAAAGGGGCTCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLRARHH*KGAQGT
Trigger: AGTCCCCTGAGCCCCTTTTCAATGGTGTCTGGCTCT...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCAGAGCCAGACACCATTaGAAAGGGGCTCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCRARHH*KGAQGT
Trigger: AGTCCCCTGAGCCCCTTTTCAATGGTGTCTGGCTCT...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTAGCTCAGCAGGGGGATaGTGCCCAGGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPSSAGG*CPGCSP
Trigger: AGGAGAGCATCCTGGGCAGCATCCCCCTGCTGAGCT...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTGGATCCAGGCCTCCTaGTCCTCGGGGCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSWIQAS*SSGLSA
Trigger: TGCCGAGAGCCCCGAGGAGCAGGAGGCCTGGATCCA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCTGGCATGGAGCAGATaGTGTCGGGCCGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSLAWSR*CRAAPL
Trigger: CAGGGGTGCGGCCCGACAGCATCTGCTCCATGCCAG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGGGTATGCAGGGACTTaGATGAAAAGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWGYAGT*MKRWAL
Trigger: CAGGGCCCACCTTTTCATGCAAGTCCCTGCATACCC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATCTGCCCGCAGCTGCTaGACCAGCCGCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGSARSC*TSRSCS
Trigger: GGAACAGGAGCGGCTGGTGCAGCAGCTGCGGGCAGA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATTGTTGAGAGCTGCCTaGTTCTCTGCCTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQLLRAA*FSASTS
Trigger: AGAGGTGGAGGCAGAGAAGCAGGCAGCTCTCAACAA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCTACTTCATGGATGCTaGGGTGACGGCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLLLHGC*GDGAPL
Trigger: AAGTGGTGCGCCGTCACCGCAGCATCCATGAAGTAG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCGTGGTGTCTCATATaGCTGACCACCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPWCLI*LTTRFL
Trigger: GAGGAACCTGGTGGTCAGGCATATGAGACACCACGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTCCCGCATGGTATGGCTaGTGTCGGCGCCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAPAWYG*CRRPVG
Trigger: GCCCACGGGGCGCCGACAGCAGCCATACCATGCGGG...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCGTGCGGACTCCAGCGTaGTCTGCCTGTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSVRTPA*SACGER
Trigger: CCTCTCCCCACAGGCAGAGCACGCTGGAGTCCGCAC...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGAACACCTCTGGGTATaGAGGGACCTTTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWEHLWV*RDLWGA
Trigger: AGCTCCCCAAAGGTCCCTGCATACCCAGAGGTGTTC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGAACACCTCTGGGTATaGAGGGACCTTTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLEHLWV*RDLWGA
Trigger: AGCTCCCCAAAGGTCCCTGCATACCCAGAGGTGTTC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACCCTCCCCTCGAGTCTTaGCCTCAGGCTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHPPLES*PQAPAW
Trigger: CCAAGCTGGAGCCTGAGGCCAAGACTCGAGGGGAGG...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCCTCCCCTCGAGTCTTaGCCTCAGGCTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAPPLES*PQAPAW
Trigger: CCAAGCTGGAGCCTGAGGCCAAGACTCGAGGGGAGG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCTATACTGCCAGCCATTaGGCTGAGCAGGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCYTASH*AEQGVP
Trigger: GGGAACACCCTGCTCAGCCCAATGGCTGGCAGTATA...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCGCTCCCTGGTCGGCTTaGGGAGCTATACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGAPWSA*GAILPA
Trigger: GGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGAGC...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGTCCCCATCATGAGGTaGAAAAGCTGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCVPIMR*KSCAPW
Trigger: CCAGGGAGCACAGCTTTTCCACCTCATGATGGGGAC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTACATGAAGCTGGTAAGTaGGTCCACCCCCATTCCGGA +
Preference number: 4 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLHEAGK*VHPHSG
Trigger: TCCGGAATGGGGGTGGACCCACTTACCAGCTTCATG...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACC +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQFSLKV*RPSRNT
Trigger: GGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAGTGCAGCAGCTTCTCTaGGTAGGCGGGCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGVQQLL*VGGLAP
Trigger: GGGAGCCAGCCCGCCTACCCAGAGAAGCTGCTGCAC...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCTGTTGGAGCTGTAGGTaGCTGACGGTCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLCWSCR*LTVQVL
Trigger: GAGGACTTGGACCGTCAGCCACCTACAGCTCCAACA...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTGTTGGAGCTGTAGGTaGCTGACGGTCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWCWSCR*LTVQVL
Trigger: GAGGACTTGGACCGTCAGCCACCTACAGCTCCAACA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGGCTGGCTGGGCTGTTaGAGCTGTAGGTGGCTGACG +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHGWLGC*SCRWLT
Trigger: CGTCAGCCACCTACAGCTCCAACAGCCCAGCCAGCC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCCCAGGGGTGATGTCTaGCTCGGGTCTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCPRGDV*LGSFLL
Trigger: AAGCAAGAAAGACCCGAGCCAGACATCACCCCTGGG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCCAGGGGTGATGTCTaGCTCGGGTCTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPRGDV*LGSFLL
Trigger: AAGCAAGAAAGACCCGAGCCAGACATCACCCCTGGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCTCAGCAGGAGATTTaGTCCGAGGGGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPQQEI*SEGVQC
Trigger: GCATTGTACCCCCTCGGACCAAATCTCCTGCTGAGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCGCTCAGGGGCTGGGCTaGCTGGGAGCTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: MPELEVRLQKPARSAVKFAQGLG*LGAVGS
Trigger: GGAGCCTACAGCTCCCAGCCAGCCCAGCCCCTGAGC...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTAGTCCCCCTCGCCGATaGGCACCACGTTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPSPPRR*APRSAY
Trigger: GTATGCAGAACGTGGTGCCCATCGGCGAGGGGGACT...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTGGGAGGGCTGGGGGTaGCACACTGCACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAWEGWG*HTAQTA
Trigger: TGCTGTCTGTGCAGTGTGCCACCCCCAGCCCTCCCA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACTGGGAGGGCTGGGGGTaGCACACTGCACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHWEGWG*HTAQTA
Trigger: TGCTGTCTGTGCAGTGTGCCACCCCCAGCCCTCCCA...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCGAGAGGGGGTTGACTaGTGGAGTCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAREGVD*WSRGSR
Trigger: CCTGCTTCCCCGACTCCACCAGTCAACCCCCTCTCG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCAGACCCGCATGGTATaGCTGCTGTCGGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSQTRMV*LLSAPR
Trigger: ACGGGGCGCCGACAGCAGCCATACCATGCGGGTCTG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGATCCCGGAACACCTCTaGGTATGCAGGGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWIPEHL*VCRDLW
Trigger: CCAAAGGTCCCTGCATACCCAGAGGTGTTCCGGGAT...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAATCCCGGAACACCTCTaGGTATGCAGGGACCATCTT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQIPEHL*VCRDHL
Trigger: AAGATGGTCCCTGCATACCCAGAGGTGTTCCGGGAT...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCCAAAGTCTCTTTCTTaGCTTCAGGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCPKSLS*LQASQA
Trigger: GGCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCAAAGTCTCTTTCTTaGCTTCAGGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPKSLS*LQASQA
Trigger: GGCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATGCCGTGGTCGCCTGTaGCAGCTCCACCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGCRGRL*QLHPDV
Trigger: AACATCCGGGTGGAGCTGTCACAGGCGACCACGGCA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGGAGCTGTAGGTGGCTaGCGGTCCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHGAVGG*RSKSSS
Trigger: AGAGGAGGACTTGGACCGTCAGCCACCTACAGCTCC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGGATGCTGCCCAGGATaGTCTCCTGCTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWGCCPG*SPASHL
Trigger: AAGATGAGAAGCAGGAGAGCATCCTGGGCAGCATCC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACAGCTCAGCAGGGGGATaGTGCCCAGGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHSSAGG*CPGCSP
Trigger: AGGAGAGCATCCTGGGCAGCATCCCCCTGCTGAGCT...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCAGCTCAGCAGGGGGATaGTGCCCAGGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGSSAGG*CPGCSP
Trigger: AGGAGAGCATCCTGGGCAGCATCCCCCTGCTGAGCT...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCATCGGGGTAAGGGCTaGCAGGCTCTGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGHRGKG*QALRLS
Trigger: AGACAGCCTCAGAGCCTGGCAGCCCTTACCCCGATG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTACATAGATGTCCTCACTaGGTGGTGGCAGCCGATCAA +
Preference number: 4 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLHRCPH*VVAADQ
Trigger: TTGATCGGCTGCCACCACGCAGTGAGGACATCTATG...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTTCTCTGCCCGCAGCTaGTGCACCAGCCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSFSARS*CTSRSC
Trigger: ACAGGAGCGGCTGGTGCAGCAGCTGCGGGCAGAGAA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATTCTCTGCCCGCAGCTaGTGCACCAGCCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGFSARS*CTSRSC
Trigger: ACAGGAGCGGCTGGTGCAGCAGCTGCGGGCAGAGAA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGCTTGGCTGTGTCAGTaGCCCGAGAGGGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPAWLCQ*PERGCS
Trigger: AGAACAACCCCTCTCGGGGCACTGACACAGCCAAGC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTTGTTGAGAGCTGCCTaGTTCTCTGCCTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWLLRAA*FSASTS
Trigger: AGAGGTGGAGGCAGAGAAGCAGGCAGCTCTCAACAA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGAAAAGCTGTGCTCCCTaGTCGGCTTGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQKSCAP*SAWGAI
Trigger: TATAGCTCCCCAAGCCGACCAGGGAGCACAGCTTTT...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGAAAAGCTGTGCTCCCTaGTCGGCTTGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWKSCAP*SAWGAI
Trigger: TATAGCTCCCCAAGCCGACCAGGGAGCACAGCTTTT...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGATAGAGCTTTTGCGCTaGGCAATTTTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LACAWHESSWRLLLPRKTIELLR*AILSGS
Trigger: TGACCCTGACAAAATTGCCCAGCGCAAAAGCTCTAT...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGTCGGGCCGCACCCCTaGTGGGTAGTACTGGTAATC +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHVGPHP*WVVLVI
Trigger: GATTACCAGTACTACCCACCAGGGGTGCGGCCCGAC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGTCGGGCCGCACCCCTaGTGGGTAGTACTGGTAATC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAVGPHP*WVVLVI
Trigger: GATTACCAGTACTACCCACCAGGGGTGCGGCCCGAC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCTCCAGGGCCCAGGGTaGACTAATCCTATCGTAGGC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPLQGPG*TNPIVG
Trigger: GCCTACGATAGGATTAGTCCACCCTGGGCCCTGGAG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCTCGTCATAAAAGACTaGCTGTCGGGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPLVIKD*LSGGAG
Trigger: CCCAGCCCCTCCCGACAGCCAGTCTTTTATGACGAG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCGTCCTCACTGCGTGGTaGCAGCCGATCAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGVLTAW*QPIKTG
Trigger: GCCCGTTTTGATCGGCTGCCACCACGCAGTGAGGAC...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGTCCTCACTGCGTGGTaGCAGCCGATCAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAVLTAW*QPIKTG
Trigger: GCCCGTTTTGATCGGCTGCCACCACGCAGTGAGGAC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCAGTCCTGCAGGGACTaGCCGCCTGTCTCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSQSCRD*PPVSQV
Trigger: TACCTGGGAGACAGGCGGCCAGTCCCTGCAGGACTG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCTTATCGTGGACCGTaGGGGATGATGGGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQSYRGP*GMMGSC
Trigger: ACAACTACCCATCATCCCCCACGGTCCACGATAAGA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTAGAACACAGCACTCTTaGGGCGCTCTTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPRTQHS*GALAVR
Trigger: CCTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCT...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGGGGCTGCCTCCAGGTTaGAGATGTCTACTTCATGGA +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQGLPPG*RCLLHG
Trigger: TCCATGAAGTAGACATCTCCAACCTGGAGGCAGCCC...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGGGCTGCCTCCAGGTTaGAGATGTCTACTTCATGGA +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWGLPPG*RCLLHG
Trigger: TCCATGAAGTAGACATCTCCAACCTGGAGGCAGCCC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGGGCTGCCTCCAGGTTaGAGATGTCTACTTCATGGA +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLGLPPG*RCLLHG
Trigger: TCCATGAAGTAGACATCTCCAACCTGGAGGCAGCCC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCAGTCCCCCTCGCCGATaGGCACCACGTTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFSPPRR*APRSAY
Trigger: GTATGCAGAACGTGGTGCCCATCGGCGAGGGGGACT...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTAGTCCCCCTCGCCGATaGGCACCACGTTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVASPPRR*APRSAY
Trigger: GTATGCAGAACGTGGTGCCCATCGGCGAGGGGGACT...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACTGGCTCTCTGAGTCCTaGGGCACGTCCACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHWLSES*GTSTES
Trigger: GGACTCTGTGGACGTGCCCCAGGACTCAGAGAGCCA...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTGGGAGGGCTGGGGGTaGCACACTGCACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSWEGWG*HTAQTA
Trigger: TGCTGTCTGTGCAGTGTGCCACCCCCAGCCCTCCCA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACGAGAGGGGGTTGACTaGTGGAGTCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGREGVD*WSRGSR
Trigger: CCTGCTTCCCCGACTCCACCAGTCAACCCCCTCTCG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGCTGTCGGCGCCCCGTaGGCGGTCAGACGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKAVGAP*AVRREG
Trigger: CCCCTCTCGTCTGACCGCCCACGGGGCGCCGACAGC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCTCTCATAGCCTGTTTTaGGCTCACTGGACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCSHSLF*AHWTLA
Trigger: AGCCAGGGTCCAGTGAGCCCAAAACAGGCTATGAGA...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CAA 72 bp GGTCCCCAACCCACTCTCAGGGATCCACCTGGTGTCTaGGGTCTGTCAGGGAGCAGACTGACATCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GPQPTLRDPPGV*GLSGSRLTSFK
Trigger: CTTGAAGGATGTCAGTCTGCTCCCTGACAGACCCAAGACACCAGGTGGATCCCTGAGAGTGGGTTGGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCACAGGCTGAGGCACTaGCTTCTGGGCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSHRLRH*LLGWRD
Trigger: ATCCCTCCAGCCCAGAAGTCAGTGCCTCAGCCTGTG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCAGGCTCCAGCTTGGTaGGATTGTTGTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPQAPAW*DCCEVA
Trigger: AGCCACCTCACAACAATCTCACCAAGCTGGAGCCTG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCCAGAGTCCCCATCATaGGGTGGAAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPPESPS*GGKAVL
Trigger: GAGCACAGCTTTTCCACCTCATGATGGGGACTCTGG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCATGCAGGGACTTGCATaGAAAGGTGGGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGMQGLA*KGGPWE
Trigger: CTCCCAGGGCCCACCTTTTCATGCAAGTCCCTGCAT...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR TCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTAGAGCCAGACACCATTaGAAAGGGGCTCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPRARHH*KGAQGT
Trigger: AGTCCCCTGAGCCCCTTTTCAATGGTGTCTGGCTCT...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGCCGCTTCATGGAGTGTaGGCGTTTACCAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: VRKQACRAELPQQNSSPQPLHGV*AFTKGN
Trigger: ATTGCCTTTGGTAAACGCGCACACTCCATGAAGCGG...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCGCTTCATGGAGTGTaGGCGTTTACCAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPLHGV*AFTKGN
Trigger: ATTGCCTTTGGTAAACGCGCACACTCCATGAAGCGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACATGTTGTCTGAAGGCTaGACAGCCGCCACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHMLSEG*TAATRK
Trigger: CTTCCGGGTGGCGGCTGTGCAGCCTTCAGACAACAT...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTATGTTGTCTGAAGGCTaGACAGCCGCCACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAMLSEG*TAATRK
Trigger: CTTCCGGGTGGCGGCTGTGCAGCCTTCAGACAACAT...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCATCGGGGTAAGGGCTaGCAGGCTCTGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSHRGKG*QALRLS
Trigger: AGACAGCCTCAGAGCCTGGCAGCCCTTACCCCGATG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGTAGGCAGCGGGATCTaGATAGATGTCCTCACTGCG +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPVGSGI*IDVLTA
Trigger: CGCAGTGAGGACATCTATGCAGATCCCGCTGCCTAC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCGAACACCTCTGGGTATaGAGGGACTTGCATGAAAAG +
Preference number: 4 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFEHLWV*RDLHEK
Trigger: CTTTTCATGCAAGTCCCTGCATACCCAGAGGTGTTC...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCGCTTGGCTGTGTCAGTaGCCCGAGAGGGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGAWLCQ*PERGCS
