Pregenerated sensors for PLEK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021118Ensembl transcript IDs: ENSMUST00000021544.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGAAAGAGGTACTACTATTGTCCCCAAAGACAGATTTCTGTCCTaGAGAGCAAAGTCAAGATGCTGCCCACCTAACAGCTGGTCCATC | + |
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Preference number: 1 (lower is better) Translates to: RERGTTIVPKDRFLS*RAKSRCCPPNSWSI Trigger: GATGGACCAGCTGTTAGGTGGGCAGCATCTTGACTTTGCTCTTCAGGACAGAAATCTGTCTTTGGGGACAATAGTAGTACCTCTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| 3UTR TCA 90 bp | AGGGACAGATGTCATTCTTTATTAATCCCAGAGATACTGAGTTGTTaGAATCAGTTGAGAGAGAGTCTTGAGACTAGAGTATTTAATACA | + |
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Preference number: 1 (lower is better) Translates to: RDRCHSLLIPEILSC*NQLRESLETRVFNT Trigger: TGTATTAAATACTCTAGTCTCAAGACTCTCTCTCAACTGATTTCAACAACTCAGTATCTCTGGGATTAATAAAGAATGACATCTGTCCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| 3UTR-3UTR TCA 90 bp | CATCCCCGCTGTCATCTGAGGAGCCACTTTGGGCAGTCTTACTCCAAAGCCATGCAAGTCCTCCACCACTaGGCCACATCCCCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: HPRCHLRSHFGQSYSKAMQVLHH*ATSPAQ Trigger: CTGGGCTGGGGATGTGGCTCAGTGGTGGAGGACTTG...CATGGCTTTGGAGTAAGACTGCCCAAAGTGGCTCCTCAGATGACAGCGGGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| 3UTR TCA 72 bp | AAGGCAGAAGGAAATCATCGCATCCCCGCTGTCATCTaGGGAGCCACTTTGGGCAGTCTTACTCCAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: KAEGNHRIPAVI*GATLGSLTPKP Trigger: TGGCTTTGGAGTAAGACTGCCCAAAGTGGCTCCTCAGATGACAGCGGGGATGCGATGATTTCCTTCTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGACAGATTTCTGTCCTGAAGAGCAAAGTCAAGATGCTGCCCACCTAACACCCCAGCCCAGTATCTaGTACTCCAGTTCTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: PKTDFCPEEQSQDAAHLTPQPSI*YSSSPG Trigger: TCCTGGAGAACTGGAGTACAAGATACTGGGCTGGGG...TGTTAGGTGGGCAGCATCTTGACTTTGCTCTTCAGGACAGAAATCTGTCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| 3UTR CCA 72 bp | ATCATCGCATCCCCGCTGTCATCTGAGGAGCCACTTTaGGCAGTCTTACTCCAAAGCCATGCAACATTTATA | + |
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Preference number: 3 (lower is better) Translates to: IIASPLSSEEPL*AVLLQSHATFI Trigger: TATAAATGTTGCATGGCTTTGGAGTAAGACTGCCCAAAGTGGCTCCTCAGATGACAGCGGGGATGCGATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGACAGATTTCTGTCCTGAAGAGCAAAGTCAAGATGCTGCCCACCTAACAGTCCATCTTTTAAAGTaGGTCATAGGAAGGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: PKTDFCPEEQSQDAAHLTVHLLK*VIGRQK Trigger: CTTCTGCCTTCCTATGACCAACTTTAAAAGATGGAC...TGTTAGGTGGGCAGCATCTTGACTTTGCTCTTCAGGACAGAAATCTGTCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| 3UTR TCA 72 bp | TGTCATTCTTTATTAATCCCAGAGATACTGAGTTGTTaGAATCAGTTGAGAGAGAGTCTTGAGACTAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: CHSLLIPEILSC*NQLRESLETRV Trigger: TACTCTAGTCTCAAGACTCTCTCTCAACTGATTTCAACAACTCAGTATCTCTGGGATTAATAAAGAATGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGGAAATCATCGCATCCCCGCTGTCATCTGAGGAGCCACTTTGGGCAGTCCCTGGCTGCCCTGCATaGATAGCCCCTGTTATCTCA | + |
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Preference number: 4 (lower is better) Translates to: QKEIIASPLSSEEPLWAVPGCPA*IAPVIS Trigger: TGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGG...GACTGCCCAAAGTGGCTCCTCAGATGACAGCGGGGATGCGATGATTTCCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | TCCACCACTGAGCCACATCCCCAGCCCAGTATCTTGTACTCCAGTTCTCCAGGAGTAGTGCAGGAAAGCTaGGTCCTTCCTCAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: STTEPHPQPSILYSSSPGVVQES*VLPQNK Trigger: TTTGTTCTGAGGAAGGACCCAGCTTTCCTGCACTAC...TCCTGGAGAACTGGAGTACAAGATACTGGGCTGGGGATGTGGCTCAGTGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | GCATCCCCGCTGTCATCTGAGGAGCCACTTTGGGCAGTCTTACTCCAAAGCCATAAGGATGAACCATCGTaGCTTCCAGTTGTGGACAAT | + |
