Pregenerated sensors for PLEKHA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031557Ensembl transcript IDs: ENSMUST00000064883.14, ENSMUST00000098866.11, ENSMUST00000125466.2, ENSMUST00000128715.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCAGGAGGTGTTTCACGGCTCAAACACTGGCTCAAACGGGGCATaGCACACCTTCATAAACAGAGGGCCCAGCAGTCACACTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LQEVFHGSNTGSNGA*HTFINRGPSSHTVC Trigger: ACACACAGTGTGACTGCTGGGCCCTCTGTTTATGAAGGTGTGGCATGCCCCGTTTGAGCCAGTGTTTGAGCCGTGAAACACCTCCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR GCA 90 bp | GCTAGAGTTCCACCTGGTGTGTGCATGACTTCATTTAACAGGCAGTaGAATAAAGCAAAGAGCAAGTGGGCCAGCAGGCTGCACAGTATA | + |
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Preference number: 1 (lower is better) Translates to: ARVPPGVCMTSFNRQ*NKAKSKWASRLHSI Trigger: TATACTGTGCAGCCTGCTGGCCCACTTGCTCTTTGCTTTATTGCACTGCCTGTTAAATGAAGTCATGCACACACCAGGTGGAACTCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR GCA 90 bp | CAGTGTGGCACCAGATTCAGGGTCACAGTCACATTTGAAAGAGCATaGTTCCTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGC | + |
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Preference number: 1 (lower is better) Translates to: QCGTRFRVTVTFERA*FLSPGELYACFCFC Trigger: GCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAGGAAGCATGCTCTTTCAAATGTGACTGTGACCCTGAATCTGGTGCCACACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR TCA 90 bp | TCTAAGAGAGGGACAGACAGATTTTGCAATTTAAACGCCAAAAGATaGCCTCATTTCCTTGAGCCAGGGCATGTTCGAGGCCCTTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SKRGTDRFCNLNAKR*PHFLEPGHVRGPSG Trigger: TCCTGAAGGGCCTCGAACATGCCCTGGCTCAAGGAAATGAGGTCATCTTTTGGCGTTTAAATTGCAAAATCTGTCTGTCCCTCTCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR GCA 90 bp | GAAAGAGCATGCTTCCTCTCACCCGGAGAGCTTTATGCCTGTTTTTaGTTTTGCATTAACTATGGACACAGAGTGCTAACTAGCTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: ERACFLSPGELYACF*FCINYGHRVLTSLN Trigger: ATTTAAGCTAGTTAGCACTCTGTGTCCATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAGGAAGCATGCTCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR GCA 90 bp | TTAAACAGGCGACATGGGAAGCCTAATTTCAAAAACACTGCCGTCTaGTACCAGATAGCTGTTTATTTGGTTGACACTGAAAACAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: LNRRHGKPNFKNTAV*YQIAVYLVDTENKY Trigger: ATACTTGTTTTCAGTGTCAACCAAATAAACAGCTATCTGGTAGCAGACGGCAGTGTTTTTGAAATTAGGCTTCCCATGTCGCCTGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR TCA 90 bp | ATCCACAATCTATGCTTAACCACAAACCCACACGCCATCACACCTTaGAAACTAAAGGTTTATGCACCATCTTTGGCTCACATTAAAATA | + |
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Preference number: 1 (lower is better) Translates to: IHNLCLTTNPHAITP*KLKVYAPSLAHIKI Trigger: TATTTTAATGTGAGCCAAAGATGGTGCATAAACCTTTAGTTTTCAAGGTGTGATGGCGTGTGGGTTTGTGGTTAAGCATAGATTGTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR CCA 90 bp | AGGAATTCAAGATTCACTGTGCCAAGAAAGAGTCATTCTCCTGTCTaGAAAACATGGATCAAAGATGCTTATTGCAATAAACAACCATCC | + |
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Preference number: 1 (lower is better) Translates to: RNSRFTVPRKSHSPV*KTWIKDAYCNKQPS Trigger: GGATGGTTGTTTATTGCAATAAGCATCTTTGATCCATGTTTTCCAGACAGGAGAATGACTCTTTCTTGGCACAGTGAATCTTGAATTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR TCA 90 bp | TACTTTTCCTTTGTTTGCATAATATACACCGCATTGTGTTTAACATaGTCTCAGAGTGTGTACCGAAACCTCTCAACTTTCTGTAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: YFSFVCIIYTALCLT*SQSVYRNLSTFCKD Trigger: GTCCTTACAGAAAGTTGAGAGGTTTCGGTACACACTCTGAGATCATGTTAAACACAATGCGGTGTATATTATGCAAACAAAGGAAAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR TCA 90 bp | CACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTCTCCCTGGGAGGTATCCTaGAAGAACTGCCTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HKARQSRGTAPTHGAQKSPWEVS*KNCLGE Trigger: CTCCCCCAGGCAGTTCTTTCAGGATACCTCCCAGGG...AGACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTCTGGTAGCACAGTTCATTaGAGGCTGATAGAAATGACC | + |
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Preference number: 2 (lower is better) Translates to: HKARQSRGTAPTHGAQKSGSTVH*RLIEMT Trigger: GGTCATTTCTATCAGCCTTCAATGAACTGTGCTACC...AGACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTCTGGAAACCTGGGGAAATaGGGACATTCAAGAGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: HKARQSRGTAPTHGAQKSGNLGK*GHSRGN Trigger: ATTACCTCTTGAATGTCCCCATTTCCCCAGGTTTCC...AGACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR GCA 90 bp | CACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTCTCTGGAAATAGTATCTTaGCCAGTGGAAAAGCCATAC | + |
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Preference number: 2 (lower is better) Translates to: HKARQSRGTAPTHGAQKSLEIVS*PVEKPY Trigger: GTATGGCTTTTCCACTGGGCAAGATACTATTTCCAG...AGACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR TCA 90 bp | ATCACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTGAGATTGTCCTAACATaGGTGGTTTTCTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ITRPDKVGGQLPHTEPRSEIVLT*VVFSLS Trigger: AGAGAGAGAGAAAACCACTCATGTTAGGACAATCTC...ACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR GCA 90 bp | ATCACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTACCCGGAGAGCTTTATaGCTGTTTTTGCTTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: ITRPDKVGGQLPHTEPRSTRRAL*LFLLLH Trigger: ATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGT...ACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCCTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATCGAGCCCCTCCACTGTaGGTGCCATTAGACTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: CFLSPGELYACFCFCINYRAPPL*VPLDSV Trigger: GACAGAGTCTAATGGCACTCACAGTGGAGGGGCTCG...ATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAGGAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR TCA 90 bp | GAGATATCCCAAAAATTCACCTTTCACTCCCCAGACTCTTACGACCGCTCTCAGGGAAAAGCTTATGGGTaGAACTGGACTCTAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: EISQKFTFHSPDSYDRSQGKAYG*NWTLAS Trigger: