Pregenerated sensors for PLEK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020120Ensembl transcript IDs: ENSMUST00000020321.13, ENSMUST00000102881.10
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCCAAGTGGTTTGGGGATGGAAGCTTCTGGGATTATTAGAATGTaGCACACACATCCTCACACTTTACACCCACTCCCAGATGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: RPSGLGMEASGIIRM*HTHPHTLHPLPDVH Trigger: ATGGACATCTGGGAGTGGGTGTAAAGTGTGAGGATGTGTGTGTCACATTCTAATAATCCCAGAAGCTTCCATCCCCAAACCACTTGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR TCA 90 bp | TCAGGTGAGAAGAAAACAGGAAGGAGAACTCAGAATACAAAGGGATaGAAGGCCTCATGCTCCTCCAGCCTTGAGACTTTCTGGACTATC | + |
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Preference number: 1 (lower is better) Translates to: SGEKKTGRRTQNTKG*KASCSSSLETFWTI Trigger: GATAGTCCAGAAAGTCTCAAGGCTGGAGGAGCATGAGGCCTTTCATCCCTTTGTATTCTGAGTTCTCCTTCCTGTTTTCTTCTCACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR GCA 90 bp | CCAGATATACCTCCGGAAGGATACACCCACCTTCTTCCTCCAACTTaGAAAGTTCCACCACCTCCTAATAGTCTTGAATCTACCAATGGA | + |
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Preference number: 1 (lower is better) Translates to: PDIPPEGYTHLLPPT*KVPPPPNSLESTNG Trigger: TCCATTGGTAGATTCAAGACTATTAGGAGGTGGTGGAACTTTGCAAGTTGGAGGAAGAAGGTGGGTGTATCCTTCCGGAGGTATATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR CCA 90 bp | ATTTGTGCTAGGGCTATGGTGATTACAGGCCAAGTGGTTTGGGGATaGAAGCTTCTGGGATTATTAGAATGTGACACACACATCCTCACA | + |
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Preference number: 1 (lower is better) Translates to: ICARAMVITGQVVWG*KLLGLLECDTHILT Trigger: TGTGAGGATGTGTGTGTCACATTCTAATAATCCCAGAAGCTTCCATCCCCAAACCACTTGGCCTGTAATCACCATAGCCCTAGCACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR CCA 90 bp | TGTGTCATTTGTGCTAGGGCTATGGTGATTACAGGCCAAGTGGTTTaGGGATGGAAGCTTCTGGGATTATTAGAATGTGACACACACATC | + |
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Preference number: 1 (lower is better) Translates to: CVICARAMVITGQVV*GWKLLGLLECDTHI Trigger: GATGTGTGTGTCACATTCTAATAATCCCAGAAGCTTCCATCCCCAAACCACTTGGCCTGTAATCACCATAGCCCTAGCACAAATGACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR CCA 90 bp | CGACTCAAAGTTCAAAGTCTGGCCTTGAATTCCATCTCTGTTATATaGGTTGTAGAATCTTGGCCAGTCAGATGCTCCTCAGTGATTCTC | + |
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Preference number: 1 (lower is better) Translates to: RLKVQSLALNSISVI*VVESWPVRCSSVIL Trigger: GAGAATCACTGAGGAGCATCTGACTGGCCAAGATTCTACAACCCATATAACAGAGATGGAATTCAAGGCCAGACTTTGAACTTTGAGTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR CCA 90 bp | TCAGGCTCAGATTTTTCTAAGGACTCAGCTGACATTCTTGTTCATTaGAGAAATGACATTGAGCAGAAGGGCAGAAGAGCAATGGACACT | + |
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Preference number: 1 (lower is better) Translates to: SGSDFSKDSADILVH*RNDIEQKGRRAMDT Trigger: AGTGTCCATTGCTCTTCTGCCCTTCTGCTCAATGTCATTTCTCCAATGAACAAGAATGTCAGCTGAGTCCTTAGAAAAATCTGAGCCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR CCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATaGTTACCTATGGGTAACCATTCATGTGTCATTTGTGCTAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LSLYMTSISTTVIYQ*LPMGNHSCVICARA Trigger: AGCCCTAGCACAAATGACACATGAATGGTTACCCATAGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR GCA 90 bp | TACACCCCTACAAGTAATGTCCCTATGCCACCAGTGGACACATCTTaGCTTTCCAGCTATTTGTTTACTTTTCTGTTTCATTATAAGATT | + |