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Preference number: 4 (lower is better) Translates to: ASPLSSEEPLWAVLLQSHKDEPS*LPVVDN Trigger: ATTGTCCACAACTGGAAGGCACGATGGTTCATCCTT...ATGGCTTTGGAGTAAGACTGCCCAAAGTGGCTCCTCAGATGACAGCGGGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | AGTCAAGATGCTGCCCACCTAACAGCTGGTCCATCTTTTAAAGTTGGTCATAGGTGGATCTTCCCTGGCTaGCCTGCATGGATAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SQDAAHLTAGPSFKVGHRWIFPG*PAWIAP Trigger: AGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCA...CCTATGACCAACTTTAAAAGATGGACCAGCTGTTAGGTGGGCAGCATCTTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | ATAGGAAGGCAGAAGGAAATCATCGCATCCCCGCTGTCATCTGAGGAGCCACTTATGCAGGCTGATGTGTaGGGGCAACTTGAAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: IGRQKEIIASPLSSEEPLMQADV*GQLEGV Trigger: AACTCCTTCAAGTTGCCCCCACACATCAGCCTGCAT...AAGTGGCTCCTCAGATGACAGCGGGGATGCGATGATTTCCTTCTGCCTTCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | GTACTCCAGTTCTCCAGGAAGTCTTATCTGTATCCAATGATGAGAACCCTGGTCCTGCCTCCAGACGGCTaGCTGCAAAGTTGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VLQFSRKSYLYPMMRTLVLPPDG*LQSCWR Trigger: TCTCCAGCAACTTTGCAGCCAGCCGTCTGGAGGCAG...GACCAGGGTTCTCATCATTGGATACAGATAAGACTTCCTGGAGAACTGGAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR TCA 90 bp | GATGCTGCCCACCTAACAGCTGGTCCATCTTTTAAAGTTGGTCATAGGAAGGCATGTTCTGCCGAAGGATaGACCATCGTGCCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: DAAHLTAGPSFKVGHRKACSAEG*TIVPSS Trigger: ACTGGAAGGCACGATGGTTCATCCTTCGGCAGAACA...TGCCTTCCTATGACCAACTTTAAAAGATGGACCAGCTGTTAGGTGGGCAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | GTCATAGGAAGGCAGAAGGAAATCATCGCATCCCCGCTGTCATCTGAGGAGCCAAGGTCTTTTTGTAGGTaGTTCCTTGCTCCATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: VIGRQKEIIASPLSSEEPRSFCR*FLAPCW Trigger: CCAACATGGAGCAAGGAAGCACCTACAAAAAGACCT...TGGCTCCTCAGATGACAGCGGGGATGCGATGATTTCCTTCTGCCTTCCTATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | AGTCAAGATGCTGCCCACCTAACAGCTGGTCCATCTTTTAAAGTTGGTCATAGGCTCCAGACGGCTGGCTaGAAAGTTGCTGGAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: SQDAAHLTAGPSFKVGHRLQTAG*KVAGDE Trigger: CTCATCTCCAGCAACTTTGCAGCCAGCCGTCTGGAG...CCTATGACCAACTTTAAAAGATGGACCAGCTGTTAGGTGGGCAGCATCTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | AGTCAAGATGCTGCCCACCTAACAGCTGGTCCATCTTTTAAAGTTGGTCATAGGCGTGCCTTCCAGTTGTaGACAATGTGGCCCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SQDAAHLTAGPSFKVGHRRAFQL*TMWPLL Trigger: CAAGAGGGGCCACATTGTCCACAACTGGAAGGCACG...CCTATGACCAACTTTAAAAGATGGACCAGCTGTTAGGTGGGCAGCATCTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGGTCCATCTTTTAAAGTTGGTCATAGGAAGGCAGAAGGAAATCATCGCACTCCATGTTGGGGCTTaGCCGGATTCCAGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QLVHLLKLVIGRQKEIIALHVGA*PDSSAG Trigger: ACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAG...TGCGATGATTTCCTTCTGCCTTCCTATGACCAACTTTAAAAGATGGACCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | GTCATAGGAAGGCAGAAGGAAATCATCGCATCCCCGCTGTCATCTGAGGAGCCAGCCTGTTCTCTTCTTTaGAAGGGTCATAGTAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: VIGRQKEIIASPLSSEEPACSLL*KGHSSA Trigger: TGCACTACTATGACCCTTCCAAAGAAGAGAACAGGC...TGGCTCCTCAGATGACAGCGGGGATGCGATGATTTCCTTCTGCCTTCCTATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR TCA 90 bp | ATAGGAAGGCAGAAGGAAATCATCGCATCCCCGCTGTCATCTGAGGAGCCACTTATAGGTAGCCTTGTTTaGCCACTGTGCCACTTAACT | + |
