Pregenerated sensors for PLEKHA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040268Ensembl transcript IDs: ENSMUST00000048180.12, ENSMUST00000075181.11, ENSMUST00000120441.8, ENSMUST00000126355.2, ENSMUST00000136963.8, ENSMUST00000151119.9
Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATCATCTTTGGCGAGAAGCCTCACGGAAGGACACTGAGGGTGAGTaGCGCAGGCAGCCCACGAGAGCCTCCTCACACATCGCTGACTGG | + |
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Preference number: 1 (lower is better) Translates to: YHLWREASRKDTEGE*RRQPTRASSHIADW Trigger: CCAGTCAGCGATGTGTGAGGAGGCTCTCGTGGGCTGCCTGCGCCACTCACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| 3UTR TCA 90 bp | CTGGCTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGTCTaGGCAAAGCCTGTTCAGTCACTTTGGAAGCTGGCTCTCTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LARHLLPEGRFYSEV*AKPVQSLWKLALLE Trigger: CTCCAAGAGAGCCAGCTTCCAAAGTGACTGAACAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
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| 3UTR CCA 90 bp | AGGTCTGAGCAAAGCCTGTTCAGTCACTTTGGAAGCTGGCTCTCTTaGAGAGACAGTCTGGACCTTGAAGTTCCCTGGCTTGACCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: RSEQSLFSHFGSWLS*RDSLDLEVPWLDLG Trigger: GCCAAGGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAGCCAGCTTCCAAAGTGACTGAACAGGCTTTGCTCAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
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| 3UTR CCA 90 bp | GGAAGCTGGCTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGATTGGTAAACTCCTCGCTTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: GSWLSWRDSLDLEVP*LDLGKRLVNSSLLH Trigger: ATGGAGAAGCGAGGAGTTTACCAATCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAGCCAGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
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| 3UTR TCA 90 bp | CACATTTGCATGAGAGCCCACATACGTGCTGCATTCACCAGCTCTTaGTGTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: HICMRAHIRAAFTSS*CIPLYTRVRQPSGL Trigger: CAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATGCAAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR GCA 90 bp | TACAAGGGTTCGACAGCCTTCTGGCCTGCCGCATCTGGAACACAGTaGAAAGCTAAGATTAGAGTTAACCTATATTGGGAGAGGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: YKGSTAFWPAASGTQ*KAKIRVNLYWEREE Trigger: TTCCTCCCTCTCCCAATATAGGTTAACTCTAATCTTAGCTTTGCACTGTGTTCCAGATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR GCA 90 bp | TTACCGATACCAAAATATGATAAAATGAACGCGCACTGTGGAGGCTaGACCAAAGCAAACAGCGCCAGGCTCATCAATACTGCCAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LPIPKYDKMNAHCGG*TKANSARLINTARV Trigger: GACTCTGGCAGTATTGATGAGCCTGGCGCTGTTTGCTTTGGTGCAGCCTCCACAGTGCGCGTTCATTTTATCATATTTTGGTATCGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR GCA 90 bp | CCTTCTACTAAGAAGGCACATTTGCATGAGAGCCCACATACGTGCTaGATTCACCAGCTCTTGATGTATACCTCTGTATACAAGGGTTCG | + |
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Preference number: 1 (lower is better) Translates to: PSTKKAHLHESPHTC*IHQLLMYTSVYKGS Trigger: CGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATGCAAATGTGCCTTCTTAGTAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR GCA 90 bp | AGGCCTTCTACTAAGAAGGCACATTTGCATGAGAGCCCACATACGTaGTGCATTCACCAGCTCTTGATGTATACCTCTGTATACAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: RPSTKKAHLHESPHT*CIHQLLMYTSVYKG Trigger: ACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATGCAAATGTGCCTTCTTAGTAGAAGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR GCA 90 bp | GAAATAACAATTTTAGCTATAGCTGACCTCCAGTCTCCCCACTTCTaGTTGCCCTGTTCCACTGCCACCTACACCAATCATCTAGTCAAA | + |
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Preference number: 1 (lower is better) Translates to: EITILAIADLQSPHF*LPCSTATYTNHLVK Trigger: TTTGACTAGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGGAGGTCAGCTATAGCTAAAATTGTTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| 3UTR CCA 90 bp | AACTCTGGGCAGTTTATTCTCAAGTCATTACAGTGTTCCACCGACTaGACATACAGAGACAGCAGGGTAACAGTAAACATTAGGAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: NSGQFILKSLQCSTD*TYRDSRVTVNIRRH Trigger: GTGCCTCCTAATGTTTACTGTTACCCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAACTGCCCAGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR GCA 90 bp | CAAGGACAAAGGAAGAAAGTCTCTATTCTTCAGCCACTCAGCTTGTaGATGAACACAATGTGCACAGAAAGCTATGCATGGGACAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: QGQRKKVSILQPLSL*MNTMCTESYAWDKE Trigger: TTCCTTGTCCCATGCATAGCTTTCTGTGCACATTGTGTTCATGCACAAGCTGAGTGGCTGAAGAATAGAGACTTTCTTCCTTTGTCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR CCA 90 bp | TATGTCACTCTGTTTGCACTCCTGGACTTTGTGCACTTCTTTAAGTaGTATCACCCGCAGAGGTTCCTTCTCCTGAAATCATTATTGGCA | + |
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Preference number: 1 (lower is better) Translates to: YVTLFALLDFVHFFK*YHPQRFLLLKSLLA Trigger: TGCCAATAATGATTTCAGGAGAAGGAACCTCTGCGGGTGATACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAAACAGAGTGACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
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| 3UTR TCA 90 bp | TTGTGCACTTCTTTAAGTGGTATCACCCGCAGAGGTTCCTTCTCCTaGAATCATTATTGGCATAGCTGCCTGCCAAATGGTGATTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LCTSLSGITRRGSFS*NHYWHSCLPNGDFS Trigger: AGAAAAATCACCATTTGGCAGGCAGCTATGCCAATAATGATTTCAGGAGAAGGAACCTCTGCGGGTGATACCACTTAAAGAAGTGCACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
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| 3UTR GCA 90 bp | GTGCACAGAAAGCTATGCATGGGACAAGGAAGCTCTCAGTTAGGGTaGATTGTTTTTGCAAGTCCAATTGGTATGAAAGTCAACATACAA | + |
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Preference number: 1 (lower is better) Translates to: VHRKLCMGQGSSQLG*IVFASPIGMKVNIQ Trigger: TTGTATGTTGACTTTCATACCAATTGGACTTGCAAAAACAATGCACCCTAACTGAGAGCTTCCTTGTCCCATGCATAGCTTTCTGTGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR GCA 90 bp | GCTATGCATGGGACAAGGAAGCTCTCAGTTAGGGTGCATTGTTTTTaGAAGTCCAATTGGTATGAAAGTCAACATACAAATAATCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: AMHGTRKLSVRVHCF*KSNWYESQHTNNLK Trigger: CTTGAGATTATTTGTATGTTGACTTTCATACCAATTGGACTTGCAAAAACAATGCACCCTAACTGAGAGCTTCCTTGTCCCATGCATAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR CCA 90 bp | AGGTGTAATTTCTCAAAAGGGTTTGCATCTCAGAACAGAGATGAATaGCCAAAGTATTCCGAACCAAACTATTCCTTAGGATGTACTTGG | + |
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Preference number: 1 (lower is better) Translates to: RCNFSKGFASQNRDE*PKYSEPNYSLGCTW Trigger: CCAAGTACATCCTAAGGAATAGTTTGGTTCGGAATACTTTGGCCATTCATCTCTGTTCTGAGATGCAAACCCTTTTGAGAAATTACACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR GCA 90 bp | GTTCTTCAGAGAGGCGCTTCTGTTTATAATATCCCCACTGTTCAATaGATACTCAGATCTGGTTTTCAAGACATAAATATTGCACAGGTA | + |
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Preference number: 1 (lower is better) Translates to: VLQRGASVYNIPTVQ*ILRSGFQDINIAQV Trigger: TACCTGTGCAATATTTATGTCTTGAAAACCAGATCTGAGTATGCATTGAACAGTGGGGATATTATAAACAGAAGCGCCTCTCTGAAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR-3UTR TCA 90 bp | CACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCATCTGGGCCGTTTTTACTCTaGGGTCTGAGCAAAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: HTSLTGRLASSKSTGSPSGPFLL*GLSKAC Trigger: ACAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCC...AGATGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
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| 3UTR-3UTR TCA 90 bp | ACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCATCTTCTGGGCCGTTTTTACTCTaGGGTCTGAGCAAAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TSLTGRLASSKSTGSPSSGPFLL*GLSKAC Trigger: ACAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCC...AGAAGATGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
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| 3UTR-3UTR GCA 90 bp | CATGAGAGCCCACATACGTGCTGCATTCACCAGCTCTTGATGTATACCTCTGTAGCCAGGTCCCCGCTGTaGTACGATGGCGCCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: HESPHTCCIHQLLMYTSVARSPL*YDGARD Trigger: GTCTCTGGCGCCATCGTAGCACAGCGGGGACCTGGC...TACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTCTGGCCTGCCGCATAGAAGAGGATGACCTGCCAGGTCCCCGCTGTGCTAGAGGTTCCTTCTCCTaGAATCATTATTGGCATAGC | + |
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Preference number: 2 (lower is better) Translates to: SLLACRIEEDDLPGPRCARGSFS*NHYWHS Trigger: GCTATGCCAATAATGATTTCAGGAGAAGGAACCTCT...AGCACAGCGGGGACCTGGCAGGTCATCCTCTTCTATGCGGCAGGCCAGAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACCACAAAACAGTACTCGCTCAAACCAGTCTATCACTCAACACCGGAAACCGACACTGAGGGTGAGTaGCGCAGGCAGCCCACGAGA | + |
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Preference number: 2 (lower is better) Translates to: VTTKQYSLKPVYHSTPETDTEGE*RRQPTR Trigger: TCTCGTGGGCTGCCTGCGCCACTCACCCTCAGTGTC...GGTTTCCGGTGTTGAGTGATAGACTGGTTTGAGCGAGTACTGTTTTGTGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR-3UTR GCA 90 bp | TGTATACAAGGGTTCGACAGCCTTCTGGCCTGCCGCATCTGGAACACAGTGCAACAGCCACTCAGCTTGTaGATGAACACAATGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: CIQGFDSLLACRIWNTVQQPLSL*MNTMCT Trigger: TGTGCACATTGTGTTCATGCACAAGCTGAGTGGCTG...TTGCACTGTGTTCCAGATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR CAA 90 bp | GCACATTTGCATGAGAGCCCACATACGTGCTGCATTCACCAGCTCTaGATGTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: AHLHESPHTCCIHQL*MYTSVYKGSTAFWP Trigger: AGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATGCAAATGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCCTCCCCACTTCTGCTTaGCCTGTTCCACTGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: QFILKSLQCSTDWTYRDSLPTSA*PVPLPP Trigger: AGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAG...GCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR-3UTR TCA 90 bp | GTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTGCCGCATCTGGAACTGTACTTGGACAACATaGGTAACACGTGTTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VYLCIQGFDSLLACRIWNCTWTT*VTRVSL Trigger: CAGAGAAACACGTGTTACTCATGTTGTCCAAGTACA...GTTCCAGATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTGGTTTACAGAGAGAATTCAAGGACAGCCATAGCTACATAGAAAAATCCCAGTCTCCCCACTTCTaGTTGCCCTGTTCCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: QPGLQREFKDSHSYIEKSQSPHF*LPCSTA Trigger: GGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTG...GGATTTTTCTATGTAGCTATGGCTGTCCTTGAATTCTCTCTGTAAACCAGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGTATAAATTCTGCAGCACCACAGACCTCATGAGATTAGAAATTTTCATCGACACTGAGGGTGAGTaGCGCAGGCAGCCCACGAGA | + |