GGAGGCTAGAGTCCAGTTTCACCCATAAGCTTTTCC...CTGAGAGCGGTCGTAAGAGTCTGGGGAGTGAAAGGTGAATTTTTGGGATATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGGCAGCCTTCTACTTGGAAGTAGAGCTGTCACTCCGCCACTTTGACCAGTCATTTAACAGGCAGTaGAATAAAGCAAAGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: GGAAFYLEVELSLRHFDQSFNRQ*NKAKSK Trigger: CTTGCTCTTTGCTTTATTGCACTGCCTGTTAAATGA...CTGGTCAAAGTGGCGGAGTGACAGCTCTACTTCCAAGTAGAAGGCTGCCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGAGGCTGAGGCAGGAGGATTATCAGTTCAAAGCCAGCCTGGACTCCGTAGTCATTCTCCTGTCTaGAAAACATGGATCAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: TQEAEAGGLSVQSQPGLRSHSPV*KTWIKD Trigger: ATCTTTGATCCATGTTTTCCAGACAGGAGAATGACT...ACGGAGTCCAGGCTGGCTTTGAACTGATAATCCTCCTGCCTCAGCCTCCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR TCA 90 bp | GACATGATTCCTACAAGTGGTTATAGCAGTTTAATTAGCCCTCATGACTCACAACGAGCCCCTCCACTGTaGGTGCCATTAGACTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: DMIPTSGYSSLISPHDSQRAPPL*VPLDSV Trigger: GACAGAGTCTAATGGCACTCACAGTGGAGGGGCTCG...TTGTGAGTCATGAGGGCTAATTAAACTGCTATAACCACTTGTAGGAATCATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR CAA 90 bp | CCACACCTTCATAAACAGAGGGCCCAGCAGTCACACTGTGTGTTTTaGCCAAATATTCACTTGATTCAACGCCTACCTGGTATAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: PHLHKQRAQQSHCVF*PNIHLIQRLPGISD Trigger: GTCACTTATACCAGGTAGGCGTTGAATCAAGTGAATATTTGGCAAAAACACACAGTGTGACTGCTGGGCCCTCTGTTTATGAAGGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR TCA 90 bp | CTCATCTTCACATTGAGCAATTCTGTTGAGCAGCCAAAGAATTTTCTAGGGGAAGGAAAAGCTTATGGGTaGAACTGGACTCTAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LIFTLSNSVEQPKNFLGEGKAYG*NWTLAS Trigger: GGAGGCTAGAGTCCAGTTTCACCCATAAGCTTTTCC...TTCCCCTAGAAAATTCTTTGGCTGCTCAACAGAATTGCTCAATGTGAAGATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR TCA 90 bp | TTTTGCTACATACCAATTAGGAGCTCACACAACGTAAGAAGCTGGAGTTTCCATGAGAGAACGAGGGACTaGGGAAAACAGATTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: FCYIPIRSSHNVRSWSFHERTRD*GKQILG Trigger: CCCCAAAATCTGTTTTCCTCAGTCCCTCGTTCTCTC...ATGGAAACTCCAGCTTCTTACGTTGTGTGAGCTCCTAATTGGTATGTAGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR CCA 90 bp | CCCACACGCCATCACACCTTGAAAACTAAAGGTTTATGCACCATCTTTGGCTCAAATACTGTCCTAGGCTaGATATGGTGGCATAGACTT | + |
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Preference number: 2 (lower is better) Translates to: PTRHHTLKTKGLCTIFGSNTVLG*IWWHRL Trigger: AAGTCTATGCCACCATATCCAGCCTAGGACAGTATT...TGAGCCAAAGATGGTGCATAAACCTTTAGTTTTCAAGGTGTGATGGCGTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR GCA 90 bp | TCTTTTATAATCCAGAAATCCCTTCGGATTTATCCACAATCTATGCTTAACCACACAAGAGGTCCTGTCTaGTCCCCTGGGAGGTATCCT | + |
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Preference number: 2 (lower is better) Translates to: SFIIQKSLRIYPQSMLNHTRGPV*SPGRYP Trigger: AGGATACCTCCCAGGGGAGCAGACAGGACCTCTTGT...GTGGTTAAGCATAGATTGTGGATAAATCCGAAGGGATTTCTGGATTATAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR GCA 90 bp | GCCATGACCTCTCTCCCTGTAGGAAATGGCCATAATTTTCTGGTAGCACAGTTCTCATTTAACAGGCAGTaGAATAAAGCAAAGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: AMTSLPVGNGHNFLVAQFSFNRQ*NKAKSK Trigger: CTTGCTCTTTGCTTTATTGCACTGCCTGTTAAATGA...GAACTGTGCTACCAGAAAATTATGGCCATTTCCTACAGGGAGAGAGGTCATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCTACATACCAATTAGGAGCTCACACAACGTAAGAAGCTGGAGTTTCCATACATTTGAAAGAGCATaGTTCCTCTCACCCGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FCYIPIRSSHNVRSWSFHTFERA*FLSPGE Trigger: CTCTCCGGGTGAGAGGAAGCATGCTCTTTCAAATGT...ATGGAAACTCCAGCTTCTTACGTTGTGTGAGCTCCTAATTGGTATGTAGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCCTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATAGAGGGAAAAGCTTATaGGTGAAACTGGACTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: CFLSPGELYACFCFCINYRGKSL*VKLDSS Trigger: GCTAGAGTCCAGTTTCACCCATAAGCTTTTCCCTCT...ATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAGGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTACTCAGAGGGTCATATAAGTCCTGTGTAGAAAGGGGAAAACCAAACCAAGTCTCATGTATGGGCTaGTTAGGATCACTGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: CLLRGSYKSCVERGKPNQVSCMG*LGSLKL Trigger: CAGTTTCAGTGATCCTAACCAGCCCATACATGAGAC...TTGGTTTGGTTTTCCCCTTTCTACACAGGACTTATATGACCCTCTGAGTAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR TCA 90 bp | CTCATCTTCACATTGAGCAATTCTGTTGAGCAGCCAAAGAATTTTCTAGGGGAAGGTAGCACAGTTCATTaGAGGCTGATAGAAATGACC | + |
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Preference number: 2 (lower is better) Translates to: LIFTLSNSVEQPKNFLGEGSTVH*RLIEMT Trigger: GGTCATTTCTATCAGCCTTCAATGAACTGTGCTACC...TTCCCCTAGAAAATTCTTTGGCTGCTCAACAGAATTGCTCAATGTGAAGATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCTTCAGTGTGGCACCAGATTCAGGGTCACAGTCACATTTGAAAGAGCATATTCAAGATTCACTGTaGCAAGAAAGAGTCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: EVFSVAPDSGSQSHLKEHIQDSL*QERVIL Trigger: GAGAATGACTCTTTCTTGGCACAGTGAATCTTGAAT...ATGCTCTTTCAAATGTGACTGTGACCCTGAATCTGGTGCCACACTGAAGACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR CCA 90 bp | GACATGATTCCTACAAGTGGTTATAGCAGTTTAATTAGCCCTCATGACTCACAAGGAAACCTGGGGAAATaGGGACATTCAAGAGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: DMIPTSGYSSLISPHDSQGNLGK*GHSRGN Trigger: ATTACCTCTTGAATGTCCCCATTTCCCCAGGTTTCC...TTGTGAGTCATGAGGGCTAATTAAACTGCTATAACCACTTGTAGGAATCATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATGAGTCATTCTCCTGTCTaGAAAACATGGATCAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: ASSHPESFMPVFAFALTMSHSPV*KTWIKD Trigger: ATCTTTGATCCATGTTTTCCAGACAGGAGAATGACT...CATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAGGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGATCACTGAAACTGTACTTTTCCTTTGTTTGCATAATATACACCGCATTGGTTCCACCTGGTGTGTaGATGACTTCATTTAACAGG | + |