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Preference number: 1 (lower is better) Translates to: YTPTSNVPMPPVDTS*LSSYLFTFLFHYKI Trigger: AATCTTATAATGAAACAGAAAAGTAAACAAATAGCTGGAAAGGCAAGATGTGTCCACTGGTGGCATAGGGACATTACTTGTAGGGGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR GCA 90 bp | ATTGAACTTTCCCAAAAACCCTACTACAGTGTTGCATCACTTACGTaGATTTTCACAGTAACAGAACAAAGTCCTAAATCAAGGCATTTT | + |
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Preference number: 1 (lower is better) Translates to: IELSQKPYYSVASLT*IFTVTEQSPKSRHF Trigger: AAAATGCCTTGATTTAGGACTTTGTTCTGTTACTGTGAAAATGCACGTAAGTGATGCAACACTGTAGTAGGGTTTTTGGGAAAGTTCAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | AGAATACCACACAGTGTTCAGCACTGGTCTTCACTAGTCATGTGCTGGACACTCCAGAATACAAAGGGATaGAAGGCCTCATGCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: RIPHSVQHWSSLVMCWTLQNTKG*KASCSS Trigger: GGAGGAGCATGAGGCCTTTCATCCCTTTGTATTCTG...GAGTGTCCAGCACATGACTAGTGAAGACCAGTGCTGAACACTGTGTGGTATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGGGAAAGATGACCCCTTaGTATGCTTTCCAGGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: RQESLQSDDNRRSPDIPPGKMTP*YAFQAK Trigger: TTTGGCCTGGAAAGCATAGCAAGGGGTCATCTTTCC...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | AACTTGTTCATTTCCTTGAAGAATACCACACAGTGTTCAGCACTGGTCTTCACTGATGACCCCTTGCTATaGTTTCCAGGCCAAACCCGT | + |
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Preference number: 2 (lower is better) Translates to: NLFISLKNTTQCSALVFTDDPLL*FPGQTR Trigger: ACGGGTTTGGCCTGGAAAGCATAGCAAGGGGTCATC...AGTGAAGACCAGTGCTGAACACTGTGTGGTATTCTTCAAGGAAATGAACAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGCAATATTGTTTGATTTaGGTGCTGGTGTGTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RQESLQSDDNRRSPDIPPQYCLI*VLVCGE Trigger: TTCCCCACACACCAGCACTCAAATCAAACAATATTG...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTCAGAATACAAAGGGATaGAAGGCCTCATGCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LSLYMTSISTTVIYQWLPQNTKG*KASCSS Trigger: GGAGGAGCATGAGGCCTTTCATCCCTTTGTATTCTG...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGGGGATTATTAGAATGTaGCACACACATCCTCACACT | + |
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Preference number: 2 (lower is better) Translates to: RQESLQSDDNRRSPDIPPGIIRM*HTHPHT Trigger: AGTGTGAGGATGTGTGTGTCACATTCTAATAATCCC...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR CCA 90 bp | AGAATACCACACAGTGTTCAGCACTGGTCTTCACTAGTCATGTGCTGGACACTCTCCATCTCTGTTATATaGGTTGTAGAATCTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RIPHSVQHWSSLVMCWTLSISVI*VVESWP Trigger: TGGCCAAGATTCTACAACCCATATAACAGAGATGGA...GAGTGTCCAGCACATGACTAGTGAAGACCAGTGCTGAACACTGTGTGGTATTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR CCA 90 bp | AGAATACCACACAGTGTTCAGCACTGGTCTTCACTAGTCATGTGCTGGACACTCACCAATGGTTACCTATaGGTAACCATTCATGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: RIPHSVQHWSSLVMCWTLTNGYL*VTIHVS Trigger: TGACACATGAATGGTTACCCATAGGTAACCATTGGT...GAGTGTCCAGCACATGACTAGTGAAGACCAGTGCTGAACACTGTGTGGTATTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR CAA 90 bp | GCTCTATCTCAGGCTCAGATTTTTCTAAGGACTCAGCTGACATTCTaGTTCATTGGAGAAATGACATTGAGCAGAAGGGCAGAAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: ALSQAQIFLRTQLTF*FIGEMTLSRRAEEQ Trigger: TTGCTCTTCTGCCCTTCTGCTCAATGTCATTTCTCCAATGAACAAGAATGTCAGCTGAGTCCTTAGAAAAATCTGAGCCTGAGATAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGAATTCATTCACTCCTTaGTCTATCTCAGGCTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: RQESLQSDDNRRSPDIPPNSFTP*SISGSD Trigger: ATCTGAGCCTGAGATAGAGCAAGGAGTGAATGAATT...