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Preference number: 2 (lower is better) Translates to: LQYKFCSTTDLMRLEIFIDTEGE*RRQPTR Trigger: TCTCGTGGGCTGCCTGCGCCACTCACCCTCAGTGTC...GATGAAAATTTCTAATCTCATGAGGTCTGTGGTGCTGCAGAATTTATACTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCCAGTGTTCCACCGACTaGACATACAGAGACAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QFILKSLQCSTDWTYRDSQCSTD*TYRDSR Trigger: CCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTG...GCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCTGGCCTGCCGCATCTGGAACACAGTGCAAAGCTAAGATTAGAGTTAACACAGAAAGCTATGCATaGGACAAGGAAGCTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: AFWPAASGTQCKAKIRVNTESYA*DKEALS Trigger: ACTGAGAGCTTCCTTGTCCCATGCATAGCTTTCTGT...GTTAACTCTAATCTTAGCTTTGCACTGTGTTCCAGATGCGGCAGGCCAGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR CAA 90 bp | GGAAAAGAGAGAATTCTGCTGATAGTAACAGCTGGACAGTCCAATTaGCCCCCACCACAAAGCACAGAACACAAACACCCTTCTCCAACT | + |
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Preference number: 2 (lower is better) Translates to: GKERILLIVTAGQSN*PPPQSTEHKHPSPT Trigger: AGTTGGAGAAGGGTGTTTGTGTTCTGTGCTTTGTGGTGGGGGCAAATTGGACTGTCCAGCTGTTACTATCAGCAGAATTCTCTCTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCATTCACCAGCTCTTGATGTATACCTCTGTATACAAGGGTTCGACAGCCTTGTGCACAGAAAGCTATaGATGGGACAAGGAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LHSPALDVYLCIQGFDSLVHRKL*MGQGSS Trigger: AGAGCTTCCTTGTCCCATGCATAGCTTTCTGTGCAC...AAGGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR-3UTR CCA 90 bp | GTAGTTGACCACCAACATTCTGGTGTCTCTGATATAAAAATGCTATCTCATTTAGACACTGAGGGTGAGTaGCGCAGGCAGCCCACGAGA | + |
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Preference number: 2 (lower is better) Translates to: VVDHQHSGVSDIKMLSHLDTEGE*RRQPTR Trigger: TCTCGTGGGCTGCCTGCGCCACTCACCCTCAGTGTC...TAAATGAGATAGCATTTTTATATCAGAGACACCAGAATGTTGGTGGTCAACTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTACAGAGAGAATTCAAGGACAGCCATAGCTACATAGAAAAATCCAATCTCCTCCTCGCTTCTCCATaGCACAGCCTGAGACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GLQREFKDSHSYIEKSNLLLASP*HSLRPE Trigger: CTCTGGTCTCAGGCTGTGCCATGGAGAAGCGAGGAG...GAGATTGGATTTTTCTATGTAGCTATGGCTGTCCTTGAATTCTCTCTGTAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
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| 3UTR CAA 90 bp | ATAACAATTTTAGCTATAGCTGACCTCCAGTCTCCCCACTTCTGCTaGCCCTGTTCCACTGCCACCTACACCAATCATCTAGTCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: ITILAIADLQSPHFC*PCSTATYTNHLVKS Trigger: AGATTTGACTAGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGGAGGTCAGCTATAGCTAAAATTGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| 3UTR-3UTR GCA 90 bp | TTACAGAGAGAATTCAAGGACAGCCATAGCTACATAGAAAAATCCAATCTCCAACAGTCTCCCCACTTCTaGTTGCCCTGTTCCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: LQREFKDSHSYIEKSNLQQSPHF*LPCSTA Trigger: GGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTG...TTGGAGATTGGATTTTTCTATGTAGCTATGGCTGTCCTTGAATTCTCTCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| 3UTR-3UTR GCA 90 bp | ACTACGGTAAAATACTTTGCGTTAGTGATGACAACTGCAAAAGGCAGTCCGGTTAGCCCACATACGTGCTaGATTCACCAGCTCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: TTVKYFALVMTTAKGSPVSPHTC*IHQLLM Trigger: CATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCT...AACCGGACTGCCTTTTGCAGTTGTCATCACTAACGCAAAGTATTTTACCGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR-3UTR GCA 90 bp | TCGACAGCCTTCTGGCCTGCCGCATCTGGAACACAGTGCAAAGCTAAGATTAGAAGGGTGCATTGTTTTTaGAAGTCCAATTGGTATGAA | + |
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Preference number: 2 (lower is better) Translates to: STAFWPAASGTQCKAKIRRVHCF*KSNWYE Trigger: TTCATACCAATTGGACTTGCAAAAACAATGCACCCT...TCTAATCTTAGCTTTGCACTGTGTTCCAGATGCGGCAGGCCAGAAGGCTGTCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| 3UTR-3UTR CCA 90 bp | GTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGGTAACAGTAAACACCTTGTTGTCCTATaGTTTTCTGATGCAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VITVFHRLDIQRQQGNSKHLVVL*FSDAGA Trigger: TGCACCTGCATCAGAAAACCATAGGACAACAAGGTG...TTTACTGTTACCCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCCAGGCTGCAAGTTGGTaGCATAACCCTATAATTTGG | + |
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Preference number: 2 (lower is better) Translates to: QFILKSLQCSTDWTYRDSQAASW*HNPIIW Trigger: CCAAATTATAGGGTTATGTCACCAACTTGCAGCCTG...GCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR-3UTR GCA 90 bp | GTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGGTAACAGTAAAAGGCAGTATGACATATaGACTGAGATCATTCACCCT | + |
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Preference number: 2 (lower is better) Translates to: VITVFHRLDIQRQQGNSKRQYDI*TEIIHP Trigger: AGGGTGAATGATCTCAGTGCATATGTCATACTGCCT...TTTACTGTTACCCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGGCATAGCTGCCTGCCAAATGGTGATTTTTCTAACATCATTCACCTACACATCCACTTATTTTCTCTaGGGACAGTGGGTATGGGAG | + |
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Preference number: 2 (lower is better) Translates to: IGIAACQMVIFLTSFTYTSTYFL*GQWVWE Trigger: CTCCCATACCCACTGTCCTCAGAGAAAATAAGTGGA...TGTGTAGGTGAATGATGTTAGAAAAATCACCATTTGGCAGGCAGCTATGCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGCAGTATGACATATaGACTGAGATCATTCACCCT | + |
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Preference number: 2 (lower is better) Translates to: QFILKSLQCSTDWTYRDSRQYDI*TEIIHP Trigger: AGGGTGAATGATCTCAGTGCATATGTCATACTGCCT...GCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAATTTTCATCTGGGAATGGCCCACTTGATAATTTTAGCTGATAAGAATGTGGGGCCGTTTTTACTCTaGGGTCTGAGCAAAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RNFHLGMAHLIILADKNVGPFLL*GLSKAC Trigger: ACAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCC...CACATTCTTATCAGCTAAAATTATCAAGTGGGCCATTCCCAGATGAAAATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACACCTAAGATGTCACCACAAAACAGTACTCGCTCAAACCAGTCTATCACTCTTGCAGTATAAATTCTaGAGCACCACAGACCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: KHLRCHHKTVLAQTSLSLLQYKF*STTDLM Trigger: CATGAGGTCTGTGGTGCTGCAGAATTTATACTGCAA...GAGTGATAGACTGGTTTGAGCGAGTACTGTTTTGTGGTGACATCTTAGGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCATCCCCACTGTTCAATaGATACTCAGATCTGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: QFILKSLQCSTDWTYRDSIPTVQ*ILRSGF Trigger: AAAACCAGATCTGAGTATGCATTGAACAGTGGGGAT...GCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR-3UTR GCA 90 bp | CACGTGTTTCTCTGGCAATGTCCAAGCAAAGCGTTCAGTTGTTTCACTATTACTTGCATGAACACAATGTaGACAGAAAGCTATGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: HVFLWQCPSKAFSCFTITCMNTM*TESYAW Trigger: CCATGCATAGCTTTCTGTGCACATTGTGTTCATGCA...AGTAATAGTGAAACAACTGAACGCTTTGCTTGGACATTGCCAGAGAAACACGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR-3UTR CCA 90 bp | AGATCTGGTTTTCAAGACATAAATATTGCACAGGTAGTTGACCACCAACATTCTGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RSGFQDINIAQVVDHQHSDLEVP*LDLGKR Trigger: TCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTC...AGAATGTTGGTGGTCAACTACCTGTGCAATATTTATGTCTTGAAAACCAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGCTAAACAGTCCACATTaGAGTATAAATTCTGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: FILKSLQCSTDWTYRDSRLNSPH*SINSAA Trigger: TGCTGCAGAATTTATACTGCAATGTGGACTGTTTAG...CCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAACAGAGATGAATGGCCAAAGTATTCCGAACCAAACTATTCCTTAGGATGTAAGAAAGAAAGAAACTaGAGGATTAGGGGAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QNRDEWPKYSEPNYSLGCKKERN*RIRGEE Trigger: TTCCTCTCCCCTAATCCTTCAGTTTCTTTCTTTCTT...ACATCCTAAGGAATAGTTTGGTTCGGAATACTTTGGCCATTCATCTCTGTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCACATTGCAGTATAAATTCTGCAGCACCACAGACCTCATGAGATTAGAAATTTTGCAGTATAAATTCTaGAGCACCACAGACCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: STLQYKFCSTTDLMRLEILQYKF*STTDLM Trigger: CATGAGGTCTGTGGTGCTGCAGAATTTATACTGCAA...AATTTCTAATCTCATGAGGTCTGTGGTGCTGCAGAATTTATACTGCAATGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAAATTTTCATCTGGGAATGGCCCACTTGATAATTTTAGCTGATAAGAATGTGTTTTACTCTGAGGTCTaGGCAAAGCCTGTTCAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RNFHLGMAHLIILADKNVFYSEV*AKPVQS Trigger: TGACTGAACAGGCTTTGCTCAGACCTCAGAGTAAAA...CACATTCTTATCAGCTAAAATTATCAAGTGGGCCATTCCCAGATGAAAATTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGAGAATTCAAGGACAGCCATAGCTACATAGAAAAATCCAATCTCCAAAATAGGCAGTATGACATATaGACTGAGATCATTCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: QREFKDSHSYIEKSNLQNRQYDI*TEIIHP Trigger: AGGGTGAATGATCTCAGTGCATATGTCATACTGCCT...ATTTTGGAGATTGGATTTTTCTATGTAGCTATGGCTGTCCTTGAATTCTCTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATGGCCCACTTGATAATTTTCAAACAGTCACTATaGACACAGCTTTTCTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HRPHEIRNFHLGMAHLIIFKQSL*TQLFSF Trigger: GAAGGAGAAAAGCTGTGTCCATAGTGACTGTTTGAA...AATTATCAAGTGGGCCATTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAAATTCTGCAGCACCACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATTCAAACAGTCACTATaGACACAGCTTTTCTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: YKFCSTTDLMRLEIFIWEFKQSL*TQLFSF Trigger: GAAGGAGAAAAGCTGTGTCCATAGTGACTGTTTGAA...TTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTGGTGCTGCAGAATTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGAGAATTCAAGGACAGCCATAGCTACATAGAAAAATCCAATCTCCAAAATCTAAACAGTCCACATTaGAGTATAAATTCTGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QREFKDSHSYIEKSNLQNLNSPH*SINSAA Trigger: TGCTGCAGAATTTATACTGCAATGTGGACTGTTTAG...ATTTTGGAGATTGGATTTTTCTATGTAGCTATGGCTGTCCTTGAATTCTCTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR TCA 72 bp | GCGCAGGCAGCCCACGAGAGCCTCCTCACACATCGCTaGCTGGCAGGCTGGCGTCATCTAAGTCCACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AQAAHESLLTHR*LAGWRHLSPLA Trigger: AGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTGAGGAGGCTCTCGTGGGCTGCCTGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR CCA 72 bp | TGGCGAGAAGCCTCACGGAAGGACACTGAGGGTGAGTaGCGCAGGCAGCCCACGAGAGCCTCCTCACACATC | + |