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Preference number: 2 (lower is better) Translates to: LGSLKLYFSFVCIIYTALVPPGV*MTSFNR Trigger: CCTGTTAAATGAAGTCATGCACACACCAGGTGGAAC...CAATGCGGTGTATATTATGCAAACAAAGGAAAAGTACAGTTTCAGTGATCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR CAA 90 bp | ATGTATGGGCTGGTTAGGATCACTGAAACTGTACTTTTCCTTTGTTaGCATAATATACACCGCATTGTGTTTAACATGATCTCAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: MYGLVRITETVLFLC*HNIHRIVFNMISEC Trigger: ACACTCTGAGATCATGTTAAACACAATGCGGTGTATATTATGCAAACAAAGGAAAAGTACAGTTTCAGTGATCCTAACCAGCCCATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR GCA 90 bp | TCTTTTATAATCCAGAAATCCCTTCGGATTTATCCACAATCTATGCTTAACCACACCCGGAGAGCTTTATaGCTGTTTTTGCTTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: SFIIQKSLRIYPQSMLNHTRRAL*LFLLLH Trigger: ATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGT...GTGGTTAAGCATAGATTGTGGATAAATCCGAAGGGATTTCTGGATTATAAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR GCA 90 bp | TTAGGATCACTGAAACTGTACTTTTCCTTTGTTTGCATAATATACACCGCATTGGCCTGTTTTTGCTTTTaGATTAACTATGGACACAGA | + |
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Preference number: 2 (lower is better) Translates to: LGSLKLYFSFVCIIYTALACFCF*INYGHR Trigger: TCTGTGTCCATAGTTAATGCAAAAGCAAAAACAGGC...CAATGCGGTGTATATTATGCAAACAAAGGAAAAGTACAGTTTCAGTGATCCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR GCA 72 bp | GTGTTTCACGGCTCAAACACTGGCTCAAACGGGGCATaGCACACCTTCATAAACAGAGGGCCCAGCAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: VFHGSNTGSNGA*HTFINRGPSSH Trigger: GTGACTGCTGGGCCCTCTGTTTATGAAGGTGTGGCATGCCCCGTTTGAGCCAGTGTTTGAGCCGTGAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR GCA 72 bp | CACTCCGCCACTTTGACCAGAGGTGCCACTTTAGTTTaGGGTCTCCCATATCCTCGGTGTGGTTCGGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: HSATLTRGATLV*GLPYPRCGSEN Trigger: ATTCTCCGAACCACACCGAGGATATGGGAGACCGCAAACTAAAGTGGCACCTCTGGTCAAAGTGGCGGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR GCA 72 bp | GAAGTAGAGCTGTCACTCCGCCACTTTGACCAGAGGTaGCACTTTAGTTTGCGGTCTCCCATATCCTCGGTG | + |
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Preference number: 3 (lower is better) Translates to: EVELSLRHFDQR*HFSLRSPISSV Trigger: CACCGAGGATATGGGAGACCGCAAACTAAAGTGGCACCTCTGGTCAAAGTGGCGGAGTGACAGCTCTACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR-3UTR CAA 90 bp | CAGAGGTGCCACTTTAGTTTGCGGTCTCCCATATCCTCGGTGTGGTTCGGAGAAGGGTCACAGTCACATTaGAAAGAGCATGCTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: QRCHFSLRSPISSVWFGEGSQSH*KEHASS Trigger: AGAGGAAGCATGCTCTTTCAAATGTGACTGTGACCC...TTCTCCGAACCACACCGAGGATATGGGAGACCGCAAACTAAAGTGGCACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR GCA 72 bp | CCACCTGGTGTGTGCATGACTTCATTTAACAGGCAGTaGAATAAAGCAAAGAGCAAGTGGGCCAGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PPGVCMTSFNRQ*NKAKSKWASRL Trigger: CAGCCTGCTGGCCCACTTGCTCTTTGCTTTATTGCACTGCCTGTTAAATGAAGTCATGCACACACCAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR TCA 72 bp | TTGCAATTTAAACGCCAAAAGATGACCTCATTTCCTTaGGCCAGGGCATGTTCGAGGCCCTTCAGGAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: LQFKRQKMTSFP*ARACSRPFRSS Trigger: GGAACTCCTGAAGGGCCTCGAACATGCCCTGGCTCAAGGAAATGAGGTCATCTTTTGGCGTTTAAATTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR CCA 72 bp | AAACCAAACCAGTTTGCTTCCAGTAAACTAGGACGATaGACCTTAAATCTTCCCGGAGGGGCAGCCTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: KPNQFASSKLGR*TLNLPGGAAFY Trigger: GTAGAAGGCTGCCCCTCCGGGAAGATTTAAGGTCCATCGTCCTAGTTTACTGGAAGCAAACTGGTTTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
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| 3UTR GCA 72 bp | ACCAGATTCAGGGTCACAGTCACATTTGAAAGAGCATaGTTCCTCTCACCCGGAGAGCTTTATGCCTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: TRFRVTVTFERA*FLSPGELYACF Trigger: AAAACAGGCATAAAGCTCTCCGGGTGAGAGGAAGCATGCTCTTTCAAATGTGACTGTGACCCTGAATCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
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| 3UTR TCA 72 bp | CTATGCTTAACCACAAACCCACACGCCATCACACCTTaGAAACTAAAGGTTTATGCACCATCTTTGGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LCLTTNPHAITP*KLKVYAPSLAH Trigger: GTGAGCCAAAGATGGTGCATAAACCTTTAGTTTTCAAGGTGTGATGGCGTGTGGGTTTGTGGTTAAGCATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| 3UTR GCA 72 bp | AGTGCAATAAAGCAAAGAGCAAGTGGGCCAGCAGGCTaGACAGTATACAAGCACTTAGCATTACACAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SAIKQRASGPAG*TVYKHLALHKS Trigger: ACTTTTGTGTAATGCTAAGTGCTTGTATACTGTGCAGCCTGCTGGCCCACTTGCTCTTTGCTTTATTGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| 3UTR TCA 72 bp | TCTTATCAGACGCTAGAGTTCCACCTGGTGTGTGCATaGCTTCATTTAACAGGCAGTGCAATAAAGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SYQTLEFHLVCA*LHLTGSAIKQR Trigger: TCTTTGCTTTATTGCACTGCCTGTTAAATGAAGTCATGCACACACCAGGTGGAACTCTAGCGTCTGATAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| 3UTR TCA 72 bp | TTGATTCAACGCCTACCTGGTATAAGTGACTATAATTaGCTCAGGCAGGCAATAACACAGAGAGAGAACGAG | + |
|
Preference number: 3 (lower is better) Translates to: LIQRLPGISDYN*LRQAITQRENE Trigger: CTCGTTCTCTCTCTGTGTTATTGCCTGCCTGAGTCAATTATAGTCACTTATACCAGGTAGGCGTTGAATCAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| 3UTR GCA 72 bp | CTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTaGATTAACTATGGACACAGAGTGCTAACTAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSPGELYACFCF*INYGHRVLTSL Trigger: TAAGCTAGTTAGCACTCTGTGTCCATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| 3UTR GCA 72 bp | CGACATGGGAAGCCTAATTTCAAAAACACTGCCGTCTaGTACCAGATAGCTGTTTATTTGGTTGACACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RHGKPNFKNTAV*YQIAVYLVDTE Trigger: TTCAGTGTCAACCAAATAAACAGCTATCTGGTAGCAGACGGCAGTGTTTTTGAAATTAGGCTTCCCATGTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTACTCAGAGGGTCATATAAGTCCTGTGTAGAAAGGGGAAAACCAAACCAATTCCTCATCTTCACATaGAGCAATTCTGTTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: CLLRGSYKSCVERGKPNQFLIFT*SNSVEQ Trigger: CTGCTCAACAGAATTGCTCAATGTGAAGATGAGGAA...TTGGTTTGGTTTTCCCCTTTCTACACAGGACTTATATGACCCTCTGAGTAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| 3UTR TCA 72 bp | ACTATAAAAGAAATACAAGAGGGAAAAGCTTATGGGTaGAACTGGACTCTAGCCTCCTCCAGACAGGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: TIKEIQEGKAYG*NWTLASSRQEV Trigger: TACTTCCTGTCTGGAGGAGGCTAGAGTCCAGTTTCACCCATAAGCTTTTCCCTCTTGTATTTCTTTTATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| 3UTR TCA 72 bp | TTTGTTTGCATAATATACACCGCATTGTGTTTAACATaGTCTCAGAGTGTGTACCGAAACCTCTCAACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FVCIIYTALCLT*SQSVYRNLSTF Trigger: GAAAGTTGAGAGGTTTCGGTACACACTCTGAGATCATGTTAAACACAATGCGGTGTATATTATGCAAACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGCAGCCTTCTACTTGGAAGTAGAGCTGTCACTCCGCCACTTTGACCAGGGCTTCTCCTTGGGGTaGTGGGGCTCCGACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGAAFYLEVELSLRHFDQGFSLG*WGSDLC Trigger: GCACAGGTCGGAGCCCCAGCACCCCAAGGAGAAGCC...CTGGTCAAAGTGGCGGAGTGACAGCTCTACTTCCAAGTAGAAGGCTGCCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTCTGGCTTTTCCTCAGCCTaGGGGACAGGTGTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKARQSRGTAPTHGAQKSGFSSA*GTGVQG Trigger: ACCCTGGACACCTGTCCCCCAGGCTGAGGAAAAGCC...AGACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTCCTGTCTGCTCCCCTGGGAGGTATCCTGAAAGAACTGCCTGGGGGAGATTTCTCCTTGGGGTGCTaGGGCTCCGACCTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EVLSAPLGGILKELPGGDFSLGC*GSDLCL Trigger: CAGGCACAGGTCGGAGCCCCAGCACCCCAAGGAGAA...ATCTCCCCCAGGCAGTTCTTTCAGGATACCTCCCAGGGGAGCAGACAGGACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTCCTGTCTGCTCCCCTGGGAGGTATCCTGAAAGAACTGCCTGGGGGAGATTGGTGGCCGCCTTCTTaGCAAGATGGAGTTAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EVLSAPLGGILKELPGGDWWPPS*QDGVRR Trigger: GCGCCTAACTCCATCTTGTCAAGAAGGCGGCCACCA...ATCTCCCCCAGGCAGTTCTTTCAGGATACCTCCCAGGGGAGCAGACAGGACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTCCTGTCTGCTCCCCTGGGAGGTATCCTGAAAGAACTGCCTGGGGGAGATCCAACGGCCAGGTTCTaGGGATTGTCCATGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVLSAPLGGILKELPGGDPTARF*GLSMYQ Trigger: CTGGTACATGGACAATCCCCAGAACCTGGCCGTTGG...ATCTCCCCCAGGCAGTTCTTTCAGGATACCTCCCAGGGGAGCAGACAGGACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGAGGCTGAGGCAGGAGGATTATCAGTTCAAAGCCAGCCTGGACTCCGTCAAATGGCTTCTCCTTaGGGTGCTGGGGCTCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: TQEAEAGGLSVQSQPGLRQMASP*GAGAPT Trigger: GGTCGGAGCCCCAGCACCCCAAGGAGAAGCCATTTG...ACGGAGTCCAGGCTGGCTTTGAACTGATAATCCTCCTGCCTCAGCCTCCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR GCA 90 bp | GACTCTGTCCTCTACCATGGCAGAGAAAATAAGTCACAGCCCCTGGCTCTCCTGACAGGTGTCCAGGGTTaGCAGGAGGAGGCCACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DSVLYHGRENKSQPLALLTGVQG*QEEATE Trigger: TTCGGTGGCCTCCTCCTGGCAACCCTGGACACCTGT...CAGGAGAGCCAGGGGCTGTGACTTATTTTCTCTGCCATGGTAGAGGACAGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAGAAGCTGGAGTTTCCATGCACTAAGCTCAGTGCTTGCAGGAGGTGTTTCGAAGGCGTGAGTCCCTaGCTCGCACCCTTCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKKLEFPCTKLSACRRCFEGVSP*LAPFLP Trigger: GGGCAGGAAGGGTGCGAGCCAGGGACTCACGCCTTC...GAAACACCTCCTGCAAGCACTGAGCTTAGTGCATGGAAACTCCAGCTTCTTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR TCA 90 bp | GACTCTGTCCTCTACCATGGCAGAGAAAATAAGTCACAGCCCCTGGCTCTCCTGCCACCACACCCCCGATaGTCTCAGTCTTGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSVLYHGRENKSQPLALLPPHPR*SQSCRP Trigger: TGGCCTACAAGACTGAGATCATCGGGGGTGTGGTGG...CAGGAGAGCCAGGGGCTGTGACTTATTTTCTCTGCCATGGTAGAGGACAGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCTACCATGGCAGAGAAAATAAGTCACAGCCCCTGGCTCTCCTGCACGCAATGGTGGCCGCCTTCTTaGCAAGATGGAGTTAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTMAEKISHSPWLSCTQWWPPS*QDGVRR Trigger: GCGCCTAACTCCATCTTGTCAAGAAGGCGGCCACCA...TTGCGTGCAGGAGAGCCAGGGGCTGTGACTTATTTTCTCTGCCATGGTAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR GCA 90 bp | GCCATGACCTCTCTCCCTGTAGGAAATGGCCATAATTTTCTGGTAGCACAGTTCGGCTTCTCCTTGGGGTaGTGGGGCTCCGACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AMTSLPVGNGHNFLVAQFGFSLG*WGSDLC Trigger: GCACAGGTCGGAGCCCCAGCACCCCAAGGAGAAGCC...GAACTGTGCTACCAGAAAATTATGGCCATTTCCTACAGGGAGAGAGGTCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAGAAGCTGGAGTTTCCATGCACTAAGCTCAGTGCTTGCAGGAGGTGTTTCTTCTCCTTGGGGTGCTaGGGCTCCGACCTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKKLEFPCTKLSACRRCFFSLGC*GSDLCL Trigger: CAGGCACAGGTCGGAGCCCCAGCACCCCAAGGAGAA...GAAACACCTCCTGCAAGCACTGAGCTTAGTGCATGGAAACTCCAGCTTCTTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR CCA 90 bp | GAGGTCCTGTCTGCTCCCCTGGGAGGTATCCTGAAAGAACTGCCTGGGGGAGATAGGAGGCAGTTGGCCTaGGTATCCAGGATAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: EVLSAPLGGILKELPGGDRRQLA*VSRIKY Trigger: ATACTTTATCCTGGATACCCAGGCCAACTGCCTCCT...ATCTCCCCCAGGCAGTTCTTTCAGGATACCTCCCAGGGGAGCAGACAGGACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCTACCATGGCAGAGAAAATAAGTCACAGCCCCTGGCTCTCCTGCACGCAACCAACGGCCAGGTTCTaGGGATTGTCCATGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTMAEKISHSPWLSCTQPTARF*GLSMYQ Trigger: CTGGTACATGGACAATCCCCAGAACCTGGCCGTTGG...TTGCGTGCAGGAGAGCCAGGGGCTGTGACTTATTTTCTCTGCCATGGTAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTCTGCTTCTTCTCTAGGGTaGGAGGAGCTGTTAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKARQSRGTAPTHGAQKSASSLG*EELLSF Trigger: AAAACTTAACAGCTCCTCCCACCCTAGAGAAGAAGC...AGACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGACCTCTCTCCCTGTAGGAAATGGCCATAATTTTCTGGTAGCACAGTTCGGCGGCAGCCTGACGTaGGGATGTAGCTCTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: AMTSLPVGNGHNFLVAQFGGSLT*GCSSET Trigger: GGTCTCAGAGCTACATCCCCACGTCAGGCTGCCGCC...GAACTGTGCTACCAGAAAATTATGGCCATTTCCTACAGGGAGAGAGGTCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| 3UTR CAA 72 bp | TCACTCCGCCACTTTGACCAGAGGTGCCACTTTAGTTaGCGGTCTCCCATATCCTCGGTGTGGTTCGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRHFDQRCHFS*RSPISSVWFGE Trigger: TTCTCCGAACCACACCGAGGATATGGGAGACCGCAAACTAAAGTGGCACCTCTGGTCAAAGTGGCGGAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATGGGCTCGCACCCTTCCTaGCCATCCCCACCGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSHPESFMPVFAFALTMGSHPS*PSPPFW Trigger: CCAGAACGGTGGGGATGGGCAGGAAGGGTGCGAGCC...CATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAGGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGACCTCTCTCCCTGTAGGAAATGGCCATAATTTTCTGGTAGCACAGTTCCAAATGGCTTCTCCTTaGGGTGCTGGGGCTCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: AMTSLPVGNGHNFLVAQFQMASP*GAGAPT Trigger: GGTCGGAGCCCCAGCACCCCAAGGAGAAGCCATTTG...GAACTGTGCTACCAGAAAATTATGGCCATTTCCTACAGGGAGAGAGGTCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTCTTCAGTGTGGCACCAGATTCAGGGTCACAGTCACATTTGAAAGAGCATACAGGTGTCCAGGGTTaGCAGGAGGAGGCCACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVFSVAPDSGSQSHLKEHTGVQG*QEEATE Trigger: TTCGGTGGCCTCCTCCTGGCAACCCTGGACACCTGT...ATGCTCTTTCAAATGTGACTGTGACCCTGAATCTGGTGCCACACTGAAGACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTCTGATAACGAAGCAGAATaGCGTTTTAGGTTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKARQSRGTAPTHGAQKSDNEAE*RFRFLL Trigger: AAGCAGAAACCTAAAACGCCATTCTGCTTCGTTATC...AGACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTTCAGTGTGGCACCAGATTCAGGGTCACAGTCACATTTGAAAGAGCATGGCTTTTCCTCAGCCTaGGGGACAGGTGTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVFSVAPDSGSQSHLKEHGFSSA*GTGVQG Trigger: ACCCTGGACACCTGTCCCCCAGGCTGAGGAAAAGCC...ATGCTCTTTCAAATGTGACTGTGACCCTGAATCTGGTGCCACACTGAAGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGCTACATACCAATTAGGAGCTCACACAACGTAAGAAGCTGGAGTTTCCATGGAAGGGCGGCAGCCTaGCGTGGGGATGTAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCYIPIRSSHNVRSWSFHGRAAA*RGDVAL Trigger: CAGAGCTACATCCCCACGTCAGGCTGCCGCCCTTCC...ATGGAAACTCCAGCTTCTTACGTTGTGTGAGCTCCTAATTGGTATGTAGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR TCA 90 bp | TCCTCTACCATGGCAGAGAAAATAAGTCACAGCCCCTGGCTCTCCTGCACGCAATTGACCAGACACTCGTaGGTCTTGAGAACATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSTMAEKISHSPWLSCTQLTRHS*VLRTSL Trigger: CAAGGATGTTCTCAAGACTCACGAGTGTCTGGTCAA...TTGCGTGCAGGAGAGCCAGGGGCTGTGACTTATTTTCTCTGCCATGGTAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR GCA 90 bp | GAGATATCCCAAAAATTCACCTTTCACTCCCCAGACTCTTACGACCGCTCTCAGCCTGACTCGAGAACTTaGCAGCACCCCTGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EISQKFTFHSPDSYDRSQPDSRT*QHPCSC Trigger: ACAGCTACAGGGGTGCTGGCAAGTTCTCGAGTCAGG...CTGAGAGCGGTCGTAAGAGTCTGGGGAGTGAAAGGTGAATTTTTGGGATATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATGGACACGACGGCTCCCTAGGGTaGCACTTCAGAGCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LSPGELYACFCFCINYGHDGSLG*HFRAWT Trigger: TGTCCAGGCTCTGAAGTGCCACCCTAGGGAGCCGTC...GTGTCCATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATGGACACCCACCACACCCCCGATaGTCTCAGTCTTGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPGELYACFCFCINYGHPPHPR*SQSCRP Trigger: TGGCCTACAAGACTGAGATCATCGGGGGTGTGGTGG...GTGTCCATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | GACATGATTCCTACAAGTGGTTATAGCAGTTTAATTAGCCCTCATGACTCACAAGAAGGCGTGAGTCCCTaGCTCGCACCCTTCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DMIPTSGYSSLISPHDSQEGVSP*LAPFLP Trigger: GGGCAGGAAGGGTGCGAGCCAGGGACTCACGCCTTC...TTGTGAGTCATGAGGGCTAATTAAACTGCTATAACCACTTGTAGGAATCATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCTACATACCAATTAGGAGCTCACACAACGTAAGAAGCTGGAGTTTCCATGGCGGCAGCCTGACGTaGGGATGTAGCTCTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FCYIPIRSSHNVRSWSFHGGSLT*GCSSET Trigger: GGTCTCAGAGCTACATCCCCACGTCAGGCTGCCGCC...ATGGAAACTCCAGCTTCTTACGTTGTGTGAGCTCCTAATTGGTATGTAGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR TCA 90 bp | GAGATATCCCAAAAATTCACCTTTCACTCCCCAGACTCTTACGACCGCTCTCAGCAGCTTTGGGTACAGTaGTCTTGCTGGCTTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EISQKFTFHSPDSYDRSQQLWVQ*SCWLGS Trigger: TGAACCAAGCCAGCAAGATCACTGTACCCAAAGCTG...CTGAGAGCGGTCGTAAGAGTCTGGGGAGTGAAAGGTGAATTTTTGGGATATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTGCCACTTTAGTTTGCGGTCTCCCATATCCTCGGTGTGGTTCGGAGAATTTAGGTTTCTGCTTTaGGGTAGCTATGCTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRCHFSLRSPISSVWFGEFRFLL*GSYAHL Trigger: AAGGTGAGCATAGCTACCCCAAAGCAGAAACCTAAA...TTCTCCGAACCACACCGAGGATATGGGAGACCGCAAACTAAAGTGGCACCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR CCA 90 bp | TTCAAGATTCACTGTGCCAAGAAAGAGTCATTCTCCTGTCTGGAAAACATGGATGACGGCTCCCTAGGGTaGCACTTCAGAGCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FKIHCAKKESFSCLENMDDGSLG*HFRAWT Trigger: TGTCCAGGCTCTGAAGTGCCACCCTAGGGAGCCGTC...ATCCATGTTTTCCAGACAGGAGAATGACTCTTTCTTGGCACAGTGAATCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR TCA 90 bp | GCCATGACCTCTCTCCCTGTAGGAAATGGCCATAATTTTCTGGTAGCACAGTTCTTGACCAGACACTCGTaGGTCTTGAGAACATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AMTSLPVGNGHNFLVAQFLTRHS*VLRTSL Trigger: CAAGGATGTTCTCAAGACTCACGAGTGTCTGGTCAA...GAACTGTGCTACCAGAAAATTATGGCCATTTCCTACAGGGAGAGAGGTCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGATCACTGAAACTGTACTTTTCCTTTGTTTGCATAATATACACCGCATTGGGCTCGCACCCTTCCTaGCCATCCCCACCGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSLKLYFSFVCIIYTALGSHPS*PSPPFW Trigger: CCAGAACGGTGGGGATGGGCAGGAAGGGTGCGAGCC...CAATGCGGTGTATATTATGCAAACAAAGGAAAAGTACAGTTTCAGTGATCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR CCA 90 bp | GAGATATCCCAAAAATTCACCTTTCACTCCCCAGACTCTTACGACCGCTCTCAGAGGAGGCAGTTGGCCTaGGTATCCAGGATAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: EISQKFTFHSPDSYDRSQRRQLA*VSRIKY Trigger: ATACTTTATCCTGGATACCCAGGCCAACTGCCTCCT...CTGAGAGCGGTCGTAAGAGTCTGGGGAGTGAAAGGTGAATTTTTGGGATATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCTACCATGGCAGAGAAAATAAGTCACAGCCCCTGGCTCTCCTGCACGCAAGATAACGAAGCAGAATaGCGTTTTAGGTTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTMAEKISHSPWLSCTQDNEAE*RFRFLL Trigger: AAGCAGAAACCTAAAACGCCATTCTGCTTCGTTATC...TTGCGTGCAGGAGAGCCAGGGGCTGTGACTTATTTTCTCTGCCATGGTAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATGGACACCAGCTTTGGGTACAGTaGTCTTGCTGGCTTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPGELYACFCFCINYGHQLWVQ*SCWLGS Trigger: TGAACCAAGCCAGCAAGATCACTGTACCCAAAGCTG...GTGTCCATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTTCAGTGTGGCACCAGATTCAGGGTCACAGTCACATTTGAAAGAGCATGTCGAGTCAAAGAAATaGACCTTGAAAAGGACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVFSVAPDSGSQSHLKEHVESKK*TLKRTA Trigger: AGCCGTCCTTTTCAAGGTCCATTTCTTTGACTCGAC...ATGCTCTTTCAAATGTGACTGTGACCCTGAATCTGGTGCCACACTGAAGACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR TCA 90 bp | GACGACATGATTCCTACAAGTGGTTATAGCAGTTTAATTAGCCCTCATGACTCATCCTGGAGGTGGTTATaGTTTCAAACAGGTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DDMIPTSGYSSLISPHDSSWRWL*FQTGCP