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTTGGGTTGTAGAATCTTaGCCAGTCAGATGCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LSLYMTSISTTVIYQWLPWVVES*PVRCSS Trigger: TGAGGAGCATCTGACTGGCCAAGATTCTACAACCCA...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAACAGGCCAAGTGGTTTaGGGATGGAAGCTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: KVGIEFCLRTFLALGLMKTGQVV*GWKLLG Trigger: TCCCAGAAGCTTCCATCCCCAAACCACTTGGCCTGT...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR CCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGACCAATGGTTACCTATaGGTAACCATTCATGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: RQESLQSDDNRRSPDIPPTNGYL*VTIHVS Trigger: TGACACATGAATGGTTACCCATAGGTAACCATTGGT...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAATCTTCACTAGTCATGTaGTGGACACTCAGAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: YICAKLIPYTLSISQFSQSSLVM*WTLRGG Trigger: GCCACCTCTGAGTGTCCAGCACATGACTAGTGAAGA...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR CCA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAATGGGTTGTAGAATCTTaGCCAGTCAGATGCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: DIPCLCTSLCALFDAVTKWVVES*PVRCSS Trigger: TGAGGAGCATCTGACTGGCCAAGATTCTACAACCCA...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAGGAAAGATGACCCCTTaGTATGCTTTCCAGGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: YICAKLIPYTLSISQFSQGKMTP*YAFQAK Trigger: TTTGGCCTGGAAAGCATAGCAAGGGGTCATCTTTCC...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAACTTCTTCCTCCAACTTaGAAAGTTCCACCACCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KVGIEFCLRTFLALGLMKLLPPT*KVPPPP Trigger: AGGAGGTGGTGGAACTTTGCAAGTTGGAGGAAGAAG...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAACAATATTGTTTGATTTaGGTGCTGGTGTGTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: DIPCLCTSLCALFDAVTKQYCLI*VLVCGE Trigger: TTCCCCACACACCAGCACTCAAATCAAACAATATTG...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | AACTTGTTCATTTCCTTGAAGAATACCACACAGTGTTCAGCACTGGTCTTCACTCTATATCCACCACTGTaGTATACCAATGGTTACCTA | + |
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Preference number: 2 (lower is better) Translates to: NLFISLKNTTQCSALVFTLYPPL*YTNGYL Trigger: TAGGTAACCATTGGTATATCACAGTGGTGGATATAG...AGTGAAGACCAGTGCTGAACACTGTGTGGTATTCTTCAAGGAAATGAACAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAATAAGGTTGGAAAGTTaGAGCCAATGCTGTTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: KVGIEFCLRTFLALGLMKIRLES*SQCCCP Trigger: GGGACAACAGCATTGGCTTCAACTTTCCAACCTTAT...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTAATTCATTCACTCCTTaGTCTATCTCAGGCTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LSLYMTSISTTVIYQWLPNSFTP*SISGSD Trigger: ATCTGAGCCTGAGATAGAGCAAGGAGTGAATGAATT...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTTCCATCTCTGTTATATaGGTTGTAGAATCTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LSLYMTSISTTVIYQWLPSISVI*VVESWP Trigger: TGGCCAAGATTCTACAACCCATATAACAGAGATGGA...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTAGCCTTGAGACTTTCTaGACTATCTGTAAAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSLYMTSISTTVIYQWLPSLETF*TICKVS Trigger: AGAGACTTTACAGATAGTCCAGAAAGTCTCAAGGCT...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTAATATATTGTCACTTTaGGTCACTTCTCCACACAAG | + |