|
Preference number: 3 (lower is better) Translates to: WREASRKDTEGE*RRQPTRASSHI Trigger: GATGTGTGAGGAGGCTCTCGTGGGCTGCCTGCGCCACTCACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR GCA 72 bp | TACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTaGCGCATAGAAGAGGATGACCTGCCAGGTCCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: YLCIQGFDSLLA*RIEEDDLPGPR Trigger: GCGGGGACCTGGCAGGTCATCCTCTTCTATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
||
| 3UTR GCA 72 bp | GCCAGGTCCCCGCTGTGCTACGATGGCGCCAGAGACTaGTTTAATCCAACTGTGCATCTCTTCAGGGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: ARSPLCYDGARD*FNPTVHLFRAI Trigger: GATAGCCCTGAAGAGATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATCGTAGCACAGCGGGGACCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTGCCGCATCTGGAACGCTGGACAGTCCAATTaGCCCCCACCACAAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VYLCIQGFDSLLACRIWNAGQSN*PPPQST Trigger: TGTGCTTTGTGGTGGGGGCAAATTGGACTGTCCAGC...GTTCCAGATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCGACTGGACATACAGAGACAGCAGGGTAACAGTAAACATTAGGAGGCACATTTCTCCCCACTTCTGCTaGCCCTGTTCCACTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: TDWTYRDSRVTVNIRRHISPHFC*PCSTAT Trigger: GGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGA...AATGTGCCTCCTAATGTTTACTGTTACCCTGCTGTCTCTGTATGTCCAGTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTACCACTCCCTAAATCCTaGGTTTGCCAACTTAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QSPHFCLPCSTATYTNHLPLPKS*VCQLRV Trigger: GACTCTAAGTTGGCAAACCAAGGATTTAGGGAGTGG...TAGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR TCA 72 bp | CATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGTCTaGGCAAAGCCTGTTCAGTCACTTTGGAAGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLLPEGRFYSEV*AKPVQSLWKLA Trigger: AGCCAGCTTCCAAAGTGACTGAACAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCCTCAGGGAGAAGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| 3UTR GCA 72 bp | CCTCCAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTaGCACCTACACCAATCATCTAGTCAAATCTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: PPVSPLLLALFH*HLHQSSSQIYA Trigger: TGCATAGATTTGACTAGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTGCCGCATCTGGAACTATGGCACAGGACAGTaGACAACAGGGCTACTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VYLCIQGFDSLLACRIWNYGTGQ*TTGLLL Trigger: TAAAAGTAGCCCTGTTGTCAACTGTCCTGTGCCATA...GTTCCAGATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR GCA 72 bp | ATTTTAGCTATAGCTGACCTCCAGTCTCCCCACTTCTaGTTGCCCTGTTCCACTGCCACCTACACCAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: ILAIADLQSPHF*LPCSTATYTNH Trigger: ATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGGAGGTCAGCTATAGCTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR CCA 72 bp | ACATATGCACTGAGATCATTCACCCTCTATCATCTTTaGCGAGAAGCCTCACGGAAGGACACTGAGGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TYALRSFTLYHL*REASRKDTEGE Trigger: CTCACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGATAGAGGGTGAATGATCTCAGTGCATATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAAGGCAGTATGACATATGCACTGAGATCATTCACCCTCTATCATCTTTGGGAGACAGTCTGGACCTaGAAGTTCCCTGGCTTGACC | + |
|
Preference number: 3 (lower is better) Translates to: PQGSMTYALRSFTLYHLWETVWT*KFPGLT Trigger: GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTC...CCAAAGATGATAGAGGGTGAATGATCTCAGTGCATATGTCATACTGCCTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGCCCACATACGTGCTGCATTCACCAGCTCTTGATGTATACCTCTGTATACCTTCAGCCACTCAGCTaGTGCATGAACACAATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ESPHTCCIHQLLMYTSVYLQPLS*CMNTMC Trigger: GCACATTGTGTTCATGCACAAGCTGAGTGGCTGAAG...GTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR TCA 72 bp | ATGAGAGCCCACATACGTGCTGCATTCACCAGCTCTTaGTGTATACCTCTGTATACAAGGGTTCGACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: MRAHIRAAFTSS*CIPLYTRVRQP Trigger: AGGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136963.8 ENSMUST00000151119.9 |
||
| 3UTR GCA 72 bp | TCGACAGCCTTCTGGCCTGCCGCATCTGGAACACAGTaGAAAGCTAAGATTAGAGTTAACCTATATTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: STAFWPAASGTQ*KAKIRVNLYWE Trigger: CTCCCAATATAGGTTAACTCTAATCTTAGCTTTGCACTGTGTTCCAGATGCGGCAGGCCAGAAGGCTGTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR CCA 72 bp | GGGAGGAAAAGAGAGAATTCTGCTGATAGTAACAGCTaGACAGTCCAATTTGCCCCCACCACAAAGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRKRENSADSNS*TVQFAPTTKHR Trigger: TCTGTGCTTTGTGGTGGGGGCAAATTGGACTGTCCAGCTGTTACTATCAGCAGAATTCTCTCTTTTCCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGGTAACAGTAAACCACTCCCTAAATCCTaGGTTTGCCAACTTAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VITVFHRLDIQRQQGNSKPLPKS*VCQLRV Trigger: GACTCTAAGTTGGCAAACCAAGGATTTAGGGAGTGG...TTTACTGTTACCCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAAGGCAGTATGACATATGCACTGAGATCATTCACCCTCTATCATCTTTGGGACCTTGGCAAGAGATaGGTAAACTCCTCGCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQGSMTYALRSFTLYHLWDLGKR*VNSSLL Trigger: GAGAAGCGAGGAGTTTACCAATCTCTTGCCAAGGTC...CCAAAGATGATAGAGGGTGAATGATCTCAGTGCATATGTCATACTGCCTTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGAGAGCCCACATACGTGCTGCATTCACCAGCTCTTGATGTATACCTCTGTATTGCACTCCTGGACTTaGTGCACTTCTTTAAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HESPHTCCIHQLLMYTSVLHSWT*CTSLSG Trigger: ACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAA...TACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGCCCACATACGTGCTGCATTCACCAGCTCTTGATGTATACCTCTGTATACATTATGTCACTCTGTTaGCACTCCTGGACTTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ESPHTCCIHQLLMYTSVYIMSLC*HSWTLC Trigger: GCACAAAGTCCAGGAGTGCAAACAGAGTGACATAAT...GTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
||
| 3UTR GCA 72 bp | CCAAAATATGATAAAATGAACGCGCACTGTGGAGGCTaGACCAAAGCAAACAGCGCCAGGCTCATCAATACT | + |
|
Preference number: 3 (lower is better) Translates to: PKYDKMNAHCGG*TKANSARLINT Trigger: AGTATTGATGAGCCTGGCGCTGTTTGCTTTGGTGCAGCCTCCACAGTGCGCGTTCATTTTATCATATTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR CCA 72 bp | CTGTTTGCACTCCTGGACTTTGTGCACTTCTTTAAGTaGTATCACCCGCAGAGGTTCCTTCTCCTGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: LFALLDFVHFFK*YHPQRFLLLKS Trigger: TGATTTCAGGAGAAGGAACCTCTGCGGGTGATACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
||
| 3UTR CCA 72 bp | CAAAACCGTGTTTTGGTAGAACTGAAAGTCCTTGAATaGTCAGGCCAGTGCCATACCAAGAGTGTCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QNRVLVELKVLE*SGQCHTKSVKL Trigger: CAGCTTGACACTCTTGGTATGGCACTGGCCTGACCATTCAAGGACTTTCAGTTCTACCAAAACACGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR-3UTR CAA 90 bp | TCGACAGCCTTCTGGCCTGCCGCATCTGGAACACAGTGCAAAGCTAAGATTAGACAACAGACATTGTTTTaGCAGAGAATCTCATACTTG | + |
|
Preference number: 3 (lower is better) Translates to: STAFWPAASGTQCKAKIRQQTLF*QRISYL Trigger: CAAGTATGAGATTCTCTGCAAAAACAATGTCTGTTG...TCTAATCTTAGCTTTGCACTGTGTTCCAGATGCGGCAGGCCAGAAGGCTGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR TCA 72 bp | TCTTTAAGTGGTATCACCCGCAGAGGTTCCTTCTCCTaGAATCATTATTGGCATAGCTGCCTGCCAAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLSGITRRGSFS*NHYWHSCLPNG Trigger: ACCATTTGGCAGGCAGCTATGCCAATAATGATTTCAGGAGAAGGAACCTCTGCGGGTGATACCACTTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
||
| 3UTR GCA 72 bp | AAGAAGGCACATTTGCATGAGAGCCCACATACGTGCTaGATTCACCAGCTCTTGATGTATACCTCTGTATAC | + |
|