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Preference number: 4 (lower is better) Translates to: IGRQKEIIASPLSSEEPLIGSLV*PLCHLT Trigger: AGTTAAGTGGCACAGTGGTCAAACAAGGCTACCTAT...AAGTGGCTCCTCAGATGACAGCGGGGATGCGATGATTTCCTTCTGCCTTCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | GGACAGATGTCATTCTTTATTAATCCCAGAGATACTGAGTTGTTGAAATCAGTTGGAGGCCAGGGTCACTaGCTCCAGACGGCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GQMSFFINPRDTELLKSVGGQGH*LQTAGC Trigger: GCAGCCAGCCGTCTGGAGGCAGTGACCCTGGCCTCC...AACTGATTTCAACAACTCAGTATCTCTGGGATTAATAAAGAATGACATCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | GTACTCCAGTTCTCCAGGAAGTCTTATCTGTATCCAATGATGAGAACCCTGGTCCAGTTGTGGACAATGTaGCCCCTCTTGACGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VLQFSRKSYLYPMMRTLVQLWTM*PLLTRK Trigger: CTTCCTCGTCAAGAGGGGCCACATTGTCCACAACTG...GACCAGGGTTCTCATCATTGGATACAGATAAGACTTCCTGGAGAACTGGAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | ACATCCCCAGCCCAGTATCTTGTACTCCAGTTCTCCAGGAAGTCTTATCTGTATTTGTTGGATCTTCCCTaGCTGCCCTGCATGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: TSPAQYLVLQFSRKSYLYLLDLP*LPCMDS Trigger: GCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAA...ATACAGATAAGACTTCCTGGAGAACTGGAGTACAAGATACTGGGCTGGGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | GATGCTGCCCACCTAACAGCTGGTCCATCTTTTAAAGTTGGTCATAGGAAGGCAAGTATGTGGAGTTGTTaGATCTTCCCTGGCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: DAAHLTAGPSFKVGHRKASMWSC*IFPGCP Trigger: AGGGCAGCCAGGGAAGATCCAACAACTCCACATACT...TGCCTTCCTATGACCAACTTTAAAAGATGGACCAGCTGTTAGGTGGGCAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | GATGCTGCCCACCTAACAGCTGGTCCATCTTTTAAAGTTGGTCATAGGAAGGCAGCTCAGCCTTGCTGCTaGCCTGGATATAATAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: DAAHLTAGPSFKVGHRKAAQPCC*PGYNSV Trigger: CACACTATTATATCCAGGCCAGCAGCAAGGCTGAGC...TGCCTTCCTATGACCAACTTTAAAAGATGGACCAGCTGTTAGGTGGGCAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | GTACTCCAGTTCTCCAGGAAGTCTTATCTGTATCCAATGATGAGAACCCTGGTCCTCGCTCAGCCTTGCTaGTGGCCTGGATATAATAGT | + |
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Preference number: 4 (lower is better) Translates to: VLQFSRKSYLYPMMRTLVLAQPC*WPGYNS Trigger: ACTATTATATCCAGGCCAGCAGCAAGGCTGAGCGAG...GACCAGGGTTCTCATCATTGGATACAGATAAGACTTCCTGGAGAACTGGAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | GTGTTCCAACAGAGAAAGAGGTACTACTATTGTCCCCAAAGACAGATTTCTGTCTTCCTTGCTCCATGTTaGGGCTTGGCCGGATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VFQQRKRYYYCPQRQISVFLAPC*GLAGFQ Trigger: CTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAA...GACAGAAATCTGTCTTTGGGGACAATAGTAGTACCTCTTTCTCTGTTGGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | AGAAAACCGGAGTTAGTGTTCCAACAGAGAAAGAGGTACTACTATTGTCCCCAAGCCGGATTCCAGTGCTaGTGTCATGCATCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RKPELVFQQRKRYYYCPQAGFQC*CHASCP Trigger: TGGACAAGATGCATGACACCAGCACTGGAATCCGGC...TTGGGGACAATAGTAGTACCTCTTTCTCTGTTGGAACACTAACTCCGGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | AGAAAACCGGAGTTAGTGTTCCAACAGAGAAAGAGGTACTACTATTGTCCCCAATACAGGAGCGTGTTCTaGCGAAGGATGAACCATCGT | + |