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Preference number: 2 (lower is better) Translates to: LSLYMTSISTTVIYQWLPNILSL*VTSPHK Trigger: CTTGTGTGGAGAAGTGACTCAAAGTGACAATATATT...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAACTATATCCACCACTGTaGTATACCAATGGTTACCTA | + |
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Preference number: 2 (lower is better) Translates to: DIPCLCTSLCALFDAVTKLYPPL*YTNGYL Trigger: TAGGTAACCATTGGTATATCACAGTGGTGGATATAG...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTGAAGACAAAACAGAATaGCGACTCAAAGTTCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LSLYMTSISTTVIYQWLPEDKTE*RLKVQS Trigger: ACTTTGAACTTTGAGTCGGCATTCTGTTTTGTCTTC...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAGCAGACAGGAATCATTaGAGAGTGATGATAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: KVGIEFCLRTFLALGLMKADRNH*RVMITG Trigger: TCCTGTTATCATCACTCTGCAATGATTCCTGTCTGC...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAAACTTGTTCATTTCCTTaGAGAATACCACACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: DIPCLCTSLCALFDAVTKTCSFP*RIPHSV Trigger: AACACTGTGTGGTATTCTTCAAGGAAATGAACAAGT...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAACTTGTTCATTTCCTTaGAGAATACCACACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: KVGIEFCLRTFLALGLMKTCSFP*RIPHSV Trigger: AACACTGTGTGGTATTCTTCAAGGAAATGAACAAGT...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAATGGAAGCTCTTGAAATaGATCTACACAGTAAATGGT | + |
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Preference number: 2 (lower is better) Translates to: KVGIEFCLRTFLALGLMKWKLLK*IYTVNG Trigger: ACCATTTACTGTGTAGATTCATTTCAAGAGCTTCCA...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAATTGACCAATAGTACATaGATTGTCTTCCAGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: KVGIEFCLRTFLALGLMKLTNST*IVFQRV Trigger: TACTCTCTGGAAGACAATTCATGTACTATTGGTCAA...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR-3UTR GCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAGAAGACAAAACAGAATaGCGACTCAAAGTTCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: YICAKLIPYTLSISQFSQEDKTE*RLKVQS Trigger: ACTTTGAACTTTGAGTCGGCATTCTGTTTTGTCTTC...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR TCA 72 bp | AAAGATCCTCTTGGGAGGCAGAGGCAGGCAGATTTCTaGGATCGAGGCCAGCCTGGTCTACAAAGTGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: KDPLGRQRQADF*DRGQPGLQSES Trigger: GGACTCACTTTGTAGACCAGGCTGGCCTCGATCTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGGATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102881.10 |
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| 3UTR-3UTR CAA 90 bp | AGAATACCACACAGTGTTCAGCACTGGTCTTCACTAGTCATGTGCTGGACACTCTACAGGCCAAGTGGTTaGGGGATGGAAGCTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RIPHSVQHWSSLVMCWTLYRPSG*GMEASG Trigger: CCCAGAAGCTTCCATCCCCAAACCACTTGGCCTGTA...GAGTGTCCAGCACATGACTAGTGAAGACCAGTGCTGAACACTGTGTGGTATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR TCA 72 bp | CACTTTGAGTCACTTCTCCACACAAGACAGAAGACCTaGTGTCCTGTTTGGTCGGGGAAAGATGACCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HFESLLHTRQKT*CPVWSGKDDPL Trigger: CAAGGGGTCATCTTTCCCCGACCAAACAGGACATCAGGTCTTCTGTCTTGTGTGGAGAAGTGACTCAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | AGAATACCACACAGTGTTCAGCACTGGTCTTCACTAGTCATGTGCTGGACACTCCATGCTCCTCCAGCCTaGAGACTTTCTGGACTATCT | + |
|