Trigger: AGAACAACCCCTCTCGGGGCACTGACACAGCCAAGC...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACTCGGCTCTCAGGGCTaGCTCCAGGTTGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGLGSQG*LQVGDV
Trigger: GACATCTCCAACCTGGAGGCAGCCCTGAGAGCCGAG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCCGTGGTGTCTCATATaGCTGACCACCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPPWCLI*LTTRFL
Trigger: GAGGAACCTGGTGGTCAGGCATATGAGACACCACGG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCCCGCATGGTATGGCTaGTGTCGGCGCCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKPAWYG*CRRPVG
Trigger: GCCCACGGGGCGCCGACAGCAGCCATACCATGCGGG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAGAGATTGTTGTGAGGTaGCTGCTGATGGTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQEIVVR*LLMVFA
Trigger: AGCAAACACCATCAGCAGCCACCTCACAACAATCTC...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCGCTCCCTGGTCGGCTTaGGGAGCTATACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: MPELEVRLQKPARSAVKFAPWSA*GAILPA
Trigger: GGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGAGC...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCTCCAGGGCCCAGGGTaGACTAATCCTATCGTAGGC +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGLQGPG*TNPIVG
Trigger: GCCTACGATAGGATTAGTCCACCCTGGGCCCTGGAG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGATGTCCTCACTGCGTaGTGGCAGCCGATCAAAACG +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPDVLTA*WQPIKT
Trigger: CGTTTTGATCGGCTGCCACCACGCAGTGAGGACATC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCCTCCAGATCTCCTTTTaGATTTGCCGATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCLQISF*ICRLST
Trigger: GGTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAG...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCCCTTCCATCACATCCTaGATCCTCCAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFPSITS*ILQISF
Trigger: AAAGGAGATCTGGAGGATCCAGGATGTGATGGAAGG...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTAGGGGAGTTGGGGTATaGCCAGAAGCGGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPRGVGV*PEAALI
Trigger: AATGAGAGCCGCTTCTGGCCATACCCCAACTCCCCT...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATGGCTCTCTGAGTCCTaGGGCACGTCCACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGWLSES*GTSTES
Trigger: GGACTCTGTGGACGTGCCCCAGGACTCAGAGAGCCA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTAGAACACAGCACTCTTaGGGCGCTCCCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVARTQHS*GAPVRR
Trigger: TCTCCTCACGGGAGCGCCCCAAGAGTGCTGTGTTCT...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187285.7
3UTR CAA 72 bp ACCCCTTACCTCATACCTTGCTACCAAGCACCTCAGTaGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TPYLIPCYQAPQ*ELACAWHESSW
Trigger: CCAGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAGGTATGAGGTAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCGGGTGGGATGTTCTCTaGGTCTGGCTTCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSGWDVL*VWLLEA
Trigger: AGCCTCGAGAAGCCAGACTCAGAGAACATCCCACCC...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAGGGTGGGATGTTCTCTaGGTCTGGCTTCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGGWDVL*VWLLEA
Trigger: AGCCTCGAGAAGCCAGACTCAGAGAACATCCCACCC...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCAGGCTCCAGCTTGGTaGGATTGTTGTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAQAPAW*DCCEVA
Trigger: AGCCACCTCACAACAATCTCACCAAGCTGGAGCCTG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTAGGGCTGCCAGGCTCTaGGGCTGTCTCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLARAARL*GCLRSR
Trigger: TCTGGACCTGAGACAGCCTCAGAGCCTGGCAGCCCT...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCCAGAGTCCCCATCATaGGGTGGAAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAPESPS*GGKAVL
Trigger: GAGCACAGCTTTTCCACCTCATGATGGGGACTCTGG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCTTGCTCGTTTAGCTTaGAGGTGTGGAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGLARLA*RCGGHP
Trigger: GGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGTAGGCAGCGGGATCTaGATAGATGTCCTCACTGCG +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHVGSGI*IDVLTA
Trigger: CGCAGTGAGGACATCTATGCAGATCCCGCTGCCTAC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGTAGGCAGCGGGATCTaGATAGATGTCCTCACTGCG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAVGSGI*IDVLTA
Trigger: CGCAGTGAGGACATCTATGCAGATCCCGCTGCCTAC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGATTGTTGAGAGCTGCCTaGTTCTCTGCCTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGLLRAA*FSASTS
Trigger: AGAGGTGGAGGCAGAGAAGCAGGCAGCTCTCAACAA...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCTACTTCATGGATGCTaGGGTGACGGCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGLLHGC*GDGAPL
Trigger: AAGTGGTGCGCCGTCACCGCAGCATCCATGAAGTAG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGATGGGCACCACGTTCTaGATACTGGATTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWMGTTF*ILDLAM
Trigger: CATTGCCAAATCCAGTATGCAGAACGTGGTGCCCAT...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCATGGGCACCACGTTCTaGATACTGGATTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCMGTTF*ILDLAM
Trigger: CATTGCCAAATCCAGTATGCAGAACGTGGTGCCCAT...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTCAATCCGCTTCTCCTaGTCCTGCAGCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVASIRFS*SCSWLS
Trigger: AGAGAGCCAGCTGCAGGAGCAGGAGAAGCGGATTGA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCTCAATCCGCTTCTCCTaGTCCTGCAGCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGSIRFS*SCSWLS
Trigger: AGAGAGCCAGCTGCAGGAGCAGGAGAAGCGGATTGA...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAGTCACCTTAAACGTGTaGTTCCGACTGATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQVTLNV*FRLMLS
Trigger: AGACAACATCAGTCGGAAGCACACGTTTAAGGTGAC...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS-3UTR CCA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTATCAGACACCATGTTGTaGTTGGCTATGTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLSDTML*LAMSLL
Trigger: CAACAGCGACATAGCCAACCACAACATGGTGTCTGA...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCTCAGACACCATGTTGTaGTTGGCTATGTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLSDTML*LAMSLL
Trigger: CAACAGCGACATAGCCAACCACAACATGGTGTCTGA...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCGATGTTGGGCCGCTCTaGAGGAACCTCAGACACCAT +
Preference number: 4 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFDVGPL*RNLRHH
Trigger: ATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATC...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTGAGTCGCCCGGATGTTaGGCCGCTCTGGAGGAACCT +
Preference number: 4 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAESPGC*AALEEP
Trigger: AGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTC...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGCCTCGCCCATGGCCTaGATCCAGGCCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKASPMA*IQASCS
Trigger: GGAGCAGGAGGCCTGGATCCAGGCCATGGGCGAGGC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGAGATTGTTGTGAGGTaGCTGCTGATGGTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWEIVVR*LLMVFA
Trigger: AGCAAACACCATCAGCAGCCACCTCACAACAATCTC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCAGACGGGAGGCCATTaGCTTTTACCAAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWQTGGH*LLPKSL
Trigger: AAGAGACTTTGGTAAAAGCCAATGGCCTCCCGTCTG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACTATACTGCCAGCCATTaGGCTGAGCAGGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHYTASH*AEQGVP
Trigger: GGGAACACCCTGCTCAGCCCAATGGCTGGCAGTATA...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGTCCCCATCATGAGGTaGAAAAGCTGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAVPIMR*KSCAPW
Trigger: CCAGGGAGCACAGCTTTTCCACCTCATGATGGGGAC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCATAGAGCTTTTGCGCTaGGCAATTTTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCIELLR*AILSGS
Trigger: TGACCCTGACAAAATTGCCCAGCGCAAAAGCTCTAT...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTATCGTAGGCTGGCATaGAGCAGATGCTGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSYRRLA*SRCCRA
Trigger: GGCCCGACAGCATCTGCTCCATGCCAGCCTACGATA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACTCCAGGGCCCAGGGTaGACTAATCCTATCGTAGGC +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGLQGPG*TNPIVG
Trigger: GCCTACGATAGGATTAGTCCACCCTGGGCCCTGGAG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCATGAAGCTGGTAAGTaGGTCCACCCCCATTCCGGA +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAHEAGK*VHPHSG
Trigger: TCCGGAATGGGGGTGGACCCACTTACCAGCTTCATG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACCATGAAGCTGGTAAGTaGGTCCACCCCCATTCCGGA +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHHEAGK*VHPHSG
Trigger: TCCGGAATGGGGGTGGACCCACTTACCAGCTTCATG...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCATGAAGCTGGTAAGTaGGTCCACCCCCATTCCGGA +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGHEAGK*VHPHSG
Trigger: TCCGGAATGGGGGTGGACCCACTTACCAGCTTCATG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGAGCGGGGCACAGAGTaGGACCGGGGCTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKERGTE*DRGCKD
Trigger: GTCCTTGCAGCCCCGGTCCCACTCTGTGCCCCGCTC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGATGTCCTCACTGCGTaGTGGCAGCCGATCAAAACG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVADVLTA*WQPIKT
Trigger: CGTTTTGATCGGCTGCCACCACGCAGTGAGGACATC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGATGTCCTCACTGCGTaGTGGCAGCCGATCAAAACG +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHDVLTA*WQPIKT
Trigger: CGTTTTGATCGGCTGCCACCACGCAGTGAGGACATC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTTTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPFSLKV*RPSRNT
Trigger: GGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAA...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTAACATCTCCAGCTCCTaGTGGGTTCCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPNISSS*WVPIKA
Trigger: TGCCTTGATGGGAACCCACCAGGAGCTGGAGATGTT...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTTCCATCACATCCTaGATCCTCCAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWPSITS*ILQISF
Trigger: AAAGGAGATCTGGAGGATCCAGGATGTGATGGAAGG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTGTTGGAGCTGTAGGTaGCTGACGGTCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVACWSCR*LTVQVL
Trigger: GAGGACTTGGACCGTCAGCCACCTACAGCTCCAACA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACCCCAGGGGTGATGTCTaGCTCGGGTCTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHPRGDV*LGSFLL
Trigger: AAGCAAGAAAGACCCGAGCCAGACATCACCCCTGGG...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCCCAGGGGTGATGTCTaGCTCGGGTCTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGPRGDV*LGSFLL
Trigger: AAGCAAGAAAGACCCGAGCCAGACATCACCCCTGGG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCCCTCAGCAGGAGATTTaGTCCGAGGGGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFPQQEI*SEGVQC
Trigger: GCATTGTACCCCCTCGGACCAAATCTCCTGCTGAGG...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACCCTCAGCAGGAGATTTaGTCCGAGGGGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHPQQEI*SEGVQC
Trigger: GCATTGTACCCCCTCGGACCAAATCTCCTGCTGAGG...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAGATGAGGACTTTGTCTaGAGTAGAGAGCTCCTTACT +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQDEDFV*SRELLT
Trigger: AGTAAGGAGCTCTCTACTCCAGACAAAGTCCTCATC...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CAA 72 bp ATTCCCTCAGATGCCCGACCCGCTTCCCTCACGTGCTaGGCATCCCTTGGTCTGCTTCCTAAAGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: IPSDARPASLTC*ASLGLLPKVDS
Trigger: ACTGTCAACTTTAGGAAGCAGACCAAGGGATGCCAAGCACGTGAGGGAAGCGGGTCGGGCATCTGAGGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CAA 72 bp CTTCCAGTCTGGGAAGAGGGCCAACAAATGCCAGAGTaGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LPVWEEGQQMPE*EVRLQKPARSA
Trigger: AGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCATTTGTTGGCCCTCTTCCCAGACTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACAGGCTCCAGCTTGGTaGGATTGTTGTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGQAPAW*DCCEVA
Trigger: AGCCACCTCACAACAATCTCACCAAGCTGGAGCCTG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCCAAAGTCTCTTTCTTaGCTTCAGGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAPKSLS*LQASQA
Trigger: GGCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCCAAAGTCTCTTTCTTaGCTTCAGGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGPKSLS*LQASQA
Trigger: GGCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCTTTGGATTTGCCGATTaGGCACCTCATTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCFGFAD*APHSGY
Trigger: ATATCCAGAATGAGGTGCTCAATCGGCAAATCCAAA...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTGGAGCTGTAGGTGGCTaGCGGTCCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAGAVGG*RSKSSS
Trigger: AGAGGAGGACTTGGACCGTCAGCCACCTACAGCTCC...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCGCCTTGGTAACAGGTaGATTGGGGTTCCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVARLGNR*IGVPLH
Trigger: ATGAAGCGGAACCCCAATGCACCTGTTACCAAGGCG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCTGGCATGGAGCAGATaGTGTCGGGCCGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKLAWSR*CRAAPL
Trigger: CAGGGGTGCGGCCCGACAGCATCTGCTCCATGCCAG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCATAGATGTCCTCACTaGGTGGTGGCAGCCGATCAA +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAHRCPH*VVAADQ
Trigger: TTGATCGGCTGCCACCACGCAGTGAGGACATCTATG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAGTAGGCAGCGGGATCTaGATAGATGTCCTCACTGCG +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGVGSGI*IDVLTA
Trigger: CGCAGTGAGGACATCTATGCAGATCCCGCTGCCTAC...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATCCCAGAGTTCGTCATaGAGGGCAGAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGSQSSS*RAETSD
Trigger: ATCGGAGGTCTCTGCCCTGCATGACGAACTCTGGGA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTCCCAGAGTTCGTCATaGAGGGCAGAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSSQSSS*RAETSD
Trigger: ATCGGAGGTCTCTGCCCTGCATGACGAACTCTGGGA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAATCTCCTTTTGGATTTaGCGATTGAGCACCTCATTC +
Preference number: 4 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQISFWI*RLSTSF
Trigger: GAATGAGGTGCTCAATCGGCAAATCCAAAAGGAGAT...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTCAATCCGCTTCTCCTaGTCCTGCAGCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSSIRFS*SCSWLS
Trigger: AGAGAGCCAGCTGCAGGAGCAGGAGAAGCGGATTGA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGACTGCACAGACAGCATaGGGCCCCTGCGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKTAQTA*GPCGRP
Trigger: AGGCCTCCCGCAGGGGCCGCATGCTGTCTGTGCAGT...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGTGCGGACTCCAGCGTaGTCTGCCTGTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKVRTPA*SACGER
Trigger: CCTCTCCCCACAGGCAGAGCACGCTGGAGTCCGCAC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGTGTTCCCCACCTCCTaGAACCCTCGGGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKVFPTS*NPRAIG
Trigger: CCCGATGGCCCGAGGGTTCCAGGAGGTGGGGAACAC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCAAAAGCTGTGCTCCCTaGTCGGCTTGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGKSCAP*SAWGAI
Trigger: TATAGCTCCCCAAGCCGACCAGGGAGCACAGCTTTT...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCATAGAGCTTTTGCGCTaGGCAATTTTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLIELLR*AILSGS
Trigger: TGACCCTGACAAAATTGCCCAGCGCAAAAGCTCTAT...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGTGTAGGAGCCCTGGCTaGGCGAGCGGGGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKCRSPG*ASGAQS
Trigger: ACTCTGTGCCCCGCTCGCCCAGCCAGGGCTCCTACA...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACAACATCTCCAGCTCCTaGTGGGTTCCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHNISSS*WVPIKA
Trigger: TGCCTTGATGGGAACCCACCAGGAGCTGGAGATGTT...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTAACATCTCCAGCTCCTaGTGGGTTCCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVANISSS*WVPIKA
Trigger: TGCCTTGATGGGAACCCACCAGGAGCTGGAGATGTT...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCGGATGTTGATAAGTTaGTTCTGCAGAGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLRMLIS*FCRDSF
Trigger: GAAGGAGTCTCTGCAGAACCAACTTATCAACATCCG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGATGAGGACTTTGTCTaGAGTAGAGAGCTCCTTACT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWDEDFV*SRELLT
Trigger: AGTAAGGAGCTCTCTACTCCAGACAAAGTCCTCATC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCAGACCCGCATGGTATaGCTGCTGTCGGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKQTRMV*LLSAPR
Trigger: ACGGGGCGCCGACAGCAGCCATACCATGCGGGTCTG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTCTCATAGCCTGTTTTaGGCTCACTGGACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVASHSLF*AHWTLA