Preference number: 3 (lower is better) Translates to: KKAHLHESPHTC*IHQLLMYTSVY Trigger: GTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATGCAAATGTGCCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR GCA 72 bp | ACTAAGAAGGCACATTTGCATGAGAGCCCACATACGTaGTGCATTCACCAGCTCTTGATGTATACCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TKKAHLHESPHT*CIHQLLMYTSV Trigger: TACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATGCAAATGTGCCTTCTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATCTCATTTAACCTATCAAACTACGCTACTGAAATTAGTTTTCCCGGACATTTGGAAGCTGGCTCTCTaGGAGAGACAGTCTGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: LSHLTYQTTLLKLVFPDIWKLAL*ERQSGP Trigger: AGGTCCAGACTGTCTCTCCAAGAGAGCCAGCTTCCA...AATGTCCGGGAAAACTAATTTCAGTAGCGTAGTTTGATAGGTTAAATGAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| 3UTR TCA 72 bp | AGCCAATCATGTAGGACTTTGGGGTACAATCCTAAGTaGGATGAGAAGACACAGGCACTTGAGTATAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SQSCRTLGYNPK*DEKTQALEYRL Trigger: TAACCTATACTCAAGTGCCTGTGTCTTCTCATCTCACTTAGGATTGTACCCCAAAGTCCTACATGATTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR TCA 72 bp | ATTACAAAACCGTGTTTTGGTAGAACTGAAAGTCCTTaGATGGTCAGGCCAGTGCCATACCAAGAGTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ITKPCFGRTESP*MVRPVPYQECQ Trigger: TTGACACTCTTGGTATGGCACTGGCCTGACCATTCAAGGACTTTCAGTTCTACCAAAACACGGTTTTGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR TCA 72 bp | CACAGCTTTTCTCCTTCCTTTCTTAAAGAATTATGTTaGCTAGGCCACTCCCTAAATCCTTGGTTTGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: HSFSPSFLKELC*LGHSLNPWFAN Trigger: GTTGGCAAACCAAGGATTTAGGGAGTGGCCTAGTCAACATAATTCTTTAAGAAAGGAAGGAGAAAAGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR TCA 72 bp | GAACCAAACTATTCCTTAGGATGTACTTGGACAACATaGGTAACACGTGTTTCTCTGGCAATGTCCAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: EPNYSLGCTWTT*VTRVSLAMSKQ Trigger: TTGCTTGGACATTGCCAGAGAAACACGTGTTACTCATGTTGTCCAAGTACATCCTAAGGAATAGTTTGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR CCA 72 bp | CAGTTTATTCTCAAGTCATTACAGTGTTCCACCGACTaGACATACAGAGACAGCAGGGTAACAGTAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: QFILKSLQCSTD*TYRDSRVTVNI Trigger: AATGTTTACTGTTACCCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR GCA 72 bp | GGGACAAGGAAGCTCTCAGTTAGGGTGCATTGTTTTTaGAAGTCCAATTGGTATGAAAGTCAACATACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GTRKLSVRVHCF*KSNWYESQHTN Trigger: ATTTGTATGTTGACTTTCATACCAATTGGACTTGCAAAAACAATGCACCCTAACTGAGAGCTTCCTTGTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR CCA 72 bp | TTCTCAAAAGGGTTTGCATCTCAGAACAGAGATGAATaGCCAAAGTATTCCGAACCAAACTATTCCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FSKGFASQNRDE*PKYSEPNYSLG Trigger: TCCTAAGGAATAGTTTGGTTCGGAATACTTTGGCCATTCATCTCTGTTCTGAGATGCAAACCCTTTTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTACAGAGAGAATTCAAGGACAGCCATAGCTACATAGAAAAATCCAATCTCTCTAAACAGTCCACATaGCAGTATAAATTCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GLQREFKDSHSYIEKSNLSKQST*QYKFCS Trigger: GCTGCAGAATTTATACTGCAATGTGGACTGTTTAGA...GAGATTGGATTTTTCTATGTAGCTATGGCTGTCCTTGAATTCTCTCTGTAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR CCA 72 bp | GGTATATATAGAATCTACATCATAAAGGCTATGGTATaGCACAGGACAGTTGACAACAGGGCTACTTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GIYRIYIIKAMV*HRTVDNRATFK Trigger: CTTAAAAGTAGCCCTGTTGTCAACTGTCCTGTGCCATACCATAGCCTTTATGATGTAGATTCTATATATACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTTGACCACCAACATTCTGGTGTCTCTGATATAAAAATGCTATCTCATTTACTGGGAATGGCCCACTaGATAATTTTAGCTGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: VVDHQHSGVSDIKMLSHLLGMAH*IILADK Trigger: CTTATCAGCTAAAATTATCAAGTGGGCCATTCCCAG...TAAATGAGATAGCATTTTTATATCAGAGACACCAGAATGTTGGTGGTCAACTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR-3UTR CAA 90 bp | TATAAATTCTGCAGCACCACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATCTAAACAGTCCACATaGCAGTATAAATTCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: YKFCSTTDLMRLEIFIWESKQST*QYKFCS Trigger: GCTGCAGAATTTATACTGCAATGTGGACTGTTTAGA...TTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTGGTGCTGCAGAATTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR TCA 72 bp | AATATATCAAATTACCGATACCAAAATATGATAAAATaGACGCGCACTGTGGAGGCTGCACCAAAGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: NISNYRYQNMIK*TRTVEAAPKQT Trigger: TGTTTGCTTTGGTGCAGCCTCCACAGTGCGCGTTCATTTTATCATATTTTGGTATCGGTAATTTGATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| 3UTR GCA 72 bp | AGAGGCGCTTCTGTTTATAATATCCCCACTGTTCAATaGATACTCAGATCTGGTTTTCAAGACATAAATATT | + |
|
Preference number: 3 (lower is better) Translates to: RGASVYNIPTVQ*ILRSGFQDINI Trigger: AATATTTATGTCTTGAAAACCAGATCTGAGTATGCATTGAACAGTGGGGATATTATAAACAGAAGCGCCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | CGGAAGGACACTGAGGGTGAGTGGCGCAGGCAGCCCACGAGAGCCTCCTCACACGCCAGGTCCCCGCTGTaGTACGATGGCGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKDTEGEWRRQPTRASSHARSPL*YDGARD Trigger: GTCTCTGGCGCCATCGTAGCACAGCGGGGACCTGGC...GTGTGAGGAGGCTCTCGTGGGCTGCCTGCGCCACTCACCCTCAGTGTCCTTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR CAA 72 bp | GCGGTGGCTGCGGCCCCGGCAGGACGGACAGTGAATTaGGGTTCTGAAGGCCAGCCGGAATGCTCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AVAAAPAGRTVN*GSEGQPECSFY Trigger: ATAGAAGGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCGTCCTGCCGGGGCCGCAGCCACCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCTCCTCACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCCTCCTCGCTTCTCCATaGCACAGCCTGAGACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPPHTSLTGRLASSKSTGLLASP*HSLRPE Trigger: CTCTGGTCTCAGGCTGTGCCATGGAGAAGCGAGGAG...GCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTGAGGAGGCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000126355.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGTCTGAGCAAAGCCTCCATGGCACAGCCTaGGACCAGAGAGTGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: WLAIFSLRAVFTLRSEQSLHGTA*DQRVAA Trigger: CGCAGCCACTCTCTGGTCTCAGGCTGTGCCATGGAG...GCTTTGCTCAGACCTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | CGGAAGGACACTGAGGGTGAGTGGCGCAGGCAGCCCACGAGAGCCTCCTCACACGATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKDTEGEWRRQPTRASSHDGARD*FNPTVH Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATC...GTGTGAGGAGGCTCTCGTGGGCTGCCTGCGCCACTCACCCTCAGTGTCCTTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | CATCTAAGTCCACTGGCTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGCCAGGTCCCCGCTGTaGTACGATGGCGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLSPLARHLLPEGRFYSEARSPL*YDGARD Trigger: GTCTCTGGCGCCATCGTAGCACAGCGGGGACCTGGC...CTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAGCCAGTGGACTTAGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCATCTTCTCCCTGAGGGCCGTCCGGAATGCTCGTGCTaGATTCACCAGCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AGWRHLSPLARHLLPEGRPECSC*IHQLLM Trigger: CATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGG...ACGGCCCTCAGGGAGAAGATGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | ACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCATCTTCTGACAGCCTTCTGGCCTaGCGCATAGAAGAGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSLTGRLASSKSTGSPSSDSLLA*RIEEDD Trigger: GTCATCCTCTTCTATGCGGCAGGCCAGAAGGCTGTC...AGAAGATGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCACCACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATGGCCCACGCCAGGTCCCCGCTGTaGTACGATGGCGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQHHRPHEIRNFHLGMAHARSPL*YDGARD Trigger: GTCTCTGGCGCCATCGTAGCACAGCGGGGACCTGGC...GTGGGCCATTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTGGTGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGCCCACATACGTGCTGCATTCACCAGCTCTTGATGTATACCTCTGTATACGCCAGGTCCCCGCTGTaGTACGATGGCGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ESPHTCCIHQLLMYTSVYARSPL*YDGARD Trigger: GTCTCTGGCGCCATCGTAGCACAGCGGGGACCTGGC...GTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR CCA 90 bp | CACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCATCTGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTSLTGRLASSKSTGSPSDLEVP*LDLGKR Trigger: TCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTC...AGATGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | CACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCATCTGATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HTSLTGRLASSKSTGSPSDGARD*FNPTVH Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATC...AGATGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | CATCTAAGTCCACTGGCTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGACAGCCTTCTGGCCTaGCGCATAGAAGAGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLSPLARHLLPEGRFYSEDSLLA*RIEEDD Trigger: GTCATCCTCTTCTATGCGGCAGGCCAGAAGGCTGTC...CTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAGCCAGTGGACTTAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTGGAAGCTGGCTCTCTTaGAGAGACAGTCTGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVSPLLLALFHCHLHQSSGSWLS*RDSLDL Trigger: AAGGTCCAGACTGTCTCTCCAAGAGAGCCAGCTTCC...AGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
||
| CDS-3UTR CCA 90 bp | TGGCTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGTCTGAGCAAAGCGGAAGCTGGCTCTCTTaGAGAGACAGTCTGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLAIFSLRAVFTLRSEQSGSWLS*RDSLDL Trigger: AAGGTCCAGACTGTCTCTCCAAGAGAGCCAGCTTCC...GCTTTGCTCAGACCTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000126355.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCTCCTCACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCCTCTGGTATCCAGGATaGAATACCGTCGAAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: EPPHTSLTGRLASSKSTGLWYPG*NTVEEI Trigger: AATTTCTTCGACGGTATTTCATCCTGGATACCAGAG...GCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTGAGGAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | CCTCACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCACTCTGGTATCCAGGATaGAATACCGTCGAAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: PHTSLTGRLASSKSTGSPLWYPG*NTVEEI Trigger: AATTTCTTCGACGGTATTTCATCCTGGATACCAGAG...TGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | ATCATCTTTGGCGAGAAGCCTCACGGAAGGACACTGAGGGTGAGTGGCGCAGGCGGCTGTGAGTCTGACTaGTTTGGTACCTTTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IIFGEKPHGRTLRVSGAGGCESD*FGTFEM Trigger: CATTTCAAAGGTACCAAAGCAGTCAGACTCACAGCC...GCCTGCGCCACTCACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| CDS-3UTR GCA 90 bp | GAGCCTCCTCACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: EPPHTSLTGRLASSKSTGALIQL*ISSGLS Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...GCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTGAGGAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | CTCTATCATCTTTGGCGAGAAGCCTCACGGAAGGACACTGAGGGTGAGTGGCGCGATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYHLWREASRKDTEGEWRDGARD*FNPTVH Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATC...GCGCCACTCACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGATAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGGCCAGGTCCCCGCTGTaGTACGATGGCGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FILKSLQCSTDWTYRDSRARSPL*YDGARD Trigger: GTCTCTGGCGCCATCGTAGCACAGCGGGGACCTGGC...CCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | CTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGTCTGAGCAAAGCCTGAGCCCACATACGTGCTaGATTCACCAGCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LAIFSLRAVFTLRSEQSLSPHTC*IHQLLM Trigger: CATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCT...CAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVSPLLLALFHCHLHQSSDLEVP*LDLGKR Trigger: TCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTC...AGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