Trigger: GGGACAACCTGTTTGAAATCATAACCACCTCCAGGA...TGAGTCATGAGGGCTAATTAAACTGCTATAACCACTTGTAGGAATCATGTCGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATGCTTCTTCTCTAGGGTaGGAGGAGCTGTTAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CFLSPGELYACFCFCINYASSLG*EELLSF Trigger: AAAACTTAACAGCTCCTCCCACCCTAGAGAAGAAGC...ATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAGGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| 3UTR CAA 72 bp | TCTATGCTTAACCACAAACCCACACGCCATCACACCTaGAAAACTAAAGGTTTATGCACCATCTTTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SMLNHKPTRHHT*KTKGLCTIFGS Trigger: TGAGCCAAAGATGGTGCATAAACCTTTAGTTTTCAAGGTGTGATGGCGTGTGGGTTTGTGGTTAAGCATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR TCA 90 bp | CTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATGGACACTTTCGTCATCAAGGTTaGATACAAATGGCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPGELYACFCFCINYGHFRHQG*IQMASP Trigger: AGGAGAAGCCATTTGTATTCAACCTTGATGACGAAA...GTGTCCATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGATTCACTGTGCCAAGAAAGAGTCATTCTCCTGTCTGGAAAACATGGATGTCGAGTCAAAGAAATaGACCTTGAAAAGGACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKIHCAKKESFSCLENMDVESKK*TLKRTA Trigger: AGCCGTCCTTTTCAAGGTCCATTTCTTTGACTCGAC...ATCCATGTTTTCCAGACAGGAGAATGACTCTTTCTTGGCACAGTGAATCTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTTCAGTGTGGCACCAGATTCAGGGTCACAGTCACATTTGAAAGAGCATGATCTTTCTGGTCATTaGCTTGAAGAAAATATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVFSVAPDSGSQSHLKEHDLSGH*LEENIS Trigger: AGAGATATTTTCTTCAAGCCAATGACCAGAAAGATC...ATGCTCTTTCAAATGTGACTGTGACCCTGAATCTGGTGCCACACTGAAGACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGATCACTGAAACTGTACTTTTCCTTTGTTTGCATAATATACACCGCATTGTCCTGGAGGTGGTTATaGTTTCAAACAGGTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSLKLYFSFVCIIYTALSWRWL*FQTGCP Trigger: GGGACAACCTGTTTGAAATCATAACCACCTCCAGGA...CAATGCGGTGTATATTATGCAAACAAAGGAAAAGTACAGTTTCAGTGATCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| 3UTR CAA 72 bp | CAGCAGTCACACTGTGTGTTTTTGCCAAATATTCACTaGATTCAACGCCTACCTGGTATAAGTGACTATAAT | + |
|
Preference number: 4 (lower is better) Translates to: QQSHCVFLPNIH*IQRLPGISDYN Trigger: ATTATAGTCACTTATACCAGGTAGGCGTTGAATCAAGTGAATATTTGGCAAAAACACACAGTGTGACTGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| 3UTR CAA 72 bp | CTGGTTAGGATCACTGAAACTGTACTTTTCCTTTGTTaGCATAATATACACCGCATTGTGTTTAACATGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVRITETVLFLC*HNIHRIVFNMI Trigger: GATCATGTTAAACACAATGCGGTGTATATTATGCAAACAAAGGAAAAGTACAGTTTCAGTGATCCTAACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR CCA 90 bp | TCTTTTATAATCCAGAAATCCCTTCGGATTTATCCACAATCTATGCTTAACCACGATCTTTCTGGTCATTaGCTTGAAGAAAATATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFIIQKSLRIYPQSMLNHDLSGH*LEENIS Trigger: AGAGATATTTTCTTCAAGCCAATGACCAGAAAGATC...GTGGTTAAGCATAGATTGTGGATAAATCCGAAGGGATTTCTGGATTATAAAAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS TCA 90 bp | GTAGCCACTCTTAATGAGGGGAGGCCCAGTGGAAGGGCGGCAGCCTaGCGTGGGGATGTAGCTCTGAGACCTTCGCAGGAAGGCGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VATLNEGRPSGRAAA*RGDVALRPSQEGVS Trigger: ACTCACGCCTTCCTGCGAAGGTCTCAGAGCTACATCCCCACGTCAGGCTGCCGCCCTTCCACTGGGCCTCCCCTCATTAAGAGTGGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | GACTCTGTCCTCTACCATGGCAGAGAAAATAAGTCACAGCCCCTGGCTCTCCTGGACAGGTGTCCAGGGTaGCCAGGAGGAGGCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: DSVLYHGRENKSQPLALLDRCPG*PGGGHR Trigger: TCGGTGGCCTCCTCCTGGCAACCCTGGACACCTGTC...CAGGAGAGCCAGGGGCTGTGACTTATTTTCTCTGCCATGGTAGAGGACAGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS CCA 90 bp | ATGGACCTTGAAAAGGACGGCTCCCTAGGGTGGCACTTCAGAGCCTaGACAGCTGCTCCAATCCCCTCGATCCAGCTGTGCATGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MDLEKDGSLGWHFRA*TAAPIPSIQLCMSS Trigger: TGAGGACATGCACAGCTGGATCGAGGGGATTGGAGCAGCTGTCCAGGCTCTGAAGTGCCACCCTAGGGAGCCGTCCTTTTCAAGGTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS TCA 90 bp | CCACCTGCGGCTTCTTCTCTAGGGTGGGAGGAGCTGTTAAGTTTTTaGGAACTTCTGTGGCCAAGGGTACTGTCCCAGCTTTGGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: PPAASSLGWEELLSF*ELLWPRVLSQLWVQ Trigger: CTGTACCCAAAGCTGGGACAGTACCCTTGGCCACAGAAGTTCTCAAAAACTTAACAGCTCCTCCCACCCTAGAGAAGAAGCCGCAGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | CAAGATTCACTGTGCCAAGAAAGAGTCATTCTCCTGTCTGGAAAACATGGATCAGACAGGTGTCCAGGGTaGCCAGGAGGAGGCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: QDSLCQERVILLSGKHGSDRCPG*PGGGHR Trigger: TCGGTGGCCTCCTCCTGGCAACCCTGGACACCTGTC...TGATCCATGTTTTCCAGACAGGAGAATGACTCTTTCTTGGCACAGTGAATCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS CCA 90 bp | GCCAAGGGTACTGTCCCAGCTTTGGGTACAGTGATCTTGCTGGCTTaGTTCAAGGCTTCTACCCAGTCCTTCAGATCTTTCTGGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: AKGTVPALGTVILLA*FKASTQSFRSFWSL Trigger: CAATGACCAGAAAGATCTGAAGGACTGGGTAGAAGCCTTGAACCAAGCCAGCAAGATCACTGTACCCAAAGCTGGGACAGTACCCTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTACCATGGCAGAGAAAATAAGTCACAGCCCCTGGCTCTCCTGCACGCAATATCTCCGGAGGAATTaGCCACTGTTCTCATTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSTMAEKISHSPWLSCTQYLRRN*PLFSLS Trigger: AGACAATGAGAACAGTGGCAAATTCCTCCGGAGATA...TTGCGTGCAGGAGAGCCAGGGGCTGTGACTTATTTTCTCTGCCATGGTAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATGGACACGCCAGGTTCTGGGGATaGTCCATGTACCAGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPGELYACFCFCINYGHARFWG*SMYQRR Trigger: CCTCCTCTGGTACATGGACAATCCCCAGAACCTGGC...GTGTCCATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | ATCACAAGGCCAGACAAAGTCGGGGGACAGCTCCCACACACGGAGCCCAGAAGTATGATTTCAAACAGGTaGTCCCTCATTAAGAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: ITRPDKVGGQLPHTEPRSMISNR*SLIKRS Trigger: TGATCTCTTAATGAGGGACAACCTGTTTGAAATCAT...ACTTCTGGGCTCCGTGTGTGGGAGCTGTCCCCCGACTTTGTCTGGCCTTGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | GCCATGACCTCTCTCCCTGTAGGAAATGGCCATAATTTTCTGGTAGCACAGTTCAGTGATCTTGCTGGCTaGGTTCAAGGCTTCTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: AMTSLPVGNGHNFLVAQFSDLAG*VQGFYP Trigger: TGGGTAGAAGCCTTGAACCAAGCCAGCAAGATCACT...GAACTGTGCTACCAGAAAATTATGGCCATTTCCTACAGGGAGAGAGGTCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTCTTCAGTGTGGCACCAGATTCAGGGTCACAGTCACATTTGAAAGAGCATAGTGATCTTGCTGGCTaGGTTCAAGGCTTCTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: EVFSVAPDSGSQSHLKEHSDLAG*VQGFYP Trigger: TGGGTAGAAGCCTTGAACCAAGCCAGCAAGATCACT...ATGCTCTTTCAAATGTGACTGTGACCCTGAATCTGGTGCCACACTGAAGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTGCCACTTTAGTTTGCGGTCTCCCATATCCTCGGTGTGGTTCGGAGAATTTTCGTCATCAAGGTaGAATACAAATGGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRCHFSLRSPISSVWFGEFSSSR*NTNGFS Trigger: GGAGAAGCCATTTGTATTCAACCTTGATGACGAAAA...TTCTCCGAACCACACCGAGGATATGGGAGACCGCAAACTAAAGTGGCACCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR CAA 90 bp | GACTCTGTCCTCTACCATGGCAGAGAAAATAAGTCACAGCCCCTGGCTCTCCTGTTTTCGTCATCAAGGTaGAATACAAATGGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSVLYHGRENKSQPLALLFSSSR*NTNGFS Trigger: GGAGAAGCCATTTGTATTCAACCTTGATGACGAAAA...CAGGAGAGCCAGGGGCTGTGACTTATTTTCTCTGCCATGGTAGAGGACAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | CAAGATTCACTGTGCCAAGAAAGAGTCATTCTCCTGTCTGGAAAACATGGATCATTGGGTACAGTGATCTaGCTGGCTTGGTTCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QDSLCQERVILLSGKHGSLGTVI*LAWFKA Trigger: AGCCTTGAACCAAGCCAGCAAGATCACTGTACCCAA...TGATCCATGTTTTCCAGACAGGAGAATGACTCTTTCTTGGCACAGTGAATCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | GCCATGACCTCTCTCCCTGTAGGAAATGGCCATAATTTTCTGGTAGCACAGTTCTTGCCACTGTTCTCATaGTCTTCAATATCCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AMTSLPVGNGHNFLVAQFLPLFS*SSISRN Trigger: GTTTCTGGATATTGAAGACAATGAGAACAGTGGCAA...GAACTGTGCTACCAGAAAATTATGGCCATTTCCTACAGGGAGAGAGGTCATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | GACATGATTCCTACAAGTGGTTATAGCAGTTTAATTAGCCCTCATGACTCACAATTGGGTACAGTGATCTaGCTGGCTTGGTTCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DMIPTSGYSSLISPHDSQLGTVI*LAWFKA Trigger: AGCCTTGAACCAAGCCAGCAAGATCACTGTACCCAA...TTGTGAGTCATGAGGGCTAATTAAACTGCTATAACCACTTGTAGGAATCATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCTACATACCAATTAGGAGCTCACACAACGTAAGAAGCTGGAGTTTCCATTATCTCCGGAGGAATTaGCCACTGTTCTCATTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FCYIPIRSSHNVRSWSFHYLRRN*PLFSLS Trigger: AGACAATGAGAACAGTGGCAAATTCCTCCGGAGATA...ATGGAAACTCCAGCTTCTTACGTTGTGTGAGCTCCTAATTGGTATGTAGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS-3UTR CAA 90 bp | GACGACATGATTCCTACAAGTGGTTATAGCAGTTTAATTAGCCCTCATGACTCAGGAGCTGTTAAGTTTTaGAGAACTTCTGTGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DDMIPTSGYSSLISPHDSGAVKF*RTSVAK Trigger: CTTGGCCACAGAAGTTCTCAAAAACTTAACAGCTCC...TGAGTCATGAGGGCTAATTAAACTGCTATAACCACTTGTAGGAATCATGTCGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGATTCACTGTGCCAAGAAAGAGTCATTCTCCTGTCTGGAAAACATGGATTTGCCACTGTTCTCATaGTCTTCAATATCCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FKIHCAKKESFSCLENMDLPLFS*SSISRN Trigger: GTTTCTGGATATTGAAGACAATGAGAACAGTGGCAA...ATCCATGTTTTCCAGACAGGAGAATGACTCTTTCTTGGCACAGTGAATCTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCCTCTCACCCGGAGAGCTTTATGCCTGTTTTTGCTTTTGCATTAACTATATGATTTCAAACAGGTaGTCCCTCATTAAGAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: CFLSPGELYACFCFCINYMISNR*SLIKRS Trigger: TGATCTCTTAATGAGGGACAACCTGTTTGAAATCAT...ATAGTTAATGCAAAAGCAAAAACAGGCATAAAGCTCTCCGGGTGAGAGGAAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS-3UTR CAA 90 bp | TTAGGATCACTGAAACTGTACTTTTCCTTTGTTTGCATAATATACACCGCATTGGGAGCTGTTAAGTTTTaGAGAACTTCTGTGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGSLKLYFSFVCIIYTALGAVKF*RTSVAK Trigger: CTTGGCCACAGAAGTTCTCAAAAACTTAACAGCTCC...CAATGCGGTGTATATTATGCAAACAAAGGAAAAGTACAGTTTCAGTGATCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064883.14 |
||
| CDS GCA 72 bp | CGGCTCCCTAGGGTGGCACTTCAGAGCCTGGACAGCTaGTCCAATCCCCTCGATCCAGCTGTGCATGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLPRVALQSLDS*SNPLDPAVHVL Trigger: GAGGACATGCACAGCTGGATCGAGGGGATTGGAGCAGCTGTCCAGGCTCTGAAGTGCCACCCTAGGGAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS CAA 72 bp | CCGACAGCTCCTGCCCCAACGGCCAGGTTCTGGGGATaGTCCATGTACCAGAGGAGGCAGTTGGCCTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PTAPAPTARFWG*SMYQRRQLAWV Trigger: TACCCAGGCCAACTGCCTCCTCTGGTACATGGACAATCCCCAGAACCTGGCCGTTGGGGCAGGAGCTGTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000125466.2 ENSMUST00000128715.8 |
||
| CDS CCA 72 bp | GAAAAGGACGGCTCCCTAGGGTGGCACTTCAGAGCCTaGACAGCTGCTCCAATCCCCTCGATCCAGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: EKDGSLGWHFRA*TAAPIPSIQLC Trigger: GCACAGCTGGATCGAGGGGATTGGAGCAGCTGTCCAGGCTCTGAAGTGCCACCCTAGGGAGCCGTCCTTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS GCA 72 bp | CGAGATGTAGGTCAGCTGCAGAGATCCGACAGCTCCTaGCCCAACGGCCAGGTTCTGGGGATTGTCCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: RDVGQLQRSDSS*PNGQVLGIVHV Trigger: TACATGGACAATCCCCAGAACCTGGCCGTTGGGGCAGGAGCTGTCGGATCTCTGCAGCTGACCTACATCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000125466.2 ENSMUST00000128715.8 |
||
| CDS CCA 72 bp | AAAGAAATGGACCTTGAAAAGGACGGCTCCCTAGGGTaGCACTTCAGAGCCTGGACAGCTGCTCCAATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KEMDLEKDGSLG*HFRAWTAAPIP Trigger: GGGGATTGGAGCAGCTGTCCAGGCTCTGAAGTGCCACCCTAGGGAGCCGTCCTTTTCAAGGTCCATTTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS CAA 72 bp | TTCCTGCCCATCCCCACCGTTCTGGCTGATAGGCGTTaGTACCACCACACCCCCGATGATCTCAGTCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: FLPIPTVLADRR*YHHTPDDLSLV Trigger: TACAAGACTGAGATCATCGGGGGTGTGGTGGTACAAACGCCTATCAGCCAGAACGGTGGGGATGGGCAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS TCA 72 bp | CTGTGGCCAAGGGTACTGTCCCAGCTTTGGGTACAGTaGTCTTGCTGGCTTGGTTCAAGGCTTCTACCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LWPRVLSQLWVQ*SCWLGSRLLPS Trigger: ACTGGGTAGAAGCCTTGAACCAAGCCAGCAAGATCACTGTACCCAAAGCTGGGACAGTACCCTTGGCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS CAA 72 bp | GCCAAGGGTACTGTCCCAGCTTTGGGTACAGTGATCTaGCTGGCTTGGTTCAAGGCTTCTACCCAGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AKGTVPALGTVI*LAWFKASTQSF Trigger: GAAGGACTGGGTAGAAGCCTTGAACCAAGCCAGCAAGATCACTGTACCCAAAGCTGGGACAGTACCCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS CAA 90 bp | GCCACCTGCGGCTTCTTCTCTAGGGTGGGAGGAGCTGTTAAGTTTTaGAGAACTTCTGTGGCCAAGGGTACTGTCCCAGCTTTGGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: ATCGFFSRVGGAVKF*RTSVAKGTVPALGT Trigger: TGTACCCAAAGCTGGGACAGTACCCTTGGCCACAGAAGTTCTCAAAAACTTAACAGCTCCTCCCACCCTAGAGAAGAAGCCGCAGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS TCA 72 bp | GGTAGAACTTCCAGGTCGAGTCAAAGAAATGGACCTTaGAAAGGACGGCTCCCTAGGGTGGCACTTCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRTSRSSQRNGP*KGRLPRVALQS Trigger: GCTCTGAAGTGCCACCCTAGGGAGCCGTCCTTTTCAAGGTCCATTTCTTTGACTCGACCTGGAAGTTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