Trigger: AGCCAGGGTCCAGTGAGCCCAAAACAGGCTATGAGA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCGGGGCTCTCGGCACTaGAGAAGTAGGTGCGGACTC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKRGSRH*RSRCGL
Trigger: GAGTCCGCACCTACTTCTTCAGTGCCGAGAGCCCCG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTGGGTGGGATGTTCTCTaGGTCTGGCTTCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAGWDVL*VWLLEA
Trigger: AGCCTCGAGAAGCCAGACTCAGAGAACATCCCACCC...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCTTTGGATTTGCCGATTaGGCACCTCATTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCFGFAD*APHSGY
Trigger: ATATCCAGAATGAGGTGCTCAATCGGCAAATCCAAA...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTTTGGATTTGCCGATTaGGCACCTCATTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWFGFAD*APHSGY
Trigger: ATATCCAGAATGAGGTGCTCAATCGGCAAATCCAAA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTATGTTGTCTGAAGGCTaGACAGCCGCCACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAMLSEG*TAATRK
Trigger: CTTCCGGGTGGCGGCTGTGCAGCCTTCAGACAACAT...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACATAGATGTCCTCACTaGGTGGTGGCAGCCGATCAA +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGHRCPH*VVAADQ
Trigger: TTGATCGGCTGCCACCACGCAGTGAGGACATCTATG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGTAGGGGAACAGTCCTaGAGGGACTGGCCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKVGEQS*RDWPPV
Trigger: GACAGGCGGCCAGTCCCTGCAGGACTGTTCCCCTAC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATTGTTGAGAGCTGCCTaGTTCTCTGCCTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGLLRAA*FSASTS
Trigger: AGAGGTGGAGGCAGAGAAGCAGGCAGCTCTCAACAA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGAATGGGCACCACGTTCTaGATACTGGATTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGMGTTF*ILDLAM
Trigger: CATTGCCAAATCCAGTATGCAGAACGTGGTGCCCAT...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTTCAGACACCATGTTGTaGTTGGCTATGTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPSDTML*LAMSLL
Trigger: CAACAGCGACATAGCCAACCACAACATGGTGTCTGA...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGAGATTGTTGTGAGGTaGCTGCTGATGGTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPEIVVR*LLMVFA
Trigger: AGCAAACACCATCAGCAGCCACCTCACAACAATCTC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCAGACGGGAGGCCATTaGCTTTTACCAAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPQTGGH*LLPKSL
Trigger: AAGAGACTTTGGTAAAAGCCAATGGCCTCCCGTCTG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AACTTGCAAGATACAAATCAGAGCTCCCTGGGGTTCTTCCTACCTAATCCAGTAGTGTTCCCCACCTCCTaGAACCCTCGGGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: NLQDTNQSSLGFFLPNPVVFPTS*NPRAIG
Trigger: CCCGATGGCCCGAGGGTTCCAGGAGGTGGGGAACAC...TACTGGATTAGGTAGGAAGAACCCCAGGGAGCTCTGATTTGTATCTTGCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGCTCCCTGGTCGGCTTaGGGAGCTATACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKAPWSA*GAILPA
Trigger: GGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGAGC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAAAAAGCTGTGCTCCCTaGTCGGCTTGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGKSCAP*SAWGAI
Trigger: TATAGCTCCCCAAGCCGACCAGGGAGCACAGCTTTT...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCGTCCCCATCATGAGGTaGAAAAGCTGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: MPELEVRLQKPARSAVKFVPIMR*KSCAPW
Trigger: CCAGGGAGCACAGCTTTTCCACCTCATGATGGGGAC...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCGATGTCCTCACTGCGTaGTGGCAGCCGATCAAAACG +
Preference number: 4 (lower is better)
Translates to: MPELEVRLQKPARSAVKFDVLTA*WQPIKT
Trigger: CGTTTTGATCGGCTGCCACCACGCAGTGAGGACATC...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACC +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGFSLKV*RPSRNT
Trigger: GGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAAACATCTCCAGCTCCTaGTGGGTTCCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGNISSS*WVPIKA
Trigger: TGCCTTGATGGGAACCCACCAGGAGCTGGAGATGTT...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCAACATCTCCAGCTCCTaGTGGGTTCCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSNISSS*WVPIKA
Trigger: TGCCTTGATGGGAACCCACCAGGAGCTGGAGATGTT...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCTCCAGATCTCCTTTTaGATTTGCCGATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPLQISF*ICRLST
Trigger: GGTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCCTTCCATCACATCCTaGATCCTCCAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPPSITS*ILQISF
Trigger: AAAGGAGATCTGGAGGATCCAGGATGTGATGGAAGG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTAGAACACAGCACTCTTaGGGCGCTCTTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLARTQHS*GALAVR
Trigger: CCTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCT...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CAA 72 bp TCTGGGCAAAAATGTGTGGAGAGCAGGTCTGGTGGCTaGGTGTCTGAAGCTAGCCTTCCTTTGCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SGQKCVESRSGG*VSEASLPLLLS
Trigger: AGACAGCAGCAAAGGAAGGCTAGCTTCAGACACCAAGCCACCAGACCTGCTCTCCACACATTTTTGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAAGTCTCTTTCTTaGCTTCAGGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: MPELEVRLQKPARSAVKFPKSLS*LQASQA
Trigger: GGCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGG...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGGAGCTGTAGGTGGCTaGCGGTCCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKGAVGG*RSKSSS
Trigger: AGAGGAGGACTTGGACCGTCAGCCACCTACAGCTCC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACCGCTTCATGGAGTGTaGGCGTTTACCAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGPLHGV*AFTKGN
Trigger: ATTGCCTTTGGTAAACGCGCACACTCCATGAAGCGG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTATATCCAAGTTGAGCTaGTCCCAGAGTTCGTCATGC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAISKLS*SQSSSC
Trigger: GCATGACGAACTCTGGGAGCAGCTCAACTTGGATAT...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCTCGGCTCTCAGGGCTaGCTCCAGGTTGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKLGSQG*LQVGDV
Trigger: GACATCTCCAACCTGGAGGCAGCCCTGAGAGCCGAG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTCAGACACCATGTTGTaGTTGGCTATGTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVASDTML*LAMSLL
Trigger: CAACAGCGACATAGCCAACCACAACATGGTGTCTGA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGGCCTCGCCCATGGCCTaGATCCAGGCCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMASPMA*IQASCS
Trigger: GGAGCAGGAGGCCTGGATCCAGGCCATGGGCGAGGC...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCAGACGGGAGGCCATTaGCTTTTACCAAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGQTGGH*LLPKSL
Trigger: AAGAGACTTTGGTAAAAGCCAATGGCCTCCCGTCTG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCAAAAGCTGTGCTCCCTaGTCGGCTTGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: MPELEVRLQKPARSAVKFKSCAP*SAWGAI
Trigger: TATAGCTCCCCAAGCCGACCAGGGAGCACAGCTTTT...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTATAGAGCTTTTGCGCTaGGCAATTTTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPIELLR*AILSGS
Trigger: TGACCCTGACAAAATTGCCCAGCGCAAAAGCTCTAT...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AACTTGCAAGATACAAATCAGAGCTCCCTGGGGTTCTTCCTACCTAATCCAGTACCATTCCGGAAGGAGTaGCGCTTGTCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NLQDTNQSSLGFFLPNPVPFRKE*RLSSRA
Trigger: GGCCCTGGAGGACAAGCGCCACTCCTTCCGGAATGG...TACTGGATTAGGTAGGAAGAACCCCAGGGAGCTCTGATTTGTATCTTGCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTCATGAAGCTGGTAAGTaGGTCCACCCCCATTCCGGA +
Preference number: 4 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAHEAGK*VHPHSG
Trigger: TCCGGAATGGGGGTGGACCCACTTACCAGCTTCATG...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGTCCTCACTGCGTGGTaGCAGCCGATCAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKVLTAW*QPIKTG
Trigger: GCCCGTTTTGATCGGCTGCCACCACGCAGTGAGGAC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTCAGGTAATCATACTTTaGGGAGCTGATAGATCGCCT +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPQVIIL*GADRSP
Trigger: AGGCGATCTATCAGCTCCCCAAAGTATGATTACCTG...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCTCATCCATCTTATCGTaGACCGTGGGGGATGATGGG +
Preference number: 4 (lower is better)
Translates to: MPELEVRLQKPARSAVKFSSILS*TVGDDG
Trigger: CCCATCATCCCCCACGGTCCACGATAAGATGGATGA...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR CCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGACTCTCGCTCATCTGCTaGTCCAAATACTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGLSLIC*SKYSRF
Trigger: AAACCTAGAGTATTTGGACCAGCAGATGAGCGAGAG...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR CCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGACGGATGTTGATAAGTTaGTTCTGCAGAGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGRMLIS*FCRDSF
Trigger: GAAGGAGTCTCTGCAGAACCAACTTATCAACATCCG...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp ACACAGAGTGGGCTCAGGAGAAACTGTGAGAGGCCCAGGCAGCTCCTAGTATTCCTCCAGATCTCCTTTTaGATTTGCCGATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: TQSGLRRNCERPRQLLVFLQISF*ICRLST
Trigger: GGTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAG...GAATACTAGGAGCTGCCTGGGCCTCTCACAGTTTCTCCTGAGCCCACTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTCTCCAGATCTCCTTTTaGATTTGCCGATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVALQISF*ICRLST
Trigger: GGTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAG...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCCTTCCATCACATCCTaGATCCTCCAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGPSITS*ILQISF
Trigger: AAAGGAGATCTGGAGGATCCAGGATGTGATGGAAGG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGATTTGGATTTGCCGATTaGGCACCTCATTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGFGFAD*APHSGY
Trigger: ATATCCAGAATGAGGTGCTCAATCGGCAAATCCAAA...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCAACGCTTATTCCACTaGTTCACCCCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKQRLFH*FTPELA
Trigger: GGCCAGCTCCGGGGTGAAGCAGTGGAATAAGCGTTG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTCTGCCTTAAACGTGTaGTTCCGACTGATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVASALNV*FRLMLS
Trigger: AGACAACATCAGTCGGAAGCACACGTTTAAGGCAGA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGTGGATCCAGGCCTCCTaGTCCTCGGGGCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMWIQAS*SSGLSA
Trigger: TGCCGAGAGCCCCGAGGAGCAGGAGGCCTGGATCCA...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGCTGGCATGGAGCAGATaGTGTCGGGCCGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMLAWSR*CRAAPL
Trigger: CAGGGGTGCGGCCCGACAGCATCTGCTCCATGCCAG...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGTCTGCCCGCAGCTGCTaGACCAGCCGCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMSARSC*TSRSCS
Trigger: GGAACAGGAGCGGCTGGTGCAGCAGCTGCGGGCAGA...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAATATCCAAGTTGAGCTaGTCCCAGAGTTCGTCATGC +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGISKLS*SQSSSC
Trigger: GCATGACGAACTCTGGGAGCAGCTCAACTTGGATAT...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCATATCCAAGTTGAGCTaGTCCCAGAGTTCGTCATGC +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSISKLS*SQSSSC
Trigger: GCATGACGAACTCTGGGAGCAGCTCAACTTGGATAT...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTATCTCCTTTTGGATTTaGCGATTGAGCACCTCATTC +
Preference number: 4 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPISFWI*RLSTSF
Trigger: GAATGAGGTGCTCAATCGGCAAATCCAAAAGGAGAT...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCATGGGCACCACGTTCTaGATACTGGATTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSMGTTF*ILDLAM
Trigger: CATTGCCAAATCCAGTATGCAGAACGTGGTGCCCAT...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAGAGATTGTTGTGAGGTaGCTGCTGATGGTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGEIVVR*LLMVFA
Trigger: AGCAAACACCATCAGCAGCCACCTCACAACAATCTC...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACAGACGGGAGGCCATTaGCTTTTACCAAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGQTGGH*LLPKSL
Trigger: AAGAGACTTTGGTAAAAGCCAATGGCCTCCCGTCTG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCTCCAGGGCCCAGGGTaGACTAATCCTATCGTAGGC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKLQGPG*TNPIVG
Trigger: GCCTACGATAGGATTAGTCCACCCTGGGCCCTGGAG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTTTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACC +
Preference number: 4 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAFSLKV*RPSRNT
Trigger: GGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAA...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGTTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACC +
Preference number: 4 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGFSLKV*RPSRNT
Trigger: GGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAA...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGGTGCAGCAGCTTCTCTaGGTAGGCGGGCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMVQQLL*VGGLAP
Trigger: GGGAGCCAGCCCGCCTACCCAGAGAAGCTGCTGCAC...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCTCCAGATCTCCTTTTaGATTTGCCGATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSLQISF*ICRLST
Trigger: GGTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGATGAGGACTTTGTCTaGAGTAGAGAGCTCCTTACT +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVADEDFV*SRELLT
Trigger: AGTAAGGAGCTCTCTACTCCAGACAAAGTCCTCATC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGATGAGGACTTTGTCTaGAGTAGAGAGCTCCTTACT +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHDEDFV*SRELLT
Trigger: AGTAAGGAGCTCTCTACTCCAGACAAAGTCCTCATC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCGATGAGGACTTTGTCTaGAGTAGAGAGCTCCTTACT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGDEDFV*SRELLT
Trigger: AGTAAGGAGCTCTCTACTCCAGACAAAGTCCTCATC...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGCAGACCCGCATGGTATaGCTGCTGTCGGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMQTRMV*LLSAPR
Trigger: ACGGGGCGCCGACAGCAGCCATACCATGCGGGTCTG...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CAA 72 bp ATGCCCGACCCGCTTCCCTCACGTGCTTGGCATCCCTaGGTCTGCTTCCTAAAGTTGACAGTAAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: MPDPLPSRAWHP*VCFLKLTVKSN
Trigger: ATTTGACTTTACTGTCAACTTTAGGAAGCAGACCAAGGGATGCCAAGCACGTGAGGGAAGCGGGTCGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCAGGCTCCAGCTTGGTaGGATTGTTGTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKQAPAW*DCCEVA
Trigger: AGCCACCTCACAACAATCTCACCAAGCTGGAGCCTG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCTTGCTCGTTTAGCTTaGAGGTGTGGAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKLARLA*RCGGHP
Trigger: GGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR TCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCTTTGGATTTGCCGATTaGGCACCTCATTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGFGFAD*APHSGY
Trigger: ATATCCAGAATGAGGTGCTCAATCGGCAAATCCAAA...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTCTGCCTTAAACGTGTaGTTCCGACTGATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSSALNV*FRLMLS
Trigger: AGACAACATCAGTCGGAAGCACACGTTTAAGGCAGA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000187285.7
CDS-3UTR GCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATCCTTCTCACAGCCCCTaGCGTCGCCCTCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHPSHSP*RRPPLE
Trigger: CTCGAGGGGAGGGCGACGGCAGGGGCTGTGAGAAGG...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACTTGATAAGTTGGTTCTaGAGAGACTCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHLISWF*RDSFLC
Trigger: GCACAAGAAGGAGTCTCTGCAGAACCAACTTATCAA...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCTTGATAAGTTGGTTCTaGAGAGACTCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGLISWF*RDSFLC
Trigger: GCACAAGAAGGAGTCTCTGCAGAACCAACTTATCAA...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTTGATAAGTTGGTTCTaGAGAGACTCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PRSLSLELIVFFGSSRVALISWF*RDSFLC
Trigger: GCACAAGAAGGAGTCTCTGCAGAACCAACTTATCAA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACATCTCCTTTTGGATTTaGCGATTGAGCACCTCATTC +
Preference number: 4 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHISFWI*RLSTSF
Trigger: GAATGAGGTGCTCAATCGGCAAATCCAAAAGGAGAT...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCATCTCCTTTTGGATTTaGCGATTGAGCACCTCATTC +
Preference number: 4 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGISFWI*RLSTSF
Trigger: GAATGAGGTGCTCAATCGGCAAATCCAAAAGGAGAT...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCCGTGGTGTCTCATATaGCTGACCACCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKPWCLI*LTTRFL
Trigger: GAGGAACCTGGTGGTCAGGCATATGAGACACCACGG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGTATACTGCCAGCCATTaGGCTGAGCAGGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKYTASH*AEQGVP
Trigger: GGGAACACCCTGCTCAGCCCAATGGCTGGCAGTATA...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGTCCCCATCATGAGGTaGAAAAGCTGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKVPIMR*KSCAPW