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Preference number: 4 (lower is better) Translates to: RKPELVFQQRKRYYYCPQYRSVF*RRMNHR Trigger: ACGATGGTTCATCCTTCGGCAGAACACGCTCCTGTA...TTGGGGACAATAGTAGTACCTCTTTCTCTGTTGGAACACTAACTCCGGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | AGAAAACCGGAGTTAGTGTTCCAACAGAGAAAGAGGTACTACTATTGTCCCCAAAGCTTCAATCCATTCTaGTCGCTCAGCCTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RKPELVFQQRKRYYYCPQSFNPF*SLSLAA Trigger: AGCAGCAAGGCTGAGCGAGCAGAATGGATTGAAGCT...TTGGGGACAATAGTAGTACCTCTTTCTCTGTTGGAACACTAACTCCGGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR TCA 90 bp | GGACAGATGTCATTCTTTATTAATCCCAGAGATACTGAGTTGTTGAAATCAGTTCAAAGTTGCTGGAGATaGGCCAGTCCACCAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GQMSFFINPRDTELLKSVQSCWR*ASPPGR Trigger: CCTCCCTGGTGGACTGGCTCATCTCCAGCAACTTTG...AACTGATTTCAACAACTCAGTATCTCTGGGATTAATAAAGAATGACATCTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | CTAGAGTATTTAATACAGAAAACCGGAGTTAGTGTTCCAACAGAGAAAGAGGTACTTCCCTGGCTGCCCTaGATGGATAGCCCCTGTTAT | + |
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Preference number: 4 (lower is better) Translates to: LEYLIQKTGVSVPTEKEVLPWLP*MDSPCY Trigger: ATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAG...TACCTCTTTCTCTGTTGGAACACTAACTCCGGTTTTCTGTATTAAATACTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | GTCCATCTTTTAAAGTTGGTCATAGGAAGGCAGAAGGAAATCATCGCATCCCCGGAGTTCTTCAGTATGTaGAGTTGTTGGATCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: VHLLKLVIGRQKEIIASPEFFSM*SCWIFP Trigger: AGGGAAGATCCAACAACTCCACATACTGAAGAACTC...CGGGGATGCGATGATTTCCTTCTGCCTTCCTATGACCAACTTTAAAAGATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR GCA 90 bp | GGACAGATGTCATTCTTTATTAATCCCAGAGATACTGAGTTGTTGAAATCAGTTCTGCTCGCTCAGCCTTaGTGCTGGCCTGGATATAAT | + |
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Preference number: 4 (lower is better) Translates to: GQMSFFINPRDTELLKSVLLAQP*CWPGYN Trigger: ATTATATCCAGGCCAGCAGCAAGGCTGAGCGAGCAG...AACTGATTTCAACAACTCAGTATCTCTGGGATTAATAAAGAATGACATCTGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | AGTCAAGATGCTGCCCACCTAACAGCTGGTCCATCTTTTAAAGTTGGTCATAGGTTGAAGAGATTTCCTTaGACATTCCCTTTAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SQDAAHLTAGPSFKVGHRLKRFP*TFPLTP Trigger: TGGAGTTAAAGGGAATGTCCAAGGAAATCTCTTCAA...CCTATGACCAACTTTAAAAGATGGACCAGCTGTTAGGTGGGCAGCATCTTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CCA 90 bp | CAGATGTCATTCTTTATTAATCCCAGAGATACTGAGTTGTTGAAATCAGTTGAGAGAAAACCCACCTACTaGCCTGTTCTCTTCTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: QMSFFINPRDTELLKSVERKPTY*PVLFFG Trigger: TCCAAAGAAGAGAACAGGCCAGTAGGTGGGTTTTCT...CTCAACTGATTTCAACAACTCAGTATCTCTGGGATTAATAAAGAATGACATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 90 bp | AGCCAGATCGCCAGAGCGAATAGCTCCCATGCTCCGGACCCCTACTaGCCTGAGAAAGTTCTCTTCCATAAGCATGGAGGCCAGGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SQIARANSSHAPDPY*PEKVLFHKHGGQGH Trigger: GTGACCCTGGCCTCCATGCTTATGGAAGAGAACTTTCTCAGGCCAGTAGGGGTCCGGAGCATGGGAGCTATTCGCTCTGGCGATCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 90 bp | CCTTGCTCCATGTTGGGGCTTGGCCGGATTCCAGTGCTGGTGTCATaGATCTTGTCCACAATTCGATGCAGGCTGATGTGTGGGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: PCSMLGLGRIPVLVS*ILSTIRCRLMCGGN Trigger: GTTGCCCCCACACATCAGCCTGCATCGAATTGTGGACAAGATGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 90 bp | TGGCCTGAGAAAGTTCTCTTCCATAAGCATGGAGGCCAGGGTCACTaGCTCCAGACGGCTGGCTGCAAAGTTGCTGGAGATGAGCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: WPEKVLFHKHGGQGH*LQTAGCKVAGDEPV Trigger: GACTGGCTCATCTCCAGCAACTTTGCAGCCAGCCGTCTGGAGGCAGTGACCCTGGCCTCCATGCTTATGGAAGAGAACTTTCTCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CAA 90 bp | GCATCCCCGCTGTCATCTGAGGAGCCACTTTGGGCAGTCTTACTCCAAAGCCATCATCGTGCCTTCCAGTaGTGGACAATGTGGCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: ASPLSSEEPLWAVLLQSHHRAFQ*WTMWPL Trigger: GAGGGGCCACATTGTCCACAACTGGAAGGCACGATG...ATGGCTTTGGAGTAAGACTGCCCAAAGTGGCTCCTCAGATGACAGCGGGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 90 bp | TGCAGGCTGATGTGTGGGGGCAACTTGAAGGAGTTCTTCAGTATGTaGAGTTGTTGGATCTTCCCTGGCTGCCCTGCATGGATAGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: CRLMCGGNLKEFFSM*SCWIFPGCPAWIAP Trigger: AGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTGCCCCCACACATCAGCCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 90 bp | GGAGTTCTTCAGTATGTGGAGTTGTTGGATCTTCCCTGGCTGCCCTaGATGGATAGCCCCTGTTATCTCAAAGGCCCAGGAGTCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: GVLQYVELLDLPWLP*MDSPCYLKGPGVSL Trigger: GAGAGAGACTCCTGGGCCTTTGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 90 bp | AGGAGCCCAGAAAGGTCTTTTTGTAGGTGCTTCCTTGCTCCATGTTaGGGCTTGGCCGGATTCCAGTGCTGGTGTCATGCATCTTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RSPERSFCRCFLAPC*GLAGFQCWCHASCP Trigger: TGGACAAGATGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAAAAGACCTTTCTGGGCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CAA 90 bp | CATCCCCGCTGTCATCTGAGGAGCCACTTTGGGCAGTCTTACTCCAAAGCCATGCTTCAGTATGTGGAGTaGTTGGATCTTCCCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HPRCHLRSHFGQSYSKAMLQYVE*LDLPWL Trigger: CAGCCAGGGAAGATCCAACAACTCCACATACTGAAG...CATGGCTTTGGAGTAAGACTGCCCAAAGTGGCTCCTCAGATGACAGCGGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 90 bp | TTCTTCAGTATGTGGAGTTGTTGGATCTTCCCTGGCTGCCCTGCATaGATAGCCCCTGTTATCTCAAAGGCCCAGGAGTCTCTCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: FFSMWSCWIFPGCPA*IAPVISKAQESLSS Trigger: AGAGGAGAGAGACTCCTGGGCCTTTGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CAA 90 bp | TCCACCACTGAGCCACATCCCCAGCCCAGTATCTTGTACTCCAGTTCTCCAGGAATGTGTGGGGGCAACTaGAAGGAGTTCTTCAGTATG | + |
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Preference number: 5 (lower is better) Translates to: STTEPHPQPSILYSSSPGMCGGN*KEFFSM Trigger: CATACTGAAGAACTCCTTCAAGTTGCCCCCACACAT...TCCTGGAGAACTGGAGTACAAGATACTGGGCTGGGGATGTGGCTCAGTGGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 90 bp | TTGAAGGAGTTCTTCAGTATGTGGAGTTGTTGGATCTTCCCTGGCTaGCCTGCATGGATAGCCCCTGTTATCTCAAAGGCCCAGGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LKEFFSMWSCWIFPG*PAWIAPVISKAQES Trigger: AGACTCCTGGGCCTTTGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 90 bp | CAACTTGAAGGAGTTCTTCAGTATGTGGAGTTGTTGGATCTTCCCTaGCTGCCCTGCATGGATAGCCCCTGTTATCTCAAAGGCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QLEGVLQYVELLDLP*LPCMDSPCYLKGPG Trigger: TCCTGGGCCTTTGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 90 bp | ATGTGTGGGGGCAACTTGAAGGAGTTCTTCAGTATGTGGAGTTGTTaGATCTTCCCTGGCTGCCCTGCATGGATAGCCCCTGTTATCTCA | + |
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Preference number: 5 (lower is better) Translates to: MCGGNLKEFFSMWSC*IFPGCPAWIAPVIS Trigger: TGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTGCCCCCACACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 90 bp | CAGAAAGGTCTTTTTGTAGGTGCTTCCTTGCTCCATGTTGGGGCTTaGCCGGATTCCAGTGCTGGTGTCATGCATCTTGTCCACAATTCG | + |
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Preference number: 5 (lower is better) Translates to: QKGLFVGASLLHVGA*PDSSAGVMHLVHNS Trigger: CGAATTGTGGACAAGATGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAAAAGACCTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAACCGGAGTTAGTGTTCCAACAGAGAAAGAGGTACTACTATTGTCCCCACGGCTGGCTGCAAAGTaGCTGGAGATGAGCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: QKTGVSVPTEKEVLLLSPRLAAK*LEMSQS Trigger: GGACTGGCTCATCTCCAGCAACTTTGCAGCCAGCCG...TGGGGACAATAGTAGTACCTCTTTCTCTGTTGGAACACTAACTCCGGTTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CAA 90 bp | ATAGGAAGGCAGAAGGAAATCATCGCATCCCCGCTGTCATCTGAGGAGCCACTTTTCCAGTTTTTCCTCTaGTGCCCCTGCTTGGATAGG | + |