||
| CDS GCA 72 bp | TCATCAAGGTTGAATACAAATGGCTTCTCCTTGGGGTaGTGGGGCTCCGACCTGTGCCTGACTCGAGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: SSRLNTNGFSLG*WGSDLCLTREL Trigger: AAGTTCTCGAGTCAGGCACAGGTCGGAGCCCCAGCACCCCAAGGAGAAGCCATTTGTATTCAACCTTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064883.14 ENSMUST00000128715.8 |
||
| CDS CAA 90 bp | GGCCAAGGGTACTGTCCCAGCTTTGGGTACAGTGATCTTGCTGGCTaGGTTCAAGGCTTCTACCCAGTCCTTCAGATCTTTCTGGTCATT | + |
|
Preference number: 6 (lower is better) Translates to: GQGYCPSFGYSDLAG*VQGFYPVLQIFLVI Trigger: AATGACCAGAAAGATCTGAAGGACTGGGTAGAAGCCTTGAACCAAGCCAGCAAGATCACTGTACCCAAAGCTGGGACAGTACCCTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
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| CDS CAA 90 bp | ACTTCTGTGGCCAAGGGTACTGTCCCAGCTTTGGGTACAGTGATCTaGCTGGCTTGGTTCAAGGCTTCTACCCAGTCCTTCAGATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TSVAKGTVPALGTVI*LAWFKASTQSFRSF Trigger: GAAAGATCTGAAGGACTGGGTAGAAGCCTTGAACCAAGCCAGCAAGATCACTGTACCCAAAGCTGGGACAGTACCCTTGGCCACAGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
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| CDS TCA 72 bp | GCTTCTTCTCTAGGGTGGGAGGAGCTGTTAAGTTTTTaGGAACTTCTGTGGCCAAGGGTACTGTCCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: ASSLGWEELLSF*ELLWPRVLSQL Trigger: AAGCTGGGACAGTACCCTTGGCCACAGAAGTTCTCAAAAACTTAACAGCTCCTCCCACCCTAGAGAAGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
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| CDS CCA 72 bp | ACTGTCCCAGCTTTGGGTACAGTGATCTTGCTGGCTTaGTTCAAGGCTTCTACCCAGTCCTTCAGATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TVPALGTVILLA*FKASTQSFRSF Trigger: GAAAGATCTGAAGGACTGGGTAGAAGCCTTGAACCAAGCCAGCAAGATCACTGTACCCAAAGCTGGGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
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| CDS CAA 72 bp | AAAGAAGCGTCGTTTCCAACTCTTCCGCACATTCCCTaGCTTCACACAGTAGCCACTCTTAATGAGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: KEASFPTLPHIP*LHTVATLNEGR Trigger: CCTCCCCTCATTAAGAGTGGCTACTGTGTGAAGCAAGGGAATGTGCGGAAGAGTTGGAAACGACGCTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
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| CDS TCA 72 bp | CTCATTAAGAGATCACCAGACTTGACCAGACACTCGTaGGTCTTGAGAACATCCTTGAGCGGTATGGTACGC | + |
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Preference number: 6 (lower is better) Translates to: LIKRSPDLTRHS*VLRTSLSGMVR Trigger: GCGTACCATACCGCTCAAGGATGTTCTCAAGACTCACGAGTGTCTGGTCAAGTCTGGTGATCTCTTAATGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
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| CDS CAA 72 bp | TACTGTCCCAGCTTTGGGTACAGTGATCTTGCTGGCTaGGTTCAAGGCTTCTACCCAGTCCTTCAGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: YCPSFGYSDLAG*VQGFYPVLQIF Trigger: AAAGATCTGAAGGACTGGGTAGAAGCCTTGAACCAAGCCAGCAAGATCACTGTACCCAAAGCTGGGACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000128715.8 |
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| CDS CCA 72 bp | GATAACGAAGCAGAATGGCGTTTTAGGTTTCTGCTTTaGGGTAGCTATGCTCACCTTCGAGATGTAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: DNEAEWRFRFLL*GSYAHLRDVGQ Trigger: CTGACCTACATCTCGAAGGTGAGCATAGCTACCCCAAAGCAGAAACCTAAAACGCCATTCTGCTTCGTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000125466.2 ENSMUST00000128715.8 |
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| CDS CAA 90 bp | GTATCCAGGATAAAGTATCTCCGGAGGAATTTGCCACTGTTCTCATaGTCTTCAATATCCAGAAACCCACAGATTCGGTTCTGCCGATCC | + |
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Preference number: 6 (lower is better) Translates to: VSRIKYLRRNLPLFS*SSISRNPQIRFCRS Trigger: GGATCGGCAGAACCGAATCTGTGGGTTTCTGGATATTGAAGACAATGAGAACAGTGGCAAATTCCTCCGGAGATACTTTATCCTGGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000125466.2 ENSMUST00000128715.8 |
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| CDS CAA 90 bp | AGGCAGTTGGCCTGGGTATCCAGGATAAAGTATCTCCGGAGGAATTaGCCACTGTTCTCATTGTCTTCAATATCCAGAAACCCACAGATT | + |
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Preference number: 6 (lower is better) Translates to: RQLAWVSRIKYLRRN*PLFSLSSISRNPQI Trigger: AATCTGTGGGTTTCTGGATATTGAAGACAATGAGAACAGTGGCAAATTCCTCCGGAGATACTTTATCCTGGATACCCAGGCCAACTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000125466.2 ENSMUST00000128715.8 |
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| CDS CAA 72 bp | GCCTGGGTATCCAGGATAAAGTATCTCCGGAGGAATTaGCCACTGTTCTCATTGTCTTCAATATCCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: AWVSRIKYLRRN*PLFSLSSISRN Trigger: GTTTCTGGATATTGAAGACAATGAGAACAGTGGCAAATTCCTCCGGAGATACTTTATCCTGGATACCCAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000125466.2 ENSMUST00000128715.8 |
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| CDS CAA 72 bp | ATAAAGTATCTCCGGAGGAATTTGCCACTGTTCTCATaGTCTTCAATATCCAGAAACCCACAGATTCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: IKYLRRNLPLFS*SSISRNPQIRF Trigger: GAACCGAATCTGTGGGTTTCTGGATATTGAAGACAATGAGAACAGTGGCAAATTCCTCCGGAGATACTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064883.14 ENSMUST00000098866.11 ENSMUST00000125466.2 ENSMUST00000128715.8 |
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