Trigger: CCAGGGAGCACAGCTTTTCCACCTCATGATGGGGAC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCAGGTAATCATACTTTaGGGAGCTGATAGATCGCCT +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSQVIIL*GADRSP
Trigger: AGGCGATCTATCAGCTCCCCAAAGTATGATTACCTG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACGGATGTTGATAAGTTaGTTCTGCAGAGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: FSLPMTLGERQQALTQIGRMLIS*FCRDSF
Trigger: GAAGGAGTCTCTGCAGAACCAACTTATCAACATCCG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGTGTTGGAGCTGTAGGTaGCTGACGGTCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKCWSCR*LTVQVL
Trigger: GAGGACTTGGACCGTCAGCCACCTACAGCTCCAACA...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGGGCTGGCTGGGCTGTTaGAGCTGTAGGTGGCTGACG +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMGWLGC*SCRWLT
Trigger: CGTCAGCCACCTACAGCTCCAACAGCCCAGCCAGCC...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGATCCCGGAACACCTCTaGGTATGCAGGGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKIPEHL*VCRDLW
Trigger: CCAAAGGTCCCTGCATACCCAGAGGTGTTCCGGGAT...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR TCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATGGGGCGCTCTTGCCGTaGGGAGAGGCCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHGALLP*GEAIGE
Trigger: CTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCC...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCATAGATGTCCTCACTaGGTGGTGGCAGCCGATCAA +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKHRCPH*VVAADQ
Trigger: TTGATCGGCTGCCACCACGCAGTGAGGACATCTATG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTTGATAAGTTGGTTCTaGAGAGACTCCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GFQGMESVLSSLLALTHSLISWF*RDSFLC
Trigger: GCACAAGAAGGAGTCTCTGCAGAACCAACTTATCAA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGTTGTTGAGAGCTGCCTaGTTCTCTGCCTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKLLRAA*FSASTS
Trigger: AGAGGTGGAGGCAGAGAAGCAGGCAGCTCTCAACAA...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATACTGCACAGACAGCATaGGGCCCCTGCGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHTAQTA*GPCGRP
Trigger: AGGCCTCCCGCAGGGGCCGCATGCTGTCTGTGCAGT...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGGGCTGCCTCCAGGTTaGAGATGTCTACTTCATGGA +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKGLPPG*RCLLHG
Trigger: TCCATGAAGTAGACATCTCCAACCTGGAGGCAGCCC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
3UTR CAA 72 bp CAAGAACATGCCTTTCACAAAGGCAGGAGAGCACACTaGCTGCTTGCAAGCTTGCTTCCTGAGAACAATCCT +
Preference number: 4 (lower is better)
Translates to: QEHAFHKGRRAH*LLASLLPENNP
Trigger: AGGATTGTTCTCAGGAAGCAAGCTTGCAAGCAGCAAGTGTGCTCTCCTGCCTTTGTGAAAGGCATGTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATGGAGTGGAGGGACGGTaGGAGGAGATTCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHGVEGR*EEIPGG
Trigger: TCCCCCTGGAATCTCCTCCCACCGTCCCTCCACTCC...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGATATCCAAGTTGAGCTaGTCCCAGAGTTCGTCATGC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKISKLS*SQSSSC
Trigger: GCATGACGAACTCTGGGAGCAGCTCAACTTGGATAT...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATGTCTCGCCACTTCGATaGCAGGAAGGGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHVSPLR*QEGELG
Trigger: CCCCAACTCCCCTTCCTGGCATCGAAGTGGCGAGAC...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR GCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGCTACTTCATGGATGCTaGGGTGACGGCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMLLHGC*GDGAPL
Trigger: AAGTGGTGCGCCGTCACCGCAGCATCCATGAAGTAG...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGATGGGCACCACGTTCTaGATACTGGATTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKMGTTF*ILDLAM
Trigger: CATTGCCAAATCCAGTATGCAGAACGTGGTGCCCAT...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGTATACTGCCAGCCATTaGGCTGAGCAGGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMYTASH*AEQGVP
Trigger: GGGAACACCCTGCTCAGCCCAATGGCTGGCAGTATA...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CAA 72 bp CACAAAGGCAGGAGAGCACACTTGCTGCTTGCAAGCTaGCTTCCTGAGAACAATCCTTTTAAAGTGACGGTA +
Preference number: 4 (lower is better)
Translates to: HKGRRAHLLLAS*LPENNPFKVTV
Trigger: TACCGTCACTTTAAAAGGATTGTTCTCAGGAAGCAAGCTTGCAAGCAGCAAGTGTGCTCTCCTGCCTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATGGGTGGGATGTTCTCTaGGTCTGGCTTCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHGWDVL*VWLLEA
Trigger: AGCCTCGAGAAGCCAGACTCAGAGAACATCCCACCC...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGGGATGCTGCCCAGGATaGTCTCCTGCTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMGCCPG*SPASHL
Trigger: AAGATGAGAAGCAGGAGAGCATCCTGGGCAGCATCC...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGTCACCTTAAACGTGTaGTTCCGACTGATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKVTLNV*FRLMLS
Trigger: AGACAACATCAGTCGGAAGCACACGTTTAAGGTGAC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS-3UTR CCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATCTCGTCATAAAAGACTaGCTGTCGGGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHLVIKD*LSGGAG
Trigger: CCCAGCCCCTCCCGACAGCCAGTCTTTTATGACGAG...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCGGATGTTGATAAGTTaGTTCTGCAGAGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKRMLIS*FCRDSF
Trigger: GAAGGAGTCTCTGCAGAACCAACTTATCAACATCCG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CCA 90 bp AACTTGCAAGATACAAATCAGAGCTCCCTGGGGTTCTTCCTACCTAATCCAGTACCTTCCATCACATCCTaGATCCTCCAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NLQDTNQSSLGFFLPNPVPSITS*ILQISF
Trigger: AAAGGAGATCTGGAGGATCCAGGATGTGATGGAAGG...TACTGGATTAGGTAGGAAGAACCCCAGGGAGCTCTGATTTGTATCTTGCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATAGAACACAGCACTCTTaGGGCGCTCTTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHRTQHS*GALAVR
Trigger: CCTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCT...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGGGGCTGCCTCCAGGTTaGAGATGTCTACTTCATGGA +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMGLPPG*RCLLHG
Trigger: TCCATGAAGTAGACATCTCCAACCTGGAGGCAGCCC...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
3UTR CAA 72 bp ATGCCTTTCACAAAGGCAGGAGAGCACACTTGCTGCTaGCAAGCTTGCTTCCTGAGAACAATCCTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: MPFTKAGEHTCC*QACFLRTILLK
Trigger: CTTTAAAAGGATTGTTCTCAGGAAGCAAGCTTGCAAGCAGCAAGTGTGCTCTCCTGCCTTTGTGAAAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR TCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATAGAGCCAGACACCATTaGAAAGGGGCTCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHRARHH*KGAQGT
Trigger: AGTCCCCTGAGCCCCTTTTCAATGGTGTCTGGCTCT...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR GCA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGATCTCCTTTTGGATTTaGCGATTGAGCACCTCATTC +
Preference number: 4 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKISFWI*RLSTSF
Trigger: GAATGAGGTGCTCAATCGGCAAATCCAAAAGGAGAT...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR GCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATCTACTTCATGGATGCTaGGGTGACGGCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHLLHGC*GDGAPL
Trigger: AAGTGGTGCGCCGTCACCGCAGCATCCATGAAGTAG...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGGAGATTGTTGTGAGGTaGCTGCTGATGGTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMEIVVR*LLMVFA
Trigger: AGCAAACACCATCAGCAGCCACCTCACAACAATCTC...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CCA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATATCCCGGAACACCTCTaGGTATGCAGGGACTTGCAT +
Preference number: 4 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHIPEHL*VCRDLH
Trigger: ATGCAAGTCCCTGCATACCCAGAGGTGTTCCGGGAT...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR TCA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGAGGTTTCTTTGCAACTaGAGATCTAACAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMRFLCN*RSNSSS
Trigger: GGATGAACTGTTAGATCTTCAGTTGCAAAGAAACCT...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS TCA 90 bp GTGCTCCCTGGTCGGCTTGGGGAGCTATACTGCCAGCCATTGGGCTaGGCAGGGTGTTCCCCACCTCCTGGAACCCTCGGGCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: VLPGRLGELYCQPLG*AGCSPPPGTLGPSG
Trigger: CCCCGATGGCCCGAGGGTTCCAGGAGGTGGGGAACACCCTGCTCAGCCCAATGGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 90 bp GGTGTTCCCCACCTCCTGGAACCCTCGGGCCATCGGGGTAAGGGCTaGCAGGCTCTGAGGCTGTCTCAGGTCCAGACGGGAGGCCATTGG +
Preference number: 5 (lower is better)
Translates to: GVPHLLEPSGHRGKG*QALRLSQVQTGGHW
Trigger: CCAATGGCCTCCCGTCTGGACCTGAGACAGCCTCAGAGCCTGGCAGCCCTTACCCCGATGGCCCGAGGGTTCCAGGAGGTGGGGAACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 90 bp CCATGGCCTGGATCCAGGCCTCCTGCTCCTCGGGGCTCTCGGCACTaGAGAAGTAGGTGCGGACTCCAGCGTGCTCTGCCTGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: PWPGSRPPAPRGSRH*RSRCGLQRALPVGR
Trigger: TCTCCCCACAGGCAGAGCACGCTGGAGTCCGCACCTACTTCTTCAGTGCCGAGAGCCCCGAGGAGCAGGAGGCCTGGATCCAGGCCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS TCA 90 bp GATGTCCTCACTGCGTGGTGGCAGCCGATCAAAACGGGCGCTAGGTaGGCGCACTGGGGAGTAGATGCGGGCACGGCTGTAGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: DVLTAWWQPIKTGAR*AHWGVDAGTAVGAL
Trigger: CAGGGCTCCTACAGCCGTGCCCGCATCTACTCCCCAGTGCGCTCACCTAGCGCCCGTTTTGATCGGCTGCCACCACGCAGTGAGGACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGCGGAAGGAGTGGCGCTaGTCCTCCAGGGCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: VRKQACRAELPQQNSSPQRKEWR*SSRAQG
Trigger: ACCCTGGGCCCTGGAGGACAAGCGCCACTCCTTCCG...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS GCA 90 bp CGGCTCTCAGGGCTGCCTCCAGGTTGGAGATGTCTACTTCATGGATaGTGCGGTGACGGCGCACCACTTTGTAGGCAGGCCGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: RLSGLPPGWRCLLHG*CGDGAPLCRQAGCW
Trigger: CCAGCACCCGGCCTGCCTACAAAGTGGTGCGCCGTCACCGCAGCATCCATGAAGTAGACATCTCCAACCTGGAGGCAGCCCTGAGAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp AAGCTGTGCTCCCTGGTCGGCTTGGGGAGCTATACTGCCAGCCATTaGGCTGAGCAGGGTGTTCCCCACCTCCTGGAACCCTCGGGCCAT +
Preference number: 5 (lower is better)
Translates to: KLCSLVGLGSYTASH*AEQGVPHLLEPSGH
Trigger: ATGGCCCGAGGGTTCCAGGAGGTGGGGAACACCCTGCTCAGCCCAATGGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGAGCACAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp GCGCTTGTCCTCCAGGGCCCAGGGTGGACTAATCCTATCGTAGGCTaGCATGGAGCAGATGCTGTCGGGCCGCACCCCTGGTGGGTAGTA +
Preference number: 5 (lower is better)
Translates to: ALVLQGPGWTNPIVG*HGADAVGPHPWWVV
Trigger: TACTACCCACCAGGGGTGCGGCCCGACAGCATCTGCTCCATGCCAGCCTACGATAGGATTAGTCCACCCTGGGCCCTGGAGGACAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 90 bp ACCTCCTGGAACCCTCGGGCCATCGGGGTAAGGGCTGCCAGGCTCTaGGGCTGTCTCAGGTCCAGACGGGAGGCCATTGGCTTTTACCAA +
Preference number: 5 (lower is better)
Translates to: TSWNPRAIGVRAARL*GCLRSRREAIGFYQ
Trigger: TTGGTAAAAGCCAATGGCCTCCCGTCTGGACCTGAGACAGCCTCAGAGCCTGGCAGCCCTTACCCCGATGGCCCGAGGGTTCCAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 90 bp ATCTTGCGGAGCCTCGCGATCTCCTCCCGTGGTGTCTCATATGCCTaGCCACCAGGTTCCTCGGCTCTCAGGGCTGCCTCCAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ILRSLAISSRGVSYA*PPGSSALRAASRLE
Trigger: CTCCAACCTGGAGGCAGCCCTGAGAGCCGAGGAACCTGGTGGTCAGGCATATGAGACACCACGGGAGGAGATCGCGAGGCTCCGCAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 90 bp CTCCATCTTGCGGAGCCTCGCGATCTCCTCCCGTGGTGTCTCATATaGCTGACCACCAGGTTCCTCGGCTCTCAGGGCTGCCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: LHLAEPRDLLPWCLI*LTTRFLGSQGCLQV
Trigger: AACCTGGAGGCAGCCCTGAGAGCCGAGGAACCTGGTGGTCAGGCATATGAGACACCACGGGAGGAGATCGCGAGGCTCCGCAAGATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp ACCCCCATTCCGGAAGGAGTGGCGCTTGTCCTCCAGGGCCCAGGGTaGACTAATCCTATCGTAGGCTGGCATGGAGCAGATGCTGTCGGG +
Preference number: 5 (lower is better)
Translates to: TPIPEGVALVLQGPG*TNPIVGWHGADAVG
Trigger: CCCGACAGCATCTGCTCCATGCCAGCCTACGATAGGATTAGTCCACCCTGGGCCCTGGAGGACAAGCGCCACTCCTTCCGGAATGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGTGCCCCGAGAGGGGTaGTTCTTCCTCAGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCVPREG*FFLSPS
Trigger: GGAAGGGCTGAGGAAGAACAACCCCTCTCGGGGCAC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAAGTCCTCCTCTGTGCTaGGCTGTGTCAGTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQSPPLC*AVSVPR
Trigger: TCGGGGCACTGACACAGCCAAGCACAGAGGAGGACT...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCGTTTTGGGCTGGCCCTaGGCTGTCTCGCCACTTCGA +
Preference number: 5 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCVLGWP*AVSPLR
Trigger: TCGAAGTGGCGAGACAGCCAAGGGCCAGCCCAAAAC...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS TCA 90 bp TGCCGTCGCCCTCCCCTCGAGTCTTGGCCTCAGGCTCCAGCTTGGTaGGATTGTTGTGAGGTGGCTGCTGATGGTGTTTGCTGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: CRRPPLESWPQAPAW*DCCEVAADGVCWVG
Trigger: TCCCACCCAGCAAACACCATCAGCAGCCACCTCACAACAATCTCACCAAGCTGGAGCCTGAGGCCAAGACTCGAGGGGAGGGCGACGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 90 bp GCCGCCTCATCCGGTCCATCTGCTCCTCGACACTCATTTTCACCTTaGCCTCTCCAGAGAACACAGCACTCTTGGGGCGCTCCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: AASSGPSAPRHSFSP*PLQRTQHSWGAPVR
Trigger: CCTCACGGGAGCGCCCCAAGAGTGCTGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGTCGAGGAGCAGATGGACCGGATGAGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACCGAGTCGCCCGGATGTaGGGCCGCTCTGGAGGAACC +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHRVARM*GRSGGT
Trigger: GGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTCG...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGTTGCGCTGGGCAATTTaGTCAGGGTCAGTACGTGGT +
Preference number: 5 (lower is better)
Translates to: LACAWHESSWRLLLPRKTLRWAI*SGSVRG
Trigger: ACCACGTACTGACCCTGACAAAATTGCCCAGCGCAA...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCGGAAGGAGTGGCGCTaGTCCTCCAGGGCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGRKEWR*SSRAQG
Trigger: ACCCTGGGCCCTGGAGGACAAGCGCCACTCCTTCCG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACCGGAAGGAGTGGCGCTaGTCCTCCAGGGCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHRKEWR*SSRAQG
Trigger: ACCCTGGGCCCTGGAGGACAAGCGCCACTCCTTCCG...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCAGTCCTCCTCTGTGCTaGGCTGTGTCAGTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCSPPLC*AVSVPR
Trigger: TCGGGGCACTGACACAGCCAAGCACAGAGGAGGACT...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGAGAACACAGCACTCTaGGGGCGCTCTTGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWENTAL*GRSCRE
Trigger: CTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGAGAACACAGCACTCTaGGGGCGCTCTTGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLENTAL*GRSCRE
Trigger: CTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTC...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGAGAACACAGCACTCTaGGGGCGCTCTTGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCENTAL*GRSCRE
Trigger: CTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS TCA 90 bp TCCAGCGTGCTCTGCCTTAAACGTGTGCTTCCGACTGATGTTGTCTaGAGGCTGCACAGCCGCCACCCGGAAGCTCAGCAGGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: SSVLCLKRVLPTDVV*RLHSRHPEAQQGDA
Trigger: AGCATCCCCCTGCTGAGCTTCCGGGTGGCGGCTGTGCAGCCTTCAGACAACATCAGTCGGAAGCACACGTTTAAGGCAGAGCACGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038295.15
ENSMUST00000187285.7
ENSMUST00000212252.2
CDS TCA 90 bp CACCTCTGGGTATGCAGGGACCATCTTATCGTGGACCGTGGGGGATaGTGGGTAGTTGTAGGGGAACAGTCCTGCAGGGACTGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: HLWVCRDHLIVDRGG*WVVVGEQSCRDWPP
Trigger: AGGCGGCCAGTCCCTGCAGGACTGTTCCCCTACAACTACCCATCATCCCCCACGGTCCACGATAAGATGGTCCCTGCATACCCAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190186.7
CDS GCA 90 bp CCCGGAGCTGGCCTGCTTATAGAGCCAGCCCGCCTTGGTAACAGGTaGATTGGGGTTCCGCTTCATGGAGTGTGCGCGTTTACCAAAGGC +
Preference number: 5 (lower is better)
Translates to: PGAGLLIEPARLGNR*IGVPLHGVCAFTKG
Trigger: GCCTTTGGTAAACGCGCACACTCCATGAAGCGGAACCCCAATGCACCTGTTACCAAGGCGGGCTGGCTCTATAAGCAGGCCAGCTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS GCA 90 bp GCCGCCTCATCCGGTCCATCTGCTCCTCGACACTCATTTTCACCTTaGCCTCTCCAGAGAACACAGCACTCTTGGGGCGCTCTTGCCGTG +
Preference number: 5 (lower is better)
Translates to: AASSGPSAPRHSFSP*PLQRTQHSWGALAV
Trigger: CACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGTCGAGGAGCAGATGGACCGGATGAGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS CCA 90 bp AGAGTCCCCATCATGAGGTGGAAAAGCTGTGCTCCCTGGTCGGCTTaGGGAGCTATACTGCCAGCCATTGGGCTGAGCAGGGTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: RVPIMRWKSCAPWSA*GAILPAIGLSRVFP
Trigger: GGGGAACACCCTGCTCAGCCCAATGGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGAGCACAGCTTTTCCACCTCATGATGGGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp ATGCCTGACCACCAGGTTCCTCGGCTCTCAGGGCTGCCTCCAGGTTaGAGATGTCTACTTCATGGATGCTGCGGTGACGGCGCACCACTT +
Preference number: 5 (lower is better)
Translates to: MPDHQVPRLSGLPPG*RCLLHGCCGDGAPL
Trigger: AAGTGGTGCGCCGTCACCGCAGCATCCATGAAGTAGACATCTCCAACCTGGAGGCAGCCCTGAGAGCCGAGGAACCTGGTGGTCAGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp ATCTCCCAACCCTTAGGCAAACCTGGGCCGGCAGAGTGTCCACTCTaGATGGGTGAGGCTGTACCAGGGTGCACCCAGCTGGTTGACTTC +