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Preference number: 5 (lower is better) Translates to: IGRQKEIIASPLSSEEPLFQFFL*CPCLDR Trigger: CCTATCCAAGCAGGGGCACAAGAGGAAAAACTGGAA...AAGTGGCTCCTCAGATGACAGCGGGGATGCGATGATTTCCTTCTGCCTTCCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 90 bp | GCTGGTGTCATGCATCTTGTCCACAATTCGATGCAGGCTGATGTGTaGGGGCAACTTGAAGGAGTTCTTCAGTATGTGGAGTTGTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: AGVMHLVHNSMQADV*GQLEGVLQYVELLD Trigger: ATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTGCCCCCACACATCAGCCTGCATCGAATTGTGGACAAGATGCATGACACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CAA 90 bp | GTGTTCCAACAGAGAAAGAGGTACTACTATTGTCCCCAAAGACAGATTTCTGTCTTTGTAGGTGCTTCCTaGCTCCATGTTGGGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: VFQQRKRYYYCPQRQISVFVGAS*LHVGAW Trigger: CCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAA...GACAGAAATCTGTCTTTGGGGACAATAGTAGTACCTCTTTCTCTGTTGGAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS-3UTR CAA 90 bp | CCAAAGACAGATTTCTGTCCTGAAGAGCAAAGTCAAGATGCTGCCCACCTAACATTTGAAGAGATTTCCTaGGACATTCCCTTTAACTCC | + |
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Preference number: 5 (lower is better) Translates to: PKTDFCPEEQSQDAAHLTFEEIS*DIPFNS Trigger: GGAGTTAAAGGGAATGTCCAAGGAAATCTCTTCAAA...TGTTAGGTGGGCAGCATCTTGACTTTGCTCTTCAGGACAGAAATCTGTCTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 72 bp | GCCAGGGTCACTGCCTCCAGACGGCTGGCTGCAAAGTaGCTGGAGATGAGCCAGTCCACCAGGGAGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: ARVTASRRLAAK*LEMSQSTREEP Trigger: GGGCTCCTCCCTGGTGGACTGGCTCATCTCCAGCAACTTTGCAGCCAGCCGTCTGGAGGCAGTGACCCTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 72 bp | CAGGTGATGGTGCAGCCATCAAGGACAATCCTCCCCTaGGGCGGGGTTACTCGCCGGCCACCCTCTAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: QVMVQPSRTILP*GGVTRRPPSSL Trigger: CAAGCTAGAGGGTGGCCGGCGAGTAACCCCGCCCAAGGGGAGGATTGTCCTTGATGGCTGCACCATCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 90 bp | GTCCACCAGGGAGGAGCCCAGAAAGGTCTTTTTGTAGGTGCTTCCTaGCTCCATGTTGGGGCTTGGCCGGATTCCAGTGCTGGTGTCATG | + |
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Preference number: 6 (lower is better) Translates to: VHQGGAQKGLFVGAS*LHVGAWPDSSAGVM Trigger: CATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAAAAGACCTTTCTGGGCTCCTCCCTGGTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 72 bp | CCACCAGGGAGGAGCCCAGAAAGGTCTTTTTGTAGGTaGTTCCTTGCTCCATGTTGGGGCTTGGCCGGATTC | + |
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Preference number: 6 (lower is better) Translates to: PPGRSPERSFCR*FLAPCWGLAGF Trigger: GAATCCGGCCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAAAAGACCTTTCTGGGCTCCTCCCTGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | GCCAGAGCGAATAGCTCCCATGCTCCGGACCCCTACTaGCCTGAGAAAGTTCTCTTCCATAAGCATGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ARANSSHAPDPY*PEKVLFHKHGG Trigger: GCCTCCATGCTTATGGAAGAGAACTTTCTCAGGCCAGTAGGGGTCCGGAGCATGGGAGCTATTCGCTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 90 bp | TACAGGAGCGTGTTCTGCCGAAGGATGAACCATCGTGCCTTCCAGTaGTGGACAATGTGGCCCCTCTTGACGAGGAAGCCTTCCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: YRSVFCRRMNHRAFQ*WTMWPLLTRKPSLS Trigger: GCTCAAGGAAGGCTTCCTCGTCAAGAGGGGCCACATTGTCCACAACTGGAAGGCACGATGGTTCATCCTTCGGCAGAACACGCTCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | TTCTGCCGAAGGATGAACCATCGTGCCTTCCAGTTGTaGACAATGTGGCCCCTCTTGACGAGGAAGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FCRRMNHRAFQL*TMWPLLTRKPS Trigger: GGAAGGCTTCCTCGTCAAGAGGGGCCACATTGTCCACAACTGGAAGGCACGATGGTTCATCCTTCGGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | CTTGCTCCATGTTGGGGCTTGGCCGGATTCCAGTGCTaGTGTCATGCATCTTGTCCACAATTCGATGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LAPCWGLAGFQC*CHASCPQFDAG Trigger: GCCTGCATCGAATTGTGGACAAGATGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 72 bp | GTGTTCTGCCGAAGGATGAACCATCGTGCCTTCCAGTaGTGGACAATGTGGCCCCTCTTGACGAGGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VFCRRMNHRAFQ*WTMWPLLTRKP Trigger: AGGCTTCCTCGTCAAGAGGGGCCACATTGTCCACAACTGGAAGGCACGATGGTTCATCCTTCGGCAGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 72 bp | GGAGGAGCCCAGAAAGGTCTTTTTGTAGGTGCTTCCTaGCTCCATGTTGGGGCTTGGCCGGATTCCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GGAQKGLFVGAS*LHVGAWPDSSA Trigger: AGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAAAAGACCTTTCTGGGCTCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 72 bp | ATACAGGAGCGTGTTCTGCCGAAGGATGAACCATCGTaGCTTCCAGTTGTGGACAATGTGGCCCCTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: IQERVLPKDEPS*LPVVDNVAPLD Trigger: GTCAAGAGGGGCCACATTGTCCACAACTGGAAGGCACGATGGTTCATCCTTCGGCAGAACACGCTCCTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 72 bp | CAGTATGTGGAGTTGTTGGATCTTCCCTGGCTGCCCTaGATGGATAGCCCCTGTTATCTCAAAGGCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: QYVELLDLPWLP*MDSPCYLKGPG Trigger: TCCTGGGCCTTTGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | ATGTGGAGTTGTTGGATCTTCCCTGGCTGCCCTGCATaGATAGCCCCTGTTATCTCAAAGGCCCAGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: MWSCWIFPGCPA*IAPVISKAQES Trigger: AGACTCCTGGGCCTTTGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 72 bp | ATGTTGGGGCTTGGCCGGATTCCAGTGCTGGTGTCATaGATCTTGTCCACAATTCGATGCAGGCTGATGTGT | + |
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Preference number: 6 (lower is better) Translates to: MLGLGRIPVLVS*ILSTIRCRLMC Trigger: ACACATCAGCCTGCATCGAATTGTGGACAAGATGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 72 bp | TTCCTTGCTCCATGTTGGGGCTTGGCCGGATTCCAGTaGTGGTGTCATGCATCTTGTCCACAATTCGATGCA | + |
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Preference number: 6 (lower is better) Translates to: FLAPCWGLAGFQ*WCHASCPQFDA Trigger: TGCATCGAATTGTGGACAAGATGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | GGCAACTTGAAGGAGTTCTTCAGTATGTGGAGTTGTTaGATCTTCCCTGGCTGCCCTGCATGGATAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: GNLKEFFSMWSC*IFPGCPAWIAP Trigger: AGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | ATGTGTGGGGGCAACTTGAAGGAGTTCTTCAGTATGTaGAGTTGTTGGATCTTCCCTGGCTGCCCTGCATGG | + |
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Preference number: 6 (lower is better) Translates to: MCGGNLKEFFSM*SCWIFPGCPAW Trigger: CCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTGCCCCCACACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | CTTTTTGTAGGTGCTTCCTTGCTCCATGTTGGGGCTTaGCCGGATTCCAGTGCTGGTGTCATGCATCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LFVGASLLHVGA*PDSSAGVMHLV Trigger: GACAAGATGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | GAAAGGTCTTTTTGTAGGTGCTTCCTTGCTCCATGTTaGGGCTTGGCCGGATTCCAGTGCTGGTGTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: ERSFCRCFLAPC*GLAGFQCWCHA Trigger: TGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAAAAGACCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 72 bp | TGGGGGCAACTTGAAGGAGTTCTTCAGTATGTGGAGTaGTTGGATCTTCCCTGGCTGCCCTGCATGGATAGC | + |