||
| 3UTR CAA 72 bp | CGGCAGCAGAGGGGTGATAACTGCCTAGCCACCTTGTaGTCCTATGGTTTTCTGATGCAGGTGCACAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQQRGDNCLATL*SYGFLMQVHKR Trigger: TCTCTTGTGCACCTGCATCAGAAAACCATAGGACAACAAGGTGGCTAGGCAGTTATCACCCCTCTGCTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | TCTATCATCTTTGGCGAGAAGCCTCACGGAAGGACACTGAGGGTGAGTGGCGCATTTACTTCTTCTTTCTaGGTCGGCGTGATGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIIFGEKPHGRTLRVSGAFTSSF*VGVMMG Trigger: GCCCATCATCACGCCGACGCAGAAAGAAGAAGTAAA...TGCGCCACTCACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGATAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTGTGCACTTCTTTAAGTaGTATCACCCGCAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVSPLLLALFHCHLHQSSVHFFK*YHPQRF Trigger: GAACCTCTGCGGGTGATACCACTTAAAGAAGTGCAC...AGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTAGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSPHFCLPCSTATYTNHLDLEVP*LDLGKR Trigger: TCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTC...TAGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCACCACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATGGCCCACGACAGCCTTCTGGCCTaGCGCATAGAAGAGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQHHRPHEIRNFHLGMAHDSLLA*RIEEDD Trigger: GTCATCCTCTTCTATGCGGCAGGCCAGAAGGCTGTC...GTGGGCCATTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTGGTGCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCCGTTTTTACTCTGAGGTCTGAGCAAAGCCTGTTCAGTCACTTTGGAAGCGAGAGCCCACATACGTaGTGCATTCACCAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAVFTLRSEQSLFSHFGSESPHT*CIHQLL Trigger: CAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTC...GCTTCCAAAGTGACTGAACAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| 3UTR CAA 72 bp | TTAGCTATAGCTGACCTCCAGTCTCCCCACTTCTGCTaGCCCTGTTCCACTGCCACCTACACCAATCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LAIADLQSPHFC*PCSTATYTNHL Trigger: TAGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGGAGGTCAGCTATAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| 3UTR CAA 72 bp | ATACGGCAGCAGAGGGGTGATAACTGCCTAGCCACCTaGTTGTCCTATGGTTTTCTGATGCAGGTGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: IRQQRGDNCLAT*LSYGFLMQVHK Trigger: CTTGTGCACCTGCATCAGAAAACCATAGGACAACAAGGTGGCTAGGCAGTTATCACCCCTCTGCTGCCGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | CTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGTCTGAGCAAAGCCTGGCATTCACCAGCTCTTaGTGTATACCTCTGTATACA | + |
|
Preference number: 4 (lower is better) Translates to: LAIFSLRAVFTLRSEQSLAFTSS*CIPLYT Trigger: TGTATACAGAGGTATACATCAAGAGCTGGTGAATGC...CAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120441.8 ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | GGCCACTCCCTAAATCCTTGGTTTGCCAACTTAGAGTCCACCCACAAGGCAGTATTTACTTCTTCTTTCTaGGTCGGCGTGATGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHSLNPWFANLESTHKAVFTSSF*VGVMMG Trigger: GCCCATCATCACGCCGACGCAGAAAGAAGAAGTAAA...TACTGCCTTGTGGGTGGACTCTAAGTTGGCAAACCAAGGATTTAGGGAGTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | TCTATCATCTTTGGCGAGAAGCCTCACGGAAGGACACTGAGGGTGAGTGGCGCATTATGTCACTCTGTTTaGACTCCTGGACTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIIFGEKPHGRTLRVSGALCHSV*TPGLCA Trigger: TGCACAAAGTCCAGGAGTGCAAACAGAGTGACATAA...TGCGCCACTCACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | CTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGTCTGAGCAAAGCCTGTTATGTCACTCTGTTTaGACTCCTGGACTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAIFSLRAVFTLRSEQSLLCHSV*TPGLCA Trigger: TGCACAAAGTCCAGGAGTGCAAACAGAGTGACATAA...CAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | CATCTAAGTCCACTGGCTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGCTAAGAAGGCACATTTaGATGAGAGCCCACATACGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSPLARHLLPEGRFYSELRRHI*MRAHIR Trigger: ACGTATGTGGGCTCTCATGCAAATGTGCCTTCTTAG...CTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAGCCAGTGGACTTAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCCTCCTCGCTTCTCCATaGCACAGCCTGAGACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFILKSLQCSTDWTYRDSLLASP*HSLRPE Trigger: CTCTGGTCTCAGGCTGTGCCATGGAGAAGCGAGGAG...GCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| 3UTR CAA 72 bp | CATGAGAGCCCACATACGTGCTGCATTCACCAGCTCTaGATGTATACCTCTGTATACAAGGGTTCGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HESPHTCCIHQL*MYTSVYKGSTA Trigger: GGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136963.8 ENSMUST00000151119.9 |
||
| CDS-3UTR TCA 90 bp | GTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTGCCGCATCTGGAACCTCTGGTATCCAGGATaGAATACCGTCGAAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: VYLCIQGFDSLLACRIWNLWYPG*NTVEEI Trigger: AATTTCTTCGACGGTATTTCATCCTGGATACCAGAG...GTTCCAGATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR GCA 90 bp | GCCTTCTGGCCTGCCGCATCTGGAACACAGTGCAAAGCTAAGATTAGAGTTAACTTTACTTCTTCTTTCTaGGTCGGCGTGATGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFWPAASGTQCKAKIRVNFTSSF*VGVMMG Trigger: GCCCATCATCACGCCGACGCAGAAAGAAGAAGTAAA...GTTAACTCTAATCTTAGCTTTGCACTGTGTTCCAGATGCGGCAGGCCAGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR GCA 90 bp | CATCTAAGTCCACTGGCTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: HLSPLARHLLPEGRFYSEALIQL*ISSGLS Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...CTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAGCCAGTGGACTTAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCGAAGGCCAGCCGGAATaGTCAGAAGAGGATGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFILKSLQCSTDWTYRDSEGQPE*SEEDDL Trigger: CAGGTCATCCTCTTCTGAGCATTCCGGCTGGCCTTC...GCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| CDS-3UTR CCA 90 bp | CACCACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATGGCCCACTTGATACTCCTCGCTTCTCCATaGCACAGCCTGAGACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HHRPHEIRNFHLGMAHLILLASP*HSLRPE Trigger: CTCTGGTCTCAGGCTGTGCCATGGAGAAGCGAGGAG...TATCAAGTGGGCCATTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
||
| CDS-3UTR TCA 90 bp | CATATAAAGCTTCAAACAGTCACTATGGACACAGCTTTTCTCCTTCCTTTCTTACTCCATGGCACAGCCTaGGACCAGAGAGTGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HIKLQTVTMDTAFLLPFLLHGTA*DQRVAA Trigger: CGCAGCCACTCTCTGGTCTCAGGCTGTGCCATGGAG...TAAGAAAGGAAGGAGAAAAGCTGTGTCCATAGTGACTGTTTGAAGCTTTATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGAATTCAAGGACAGCCATAGCTACATAGAAAAATCCAATCTCCAAAATCTCCATGGCACAGCCTaGGACCAGAGAGTGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QREFKDSHSYIEKSNLQNLHGTA*DQRVAA Trigger: CGCAGCCACTCTCTGGTCTCAGGCTGTGCCATGGAG...ATTTTGGAGATTGGATTTTTCTATGTAGCTATGGCTGTCCTTGAATTCTCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
||
| CDS-3UTR GCA 90 bp | TCATTCACCCTCTATCATCTTTGGCGAGAAGCCTCACGGAAGGACACTGAGGGTGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: SFTLYHLWREASRKDTEGALIQL*ISSGLS Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...ACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGATAGAGGGTGAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | GCACATTTGCATGAGAGCCCACATACGTGCTGCATTCACCAGCTCTTGATGTATGATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHLHESPHTCCIHQLLMYDGARD*FNPTVH Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATC...ATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATGCAAATGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR GCA 90 bp | GCCTTCTGGCCTGCCGCATCTGGAACACAGTGCAAAGCTAAGATTAGAGTTAACGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFWPAASGTQCKAKIRVNALIQL*ISSGLS Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...GTTAACTCTAATCTTAGCTTTGCACTGTGTTCCAGATGCGGCAGGCCAGAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR GCA 90 bp | TCATTCACCCTCTATCATCTTTGGCGAGAAGCCTCACGGAAGGACACTGAGGGTGGCTGTGAGTCTGACTaGTTTGGTACTGTAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFTLYHLWREASRKDTEGGCESD*FGTVIF Trigger: AAAAATTACAGTACCAAAGCAGTCAGACTCACAGCC...ACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGATAGAGGGTGAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR CCA 90 bp | ACTACGGTAAAATACTTTGCGTTAGTGATGACAACTGCAAAAGGCAGTCCGGTTAGGATGGAGACCCTGTaGAGTTTCTCCCCAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTVKYFALVMTTAKGSPVRMETL*SFSPRR Trigger: CCTTCTTGGGGAGAAACTCCACAGGGTCTCCATCCT...AACCGGACTGCCTTTTGCAGTTGTCATCACTAACGCAAAGTATTTTACCGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR TCA 90 bp | AGTCTATCACTCAACACCGGAAACCGGGTTCTTCAGAGAGGCGCTTCTGTTTATCTCTGGTATCCAGGATaGAATACCGTCGAAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLNTGNRVLQRGASVYLWYPG*NTVEEI Trigger: AATTTCTTCGACGGTATTTCATCCTGGATACCAGAG...ATAAACAGAAGCGCCTCTCTGAAGAACCCGGTTTCCGGTGTTGAGTGATAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | CACATTTTCACCACCCAAACATATAAAGCTTCAAACAGTCACTATGGACACAGCGGGCCGTTTTTACTCTaGGGTCTGAGCAAAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HIFTTQTYKASNSHYGHSGPFLL*GLSKAC Trigger: ACAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCC...GCTGTGTCCATAGTGACTGTTTGAAGCTTTATATGTTTGGGTGGTGAAAATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| CDS-3UTR TCA 90 bp | GTCACCACAAAACAGTACTCGCTCAAACCAGTCTATCACTCAACACCGGAAACCTCCACTAAGTCCTGCTaGTCATTAGCTTGTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTTKQYSLKPVYHSTPETSTKSC*SLACRK Trigger: CTTTCTACAAGCTAATGATCAGCAGGACTTAGTGGA...GGTTTCCGGTGTTGAGTGATAGACTGGTTTGAGCGAGTACTGTTTTGTGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | GCACATTTGCATGAGAGCCCACATACGTGCTGCATTCACCAGCTCTTGATGTATTCCACTAAGTCCTGCTaGTCATTAGCTTGTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHLHESPHTCCIHQLLMYSTKSC*SLACRK Trigger: CTTTCTACAAGCTAATGATCAGCAGGACTTAGTGGA...ATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCATGCAAATGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR CCA 90 bp | CCACAAGGCAGTATGACATATGCACTGAGATCATTCACCCTCTATCATCTTTGGGTGCACTTCTTTAAGTaGTATCACCCGCAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQGSMTYALRSFTLYHLWVHFFK*YHPQRF Trigger: GAACCTCTGCGGGTGATACCACTTAAAGAAGTGCAC...CCAAAGATGATAGAGGGTGAATGATCTCAGTGCATATGTCATACTGCCTTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | GTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGGTAACAGTAAAAGGAAGATGGCTCTGTaGCCGTTTCAAATTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VITVFHRLDIQRQQGNSKRKMAL*PFQIVS Trigger: AGAAACAATTTGAAACGGTCACAGAGCCATCTTCCT...TTTACTGTTACCCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCGTTTTTACTCTGAGGTCTGAGCAAAGCCTGTTCAGTCACTTTGGAAGCTCTCCAGTTCAGATTTaGAGTAGCCTATTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAVFTLRSEQSLFSHFGSSPVQI*SSLLCF Trigger: AAAACACAATAGGCTACTTCAAATCTGAACTGGAGA...GCTTCCAAAGTGACTGAACAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGTTTTACTCTGAGGTCTaGGCAAAGCCTGTTCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FILKSLQCSTDWTYRDSRFYSEV*AKPVQS Trigger: TGACTGAACAGGCTTTGCTCAGACCTCAGAGTAAAA...CCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| CDS-3UTR TCA 90 bp | TCCACATTGCAGTATAAATTCTGCAGCACCACAGACCTCATGAGATTAGAAATTGAAGGCACATTTGCATaGGAGCCCACATACGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STLQYKFCSTTDLMRLEIEGTFA*EPTYVL Trigger: CAGCACGTATGTGGGCTCTCATGCAAATGTGCCTTC...AATTTCTAATCTCATGAGGTCTGTGGTGCTGCAGAATTTATACTGCAATGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| CDS-3UTR CCA 90 bp | CACGTGTTTCTCTGGCAATGTCCAAGCAAAGCGTTCAGTTGTTTCACTATTACTGTGCACTTCTTTAAGTaGTATCACCCGCAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HVFLWQCPSKAFSCFTITVHFFK*YHPQRF Trigger: GAACCTCTGCGGGTGATACCACTTAAAGAAGTGCAC...AGTAATAGTGAAACAACTGAACGCTTTGCTTGGACATTGCCAGAGAAACACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR TCA 90 bp | TTGACTAGGCCACTCCCTAAATCCTTGGTTTGCCAACTTAGAGTCCACCCACAATCTCCAGTTCAGATTTaGAGTAGCCTATTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTRPLPKSLVCQLRVHPQSPVQI*SSLLCF Trigger: AAAACACAATAGGCTACTTCAAATCTGAACTGGAGA...TTGTGGGTGGACTCTAAGTTGGCAAACCAAGGATTTAGGGAGTGGCCTAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCTATCAGCCTGCACATAGAAAGTCCGAGATGTCGTCACGATTTCAAACAGAGACCAGTTCAGATTTaGAGTAGCCTATTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAISLHIESPRCRHDFKQRPVQI*SSLLCF Trigger: AAAACACAATAGGCTACTTCAAATCTGAACTGGTCT...CTGTTTGAAATCGTGACGACATCTCGGACTTTCTATGTGCAGGCTGATAGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGGTACAATCCTAAGTGAGATGAGAAGACACAGGCACTTGAGTATAGGTTTATGTCACTCTGTTTaGACTCCTGGACTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWGTILSEMRRHRHLSIGLCHSV*TPGLCA Trigger: TGCACAAAGTCCAGGAGTGCAAACAGAGTGACATAA...ACCTATACTCAAGTGCCTGTGTCTTCTCATCTCACTTAGGATTGTACCCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGAATTCAAGGACAGCCATAGCTACATAGAAAAATCCAATCTCCAAAATGGAAGCTGGCTCTCTTaGAGAGACAGTCTGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QREFKDSHSYIEKSNLQNGSWLS*RDSLDL Trigger: AAGGTCCAGACTGTCTCTCCAAGAGAGCCAGCTTCC...ATTTTGGAGATTGGATTTTTCTATGTAGCTATGGCTGTCCTTGAATTCTCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
||
| 3UTR CAA 72 bp | AGTAAAGGGAAAACCAGGACATTACAAAACCGTGTTTaGGTAGAACTGAAAGTCCTTGAATGGTCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKGKTRTLQNRV*VELKVLEWSGQ Trigger: CTGGCCTGACCATTCAAGGACTTTCAGTTCTACCAAAACACGGTTTTGTAATGTCCTGGTTTTCCCTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGAAAGGAGATACATTATACACACAGGGAAAATACAGCAGATAACACGGGTGCACTTCTTTAAGTaGTATCACCCGCAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSERRYIIHTGKIQQITRVHFFK*YHPQRF Trigger: GAACCTCTGCGGGTGATACCACTTAAAGAAGTGCAC...CCGTGTTATCTGCTGTATTTTCCCTGTGTGTATAATGTATCTCCTTTCAGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGTCAAATCTATGCAAAAATTTCCACTCACCTGGACAGCCAGAATATCATATTTACTTCTTCTTTCTaGGTCGGCGTGATGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQIYAKISTHLDSQNIIFTSSF*VGVMMG Trigger: GCCCATCATCACGCCGACGCAGAAAGAAGAAGTAAA...TATGATATTCTGGCTGTCCAGGTGAGTGGAAATTTTTGCATAGATTTGACTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACAGAGATGAATGGCCAAAGTATTCCGAACCAAACTATTCCTTAGGATGTTTATGTCACTCTGTTTaGACTCCTGGACTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QNRDEWPKYSEPNYSLGCLCHSV*TPGLCA Trigger: TGCACAAAGTCCAGGAGTGCAAACAGAGTGACATAA...ACATCCTAAGGAATAGTTTGGTTCGGAATACTTTGGCCATTCATCTCTGTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGAATTCAAGGACAGCCATAGCTACATAGAAAAATCCAATCTCCAAAATGATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QREFKDSHSYIEKSNLQNDGARD*FNPTVH Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATC...ATTTTGGAGATTGGATTTTTCTATGTAGCTATGGCTGTCCTTGAATTCTCTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | ATCATAAAGGCTATGGTATGGCACAGGACAGTTGACAACAGGGCTACTTTTAAGTCTCCAGTTCAGATTTaGAGTAGCCTATTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IIKAMVWHRTVDNRATFKSPVQI*SSLLCF Trigger: AAAACACAATAGGCTACTTCAAATCTGAACTGGAGA...CTTAAAAGTAGCCCTGTTGTCAACTGTCCTGTGCCATACCATAGCCTTTATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR GCA 90 bp | CACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATGGCCCACTTGATAATTTTATGTCACTCTGTTTaGACTCCTGGACTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRPHEIRNFHLGMAHLIILCHSV*TPGLCA Trigger: TGCACAAAGTCCAGGAGTGCAAACAGAGTGACATAA...AATTATCAAGTGGGCCATTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACAGAGATGAATGGCCAAAGTATTCCGAACCAAACTATTCCTTAGGATGTGGCTGTGAGTCTGACTaGTTTGGTACTGTAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QNRDEWPKYSEPNYSLGCGCESD*FGTVIF Trigger: AAAAATTACAGTACCAAAGCAGTCAGACTCACAGCC...ACATCCTAAGGAATAGTTTGGTTCGGAATACTTTGGCCATTCATCTCTGTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR CCA 90 bp | CACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATGGCCCACTTGATAATTCTCTGTTTGCACTCCTaGACTTTGTGCACTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HRPHEIRNFHLGMAHLIILCLHS*TLCTSL Trigger: TAAAGAAGTGCACAAAGTCCAGGAGTGCAAACAGAG...AATTATCAAGTGGGCCATTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAGTATAAATTCTGCAGCACCACAGACCTCATGAGATTAGAAATTTTCATCTCCACTAAGTCCTGCTaGTCATTAGCTTGTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQYKFCSTTDLMRLEIFISTKSC*SLACRK Trigger: CTTTCTACAAGCTAATGATCAGCAGGACTTAGTGGA...GATGAAAATTTCTAATCTCATGAGGTCTGTGGTGCTGCAGAATTTATACTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGTCAAATCTATGCAAAAATTTCCACTCACCTGGACAGCCAGAATATCATAGCATTCACCAGCTCTTaGTGTATACCTCTGTATACA | + |
|
Preference number: 4 (lower is better) Translates to: SSQIYAKISTHLDSQNIIAFTSS*CIPLYT Trigger: TGTATACAGAGGTATACATCAAGAGCTGGTGAATGC...TATGATATTCTGGCTGTCCAGGTGAGTGGAAATTTTTGCATAGATTTGACTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAGTATAAATTCTGCAGCACCACAGACCTCATGAGATTAGAAATTTTCATCGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LQYKFCSTTDLMRLEIFIALIQL*ISSGLS Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...GATGAAAATTTCTAATCTCATGAGGTCTGTGGTGCTGCAGAATTTATACTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR TCA 90 bp | CACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATGGCCCACTTGATAATTTCTCCAGTTCAGATTTaGAGTAGCCTATTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRPHEIRNFHLGMAHLIISPVQI*SSLLCF Trigger: AAAACACAATAGGCTACTTCAAATCTGAACTGGAGA...AATTATCAAGTGGGCCATTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR GCA 90 bp | CATGAGATTAGAAATTTTCATCTGGGAATGGCCCACTTGATAATTTTAGCTGATGGCTGTGAGTCTGACTaGTTTGGTACTGTAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HEIRNFHLGMAHLIILADGCESD*FGTVIF Trigger: AAAAATTACAGTACCAAAGCAGTCAGACTCACAGCC...ATCAGCTAAAATTATCAAGTGGGCCATTCCCAGATGAAAATTTCTAATCTCATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS GCA 90 bp | CCGGCAGGACGGACAGTGAATTTGGGTTCTGAAGGCCAGCCGGAATaGTCAGAAGAGGATGACCTGCCAGGTCCCCGCTGTGCTACGATG | + |
|
Preference number: 5 (lower is better) Translates to: PAGRTVNLGSEGQPE*SEEDDLPGPRCATM Trigger: CATCGTAGCACAGCGGGGACCTGGCAGGTCATCCTCTTCTGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCGTCCTGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| CDS GCA 90 bp | CCGGCAGGACGGACAGTGAATTTGGGTTCTGAAGGCCAGCCGGAATaGTCCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PAGRTVNLGSEGQPE*SSVYKGSTAFWPAA Trigger: TGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCGTCCTGCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075181.11 |