Preference number: 5 (lower is better)
Translates to: ISQPLGKPGPAECPL*MGEAVPGCTQLVDF
Trigger: GAAGTCAACCAGCTGGGTGCACCCTGGTACAGCCTCACCCATCCAGAGTGGACACTCTGCCGGCCCAGGTTTGCCTAAGGGTTGGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212252.2
CDS-3UTR CAA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGGACACCATGTTGTGGTaGGCTATGTCGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: LACAWHESSWRLLLPRKTDTMLW*AMSLLM
Trigger: CATCAACAGCGACATAGCCAACCACAACATGGTGTC...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCGAGTCGCCCGGATGTaGGGCCGCTCTGGAGGAACC +
Preference number: 5 (lower is better)
Translates to: GFQGMESVLSSLLALTHSRVARM*GRSGGT
Trigger: GGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTCG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGACGGAAGGAGTGGCGCTaGTCCTCCAGGGCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: FSLPMTLGERQQALTQIGRKEWR*SSRAQG
Trigger: ACCCTGGGCCCTGGAGGACAAGCGCCACTCCTTCCG...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTACACCACTGTACTGTaGGTCAGTGCCGTGGTCGCC +
Preference number: 5 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWYTTVL*VSAVVA
Trigger: GGCGACCACGGCACTGACCAACAGTACAGTGGTGTA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCCTCCAGATCTCCTTTaGGATTTGCCGATTGAGCAC +
Preference number: 5 (lower is better)
Translates to: LACAWHESSWRLLLPRKTPPDLL*DLPIEH
Trigger: GTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAGG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAACTGGTGGGTACCAGGTaGATATCTCTAGGGGTACCC +
Preference number: 5 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQLVGTR*ISLGVP
Trigger: GGGTACCCCTAGAGATATCAACCTGGTACCCACCAG...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCCTGGTGGGTACCAGGTaGATATCTCTAGGGGTACCC +
Preference number: 5 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCLVGTR*ISLGVP
Trigger: GGGTACCCCTAGAGATATCAACCTGGTACCCACCAG...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCTCCTCAGCAGGAGATTaGGTCCGAGGGGGTACAATG +
Preference number: 5 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCSSAGD*VRGGTM
Trigger: CATTGTACCCCCTCGGACCAAATCTCCTGCTGAGGA...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCTCAGCAGGAGATTaGGTCCGAGGGGGTACAATG +
Preference number: 5 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQSSAGD*VRGGTM
Trigger: CATTGTACCCCCTCGGACCAAATCTCCTGCTGAGGA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 90 bp ACTGGACCCTGGCTTAGTGGGAGAACCCTGAGAGCCAGACACCATTaGAAAGGGGCTCAGGGGACTGGTAAGGCTGGCAGAGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: TGPWLSGRTLRARHH*KGAQGTGKAGRAER
Trigger: CCTCTCAGCTCTGCCAGCCTTACCAGTCCCCTGAGCCCCTTTTCAATGGTGTCTGGCTCTCAGGGTTCTCCCACTAAGCCAGGGTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 90 bp AAGGTGTGGAGGCCATCCCGGAACACCTCTGGGTATGCAGGGACTTaGATGAAAAGGTGGGCCCTGGGAGAGGAGTTCTCCACCATTCGG +
Preference number: 5 (lower is better)
Translates to: KVWRPSRNTSGYAGT*MKRWALGEEFSTIR
Trigger: CCGAATGGTGGAGAACTCCTCTCCCAGGGCCCACCTTTTCATGCAAGTCCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS GCA 90 bp AGGTGGCTGACGGTCCAAGTCCTCCTCTGTGCTTGGCTGTGTCAGTaGCCCGAGAGGGGTTGTTCTTCCTCAGCCCTTCCATCACATCCT +
Preference number: 5 (lower is better)
Translates to: RWLTVQVLLCAWLCQ*PERGCSSSALPSHP
Trigger: AGGATGTGATGGAAGGGCTGAGGAAGAACAACCCCTCTCGGGGCACTGACACAGCCAAGCACAGAGGAGGACTTGGACCGTCAGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp CCTATCGTAGGCTGGCATGGAGCAGATGCTGTCGGGCCGCACCCCTaGTGGGTAGTACTGGTAATCATCAGGATACTGGGAGGAGTAGGG +
Preference number: 5 (lower is better)
Translates to: PIVGWHGADAVGPHP*WVVLVIIRILGGVG
Trigger: CCCTACTCCTCCCAGTATCCTGATGATTACCAGTACTACCCACCAGGGGTGCGGCCCGACAGCATCTGCTCCATGCCAGCCTACGATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp CCCGGAACACCTCTGGGTATGCAGGGACCATCTTATCGTGGACCGTaGGGGATGATGGGTAGTTGTAGGGGAACAGTCCTGCAGGGACTG +
Preference number: 5 (lower is better)
Translates to: PGTPLGMQGPSYRGP*GMMGSCRGTVLQGL
Trigger: CAGTCCCTGCAGGACTGTTCCCCTACAACTACCCATCATCCCCCACGGTCCACGATAAGATGGTCCCTGCATACCCAGAGGTGTTCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCTTGGTAACAGGTGCATaGGGGTTCCGCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFLVTGA*GFRFME
Trigger: CTCCATGAAGCGGAACCCCAATGCACCTGTTACCAA...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATTGGTAACAGGTGCATaGGGGTTCCGCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQLVTGA*GFRFME
Trigger: CTCCATGAAGCGGAACCCCAATGCACCTGTTACCAA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCTTGCGCTGGGCAATTTaGTCAGGGTCAGTACGTGGT +
Preference number: 5 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFLRWAI*SGSVRG
Trigger: ACCACGTACTGACCCTGACAAAATTGCCCAGCGCAA...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCTGCAGAGACTCCTTCTaGTGCAGCAGCTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCCRDSF*CSSFSG
Trigger: CCCAGAGAAGCTGCTGCACAAGAAGGAGTCTCTGCA...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTGGCATGTGCCTGGCATGAGTCCTCCTGGCGCCTCCTGCTCCCGAGGAAGACGCCGGATGTTGATAAGTaGGTTCTGCAGAGACTCCTT +
Preference number: 5 (lower is better)
Translates to: LACAWHESSWRLLLPRKTPDVDK*VLQRLL
Trigger: AAGGAGTCTCTGCAGAACCAACTTATCAACATCCGG...CGTCTTCCTCGGGAGCAGGAGGCGCCAGGAGGACTCATGCCAGGCACATGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCGTGCCCCGAGAGGGGTaGTTCTTCCTCAGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGVPREG*FFLSPS
Trigger: GGAAGGGCTGAGGAAGAACAACCCCTCTCGGGGCAC...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGTGCCCCGAGAGGGGTaGTTCTTCCTCAGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHVPREG*FFLSPS
Trigger: GGAAGGGCTGAGGAAGAACAACCCCTCTCGGGGCAC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCTGGTGGGTACCAGGTaGATATCTCTAGGGGTACCC +
Preference number: 5 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLLVGTR*ISLGVP
Trigger: GGGTACCCCTAGAGATATCAACCTGGTACCCACCAG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCTGGTGGGTACCAGGTaGATATCTCTAGGGGTACCC +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCLVGTR*ISLGVP
Trigger: GGGTACCCCTAGAGATATCAACCTGGTACCCACCAG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCTGGTGGGTACCAGGTaGATATCTCTAGGGGTACCC +
Preference number: 5 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWLVGTR*ISLGVP
Trigger: GGGTACCCCTAGAGATATCAACCTGGTACCCACCAG...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCAGGGCTGCCTCCAGGTaGGAGATGTCTACTTCATGG +
Preference number: 5 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLRAASR*EMSTSW
Trigger: CCATGAAGTAGACATCTCCAACCTGGAGGCAGCCCT...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGAGAACACAGCACTCTaGGGGCGCTCCCGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHENTAL*GRSREE
Trigger: CTCCTCACGGGAGCGCCCCAAGAGTGCTGTGTTCTC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187285.7
CDS TCA 90 bp GGAGAGGCCATTGGTGAGTCCATTCGTGGTCCTTCTCACCACTGCTaGTGGTGTCAACTCCTCCTCAGCAGGAGATTTGGTCCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GEAIGESIRGPSHHC*WCQLLLSRRFGPRG
Trigger: CCCCCTCGGACCAAATCTCCTGCTGAGGAGGAGTTGACACCATCAGCAGTGGTGAGAAGGACCACGAATGGACTCACCAATGGCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 90 bp GCTGGGAGCTGTAGGCTCCTCCGCTTTTCCTTCATGGAACCGCTCTaGTGCCGCCTCATCCGGTCCATCTGCTCCTCGACACTCATTTTC +
Preference number: 5 (lower is better)
Translates to: AGSCRLLRFSFMEPL*CRLIRSICSSTLIF
Trigger: GAAAATGAGTGTCGAGGAGCAGATGGACCGGATGAGGCGGCATCAGAGCGGTTCCATGAAGGAAAAGCGGAGGAGCCTACAGCTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 90 bp CCAGTGAACAGTCACCTTAAACGTGTGCTTCCGACTGATGTTGTCTaGAGGCTGCACAGCCGCCACCCGGAAGCTCAGCAGGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: PVNSHLKRVLPTDVV*RLHSRHPEAQQGDA
Trigger: AGCATCCCCCTGCTGAGCTTCCGGGTGGCGGCTGTGCAGCCTTCAGACAACATCAGTCGGAAGCACACGTTTAAGGTGACTGTTCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS GCA 90 bp CTTTGGGGAGCTGATAGATCGCCTCATCACGTAGGCAGCGGGATCTaGATAGATGTCCTCACTGCGTGGTGGCAGCCGATCAAAACGGGC +
Preference number: 5 (lower is better)
Translates to: LWGADRSPHHVGSGI*IDVLTAWWQPIKTG
Trigger: GCCCGTTTTGATCGGCTGCCACCACGCAGTGAGGACATCTATGCAGATCCCGCTGCCTACGTGATGAGGCGATCTATCAGCTCCCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000187299.2
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS GCA 90 bp TTCACCTTGCCCTCTCCAGAGAACACAGCACTCTTGGGGCGCTCTTaGCGTGAGGAGAGGCCATTGGTGAGTCCATTCGTGGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FTLPSPENTALLGRS*REERPLVSPFVVLL
Trigger: GAGAAGGACCACGAATGGACTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTCTGGAGAGGGCAAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS GCA 90 bp TGGTGTCTCATATGCCTGACCACCAGGTTCCTCGGCTCTCAGGGCTaGCTCCAGGTTGGAGATGTCTACTTCATGGATGCTGCGGTGACG +
Preference number: 5 (lower is better)
Translates to: WCLICLTTRFLGSQG*LQVGDVYFMDAAVT
Trigger: CGTCACCGCAGCATCCATGAAGTAGACATCTCCAACCTGGAGGCAGCCCTGAGAGCCGAGGAACCTGGTGGTCAGGCATATGAGACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp CATTGGGGTTCCGCTTCATGGAGTGTGCGCGTTTACCAAAGGCAATaGCTTTTCGGGAAGTTCGAGTCGCCCGGATGTTGGGCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: HWGSASWSVRVYQRQ*LFGKFESPGCWAAL
Trigger: CAGAGCGGCCCAACATCCGGGCGACTCGAACTTCCCGAAAAGCCATTGCCTTTGGTAAACGCGCACACTCCATGAAGCGGAACCCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 90 bp TTGCCCAGCAGCTTATCCGTGTCTTGCTCGTTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACCTCTGGGTATGCAGGGACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LPSSLSVSCSFSLKV*RPSRNTSGYAGTCW
Trigger: CCAGCAGGTCCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187299.2
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCACCTCAGACACCATGTaGTGGTTGGCTATGTCGCTG +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCTSDTM*WLAMSL
Trigger: CAGCGACATAGCCAACCACAACATGGTGTCTGAGGT...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCTTGGTAACAGGTGCATaGGGGTTCCGCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCLVTGA*GFRFME
Trigger: CTCCATGAAGCGGAACCCCAATGCACCTGTTACCAA...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCTTGGTAACAGGTGCATaGGGGTTCCGCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLLVTGA*GFRFME
Trigger: CTCCATGAAGCGGAACCCCAATGCACCTGTTACCAA...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAACCAAAGTCTCTTTCTaGACTTCAGGCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQTKVSF*TSGLSG
Trigger: GCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGGT...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGTTGCGCTGGGCAATTTaGTCAGGGTCAGTACGTGGT +
Preference number: 5 (lower is better)
Translates to: VRKQACRAELPQQNSSPQLRWAI*SGSVRG
Trigger: ACCACGTACTGACCCTGACAAAATTGCCCAGCGCAA...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTTGCGCTGGGCAATTTaGTCAGGGTCAGTACGTGGT +
Preference number: 5 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWLRWAI*SGSVRG
Trigger: ACCACGTACTGACCCTGACAAAATTGCCCAGCGCAA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTCTTGCTCGTTTAGCTaGAAGGTGTGGAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWSCSFS*KVWRPS
Trigger: GGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTATCTTGCTCGTTTAGCTaGAAGGTGTGGAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLSCSFS*KVWRPS
Trigger: GGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGA...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCTCTTGCTCGTTTAGCTaGAAGGTGTGGAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCSCSFS*KVWRPS
Trigger: GGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGA...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAAAGCTCCACCCGGATGTaGATAAGTTGGTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQSSTRM*ISWFCR
Trigger: TCTGCAGAACCAACTTATCAACATCCGGGTGGAGCT...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTTACACCACTGTACTGTaGGTCAGTGCCGTGGTCGCC +
Preference number: 5 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPYTTVL*VSAVVA
Trigger: GGCGACCACGGCACTGACCAACAGTACAGTGGTGTA...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCTTCTGGATATCCAAGTaGAGCTGCTCCCAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCFWISK*SCSQSS
Trigger: CGAACTCTGGGAGCAGCTCAACTTGGATATCCAGAA...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTAGTCCTCCTCTGTGCTaGGCTGTGTCAGTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: PRSLSLELIVFFGSSRVASPPLC*AVSVPR
Trigger: TCGGGGCACTGACACAGCCAAGCACAGAGGAGGACT...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCAGAAGCGGCTCTCATaGGGGAGTGGAGGGACGGTG +
Preference number: 5 (lower is better)
Translates to: GFQGMESVLSSLLALTHSQKRLS*GSGGTV
Trigger: CACCGTCCCTCCACTCCCCAATGAGAGCCGCTTCTG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR CAA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCGAGAACACAGCACTCTaGGGGCGCTCTTGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGENTAL*GRSCRE
Trigger: CTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTC...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS TCA 90 bp CACACAGCTTGCCCAGCAGCTTATCCGTGTCTTGCTCGTTTAGCTTaGAGGTGTGGAGGCCATCCCGGAACACCTCTGGGTATGCAGGGA +
Preference number: 5 (lower is better)
Translates to: HTACPAAYPCLARLA*RCGGHPGTPLGMQG
Trigger: TCCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCAAGCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000187299.2
ENSMUST00000190186.7
CDS TCA 90 bp ACACAGCACTCTTGGGGCGCTCTTGCCGTGAGGAGAGGCCATTGGTaGGTCCATTCGTGGTCCTTCTCACCACTGCTGATGGTGTCAACT +
Preference number: 5 (lower is better)
Translates to: TQHSWGALAVRRGHW*VHSWSFSPLLMVST
Trigger: AGTTGACACCATCAGCAGTGGTGAGAAGGACCACGAATGGACTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCCAAGAGTGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS TCA 90 bp AGAACACAGCACTCTTGGGGCGCTCCCGTGAGGAGAGGCCATTGGTaGGTCCATTCGTGGTCCTTCTCACCACTGCTGATGGTGTCAACT +
Preference number: 5 (lower is better)
Translates to: RTQHSWGAPVRRGHW*VHSWSFSPLLMVST
Trigger: AGTTGACACCATCAGCAGTGGTGAGAAGGACCACGAATGGACTCACCAATGGCCTCTCCTCACGGGAGCGCCCCAAGAGTGCTGTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187285.7
CDS GCA 90 bp GCCCGCCTTGGTAACAGGTGCATTGGGGTTCCGCTTCATGGAGTGTaGGCGTTTACCAAAGGCAATGGCTTTTCGGGAAGTTCGAGTCGC +
Preference number: 5 (lower is better)
Translates to: ARLGNRCIGVPLHGV*AFTKGNGFSGSSSR
Trigger: GCGACTCGAACTTCCCGAAAAGCCATTGCCTTTGGTAAACGCGCACACTCCATGAAGCGGAACCCCAATGCACCTGTTACCAAGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS GCA 90 bp CGCAGCTGCTGCACCAGCCGCTCCTGTTCCCTTACTACCTTGTTCTaGTCACACAGCTTGCCCAGCAGCTTATCCGTGTCTTGCTCGTTT +
Preference number: 5 (lower is better)
Translates to: RSCCTSRSCSLTTLF*SHSLPSSLSVSCSF
Trigger: AAACGAGCAAGACACGGATAAGCTGCTGGGCAAGCTGTGTGAGCAGAACAAGGTAGTAAGGGAACAGGAGCGGCTGGTGCAGCAGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp GCCCGGATGTTGGGCCGCTCTGGAGGAACCTCAGACACCATGTTGTaGTTGGCTATGTCGCTGTTGATGGTAGCAGAACGTTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: ARMLGRSGGTSDTML*LAMSLLMVAERFPP
Trigger: AGGTGGGAAACGTTCTGCTACCATCAACAGCGACATAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 90 bp ATCGTAGGCTGGCATGGAGCAGATGCTGTCGGGCCGCACCCCTGGTaGGTAGTACTGGTAATCATCAGGATACTGGGAGGAGTAGGGATT +
Preference number: 5 (lower is better)
Translates to: IVGWHGADAVGPHPW*VVLVIIRILGGVGI
Trigger: AATCCCTACTCCTCCCAGTATCCTGATGATTACCAGTACTACCCACCAGGGGTGCGGCCCGACAGCATCTGCTCCATGCCAGCCTACGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp TTGCCCAGCAGCTTATCCGTGTCTTGCTCGTTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACCTCTGGGTATGCAGGGACCTTTGGG +
Preference number: 5 (lower is better)
Translates to: LPSSLSVSCSFSLKV*RPSRNTSGYAGTFG
Trigger: CCCAAAGGTCCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGACACCATGTTGTGGTaGGCTATGTCGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWDTMLW*AMSLLM
Trigger: CATCAACAGCGACATAGCCAACCACAACATGGTGTC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp CTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTAGACAGATGCTGTTCCCTTACTACCTaGTTCTGCTCACACAGCTTG +
Preference number: 5 (lower is better)
Translates to: LLQPGDPSPGEGGRLDRCCSLTT*FCSHSL
Trigger: CAAGCTGTGTGAGCAGAACAAGGTAGTAAGGGAACA...GCATCTGTCTAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATGTTCCCTTACTACCTaGTTCTGCTCACACAGCTTG +
Preference number: 5 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQCSLTT*FCSHSL
Trigger: CAAGCTGTGTGAGCAGAACAAGGTAGTAAGGGAACA...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTTGCAGAGACTCCTTCTaGTGCAGCAGCTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPCRDSF*CSSFSG
Trigger: CCCAGAGAAGCTGCTGCACAAGAAGGAGTCTCTGCA...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGCTTCCCACCAGCACATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAACCGGATGTTGATAAGTaGGTTCTGCAGAGACTCCTT +
Preference number: 5 (lower is better)
Translates to: SFPPAHGLHGGWCRRATQPDVDK*VLQRLL
Trigger: AAGGAGTCTCTGCAGAACCAACTTATCAACATCCGG...TTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATGTGCTGGTGGGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTACACCACTGTACTGTaGGTCAGTGCCGTGGTCGCC +
Preference number: 5 (lower is better)
Translates to: PRSLSLELIVFFGSSRVAYTTVL*VSAVVA