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Preference number: 6 (lower is better) Translates to: WGQLEGVLQYVE*LDLPWLPCMDS Trigger: GCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 90 bp | GATGTGTGGGGGCAACTTGAAGGAGTTCTTCAGTATGTGGAGTTGTaGGATCTTCCCTGGCTGCCCTGCATGGATAGCCCCTGTTATCTC | + |
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Preference number: 6 (lower is better) Translates to: DVWGQLEGVLQYVEL*DLPWLPCMDSPCYL Trigger: GAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTGCCCCCACACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 90 bp | GCTGATGTGTGGGGGCAACTTGAAGGAGTTCTTCAGTATGTGGAGTaGTTGGATCTTCCCTGGCTGCCCTGCATGGATAGCCCCTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: ADVWGQLEGVLQYVE*LDLPWLPCMDSPCY Trigger: ATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTGCCCCCACACATCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 90 bp | CCAGAAAGGTCTTTTTGTAGGTGCTTCCTTGCTCCATGTTGGGGCTaGGCCGGATTCCAGTGCTGGTGTCATGCATCTTGTCCACAATTC | + |
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Preference number: 6 (lower is better) Translates to: PERSFCRCFLAPCWG*AGFQCWCHASCPQF Trigger: GAATTGTGGACAAGATGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAAAAGACCTTTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS TCA 72 bp | CTAGCTTGTAATACAGGAGCGTGTTCTGCCGAAGGATaGACCATCGTGCCTTCCAGTTGTGGACAATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LACNTGACSAEG*TIVPSSCGQCG Trigger: GCCACATTGTCCACAACTGGAAGGCACGATGGTTCATCCTTCGGCAGAACACGCTCCTGTATTACAAGCTAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS GCA 72 bp | TTCTTCAGTATGTGGAGTTGTTGGATCTTCCCTGGCTaGCCTGCATGGATAGCCCCTGTTATCTCAAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: FFSMWSCWIFPG*PAWIAPVISKA Trigger: GGCCTTTGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 72 bp | TCTTTTTGTAGGTGCTTCCTTGCTCCATGTTGGGGCTaGGCCGGATTCCAGTGCTGGTGTCATGCATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SFCRCFLAPCWG*AGFQCWCHASC Trigger: ACAAGATGCATGACACCAGCACTGGAATCCGGCCAAGCCCCAACATGGAGCAAGGAAGCACCTACAAAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CAA 90 bp | TGCATCTTGTCCACAATTCGATGCAGGCTGATGTGTGGGGGCAACTaGAAGGAGTTCTTCAGTATGTGGAGTTGTTGGATCTTCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CILSTIRCRLMCGGN*KEFFSMWSCWIFPG Trigger: GCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCCTTCAAGTTGCCCCCACACATCAGCCTGCATCGAATTGTGGACAAGATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | GGAGTTCTTCAGTATGTGGAGTTGTTGGATCTTCCCTaGCTGCCCTGCATGGATAGCCCCTGTTATCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GVLQYVELLDLP*LPCMDSPCYLK Trigger: TTTGAGATAACAGGGGCTATCCATGCAGGGCAGCCAGGGAAGATCCAACAACTCCACATACTGAAGAACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | ATGCATCTTGTCCACAATTCGATGCAGGCTGATGTGTaGGGGCAACTTGAAGGAGTTCTTCAGTATGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: MHLVHNSMQADV*GQLEGVLQYVE Trigger: CTCCACATACTGAAGAACTCCTTCAAGTTGCCCCCACACATCAGCCTGCATCGAATTGTGGACAAGATGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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| CDS CCA 72 bp | AGACACAAGGGAACCACGAAGAGAAAACCCACCTACTaGCCTGTTCTCTTCTTTGGAAGGGTCATAGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: RHKGTTKRKPTY*PVLFFGRVIVV Trigger: CACTACTATGACCCTTCCAAAGAAGAGAACAGGCCAGTAGGTGGGTTTTCTCTTCGTGGTTCCCTTGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021544.8 |
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