||
| CDS-3UTR CAA 90 bp | CCTCACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCAGAGACAGTCTGGACCTaGAAGTTCCCTGGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: PHTSLTGRLASSKSTGSPETVWT*KFPGLT Trigger: GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTC...TGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000126355.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCATCTTCTCCCTGAGGGCCGTTTGAAGTTCCCTGGCTaGACCTTGGCAAGAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGWRHLSPLARHLLPEGRLKFPG*TLARDW Trigger: CCAATCTCTTGCCAAGGTCAAGCCAGGGAACTTCAA...ACGGCCCTCAGGGAGAAGATGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000126355.2 |
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| CDS-3UTR CAA 90 bp | CACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCATCTGAGACAGTCTGGACCTaGAAGTTCCCTGGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: HTSLTGRLASSKSTGSPSETVWT*KFPGLT Trigger: GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTC...AGATGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000126355.2 |
||
| CDS-3UTR CAA 90 bp | CGGAAGGACACTGAGGGTGAGTGGCGCAGGCAGCCCACGAGAGCCTCCTCACACTGTGACCGTTTCAAATaGTTTCTATCCAGACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKDTEGEWRRQPTRASSHCDRFK*FLSRLS Trigger: TGAGAGTCTGGATAGAAACAATTTGAAACGGTCACA...GTGTGAGGAGGCTCTCGTGGGCTGCCTGCGCCACTCACCCTCAGTGTCCTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| CDS-3UTR CAA 90 bp | CATCTAAGTCCACTGGCTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGTGGAAGCTGGCTCTCTaGGAGAGACAGTCTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: HLSPLARHLLPEGRFYSEWKLAL*ERQSGP Trigger: AGGTCCAGACTGTCTCTCCAAGAGAGCCAGCTTCCA...CTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAGCCAGTGGACTTAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000126355.2 |
||
| CDS TCA 90 bp | GTTCTGAAGGCCAGCCGGAATGCTCGTGCTGCATTCACCAGCTCTTaGTGTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLKASRNARAAFTSS*CIPLYTRVRQPSGL Trigger: CAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCCTTCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
||
| CDS GCA 90 bp | CCGGCAGGACGGACAGTGAATTTGGGTTCTGAAGGCCAGCCGGAATaGTCGTGCTGCATTCACCAGCTCTTGATGTATACCTCTGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: PAGRTVNLGSEGQPE*SCCIHQLLMYTSVY Trigger: GTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCGTCCTGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
||
| CDS-3UTR CAA 90 bp | ATCATCTTTGGCGAGAAGCCTCACGGAAGGACACTGAGGGTGAGTGGCGCAGGCTTGCACTCCTGGACTTaGTGCACTTCTTTAAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IIFGEKPHGRTLRVSGAGLHSWT*CTSLSG Trigger: ACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAA...GCCTGCGCCACTCACCCTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTGACCTTGGCAAGAGATaGGTAAACTCCTCGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PVSPLLLALFHCHLHQSSDLGKR*VNSSLL Trigger: GAGAAGCGAGGAGTTTACCAATCTCTTGCCAAGGTC...AGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
||
| CDS-3UTR CAA 90 bp | GCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGTCTGAGCAAAGCCTGTTCGACCTTGGCAAGAGATaGGTAAACTCCTCGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AIFSLRAVFTLRSEQSLFDLGKR*VNSSLL Trigger: GAGAAGCGAGGAGTTTACCAATCTCTTGCCAAGGTC...GAACAGGCTTTGCTCAGACCTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075181.11 ENSMUST00000126355.2 |
||
| CDS-3UTR CAA 90 bp | CACACATCGCTGACTGGCAGGCTGGCGTCATCTAAGTCCACTGGCTCGCCATCTTGCATTCACCAGCTCTaGATGTATACCTCTGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: HTSLTGRLASSKSTGSPSCIHQL*MYTSVY Trigger: GTATACAGAGGTATACATCAAGAGCTGGTGAATGCA...AGATGGCGAGCCAGTGGACTTAGATGACGCCAGCCTGCCAGTCAGCGATGTGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120441.8 ENSMUST00000126355.2 |
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| CDS GCA 90 bp | CGGACAGTGAATTTGGGTTCTGAAGGCCAGCCGGAATGCTCGTGCTaGATTCACCAGCTCTTGATGTATACCTCTGTATACAAGGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RTVNLGSEGQPECSC*IHQLLMYTSVYKGS Trigger: CGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
||
| CDS GCA 90 bp | GGACGGACAGTGAATTTGGGTTCTGAAGGCCAGCCGGAATGCTCGTaGTGCATTCACCAGCTCTTGATGTATACCTCTGTATACAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRTVNLGSEGQPECS*CIHQLLMYTSVYKG Trigger: ACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
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| CDS-3UTR CAA 90 bp | CCAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTTTGCACTCCTGGACTTaGTGCACTTCTTTAAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PVSPLLLALFHCHLHQSSLHSWT*CTSLSG Trigger: ACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAA...AGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTATTATGTCACTCTGTTaGCACTCCTGGACTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVSPLLLALFHCHLHQSSIMSLC*HSWTLC Trigger: GCACAAAGTCCAGGAGTGCAAACAGAGTGACATAAT...AGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| CDS-3UTR CAA 90 bp | TGGCTCGCCATCTTCTCCCTGAGGGCCGTTTTTACTCTGAGGTCTGAGCAAAGCATTATGTCACTCTGTTaGCACTCCTGGACTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLAIFSLRAVFTLRSEQSIMSLC*HSWTLC Trigger: GCACAAAGTCCAGGAGTGCAAACAGAGTGACATAAT...GCTTTGCTCAGACCTCAGAGTAAAAACGGCCCTCAGGGAGAAGATGGCGAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000126355.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTAAGTTCTGTAAGACACTaGCTTCTTACCACAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QSPHFCLPCSTATYTNHLSSVRH*LLTTVT Trigger: GGTGACTGTGGTAAGAAGCAAGTGTCTTACAGAACT...TAGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| CDS-3UTR CAA 90 bp | GTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTGCCGCATCTGGAACAGTTCTGTAAGACACTaGCTTCTTACCACAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: VYLCIQGFDSLLACRIWNSSVRH*LLTTVT Trigger: GGTGACTGTGGTAAGAAGCAAGTGTCTTACAGAACT...GTTCCAGATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| CDS-3UTR CAA 90 bp | CCAGTCTCCCCACTTCTGCTTGCCCTGTTCCACTGCCACCTACACCAATCATCTTGTGACCGTTTCAAATaGTTTCTATCCAGACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PVSPLLLALFHCHLHQSSCDRFK*FLSRLS Trigger: TGAGAGTCTGGATAGAAACAATTTGAAACGGTCACA...AGATGATTGGTGTAGGTGGCAGTGGAACAGGGCAAGCAGAAGTGGGGAGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| CDS-3UTR CAA 90 bp | TTTATTCTCAAGTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGTGGAAGCTGGCTCTCTaGGAGAGACAGTCTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: FILKSLQCSTDWTYRDSRWKLAL*ERQSGP Trigger: AGGTCCAGACTGTCTCTCCAAGAGAGCCAGCTTCCA...CCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAGAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| CDS-3UTR CAA 90 bp | CCACAAGGCAGTATGACATATGCACTGAGATCATTCACCCTCTATCATCTTTGGTGGAAGCTGGCTCTCTaGGAGAGACAGTCTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: PQGSMTYALRSFTLYHLWWKLAL*ERQSGP Trigger: AGGTCCAGACTGTCTCTCCAAGAGAGCCAGCTTCCA...CCAAAGATGATAGAGGGTGAATGATCTCAGTGCATATGTCATACTGCCTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
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| CDS-3UTR CAA 90 bp | AGATCATTCACCCTCTATCATCTTTGGCGAGAAGCCTCACGGAAGGACACTGAGATTATGTCACTCTGTTaGCACTCCTGGACTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSFTLYHLWREASRKDTEIMSLC*HSWTLC Trigger: GCACAAAGTCCAGGAGTGCAAACAGAGTGACATAAT...CTCAGTGTCCTTCCGTGAGGCTTCTCGCCAAAGATGATAGAGGGTGAATGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
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| CDS-3UTR CAA 90 bp | AAACACCTAAGATGTCACCACAAAACAGTACTCGCTCAAACCAGTCTATCACTCGAGACAGTCTGGACCTaGAAGTTCCCTGGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: KHLRCHHKTVLAQTSLSLETVWT*KFPGLT Trigger: GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTC...GAGTGATAGACTGGTTTGAGCGAGTACTGTTTTGTGGTGACATCTTAGGTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
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| CDS-3UTR CAA 90 bp | CCACAAGGCAGTATGACATATGCACTGAGATCATTCACCCTCTATCATCTTTGGTTGAAGTTCCCTGGCTaGACCTTGGCAAGAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQGSMTYALRSFTLYHLWLKFPG*TLARDW Trigger: CCAATCTCTTGCCAAGGTCAAGCCAGGGAACTTCAA...CCAAAGATGATAGAGGGTGAATGATCTCAGTGCATATGTCATACTGCCTTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
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| CDS-3UTR CAA 90 bp | ACGTGCTGCATTCACCAGCTCTTGATGTATACCTCTGTATACAAGGGTTCGACATTGCACTCCTGGACTTaGTGCACTTCTTTAAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TCCIHQLLMYTSVYKGSTLHSWT*CTSLSG Trigger: ACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAA...TGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
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| CDS CCA 90 bp | TATGTCACTCTGTTTGCACTCCTGGACTTTGTGCACTTCTTTAAGTaGTATCACCCGCAGAGGTTCCTTCTCCAGTTCAGATTTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: YVTLFALLDFVHFFK*YHPQRFLLQFRFEV Trigger: TACTTCAAATCTGAACTGGAGAAGGAACCTCTGCGGGTGATACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAAACAGAGTGACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000151119.9 |
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| CDS-3UTR CAA 90 bp | AATCATGTAGGACTTTGGGGTACAATCCTAAGTGAGATGAGAAGACACAGGCACAGTTCTGTAAGACACTaGCTTCTTACCACAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: NHVGLWGTILSEMRRHRHSSVRH*LLTTVT Trigger: GGTGACTGTGGTAAGAAGCAAGTGTCTTACAGAACT...GTGCCTGTGTCTTCTCATCTCACTTAGGATTGTACCCCAAAGTCCTACATGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