Trigger: GGCGACCACGGCACTGACCAACAGTACAGTGGTGTA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCTTCTGGATATCCAAGTaGAGCTGCTCCCAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCFWISK*SCSQSS
Trigger: CGAACTCTGGGAGCAGCTCAACTTGGATATCCAGAA...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCCCTCCAGATCTCCTTTaGGATTTGCCGATTGAGCAC +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCPPDLL*DLPIEH
Trigger: GTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAGG...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCTCCAGATCTCCTTTaGGATTTGCCGATTGAGCAC +
Preference number: 5 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPPDLL*DLPIEH
Trigger: GTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGGGTACAATGCCAACTTaGTTGAGAGCTGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWGTMPT*LRAACF
Trigger: GAAGCAGGCAGCTCTCAACAAAGTTGGCATTGTACC...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGGTACAATGCCAACTTaGTTGAGAGCTGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLGTMPT*LRAACF
Trigger: GAAGCAGGCAGCTCTCAACAAAGTTGGCATTGTACC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CATGGACTCCACGGGGGATGGTGCAGGAGGGCCACACAATCCATCCAGAACTGCGGTACAATGCCAACTTaGTTGAGAGCTGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: HGLHGGWCRRATQSIQNCGTMPT*LRAACF
Trigger: GAAGCAGGCAGCTCTCAACAAAGTTGGCATTGTACC...GCAGTTCTGGATGGATTGTGTGGCCCTCCTGCACCATCCCCCGTGGAGTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGTTCTCACCTACTTCAGCCAGGCGACCCTTCTCCAGGGGAGGGTGGTCGGCTATTGGCAATGAGCGTCTaGATCCTCTCCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSHLLQPGDPSPGEGGRLLAMSV*ILSTFF
Trigger: GAAGAAGGTGGAGAGGATCAAGACGCTCATTGCCAA...TAGCCGACCACCCTCCCCTGGAGAAGGGTCGCCTGGCTGAAGTAGGTGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTTGGCAATGAGCGTCTaGATCCTCTCCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWLAMSV*ILSTFF
Trigger: GAAGAAGGTGGAGAGGATCAAGACGCTCATTGCCAA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCTTGGCAATGAGCGTCTaGATCCTCTCCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLLAMSV*ILSTFF
Trigger: GAAGAAGGTGGAGAGGATCAAGACGCTCATTGCCAA...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 90 bp GGGCCGGCAGAGTGTCCACTCTGGATGGGTGAGGCTGTACCAGGGTaGACCCAGCTGGTTGACTTCTCCTCATCATTGATGAAGAAGATT +
Preference number: 5 (lower is better)
Translates to: GPAECPLWMGEAVPG*TQLVDFSSSLMKKI
Trigger: AATCTTCTTCATCAATGATGAGGAGAAGTCAACCAGCTGGGTGCACCCTGGTACAGCCTCACCCATCCAGAGTGGACACTCTGCCGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212252.2
CDS CCA 90 bp AATGGCTTTTCGGGAAGTTCGAGTCGCCCGGATGTTGGGCCGCTCTaGAGGAACCTCAGACACCATGTTGTGGTTGGCTATGTCGCTGTT +
Preference number: 5 (lower is better)
Translates to: NGFSGSSSRPDVGPL*RNLRHHVVVGYVAV
Trigger: AACAGCGACATAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTCGAACTTCCCGAAAAGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 90 bp TACCAAAGGCAATGGCTTTTCGGGAAGTTCGAGTCGCCCGGATGTTaGGCCGCTCTGGAGGAACCTCAGACACCATGTTGTGGTTGGCTA +
Preference number: 5 (lower is better)
Translates to: YQRQWLFGKFESPGC*AALEEPQTPCCGWL
Trigger: TAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTCGAACTTCCCGAAAAGCCATTGCCTTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 90 bp TTGCCCAGCAGCTTATCCGTGTCTTGCTCGTTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACCTCTGGGTATGCAGGGACTTGCATG +
Preference number: 5 (lower is better)
Translates to: LPSSLSVSCSFSLKV*RPSRNTSGYAGTCM
Trigger: CATGCAAGTCCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCGAGTCGCCCGGATGTaGGGCCGCTCTGGAGGAACC +
Preference number: 5 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKRVARM*GRSGGT
Trigger: GGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTCG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTTTGCGCTGGGCAATTTaGTCAGGGTCAGTACGTGGT +
Preference number: 5 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPLRWAI*SGSVRG
Trigger: ACCACGTACTGACCCTGACAAAATTGCCCAGCGCAA...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGACTGGGACCAGGGACGGCCACCCCGGTCCCTCACACATCACCAATCCCTTTCTGGTTCATAGAGCTTTaGCGCTGGGCAATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: RLGPGTATPVPHTSPIPFWFIEL*RWAILS
Trigger: TGACAAAATTGCCCAGCGCAAAAGCTCTATGAACCA...GAAAGGGATTGGTGATGTGTGAGGGACCGGGGTGGCCGTCCCTGGTCCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGCGGAAGGAGTGGCGCTaGTCCTCCAGGGCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKRKEWR*SSRAQG
Trigger: ACCCTGGGCCCTGGAGGACAAGCGCCACTCCTTCCG...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTTCTTGCTCGTTTAGCTaGAAGGTGTGGAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPSCSFS*KVWRPS
Trigger: GGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGA...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCCCGGATGTTGATAAGTaGGTTCTGCAGAGACTCCTT +
Preference number: 5 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLPDVDK*VLQRLL
Trigger: AAGGAGTCTCTGCAGAACCAACTTATCAACATCCGG...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGGTGCCCCGAGAGGGGTaGTTCTTCCTCAGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGVPREG*FFLSPS
Trigger: GGAAGGGCTGAGGAAGAACAACCCCTCTCGGGGCAC...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACTCCTCAGCAGGAGATTaGGTCCGAGGGGGTACAATG +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHSSAGD*VRGGTM
Trigger: CATTGTACCCCCTCGGACCAAATCTCCTGCTGAGGA...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTCCTCAGCAGGAGATTaGGTCCGAGGGGGTACAATG +
Preference number: 5 (lower is better)
Translates to: PRSLSLELIVFFGSSRVASSAGD*VRGGTM
Trigger: CATTGTACCCCCTCGGACCAAATCTCCTGCTGAGGA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGACACTCATTTTCACCTaGCCCTCTCCAGAGAACACA +
Preference number: 5 (lower is better)
Translates to: VRKQACRAELPQQNSSPQTLIFT*PSPENT
Trigger: TGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGT...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTAGGGCTGCCTCCAGGTaGGAGATGTCTACTTCATGG +
Preference number: 5 (lower is better)
Translates to: PRSLSLELIVFFGSSRVARAASR*EMSTSW
Trigger: CCATGAAGTAGACATCTCCAACCTGGAGGCAGCCCT...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCAGGGCTGCCTCCAGGTaGGAGATGTCTACTTCATGG +
Preference number: 5 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGRAASR*EMSTSW
Trigger: CCATGAAGTAGACATCTCCAACCTGGAGGCAGCCCT...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 90 bp TTGCCCAGCAGCTTATCCGTGTCTTGCTCGTTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACCTCTGGGTATGCAGGGACCATCTTA +
Preference number: 5 (lower is better)
Translates to: LPSSLSVSCSFSLKV*RPSRNTSGYAGTIL
Trigger: TAAGATGGTCCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTTCTTGCTCGTTTAGCTaGAAGGTGTGGAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: PRSLSLELIVFFGSSRVASCSFS*KVWRPS
Trigger: GGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGA...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGCCTCGATCTCCTTTTGGATTaGCCGATTGAGCACCTCATT +
Preference number: 5 (lower is better)
Translates to: SLRQLGLNGRKVMARPGLDLLLD*PIEHLI
Trigger: AATGAGGTGCTCAATCGGCAAATCCAAAAGGAGATC...GAGGCCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACTCAGGGATGAGGACTTaGTCTGGAGTAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHSGMRT*SGVESS
Trigger: GGAGCTCTCTACTCCAGACAAAGTCCTCATCCCTGA...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp ATGCAGTCCGGGCGAACCTGGGGACCAGCCCTTTACAATGACTGGGTAATGGGATTGGCAATGAGCGTCTaGATCCTCTCCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: MQSGRTWGPALYNDWVMGLAMSV*ILSTFF
Trigger: GAAGAAGGTGGAGAGGATCAAGACGCTCATTGCCAA...TCCCATTACCCAGTCATTGTAAAGGGCTGGTCCCCAGGTTCGCCCGGACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS TCA 90 bp GTTCTCATACACCACTGTACTGTTGGTCAGTGCCGTGGTCGCCTGTaGCAGCTCCACCCGGATGTTGATAAGTTGGTTCTGCAGAGACTC +
Preference number: 5 (lower is better)
Translates to: VLIHHCTVGQCRGRL*QLHPDVDKLVLQRL
Trigger: GAGTCTCTGCAGAACCAACTTATCAACATCCGGGTGGAGCTGTCACAGGCGACCACGGCACTGACCAACAGTACAGTGGTGTATGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAACCTCAGACACCATGTaGTGGTTGGCTATGTCGCTG +
Preference number: 5 (lower is better)
Translates to: FSLPMTLGERQQALTQIGTSDTM*WLAMSL
Trigger: CAGCGACATAGCCAACCACAACATGGTGTCTGAGGT...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACAGCTCCACCCGGATGTaGATAAGTTGGTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHSSTRM*ISWFCR
Trigger: TCTGCAGAACCAACTTATCAACATCCGGGTGGAGCT...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTTACACCACTGTACTGTaGGTCAGTGCCGTGGTCGCC +
Preference number: 5 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLAYTTVL*VSAVVA
Trigger: GGCGACCACGGCACTGACCAACAGTACAGTGGTGTA...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACTTCTGGATATCCAAGTaGAGCTGCTCCCAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHFWISK*SCSQSS
Trigger: CGAACTCTGGGAGCAGCTCAACTTGGATATCCAGAA...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCTTCTGGATATCCAAGTaGAGCTGCTCCCAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGFWISK*SCSQSS
Trigger: CGAACTCTGGGAGCAGCTCAACTTGGATATCCAGAA...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GTCAGAAAGCAAGCTTGCCGAGCTGAGCTGCCACAGCAGAACTCCAGCCCCCAGTTTTGGATTTGCCGATaGAGCACCTCATTCTGGATA +
Preference number: 5 (lower is better)
Translates to: VRKQACRAELPQQNSSPQFWICR*STSFWI
Trigger: TATCCAGAATGAGGTGCTCAATCGGCAAATCCAAAA...CTGGGGGCTGGAGTTCTGCTGTGGCAGCTCAGCTCGGCAAGCTTGCTTTCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp GGCATCGCTGAGGCAGCTGGGACTGAATGGGAGGAAGGTGATGGCAAGACCTGGTTTTGGATTTGCCGATaGAGCACCTCATTCTGGATA +
Preference number: 5 (lower is better)
Translates to: GIAEAAGTEWEEGDGKTWFWICR*STSFWI
Trigger: TATCCAGAATGAGGTGCTCAATCGGCAAATCCAAAA...CCAGGTCTTGCCATCACCTTCCTCCCATTCAGTCCCAGCTGCCTCAGCGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACGGTACAATGCCAACTTaGTTGAGAGCTGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHGTMPT*LRAACF
Trigger: GAAGCAGGCAGCTCTCAACAAAGTTGGCATTGTACC...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCGGTACAATGCCAACTTaGTTGAGAGCTGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGGTMPT*LRAACF
Trigger: GAAGCAGGCAGCTCTCAACAAAGTTGGCATTGTACC...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATCAGGGATGAGGACTTaGTCTGGAGTAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: FSLPMTLGERQQALTQIGSGMRT*SGVESS
Trigger: GGAGCTCTCTACTCCAGACAAAGTCCTCATCCCTGA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTCAGGGATGAGGACTTaGTCTGGAGTAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GFQGMESVLSSLLALTHSSGMRT*SGVESS
Trigger: GGAGCTCTCTACTCCAGACAAAGTCCTCATCCCTGA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCACCAAAGTCTCTTTCTaGACTTCAGGCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GFQGMESVLSSLLALTHSTKVSF*TSGLSG
Trigger: GCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGGT...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGTGCAGAGACTCCTTCTaGTGCAGCAGCTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGCRDSF*CSSFSG
Trigger: CCCAGAGAAGCTGCTGCACAAGAAGGAGTCTCTGCA...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp AGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGGCCCGGATGTTGATAAGTaGGTTCTGCAGAGACTCCTT +
Preference number: 5 (lower is better)
Translates to: RSLSLELIVFFGSSRVAGPDVDK*VLQRLL
Trigger: AAGGAGTCTCTGCAGAACCAACTTATCAACATCCGG...GCCAGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGAAGCTCCACCCGGATGTaGATAAGTTGGTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: FSLPMTLGERQQALTQIGSSTRM*ISWFCR
Trigger: TCTGCAGAACCAACTTATCAACATCCGGGTGGAGCT...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATTCTGGATATCCAAGTaGAGCTGCTCCCAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: FSLPMTLGERQQALTQIGFWISK*SCSQSS
Trigger: CGAACTCTGGGAGCAGCTCAACTTGGATATCCAGAA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTGATCTCCTTTTGGATTaGCCGATTGAGCACCTCATT +
Preference number: 5 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPDLLLD*PIEHLI
Trigger: AATGAGGTGCTCAATCGGCAAATCCAAAAGGAGATC...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCCCTCCAGATCTCCTTTaGGATTTGCCGATTGAGCAC +
Preference number: 5 (lower is better)
Translates to: GFQGMESVLSSLLALTHSPPDLL*DLPIEH
Trigger: GTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAGG...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AACTTGCAAGATACAAATCAGAGCTCCCTGGGGTTCTTCCTACCTAATCCAGTAGTGCCCCGAGAGGGGTaGTTCTTCCTCAGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: NLQDTNQSSLGFFLPNPVVPREG*FFLSPS
Trigger: GGAAGGGCTGAGGAAGAACAACCCCTCTCGGGGCAC...TACTGGATTAGGTAGGAAGAACCCCAGGGAGCTCTGATTTGTATCTTGCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGAGTCCTCCTCTGTGCTaGGCTGTGTCAGTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKSPPLC*AVSVPR
Trigger: TCGGGGCACTGACACAGCCAAGCACAGAGGAGGACT...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACACACTCATTTTCACCTaGCCCTCTCCAGAGAACACA +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHTLIFT*PSPENT
Trigger: TGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGT...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCTCAGGGATGAGGACTTaGTCTGGAGTAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: MPELEVRLQKPARSAVKFSGMRT*SGVESS
Trigger: GGAGCTCTCTACTCCAGACAAAGTCCTCATCCCTGA...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATTGGCAATGAGCGTCTaGATCCTCTCCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FSLPMTLGERQQALTQIGLAMSV*ILSTFF
Trigger: GAAGAAGGTGGAGAGGATCAAGACGCTCATTGCCAA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 90 bp ACCTCATTCTGGATATCCAAGTTGAGCTGCTCCCAGAGTTCGTCATaGAGGGCAGAGACCTCCGATTCGAGGTTCTCATACACCACTGTA +
Preference number: 5 (lower is better)
Translates to: TSFWISKLSCSQSSS*RAETSDSRFSYTTV
Trigger: TACAGTGGTGTATGAGAACCTCGAATCGGAGGTCTCTGCCCTGCATGACGAACTCTGGGAGCAGCTCAACTTGGATATCCAGAATGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS CCA 90 bp GTCAGGTTCCAGGTCAATGTACCGTTCAGGGATGAGGACTTTGTCTaGAGTAGAGAGCTCCTTACTGATGTCCACATCGTAGTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VRFQVNVPFRDEDFV*SRELLTDVHIVVLR
Trigger: CCTCAGCACTACGATGTGGACATCAGTAAGGAGCTCTCTACTCCAGACAAAGTCCTCATCCCTGAACGGTACATTGACCTGGAACCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AGAGCCCCAGGTGTGCAATGGATGCTATCAGAAGGTGGCTCTGTGGAGCTTCACTGGTTCATAGAGCTTTaGCGCTGGGCAATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: RAPGVQWMLSEGGSVELHWFIEL*RWAILS
Trigger: TGACAAAATTGCCCAGCGCAAAAGCTCTATGAACCA...GTGAAGCTCCACAGAGCCACCTTCTGATAGCATCCATTGCACACCTGGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATGTTCCCTTACTACCTaGTTCTGCTCACACAGCTTG +
Preference number: 5 (lower is better)
Translates to: FSLPMTLGERQQALTQIGCSLTT*FCSHSL
Trigger: CAAGCTGTGTGAGCAGAACAAGGTAGTAAGGGAACA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CTTGCTACCAAGCACCTCAGTTGGAGCTGGCATGTGCCTGGCATGAGTCCTCCTTTTTGGATTTGCCGATaGAGCACCTCATTCTGGATA +
Preference number: 5 (lower is better)
Translates to: LATKHLSWSWHVPGMSPPFWICR*STSFWI
Trigger: TATCCAGAATGAGGTGCTCAATCGGCAAATCCAAAA...AGGAGGACTCATGCCAGGCACATGCCAGCTCCAACTGAGGTGCTTGGTAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CCCAGGAGCCTCTCCCTAGAACTCATCGTCTTCTTTGGCTCAAGCAGGGTAGCTGATCTCCTTTTGGATTaGCCGATTGAGCACCTCATT +
Preference number: 5 (lower is better)
Translates to: PRSLSLELIVFFGSSRVADLLLD*PIEHLI
Trigger: AATGAGGTGCTCAATCGGCAAATCCAAAAGGAGATC...AGCTACCCTGCTTGAGCCAAAGAAGACGATGAGTTCTAGGGAGAGGCTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCACACTCATTTTCACCTaGCCCTCTCCAGAGAACACA +
Preference number: 5 (lower is better)
Translates to: GFQGMESVLSSLLALTHSTLIFT*PSPENT
Trigger: TGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGT...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp AACACATCACTTCAGATCTGGGGAGAGGTCTGTAAGCTTCCCAACCTCCTTGCTGACACCATGTTGTGGTaGGCTATGTCGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: NTSLQIWGEVCKLPNLLADTMLW*AMSLLM
Trigger: CATCAACAGCGACATAGCCAACCACAACATGGTGTC...AGCAAGGAGGTTGGGAAGCTTACAGACCTCTCCCCAGATCTGAAGTGATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTGGTTCATAGAGCTTTaGCGCTGGGCAATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: GFQGMESVLSSLLALTHSWFIEL*RWAILS
Trigger: TGACAAAATTGCCCAGCGCAAAAGCTCTATGAACCA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TTCTCTCTGCCTATGACCCTGGGAGAGAGACAGCAGGCCTTGACACAGATAGGATGGTTCATAGAGCTTTaGCGCTGGGCAATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: FSLPMTLGERQQALTQIGWFIEL*RWAILS
Trigger: TGACAAAATTGCCCAGCGCAAAAGCTCTATGAACCA...TCCTATCTGTGTCAAGGCCTGCTGTCTCTCTCCCAGGGTCATAGGCAGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCTGTTCCCTTACTACCTaGTTCTGCTCACACAGCTTG +
Preference number: 5 (lower is better)
Translates to: MPELEVRLQKPARSAVKFCSLTT*FCSHSL
Trigger: CAAGCTGTGTGAGCAGAACAAGGTAGTAAGGGAACA...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp AAAGCCGGCCAGAAGTGCTGTCAAATTCCCAAACACATCACTTCAGATCTGGGGAGCTCCACCCGGATGTaGATAAGTTGGTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: KAGQKCCQIPKHITSDLGSSTRM*ISWFCR
Trigger: TCTGCAGAACCAACTTATCAACATCCGGGTGGAGCT...CCCCAGATCTGAAGTGATGTGTTTGGGAATTTGACAGCACTTCTGGCCGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCGATCTCCTTTTGGATTaGCCGATTGAGCACCTCATT +
Preference number: 5 (lower is better)
Translates to: GFQGMESVLSSLLALTHSDLLLD*PIEHLI
Trigger: AATGAGGTGCTCAATCGGCAAATCCAAAAGGAGATC...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGTCCTCAGCAGGAGATTaGGTCCGAGGGGGTACAATG +
Preference number: 5 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKSSAGD*VRGGTM
Trigger: CATTGTACCCCCTCGGACCAAATCTCCTGCTGAGGA...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp ATGCCAGAGTTGGAGGTCAGGCTTCAAAAGCCGGCCAGAAGTGCTGTCAAATTCACACTCATTTTCACCTaGCCCTCTCCAGAGAACACA +
Preference number: 5 (lower is better)
Translates to: MPELEVRLQKPARSAVKFTLIFT*PSPENT
Trigger: TGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGT...GAATTTGACAGCACTTCTGGCCGGCTTTTGAAGCCTGACCTCCAACTCTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp GGGTTCCAAGGGATGGAGTCTGTCTTGTCTTCACTTCTAGCCCTCACCCATAGCTTTTGGATTTGCCGATaGAGCACCTCATTCTGGATA +
Preference number: 5 (lower is better)
Translates to: GFQGMESVLSSLLALTHSFWICR*STSFWI
Trigger: TATCCAGAATGAGGTGCTCAATCGGCAAATCCAAAA...GCTATGGGTGAGGGCTAGAAGTGAAGACAAGACAGACTCCATCCCTTGGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 90 bp TGGATGTCGAAATGTGTTGCGTCTTTCATTGTGGTTGATGAAGTATaGAGCTCCTTCCGGGGTAGAATCCATCTCCCAACCCTTAGGCAA +
Preference number: 5 (lower is better)
Translates to: WMSKCVASFIVVDEV*SSFRGRIHLPTLRQ
Trigger: TTGCCTAAGGGTTGGGAGATGGATTCTACCCCGGAAGGAGCTGCATACTTCATCAACCACAATGAAAGACGCAACACATTTCGACATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212252.2
CDS-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGACCAAAGTCTCTTTCTaGACTTCAGGCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKTKVSF*TSGLSG
Trigger: GCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGGT...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGTACACCACTGTACTGTaGGTCAGTGCCGTGGTCGCC +
Preference number: 5 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMYTTVL*VSAVVA
Trigger: GGCGACCACGGCACTGACCAACAGTACAGTGGTGTA...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS CCA 90 bp CATGTCCAAGGCCGATGTTTTCAAGTCAAACTTTTTGTTCTCCTCTaGGATCTGGCCAGTCACTGGATGTCGAAATGTGTTGCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: HVQGRCFQVKLFVLL*DLASHWMSKCVASF
Trigger: GAAAGACGCAACACATTTCGACATCCAGTGACTGGCCAGATCCCAGAGGAGAACAAAAAGTTTGACTTGAAAACATCGGCCTTGGACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS-3UTR CAA 90 bp AACTTGCAAGATACAAATCAGAGCTCCCTGGGGTTCTTCCTACCTAATCCAGTAACCAAAGTCTCTTTCTaGACTTCAGGCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: NLQDTNQSSLGFFLPNPVTKVSF*TSGLSG
Trigger: GCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGGT...TACTGGATTAGGTAGGAAGAACCCCAGGGAGCTCTGATTTGTATCTTGCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGTGTTCCCTTACTACCTaGTTCTGCTCACACAGCTTG +
Preference number: 5 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKCSLTT*FCSHSL
Trigger: CAAGCTGTGTGAGCAGAACAAGGTAGTAAGGGAACA...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGACACTCATTTTCACCTaGCCCTCTCCAGAGAACACA +
Preference number: 5 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKTLIFT*PSPENT
Trigger: TGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGT...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGAGGGCTGCCTCCAGGTaGGAGATGTCTACTTCATGG +
Preference number: 5 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMRAASR*EMSTSW
Trigger: CCATGAAGTAGACATCTCCAACCTGGAGGCAGCCCT...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGGATCTCCTTTTGGATTaGCCGATTGAGCACCTCATT +
Preference number: 5 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKDLLLD*PIEHLI
Trigger: AATGAGGTGCTCAATCGGCAAATCCAAAAGGAGATC...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp CAGGAGCTGAGGAAAGGGTTGACATCCAGACAAATATATTACATGGATACTATGAGCTCCACCCGGATGTaGATAAGTTGGTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: QELRKGLTSRQIYYMDTMSSTRM*ISWFCR
Trigger: TCTGCAGAACCAACTTATCAACATCCGGGTGGAGCT...CATAGTATCCATGTAATATATTTGTCTGGATGTCAACCCTTTCCTCAGCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS-3UTR CAA 90 bp TACATCCCTGTTGCTTGTGAAAAGCGTCTGCCTTCTCTTCCTTCACTCTCTAAGTTTTGGATTTGCCGATaGAGCACCTCATTCTGGATA +
Preference number: 5 (lower is better)
Translates to: YIPVACEKRLPSLPSLSKFWICR*STSFWI
Trigger: TATCCAGAATGAGGTGCTCAATCGGCAAATCCAAAA...CTTAGAGAGTGAAGGAAGAGAAGGCAGACGCTTTTCACAAGCAACAGGGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS-3UTR CAA 90 bp TGTATGGTTTATTGTCTAACACTAGCAAACCAAATTGGCCCCAAATATGTGCATACCAAAGTCTCTTTCTaGACTTCAGGCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: CMVYCLTLANQIGPKYVHTKVSF*TSGLSG
Trigger: GCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGGT...ATGCACATATTTGGGGCCAATTTGGTTTGCTAGTGTTAGACAATAAACCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
CDS GCA 72 bp GCCTCTCAGGCCTGCGCTCGGCCTTCTCACAGCCCCTaGCGTCGCCCTCCCCTCGAGTCTTGGCCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: ASQACARPSHSP*RRPPLESWPQA
Trigger: AGCCTGAGGCCAAGACTCGAGGGGAGGGCGACGGCAGGGGCTGTGAGAAGGCCGAGCGCAGGCCTGAGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp GGACGGTGGGAGGAGATTCCAGGGGGACGTAGGCTTTaGGGAGGGGTGGCCGAGGTGGGCCAGGTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GRWEEIPGGRRL*GGVAEVGQVPH
Trigger: GTGAGGAACCTGGCCCACCTCGGCCACCCCTCCCCAAAGCCTACGTCCCCCTGGAATCTCCTCCCACCGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS TCA 72 bp AACCCTCGGGCCATCGGGGTAAGGGCTGCCAGGCTCTaGGGCTGTCTCAGGTCCAGACGGGAGGCCATTGGC +
Preference number: 6 (lower is better)
Translates to: NPRAIGVRAARL*GCLRSRREAIG
Trigger: GCCAATGGCCTCCCGTCTGGACCTGAGACAGCCTCAGAGCCTGGCAGCCCTTACCCCGATGGCCCGAGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 72 bp CACCTCCTGGAACCCTCGGGCCATCGGGGTAAGGGCTaGCAGGCTCTGAGGCTGTCTCAGGTCCAGACGGGA +
Preference number: 6 (lower is better)
Translates to: HLLEPSGHRGKG*QALRLSQVQTG
Trigger: TCCCGTCTGGACCTGAGACAGCCTCAGAGCCTGGCAGCCCTTACCCCGATGGCCCGAGGGTTCCAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp TCAGACCCGCATGGTATGGCTGCTGTCGGCGCCCCGTaGGCGGTCAGACGAGAGGGGGTTGACTGGTGGAGT +
Preference number: 6 (lower is better)
Translates to: SDPHGMAAVGAP*AVRREGVDWWS
Trigger: ACTCCACCAGTCAACCCCCTCTCGTCTGACCGCCCACGGGGCGCCGACAGCAGCCATACCATGCGGGTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 72 bp GGATCCAGGCCTCCTGCTCCTCGGGGCTCTCGGCACTaGAGAAGTAGGTGCGGACTCCAGCGTGCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: GSRPPAPRGSRH*RSRCGLQRALP
Trigger: AGGCAGAGCACGCTGGAGTCCGCACCTACTTCTTCAGTGCCGAGAGCCCCGAGGAGCAGGAGGCCTGGATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
CDS TCA 72 bp ATAGTCAGGGACCCGGCGGGGCATAGGGTAGAACCTTaGAGGGCTCCGAAGGTCTTCGGGTGGGGGCACCCC +
Preference number: 6 (lower is better)
Translates to: IVRDPAGHRVEP*RAPKVFGWGHP
Trigger: GGGGTGCCCCCACCCGAAGACCTTCGGAGCCCTTCAAGGTTCTACCCTATGCCCCGCCGGGTCCCTGACTAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp CTCCAGGGCCCAGGGTGGACTAATCCTATCGTAGGCTaGCATGGAGCAGATGCTGTCGGGCCGCACCCCTGG +
Preference number: 6 (lower is better)
Translates to: LQGPGWTNPIVG*HGADAVGPHPW
Trigger: CCAGGGGTGCGGCCCGACAGCATCTGCTCCATGCCAGCCTACGATAGGATTAGTCCACCCTGGGCCCTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 72 bp ACTGCGTGGTGGCAGCCGATCAAAACGGGCGCTAGGTaGGCGCACTGGGGAGTAGATGCGGGCACGGCTGTA +
Preference number: 6 (lower is better)
Translates to: TAWWQPIKTGAR*AHWGVDAGTAV
Trigger: TACAGCCGTGCCCGCATCTACTCCCCAGTGCGCTCACCTAGCGCCCGTTTTGATCGGCTGCCACCACGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 72 bp AGCCTCGCGATCTCCTCCCGTGGTGTCTCATATGCCTaGCCACCAGGTTCCTCGGCTCTCAGGGCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SLAISSRGVSYA*PPGSSALRAAS
Trigger: GGAGGCAGCCCTGAGAGCCGAGGAACCTGGTGGTCAGGCATATGAGACACCACGGGAGGAGATCGCGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp TCCCTGGTCGGCTTGGGGAGCTATACTGCCAGCCATTaGGCTGAGCAGGGTGTTCCCCACCTCCTGGAACCC +
Preference number: 6 (lower is better)
Translates to: SLVGLGSYTASH*AEQGVPHLLEP
Trigger: GGGTTCCAGGAGGTGGGGAACACCCTGCTCAGCCCAATGGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp CCAGCTCGTCATAAAAGACTGGCTGTCGGGAGGGGCTaGGGATCCAAACGGTGCCATCCTGCCGCCCGTAGC +
Preference number: 6 (lower is better)
Translates to: PARHKRLAVGRG*GSKRCHPAARS
Trigger: GCTACGGGCGGCAGGATGGCACCGTTTGGATCCCCAGCCCCTCCCGACAGCCAGTCTTTTATGACGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp GGGTGGCCGAGGTGGGCCAGGTTCCTCACTGGACCCTaGCTTAGTGGGAGAACCCTGAGAGCCAGACACCAT +
Preference number: 6 (lower is better)
Translates to: GWPRWARFLTGP*LSGRTLRARHH
Trigger: ATGGTGTCTGGCTCTCAGGGTTCTCCCACTAAGCCAGGGTCCAGTGAGGAACCTGGCCCACCTCGGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS CCA 72 bp CCCTTAGGCAAACCTGGGCCGGCAGAGTGTCCACTCTaGATGGGTGAGGCTGTACCAGGGTGCACCCAGCTG +
Preference number: 6 (lower is better)
Translates to: PLGKPGPAECPL*MGEAVPGCTQL
Trigger: CAGCTGGGTGCACCCTGGTACAGCCTCACCCATCCAGAGTGGACACTCTGCCGGCCCAGGTTTGCCTAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212252.2
CDS TCA 72 bp GAGAGGGCTGGCTGGGCTGTTGGAGCTGTAGGTGGCTaGCGGTCCAAGTCCTCCTCTGTGCTTGGCTGTGTC +
Preference number: 6 (lower is better)
Translates to: ERAGWAVGAVGG*RSKSSSVLGCV
Trigger: GACACAGCCAAGCACAGAGGAGGACTTGGACCGTCAGCCACCTACAGCTCCAACAGCCCAGCCAGCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp CCGGAAGGAGTGGCGCTTGTCCTCCAGGGCCCAGGGTaGACTAATCCTATCGTAGGCTGGCATGGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: PEGVALVLQGPG*TNPIVGWHGAD
Trigger: ATCTGCTCCATGCCAGCCTACGATAGGATTAGTCCACCCTGGGCCCTGGAGGACAAGCGCCACTCCTTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 90 bp TGCCGCCTCATCCGGTCCATCTGCTCCTCGACACTCATTTTCACCTaGCCCTCTCCAGAGAACACAGCACTCTTGGGGCGCTCCCGTGAG +
Preference number: 6 (lower is better)
Translates to: CRLIRSICSSTLIFT*PSPENTALLGRSRE
Trigger: CTCACGGGAGCGCCCCAAGAGTGCTGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGTCGAGGAGCAGATGGACCGGATGAGGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187285.7
CDS TCA 72 bp CACTCTTGGGGCGCTCCCGTGAGGAGAGGCCATTGGTaGGTCCATTCGTGGTCCTTCTCACCACTGCTGATG +
Preference number: 6 (lower is better)
Translates to: HSWGAPVRRGHW*VHSWSFSPLLM
Trigger: CATCAGCAGTGGTGAGAAGGACCACGAATGGACTCACCAATGGCCTCTCCTCACGGGAGCGCCCCAAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187285.7
CDS TCA 72 bp CTCTCCAGAGAACACAGCACTCTTGGGGCGCTCCCGTaGGGAGAGGCCATTGGTGAGTCCATTCGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: LSREHSTLGALP*GEAIGESIRGP
Trigger: AGGACCACGAATGGACTCACCAATGGCCTCTCCTCACGGGAGCGCCCCAAGAGTGCTGTGTTCTCTGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187285.7
CDS GCA 72 bp GAAGGTGTGGAGGCCATCCCGGAACACCTCTGGGTATaGAGGGACTTGCATGAAAAGGTGGGCCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: EGVEAIPEHLWV*RDLHEKVGPGR
Trigger: TCTCCCAGGGCCCACCTTTTCATGCAAGTCCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS GCA 72 bp ACGGTCCAAGTCCTCCTCTGTGCTTGGCTGTGTCAGTaGCCCGAGAGGGGTTGTTCTTCCTCAGCCCTTCCA +
Preference number: 6 (lower is better)
Translates to: TVQVLLCAWLCQ*PERGCSSSALP
Trigger: TGGAAGGGCTGAGGAAGAACAACCCCTCTCGGGGCACTGACACAGCCAAGCACAGAGGAGGACTTGGACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 72 bp CCCTCTCCAGAGAACACAGCACTCTTGGGGCGCTCTTaGCGTGAGGAGAGGCCATTGGTGAGTCCATTCGTG +
Preference number: 6 (lower is better)
Translates to: PSPENTALLGRS*REERPLVSPFV
Trigger: CACGAATGGACTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTCTGGAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS CCA 72 bp GGCTGGCATGGAGCAGATGCTGTCGGGCCGCACCCCTaGTGGGTAGTACTGGTAATCATCAGGATACTGGGA +
Preference number: 6 (lower is better)
Translates to: GWHGADAVGPHP*WVVLVIIRILG
Trigger: TCCCAGTATCCTGATGATTACCAGTACTACCCACCAGGGGTGCGGCCCGACAGCATCTGCTCCATGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 90 bp GAAGGTGTGGAGGCCATCCCGGAACACCTCTGGGTATGCAGGGACTaGCATGAAAAGGTGGGCCCTGGGAGAGGAGTTCTCCACCATTCG +
Preference number: 6 (lower is better)
Translates to: EGVEAIPEHLWVCRD*HEKVGPGRGVLHHS
Trigger: CGAATGGTGGAGAACTCCTCTCCCAGGGCCCACCTTTTCATGCAAGTCCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS CAA 90 bp TGCCGCCTCATCCGGTCCATCTGCTCCTCGACACTCATTTTCACCTaGCCCTCTCCAGAGAACACAGCACTCTTGGGGCGCTCTTGCCGT +
Preference number: 6 (lower is better)
Translates to: CRLIRSICSSTLIFT*PSPENTALLGRSCR
Trigger: ACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGTCGAGGAGCAGATGGACCGGATGAGGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS TCA 72 bp CTCTGCCTTAAACGTGTGCTTCCGACTGATGTTGTCTaGAGGCTGCACAGCCGCCACCCGGAAGCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: LCLKRVLPTDVV*RLHSRHPEAQQ
Trigger: CTGCTGAGCTTCCGGGTGGCGGCTGTGCAGCCTTCAGACAACATCAGTCGGAAGCACACGTTTAAGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038295.15
ENSMUST00000187285.7
ENSMUST00000212252.2
CDS TCA 72 bp TGGCTGCTGATGGTGTTTGCTGGGTGGGATGTTCTCTaGGTCTGGCTTCTCGAGGCTGTGACGCACAGGCTG +
Preference number: 6 (lower is better)
Translates to: WLLMVFAGWDVL*VWLLEAVTHRL
Trigger: CAGCCTGTGCGTCACAGCCTCGAGAAGCCAGACTCAGAGAACATCCCACCCAGCAAACACCATCAGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
CDS TCA 72 bp TCTTGGGGCGCTCTTGCCGTGAGGAGAGGCCATTGGTaGGTCCATTCGTGGTCCTTCTCACCACTGCTGATG +
Preference number: 6 (lower is better)
Translates to: SWGALAVRRGHW*VHSWSFSPLLM
Trigger: CATCAGCAGTGGTGAGAAGGACCACGAATGGACTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS TCA 72 bp TCCAGAGAACACAGCACTCTTGGGGCGCTCTTGCCGTaGGGAGAGGCCATTGGTGAGTCCATTCGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: SREHSTLGALLP*GEAIGESIRGP
Trigger: AGGACCACGAATGGACTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS TCA 72 bp TGTAGGCTCCTCCGCTTTTCCTTCATGGAACCGCTCTaGTGCCGCCTCATCCGGTCCATCTGCTCCTCGACA +
Preference number: 6 (lower is better)
Translates to: CRLLRFSFMEPL*CRLIRSICSST
Trigger: TGTCGAGGAGCAGATGGACCGGATGAGGCGGCATCAGAGCGGTTCCATGAAGGAAAAGCGGAGGAGCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 72 bp GGCCTGCTTATAGAGCCAGCCCGCCTTGGTAACAGGTaGATTGGGGTTCCGCTTCATGGAGTGTGCGCGTTT +
Preference number: 6 (lower is better)
Translates to: GLLIEPARLGNR*IGVPLHGVCAF
Trigger: AAACGCGCACACTCCATGAAGCGGAACCCCAATGCACCTGTTACCAAGGCGGGCTGGCTCTATAAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS GCA 72 bp GCTGATAGATCGCCTCATCACGTAGGCAGCGGGATCTaGATAGATGTCCTCACTGCGTGGTGGCAGCCGATC +
Preference number: 6 (lower is better)
Translates to: ADRSPHHVGSGI*IDVLTAWWQPI
Trigger: GATCGGCTGCCACCACGCAGTGAGGACATCTATGCAGATCCCGCTGCCTACGTGATGAGGCGATCTATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000187299.2
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS GCA 72 bp GGGTACCCAGGGGTGATGTCTGGCTCGGGTCTTTCTTaGTTGTCTCATAGCCTGTTTTGGGCTGGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: GYPGVMSGSGLS*LSHSLFWAGPW
Trigger: CCAAGGGCCAGCCCAAAACAGGCTATGAGACAAGCAAGAAAGACCCGAGCCAGACATCACCCCTGGGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS CCA 72 bp TCGGGAAGTTCGAGTCGCCCGGATGTTGGGCCGCTCTaGAGGAACCTCAGACACCATGTTGTGGTTGGCTAT +
Preference number: 6 (lower is better)
Translates to: SGSSSRPDVGPL*RNLRHHVVVGY
Trigger: ATAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTCGAACTTCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 72 bp ATCATGAGGTGGAAAAGCTGTGCTCCCTGGTCGGCTTaGGGAGCTATACTGCCAGCCATTGGGCTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: IMRWKSCAPWSA*GAILPAIGLSR
Trigger: CCTGCTCAGCCCAATGGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGAGCACAGCTTTTCCACCTCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp TGGCATGGAGCAGATGCTGTCGGGCCGCACCCCTGGTaGGTAGTACTGGTAATCATCAGGATACTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: WHGADAVGPHPW*VVLVIIRILGG
Trigger: TCCTCCCAGTATCCTGATGATTACCAGTACTACCCACCAGGGGTGCGGCCCGACAGCATCTGCTCCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp CCTCCGATTCGAGGTTCTCATACACCACTGTACTGTTaGTCAGTGCCGTGGTCGCCTGTGACAGCTCCACCC +
Preference number: 6 (lower is better)
Translates to: PPIRGSHTPLYC*SVPWSPVTAPP
Trigger: GGGTGGAGCTGTCACAGGCGACCACGGCACTGACCAACAGTACAGTGGTGTATGAGAACCTCGAATCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS CCA 72 bp GGCTCGGGTCTTTCTTGCTTGTCTCATAGCCTGTTTTaGGCTGGCCCTTGGCTGTCTCGCCACTTCGATGCC +
Preference number: 6 (lower is better)
Translates to: GSGLSCLSHSLF*AGPWLSRHFDA
Trigger: GGCATCGAAGTGGCGAGACAGCCAAGGGCCAGCCCAAAACAGGCTATGAGACAAGCAAGAAAGACCCGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS CAA 72 bp GCAATGGCTTTTCGGGAAGTTCGAGTCGCCCGGATGTaGGGCCGCTCTGGAGGAACCTCAGACACCATGTTG +
Preference number: 6 (lower is better)
Translates to: AMAFREVRVARM*GRSGGTSDTML
Trigger: CAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTCGAACTTCCCGAAAAGCCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CAA 72 bp CATCATGAGGTGGAAAAGCTGTGCTCCCTGGTCGGCTaGGGGAGCTATACTGCCAGCCATTGGGCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: HHEVEKLCSLVG*GSYTASHWAEQ
Trigger: CTGCTCAGCCCAATGGCTGGCAGTATAGCTCCCCAAGCCGACCAGGGAGCACAGCTTTTCCACCTCATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 90 bp GTCGCCCGGATGTTGGGCCGCTCTGGAGGAACCTCAGACACCATGTaGTGGTTGGCTATGTCGCTGTTGATGGTAGCAGAACGTTTCCCA +
Preference number: 6 (lower is better)
Translates to: VARMLGRSGGTSDTM*WLAMSLLMVAERFP
Trigger: TGGGAAACGTTCTGCTACCATCAACAGCGACATAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATCCGGGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CAA 90 bp TCACACAGCTTGCCCAGCAGCTTATCCGTGTCTTGCTCGTTTAGCTaGAAGGTGTGGAGGCCATCCCGGAACACCTCTGGGTATGCAGGG +