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| CDS-3UTR CAA 90 bp | CCCACATACGTGCTGCATTCACCAGCTCTTGATGTATACCTCTGTATACAAGGGTGTGACCGTTTCAAATaGTTTCTATCCAGACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PTYVLHSPALDVYLCIQGCDRFK*FLSRLS Trigger: TGAGAGTCTGGATAGAAACAATTTGAAACGGTCACA...CCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136963.8 ENSMUST00000151119.9 |
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| CDS-3UTR CAA 90 bp | GTCATTACAGTGTTCCACCGACTGGACATACAGAGACAGCAGGGTAACAGTAAATGCATTCACCAGCTCTaGATGTATACCTCTGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: VITVFHRLDIQRQQGNSKCIHQL*MYTSVY Trigger: GTATACAGAGGTATACATCAAGAGCTGGTGAATGCA...TTTACTGTTACCCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120441.8 |
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| CDS-3UTR CAA 90 bp | CACCACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATGGCCCACTTGATAAGTTCTGTAAGACACTaGCTTCTTACCACAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: HHRPHEIRNFHLGMAHLISSVRH*LLTTVT Trigger: GGTGACTGTGGTAAGAAGCAAGTGTCTTACAGAACT...TATCAAGTGGGCCATTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR CAA 90 bp | ATCATAAAGGCTATGGTATGGCACAGGACAGTTGACAACAGGGCTACTTTTAAGATTATGTCACTCTGTTaGCACTCCTGGACTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IIKAMVWHRTVDNRATFKIMSLC*HSWTLC Trigger: GCACAAAGTCCAGGAGTGCAAACAGAGTGACATAAT...CTTAAAAGTAGCCCTGTTGTCAACTGTCCTGTGCCATACCATAGCCTTTATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151119.9 |
||
| CDS-3UTR CAA 90 bp | CACATTTTCACCACCCAAACATATAAAGCTTCAAACAGTCACTATGGACACAGCTTGCACTCCTGGACTTaGTGCACTTCTTTAAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HIFTTQTYKASNSHYGHSLHSWT*CTSLSG Trigger: ACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAA...GCTGTGTCCATAGTGACTGTTTGAAGCTTTATATGTTTGGGTGGTGAAAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAGTATAAATTCTGCAGCACCACAGACCTCATGAGATTAGAAATTTTCATCTTGAAGTTCCCTGGCTaGACCTTGGCAAGAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQYKFCSTTDLMRLEIFILKFPG*TLARDW Trigger: CCAATCTCTTGCCAAGGTCAAGCCAGGGAACTTCAA...GATGAAAATTTCTAATCTCATGAGGTCTGTGGTGCTGCAGAATTTATACTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
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| CDS-3UTR CAA 90 bp | CATGAGATTAGAAATTTTCATCTGGGAATGGCCCACTTGATAATTTTAGCTGATGACCTTGGCAAGAGATaGGTAAACTCCTCGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HEIRNFHLGMAHLIILADDLGKR*VNSSLL Trigger: GAGAAGCGAGGAGTTTACCAATCTCTTGCCAAGGTC...ATCAGCTAAAATTATCAAGTGGGCCATTCCCAGATGAAAATTTCTAATCTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 |
||
| CDS-3UTR CAA 90 bp | ATTGGCATAGCTGCCTGCCAAATGGTGATTTTTCTAACATCATTCACCTACACATGTGACCGTTTCAAATaGTTTCTATCCAGACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IGIAACQMVIFLTSFTYTCDRFK*FLSRLS Trigger: TGAGAGTCTGGATAGAAACAATTTGAAACGGTCACA...TGTGTAGGTGAATGATGTTAGAAAAATCACCATTTGGCAGGCAGCTATGCCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136963.8 |
||
| CDS-3UTR CAA 90 bp | AGATCTGGTTTTCAAGACATAAATATTGCACAGGTAGTTGACCACCAACATTCTATTATGTCACTCTGTTaGCACTCCTGGACTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSGFQDINIAQVVDHQHSIMSLC*HSWTLC Trigger: GCACAAAGTCCAGGAGTGCAAACAGAGTGACATAAT...AGAATGTTGGTGGTCAACTACCTGTGCAATATTTATGTCTTGAAAACCAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048180.12 ENSMUST00000120441.8 |
||
| CDS-3UTR CAA 90 bp | CTATCTCATTTAACCTATCAAACTACGCTACTGAAATTAGTTTTCCCGGACATTGTGAGTCTGACTGCTTaGGTACCTTTGAAATGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSHLTYQTTLLKLVFPDIVSLTA*VPLKCR Trigger: CCTACATTTCAAAGGTACCAAAGCAGTCAGACTCAC...AATGTCCGGGAAAACTAATTTCAGTAGCGTAGTTTGATAGGTTAAATGAGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| CDS-3UTR CAA 90 bp | CACAGACCTCATGAGATTAGAAATTTTCATCTGGGAATGGCCCACTTGATAATTTGTGACCGTTTCAAATaGTTTCTATCCAGACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRPHEIRNFHLGMAHLIICDRFK*FLSRLS Trigger: TGAGAGTCTGGATAGAAACAATTTGAAACGGTCACA...AATTATCAAGTGGGCCATTCCCAGATGAAAATTTCTAATCTCATGAGGTCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 |
||
| CDS CAA 72 bp | GCGGTGGCTGCGGCCCCGGCAGGACGGACAGTGAATTaGGGTTCTGAAGGCCAGCCGGAATGCTCGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AVAAAPAGRTVN*GSEGQPECSCC Trigger: GCAGCACGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCGTCCTGCCGGGGCCGCAGCCACCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
||
| CDS CAA 72 bp | GCGGTGGCTGCGGCCCCGGCAGGACGGACAGTGAATTaGGGTTCTGAAGGCCAGCCGGAATGCTCAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AVAAAPAGRTVN*GSEGQPECSEE Trigger: CTCTTCTGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCGTCCTGCCGGGGCCGCAGCCACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| CDS CAA 72 bp | GCGGTGGCTGCGGCCCCGGCAGGACGGACAGTGAATTaGGGTTCTGAAGGCCAGCCGGAATGCTCCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: AVAAAPAGRTVN*GSEGQPECSSV Trigger: TACAGAGGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCGTCCTGCCGGGGCCGCAGCCACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075181.11 |
||
| CDS GCA 72 bp | CTGAAGGCCAGCCGGAATGCTCAGAAGAGGATGACCTaGCAGGTCCCCGCTGTGCTACGATGGCGCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LKASRNAQKRMT*QVPAVLRWRQR Trigger: TCTCTGGCGCCATCGTAGCACAGCGGGGACCTGGCAGGTCATCCTCTTCTGAGCATTCCGGCTGGCCTTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
||
| CDS GCA 72 bp | CTCCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTaGCGCATAGAAGAGGATGACCTGCCAGGTCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: LLCIQGFDSLLA*RIEEDDLPGPR Trigger: GCGGGGACCTGGCAGGTCATCCTCTTCTATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075181.11 |
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| CDS GCA 72 bp | CGGACAGTGAATTTGGGTTCTGAAGGCCAGCCGGAATaGTCAGAAGAGGATGACCTGCCAGGTCCCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RTVNLGSEGQPE*SEEDDLPGPRC Trigger: ACAGCGGGGACCTGGCAGGTCATCCTCTTCTGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048180.12 |
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| CDS GCA 72 bp | CGGACAGTGAATTTGGGTTCTGAAGGCCAGCCGGAATaGTCCTCTGTATACAAGGGTTCGACAGCCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RTVNLGSEGQPE*SSVYKGSTAFW Trigger: CCAGAAGGCTGTCGAACCCTTGTATACAGAGGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075181.11 |
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| CDS CAA 72 bp | GGCCAGCCGGAATGCTCGTGCTGCATTCACCAGCTCTaGATGTATACCTCTGTATACAAGGGTTCGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: GQPECSCCIHQL*MYTSVYKGSTA Trigger: GGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
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| CDS CAA 90 bp | CGTGATGATGGGCACACCACCAACAATGTCAGTTCTGTAAGACACTaGCTTCTTACCACAGTCACCTTGGCGACTCAGGCTGTCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RDDGHTTNNVSSVRH*LLTTVTLATQAVGG Trigger: GCCTCCGACAGCCTGAGTCGCCAAGGTGACTGTGGTAAGAAGCAAGTGTCTTACAGAACTGACATTGTTGGTGGTGTGCCCATCATCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000151119.9 |
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| CDS CAA 90 bp | GGTTCTGAAGGCCAGCCGGAATGCTCGTGCTGCATTCACCAGCTCTaGATGTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GSEGQPECSCCIHQL*MYTSVYKGSTAFWP Trigger: AGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCCTTCAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
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| CDS GCA 72 bp | CGGACAGTGAATTTGGGTTCTGAAGGCCAGCCGGAATaGTCGTGCTGCATTCACCAGCTCTTGATGTATACC | + |
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Preference number: 6 (lower is better) Translates to: RTVNLGSEGQPE*SCCIHQLLMYT Trigger: GGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCACTGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
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| CDS CAA 72 bp | GGGCACACCACCAACAATGTCAGTTCTGTAAGACACTaGCTTCTTACCACAGTCACCTTGGCGACTCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GHTTNNVSSVRH*LLTTVTLATQA Trigger: AGCCTGAGTCGCCAAGGTGACTGTGGTAAGAAGCAAGTGTCTTACAGAACTGACATTGTTGGTGGTGTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000151119.9 |
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| CDS GCA 72 bp | TCCAGACTCTCACCACATTCGTTTACTTCTTCTTTCTaGGTCGGCGTGATGATGGGCACACCACCAACAATG | + |
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Preference number: 6 (lower is better) Translates to: SRLSPHSFTSSF*VGVMMGTPPTM Trigger: CATTGTTGGTGGTGTGCCCATCATCACGCCGACGCAGAAAGAAGAAGTAAACGAATGTGGTGAGAGTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000151119.9 |
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| CDS GCA 72 bp | GTGAATTTGGGTTCTGAAGGCCAGCCGGAATGCTCGTaGTGCATTCACCAGCTCTTGATGTATACCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: VNLGSEGQPECS*CIHQLLMYTSV Trigger: TACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCCTTCAGAACCCAAATTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
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| CDS GCA 72 bp | AATTTGGGTTCTGAAGGCCAGCCGGAATGCTCGTGCTaGATTCACCAGCTCTTGATGTATACCTCTGTATAC | + |
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Preference number: 6 (lower is better) Translates to: NLGSEGQPECSC*IHQLLMYTSVY Trigger: GTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCCTTCAGAACCCAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126355.2 |
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| CDS CCA 72 bp | CTGTTTGCACTCCTGGACTTTGTGCACTTCTTTAAGTaGTATCACCCGCAGAGGTTCCTTCTCCAGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LFALLDFVHFFK*YHPQRFLLQFR Trigger: TCTGAACTGGAGAAGGAACCTCTGCGGGTGATACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048180.12 ENSMUST00000075181.11 ENSMUST00000120441.8 ENSMUST00000151119.9 |
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