Preference number: 6 (lower is better)
Translates to: SHSLPSSLSVSCSFS*KVWRPSRNTSGYAG
Trigger: CCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCAAGCTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000187299.2
ENSMUST00000190186.7
CDS CAA 90 bp TCGACACTCATTTTCACCTTGCCCTCTCCAGAGAACACAGCACTCTaGGGGCGCTCCCGTGAGGAGAGGCCATTGGTGAGTCCATTCGTG +
Preference number: 6 (lower is better)
Translates to: STLIFTLPSPENTAL*GRSREERPLVSPFV
Trigger: CACGAATGGACTCACCAATGGCCTCTCCTCACGGGAGCGCCCCAAGAGTGCTGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187285.7
CDS TCA 72 bp TGCCCAGCAGCTTATCCGTGTCTTGCTCGTTTAGCTTaGAGGTGTGGAGGCCATCCCGGAACACCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: CPAAYPCLARLA*RCGGHPGTPLG
Trigger: ACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000187299.2
ENSMUST00000190186.7
CDS TCA 72 bp TGGCTTAGTGGGAGAACCCTGAGAGCCAGACACCATTaGAAAGGGGCTCAGGGGACTGGTAAGGCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: WLSGRTLRARHH*KGAQGTGKAGR
Trigger: TCTGCCAGCCTTACCAGTCCCCTGAGCCCCTTTTCAATGGTGTCTGGCTCTCAGGGTTCTCCCACTAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS TCA 72 bp AGTCACCTTAAACGTGTGCTTCCGACTGATGTTGTCTaGAGGCTGCACAGCCGCCACCCGGAAGCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: SHLKRVLPTDVV*RLHSRHPEAQQ
Trigger: CTGCTGAGCTTCCGGGTGGCGGCTGTGCAGCCTTCAGACAACATCAGTCGGAAGCACACGTTTAAGGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS TCA 72 bp GTATGCAGGGACCATCTTATCGTGGACCGTGGGGGATaGTGGGTAGTTGTAGGGGAACAGTCCTGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: VCRDHLIVDRGG*WVVVGEQSCRD
Trigger: GTCCCTGCAGGACTGTTCCCCTACAACTACCCATCATCCCCCACGGTCCACGATAAGATGGTCCCTGCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190186.7
CDS GCA 72 bp TGCTCACACAGCTTGCCCAGCAGCTTATCCGTGTCTTaGTCGTTTAGCTTGAAGGTGTGGAGGCCATCCCGG +
Preference number: 6 (lower is better)
Translates to: CSHSLPSSLSVS*SFSLKVWRPSR
Trigger: CCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCAAGCTGTGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000187299.2
ENSMUST00000190186.7
CDS GCA 72 bp GGGTACCCAGGGGTGATGTCTGGCTCGGGTCTTTCTTaGTTGTCTCATAGCCTGTTTTGGGCTCACTGGACC +
Preference number: 6 (lower is better)
Translates to: GYPGVMSGSGLS*LSHSLFWAHWT
Trigger: GGTCCAGTGAGCCCAAAACAGGCTATGAGACAAGCAAGAAAGACCCGAGCCAGACATCACCCCTGGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp CAATGGCTTTTCGGGAAGTTCGAGTCGCCCGGATGTTaGGCCGCTCTGGAGGAACCTCAGACACCATGTTGT +
Preference number: 6 (lower is better)
Translates to: QWLFGKFESPGC*AALEEPQTPCC
Trigger: ACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTCGAACTTCCCGAAAAGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 72 bp TCTTGCTTGTCTCATAGCCTGTTTTGGGCTGGCCCTTaGCTGTCTCGCCACTTCGATGCCAGGAAGGGGAGT +
Preference number: 6 (lower is better)
Translates to: SCLSHSLFWAGP*LSRHFDARKGS
Trigger: ACTCCCCTTCCTGGCATCGAAGTGGCGAGACAGCCAAGGGCCAGCCCAAAACAGGCTATGAGACAAGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS CAA 72 bp GACGGGAGGCCATTGGCTTTTACCAAAGTCTCTTTCTaGACTTCAGGCCTCTCAGGCCTGCGCTCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: DGRPLAFTKVSF*TSGLSGLRSAF
Trigger: GAAGGCCGAGCGCAGGCCTGAGAGGCCTGAAGTCAAGAAAGAGACTTTGGTAAAAGCCAATGGCCTCCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 72 bp TTGCCCAGCAGCTTATCCGTGTCTTGCTCGTTTAGCTaGAAGGTGTGGAGGCCATCCCGGAACACCTCTGGG +
Preference number: 6 (lower is better)
Translates to: LPSSLSVSCSFS*KVWRPSRNTSG
Trigger: CCCAGAGGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000187299.2
ENSMUST00000190186.7
CDS CAA 72 bp AGCTGCTGCACCAGCCGCTCCTGTTCCCTTACTACCTaGTTCTGCTCACACAGCTTGCCCAGCAGCTTATCC +
Preference number: 6 (lower is better)
Translates to: SCCTSRSCSLTT*FCSHSLPSSLS
Trigger: GGATAAGCTGCTGGGCAAGCTGTGTGAGCAGAACAAGGTAGTAAGGGAACAGGAGCGGCTGGTGCAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 72 bp ACCTCCGATTCGAGGTTCTCATACACCACTGTACTGTaGGTCAGTGCCGTGGTCGCCTGTGACAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: TSDSRFSYTTVL*VSAVVACDSST
Trigger: GGTGGAGCTGTCACAGGCGACCACGGCACTGACCAACAGTACAGTGGTGTATGAGAACCTCGAATCGGAGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS CAA 72 bp TACCCAGGGGTGATGTCTGGCTCGGGTCTTTCTTGCTaGTCTCATAGCCTGTTTTGGGCTGGCCCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: YPGVMSGSGLSC*SHSLFWAGPWL
Trigger: CAGCCAAGGGCCAGCCCAAAACAGGCTATGAGACAAGCAAGAAAGACCCGAGCCAGACATCACCCCTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15
CDS CAA 90 bp TTACCAAAGGCAATGGCTTTTCGGGAAGTTCGAGTCGCCCGGATGTaGGGCCGCTCTGGAGGAACCTCAGACACCATGTTGTGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: LPKAMAFREVRVARM*GRSGGTSDTMLWLA
Trigger: AGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATCCGGGCGACTCGAACTTCCCGAAAAGCCATTGCCTTTGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CAA 90 bp TCGACACTCATTTTCACCTTGCCCTCTCCAGAGAACACAGCACTCTaGGGGCGCTCTTGCCGTGAGGAGAGGCCATTGGTGAGTCCATTC +
Preference number: 6 (lower is better)
Translates to: STLIFTLPSPENTAL*GRSCREERPLVSPF
Trigger: GAATGGACTCACCAATGGCCTCTCCTCACGGCAAGAGCGCCCCAAGAGTGCTGTGTTCTCTGGAGAGGGCAAGGTGAAAATGAGTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000190186.7
CDS GCA 72 bp ATATGCCTGACCACCAGGTTCCTCGGCTCTCAGGGCTaGCTCCAGGTTGGAGATGTCTACTTCATGGATGCT +
Preference number: 6 (lower is better)
Translates to: ICLTTRFLGSQG*LQVGDVYFMDA
Trigger: AGCATCCATGAAGTAGACATCTCCAACCTGGAGGCAGCCCTGAGAGCCGAGGAACCTGGTGGTCAGGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 72 bp GAGTGTCCACTCTGGATGGGTGAGGCTGTACCAGGGTaGACCCAGCTGGTTGACTTCTCCTCATCATTGATG +
Preference number: 6 (lower is better)
Translates to: ECPLWMGEAVPG*TQLVDFSSSLM
Trigger: CATCAATGATGAGGAGAAGTCAACCAGCTGGGTGCACCCTGGTACAGCCTCACCCATCCAGAGTGGACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212252.2
CDS CCA 72 bp TCCGCTTCATGGAGTGTGCGCGTTTACCAAAGGCAATaGCTTTTCGGGAAGTTCGAGTCGCCCGGATGTTGG +
Preference number: 6 (lower is better)
Translates to: SASWSVRVYQRQ*LFGKFESPGCW
Trigger: CCAACATCCGGGCGACTCGAACTTCCCGAAAAGCCATTGCCTTTGGTAAACGCGCACACTCCATGAAGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 72 bp AGCTTATCCGTGTCTTGCTCGTTTAGCTTGAAGGTGTaGAGGCCATCCCGGAACACCTCTGGGTATGCAGGG +
Preference number: 6 (lower is better)
Translates to: SLSVSCSFSLKV*RPSRNTSGYAG
Trigger: CCCTGCATACCCAGAGGTGTTCCGGGATGGCCTCCACACCTTCAAGCTAAACGAGCAAGACACGGATAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000187299.2
ENSMUST00000190186.7
CDS CCA 72 bp GCTTGTCTCATAGCCTGTTTTGGGCTCACTGGACCCTaGCTTAGTGGGAGAACCCTGAGAGCCAGACACCAT +
Preference number: 6 (lower is better)
Translates to: ACLIACFGLTGP*LSGRTLRARHH
Trigger: ATGGTGTCTGGCTCTCAGGGTTCTCCCACTAAGCCAGGGTCCAGTGAGCCCAAAACAGGCTATGAGACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 72 bp TTCTCTGCCTCCACCTCTTGTCTGGTGGGTACCAGGTaGATATCTCTAGGGGTACCCAGGGGTGATGTCTGG +
Preference number: 6 (lower is better)
Translates to: FSASTSCLVGTR*ISLGVPRGDVW
Trigger: CCAGACATCACCCCTGGGTACCCCTAGAGATATCAACCTGGTACCCACCAGACAAGAGGTGGAGGCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 72 bp TACCCAGGGGTGATGTCTGGCTCGGGTCTTTCTTGCTaGTCTCATAGCCTGTTTTGGGCTCACTGGACCCTG +
Preference number: 6 (lower is better)
Translates to: YPGVMSGSGLSC*SHSLFWAHWTL
Trigger: CAGGGTCCAGTGAGCCCAAAACAGGCTATGAGACAAGCAAGAAAGACCCGAGCCAGACATCACCCCTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 90 bp CGGATGTTGGGCCGCTCTGGAGGAACCTCAGACACCATGTTGTGGTaGGCTATGTCGCTGTTGATGGTAGCAGAACGTTTCCCACCTGTT +
Preference number: 6 (lower is better)
Translates to: RMLGRSGGTSDTMLW*AMSLLMVAERFPPV
Trigger: AACAGGTGGGAAACGTTCTGCTACCATCAACAGCGACATAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS TCA 72 bp CAGTGCGTAGAACTGGCCCCAGCCTCATCTACCCAGTaGACAGTCACCTTAAACGTGTGCTTCCGACTGATG +
Preference number: 6 (lower is better)
Translates to: QCVELAPASSTQ*TVTLNVCFRLM
Trigger: CATCAGTCGGAAGCACACGTTTAAGGTGACTGTTCACTGGGTAGATGAGGCTGGGGCCAGTTCTACGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105082.9
ENSMUST00000186917.7
CDS GCA 72 bp CGATTGAGCACCTCATTCTGGATATCCAAGTTGAGCTaGTCCCAGAGTTCGTCATGCAGGGCAGAGACCTCC +
Preference number: 6 (lower is better)
Translates to: RLSTSFWISKLS*SQSSSCRAETS
Trigger: GGAGGTCTCTGCCCTGCATGACGAACTCTGGGAGCAGCTCAACTTGGATATCCAGAATGAGGTGCTCAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS CCA 72 bp TTGGGCCGCTCTGGAGGAACCTCAGACACCATGTTGTaGTTGGCTATGTCGCTGTTGATGGTAGCAGAACGT +
Preference number: 6 (lower is better)
Translates to: LGRSGGTSDTML*LAMSLLMVAER
Trigger: ACGTTCTGCTACCATCAACAGCGACATAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 72 bp GTCGCCTGTGACAGCTCCACCCGGATGTTGATAAGTTaGTTCTGCAGAGACTCCTTCTTGTGCAGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: VACDSSTRMLIS*FCRDSFLCSSF
Trigger: GAAGCTGCTGCACAAGAAGGAGTCTCTGCAGAACCAACTTATCAACATCCGGGTGGAGCTGTCACAGGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS CAA 72 bp GGCCGCTCTGGAGGAACCTCAGACACCATGTTGTGGTaGGCTATGTCGCTGTTGATGGTAGCAGAACGTTTC +
Preference number: 6 (lower is better)
Translates to: GRSGGTSDTMLW*AMSLLMVAERF
Trigger: GAAACGTTCTGCTACCATCAACAGCGACATAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CAA 72 bp GGCTCTGAGGCTGTCTCAGGTCCAGACGGGAGGCCATaGGCTTTTACCAAAGTCTCTTTCTTGACTTCAGGC +
Preference number: 6 (lower is better)
Translates to: GSEAVSGPDGRP*AFTKVSFLTSG
Trigger: GCCTGAAGTCAAGAAAGAGACTTTGGTAAAAGCCAATGGCCTCCCGTCTGGACCTGAGACAGCCTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 72 bp TCTGGGATCTGGCCAGTCACTGGATGTCGAAATGTGTaGCGTCTTTCATTGTGGCTGACCCGTCGATCAGCC +
Preference number: 6 (lower is better)
Translates to: SGIWPVTGCRNV*RLSLWLTRRSA
Trigger: GGCTGATCGACGGGTCAGCCACAATGAAAGACGCAACACATTTCGACATCCAGTGACTGGCCAGATCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239123.2
CDS TCA 72 bp GGGTACCAGGTTGATATCTCTAGGGGTACCCAGGGGTaGTGTCTGGCTCGGGTCTTTCTTGCTTGTCTCATA +
Preference number: 6 (lower is better)
Translates to: GYQVDISRGTQG*CLARVFLACLI
Trigger: TATGAGACAAGCAAGAAAGACCCGAGCCAGACATCACCCCTGGGTACCCCTAGAGATATCAACCTGGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 72 bp GGTAACAGGTGCATTGGGGTTCCGCTTCATGGAGTGTaGGCGTTTACCAAAGGCAATGGCTTTTCGGGAAGT +
Preference number: 6 (lower is better)
Translates to: GNRCIGVPLHGV*AFTKGNGFSGS
Trigger: ACTTCCCGAAAAGCCATTGCCTTTGGTAAACGCGCACACTCCATGAAGCGGAACCCCAATGCACCTGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS GCA 72 bp TGGATATCCAAGTTGAGCTGCTCCCAGAGTTCGTCATaGAGGGCAGAGACCTCCGATTCGAGGTTCTCATAC +
Preference number: 6 (lower is better)
Translates to: WISKLSCSQSSS*RAETSDSRFSY
Trigger: GTATGAGAACCTCGAATCGGAGGTCTCTGCCCTGCATGACGAACTCTGGGAGCAGCTCAACTTGGATATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS CAA 72 bp ATGTTGGGCCGCTCTGGAGGAACCTCAGACACCATGTaGTGGTTGGCTATGTCGCTGTTGATGGTAGCAGAA +
Preference number: 6 (lower is better)
Translates to: MLGRSGGTSDTM*WLAMSLLMVAE
Trigger: TTCTGCTACCATCAACAGCGACATAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGAGCGGCCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS TCA 72 bp ATTGGTGAGTCCATTCGTGGTCCTTCTCACCACTGCTaGTGGTGTCAACTCCTCCTCAGCAGGAGATTTGGT +
Preference number: 6 (lower is better)
Translates to: IGESIRGPSHHC*WCQLLLSRRFG
Trigger: ACCAAATCTCCTGCTGAGGAGGAGTTGACACCATCAGCAGTGGTGAGAAGGACCACGAATGGACTCACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS GCA 72 bp CCTGTTCCCTTACTACCTTGTTCTGCTCACACAGCTTaGCCAGCAGCTTATCCGTGTCTTGCTCGTTTAGCT +
Preference number: 6 (lower is better)
Translates to: PVPLLPCSAHTA*PAAYPCLARLA
Trigger: AGCTAAACGAGCAAGACACGGATAAGCTGCTGGGCAAGCTGTGTGAGCAGAACAAGGTAGTAAGGGAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 72 bp ACTGCTGATGGTGTCAACTCCTCCTCAGCAGGAGATTaGGTCCGAGGGGGTACAATGCCAACTTTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: TADGVNSSSAGD*VRGGTMPTLLR
Trigger: TCTCAACAAAGTTGGCATTGTACCCCCTCGGACCAAATCTCCTGCTGAGGAGGAGTTGACACCATCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 90 bp TTGTTCTCCTCTGGGATCTGGCCAGTCACTGGATGTCGAAATGTGTaGCGTCTTTCATTGTGGTTGATGAAGTATGCAGCTCCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: LFSSGIWPVTGCRNV*RLSLWLMKYAAPSG
Trigger: CCCGGAAGGAGCTGCATACTTCATCAACCACAATGAAAGACGCAACACATTTCGACATCCAGTGACTGGCCAGATCCCAGAGGAGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212252.2
CDS CAA 90 bp TCTGGAGGAACCTCAGACACCATGTTGTGGTTGGCTATGTCGCTGTaGATGGTAGCAGAACGTTTCCCACCTGTTTTGTTGGACATGTCC +
Preference number: 6 (lower is better)
Translates to: SGGTSDTMLWLAMSL*MVAERFPPVLLDMS
Trigger: GGACATGTCCAACAAAACAGGTGGGAAACGTTCTGCTACCATCAACAGCGACATAGCCAACCACAACATGGTGTCTGAGGTTCCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CAA 72 bp GGTTCCAGGTCAATGTACCGTTCAGGGATGAGGACTTaGTCTGGAGTAGAGAGCTCCTTACTGATGTCCACA +
Preference number: 6 (lower is better)
Translates to: GSRSMYRSGMRT*SGVESSLLMST
Trigger: TGTGGACATCAGTAAGGAGCTCTCTACTCCAGACAAAGTCCTCATCCCTGAACGGTACATTGACCTGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CCA 72 bp CCTTCCATCACATCCTGGATCCTCCAGATCTCCTTTTaGATTTGCCGATTGAGCACCTCATTCTGGATATCC +
Preference number: 6 (lower is better)
Translates to: PSITSWILQISF*ICRLSTSFWIS
Trigger: GGATATCCAGAATGAGGTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAGGATCCAGGATGTGATGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS CCA 72 bp CAGGTCAATGTACCGTTCAGGGATGAGGACTTTGTCTaGAGTAGAGAGCTCCTTACTGATGTCCACATCGTA +
Preference number: 6 (lower is better)
Translates to: QVNVPFRDEDFV*SRELLTDVHIV
Trigger: TACGATGTGGACATCAGTAAGGAGCTCTCTACTCCAGACAAAGTCCTCATCCCTGAACGGTACATTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000190186.7
CDS CAA 72 bp ACCTCAGACACCATGTTGTGGTTGGCTATGTCGCTGTaGATGGTAGCAGAACGTTTCCCACCTGTTTTGTTG +
Preference number: 6 (lower is better)
Translates to: TSDTMLWLAMSL*MVAERFPPVLL
Trigger: CAACAAAACAGGTGGGAAACGTTCTGCTACCATCAACAGCGACATAGCCAACCACAACATGGTGTCTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CAA 72 bp TCCTGGATCCTCCAGATCTCCTTTTGGATTTGCCGATaGAGCACCTCATTCTGGATATCCAAGTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SWILQISFWICR*STSFWISKLSC
Trigger: GCAGCTCAACTTGGATATCCAGAATGAGGTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAGGATCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS GCA 72 bp AAATGTGTTGCGTCTTTCATTGTGGTTGATGAAGTATaGAGCTCCTTCCGGGGTAGAATCCATCTCCCAACC +
Preference number: 6 (lower is better)
Translates to: KCVASFIVVDEV*SSFRGRIHLPT
Trigger: GGTTGGGAGATGGATTCTACCCCGGAAGGAGCTGCATACTTCATCAACCACAATGAAAGACGCAACACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212252.2
CDS GCA 72 bp ATCACATCCTGGATCCTCCAGATCTCCTTTTGGATTTaGCGATTGAGCACCTCATTCTGGATATCCAAGTTG +
Preference number: 6 (lower is better)
Translates to: ITSWILQISFWI*RLSTSFWISKL
Trigger: CAACTTGGATATCCAGAATGAGGTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAGGATCCAGGATGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS CCA 72 bp GGCCGATGTTTTCAAGTCAAACTTTTTGTTCTCCTCTaGGATCTGGCCAGTCACTGGATGTCGAAATGTGTT +
Preference number: 6 (lower is better)
Translates to: GRCFQVKLFVLL*DLASHWMSKCV
Trigger: AACACATTTCGACATCCAGTGACTGGCCAGATCCCAGAGGAGAACAAAAAGTTTGACTTGAAAACATCGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 72 bp AAACTTTTTGTTCTCCTCTGGGATCTGGCCAGTCACTaGATGTCGAAATGTGTTGCGTCTTTCATTGTGGCT +
Preference number: 6 (lower is better)
Translates to: KLFVLLWDLASH*MSKCVASFIVA
Trigger: AGCCACAATGAAAGACGCAACACATTTCGACATCCAGTGACTGGCCAGATCCCAGAGGAGAACAAAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239123.2
CDS CAA 72 bp CATCACATCCTGGATCCTCCAGATCTCCTTTTGGATTaGCCGATTGAGCACCTCATTCTGGATATCCAAGTT +
Preference number: 6 (lower is better)
Translates to: HHILDPPDLLLD*PIEHLILDIQV
Trigger: AACTTGGATATCCAGAATGAGGTGCTCAATCGGCAAATCCAAAAGGAGATCTGGAGGATCCAGGATGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000038295.15
ENSMUST00000105082.9
ENSMUST00000186917.7
ENSMUST00000187285.7
ENSMUST00000189598.2
ENSMUST00000190186.7
CDS CAA 90 bp TTGGCTATGTCGCTGTTGATGGTAGCAGAACGTTTCCCACCTGTTTaGTTGGACATGTCCAAGGCCGATGTTTTCAAGTCAAACTTTTTG +
Preference number: 6 (lower is better)
Translates to: LAMSLLMVAERFPPV*LDMSKADVFKSNFL
Trigger: CAAAAAGTTTGACTTGAAAACATCGGCCTTGGACATGTCCAACAAAACAGGTGGGAAACGTTCTGCTACCATCAACAGCGACATAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212252.2
ENSMUST00000239123.2
CDS CCA 72 bp AAACTTTTTGTTCTCCTCTGGGATCTGGCCAGTCACTaGATGTCGAAATGTGTTGCGTCTTTCATTGTGGTT +
Preference number: 6 (lower is better)
Translates to: KLFVLLWDLASH*MSKCVASFIVV
Trigger: AACCACAATGAAAGACGCAACACATTTCGACATCCAGTGACTGGCCAGATCCCAGAGGAGAACAAAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212252.2
CDS TCA 72 bp ACCTGCTGGTCCAAATACTCTAGGTTTCTTTGCAACTaGAGATCTAACAGTTCATCCATCTTATCGTGGACC +
Preference number: 6 (lower is better)
Translates to: TCWSKYSRFLCN*RSNSSSILSWT
Trigger: GGTCCACGATAAGATGGATGAACTGTTAGATCTTCAGTTGCAAAGAAACCTAGAGTATTTGGACCAGCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187299.2
CDS TCA 72 bp ATCTGCTGGTCCAAATACTCTAGGTTTCTTTGCAACTaGAGATCTAACAGTTCATCCATCTTATCGTGGACC +
Preference number: 6 (lower is better)
Translates to: ICWSKYSRFLCN*RSNSSSILSWT
Trigger: GGTCCACGATAAGATGGATGAACTGTTAGATCTTCAGTTGCAAAGAAACCTAGAGTATTTGGACCAGCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038295.15