Preference number: 3 (lower is better) Translates to: RIPHSVQHWSSLVMCWTLHAPPA*RLSGLS Trigger: AGATAGTCCAGAAAGTCTCAAGGCTGGAGGAGCATG...GAGTGTCCAGCACATGACTAGTGAAGACCAGTGCTGAACACTGTGTGGTATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR GCA 72 bp | CCTCCGGAAGGATACACCCACCTTCTTCCTCCAACTTaGAAAGTTCCACCACCTCCTAATAGTCTTGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: PPEGYTHLLPPT*KVPPPPNSLES Trigger: AGATTCAAGACTATTAGGAGGTGGTGGAACTTTGCAAGTTGGAGGAAGAAGGTGGGTGTATCCTTCCGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTTACAGGCCAAGTGGTTaGGGGATGGAAGCTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLYMTSISTTVIYQWLPYRPSG*GMEASG Trigger: CCCAGAAGCTTCCATCCCCAAACCACTTGGCCTGTA...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR GCA 72 bp | AAGCCATTGGTTACACCCCTACAAGTAATGTCCCTATaGCACCAGTGGACACATCTTGCCTTTCCAGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: KPLVTPLQVMSL*HQWTHLAFPAI Trigger: AATAGCTGGAAAGGCAAGATGTGTCCACTGGTGGCATAGGGACATTACTTGTAGGGGTGTAACCAATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CCA 72 bp | TGTGCTAGGGCTATGGTGATTACAGGCCAAGTGGTTTaGGGATGGAAGCTTCTGGGATTATTAGAATGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CARAMVITGQVV*GWKLLGLLECD Trigger: GTCACATTCTAATAATCCCAGAAGCTTCCATCCCCAAACCACTTGGCCTGTAATCACCATAGCCCTAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR GCA 72 bp | CCAAAAGCATGTGAGGAAGGTGAAGACAAAACAGAATaGCGACTCAAAGTTCAAAGTCTGGCCTTGAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: PKACEEGEDKTE*RLKVQSLALNS Trigger: GGAATTCAAGGCCAGACTTTGAACTTTGAGTCGGCATTCTGTTTTGTCTTCACCTTCCTCACATGCTTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CCA 72 bp | TTGAATTCCATCTCTGTTATATGGGTTGTAGAATCTTaGCCAGTCAGATGCTCCTCAGTGATTCTCGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LNSISVIWVVES*PVRCSSVILGV Trigger: GACACCGAGAATCACTGAGGAGCATCTGACTGGCCAAGATTCTACAACCCATATAACAGAGATGGAATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CCA 72 bp | GTTCAAAGTCTGGCCTTGAATTCCATCTCTGTTATATaGGTTGTAGAATCTTGGCCAGTCAGATGCTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VQSLALNSISVI*VVESWPVRCSS Trigger: TGAGGAGCATCTGACTGGCCAAGATTCTACAACCCATATAACAGAGATGGAATTCAAGGCCAGACTTTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CCA 72 bp | GTTACACCCCTACAAGTAATGTCCCTATGCCACCAGTaGACACATCTTGCCTTTCCAGCTATTTGTTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: VTPLQVMSLCHQ*THLAFPAICLL Trigger: AAGTAAACAAATAGCTGGAAAGGCAAGATGTGTCCACTGGTGGCATAGGGACATTACTTGTAGGGGTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAACATGCTCCTCCAGCCTaGAGACTTTCTGGACTATCT | + |
|
Preference number: 3 (lower is better) Translates to: DIPCLCTSLCALFDAVTKHAPPA*RLSGLS Trigger: AGATAGTCCAGAAAGTCTCAAGGCTGGAGGAGCATG...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAGGGAAAGATGACCCCTaGCTATGCTTTCCAGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KVGIEFCLRTFLALGLMKGKDDP*LCFPGQ Trigger: TTGGCCTGGAAAGCATAGCAAGGGGTCATCTTTCCC...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | AACTTGTTCATTTCCTTGAAGAATACCACACAGTGTTCAGCACTGGTCTTCACTCTTCCCAAGAGTCCCTaGTCTCTGATCTTTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NLFISLKNTTQCSALVFTLPKSP*SLIFLS Trigger: AGACAGAAAGATCAGAGACAAGGGACTCTTGGGAAG...AGTGAAGACCAGTGCTGAACACTGTGTGGTATTCTTCAAGGAAATGAACAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAAGTCCTCCACAGTCATaGAGTGTAGTGAACCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KVGIEFCLRTFLALGLMKSPPQS*SVVNQG Trigger: GCCCTGGTTCACTACACTCAATGACTGTGGAGGACT...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCTTGCTCTATCTCAGGCTCAGATTTTTCTAAGGACTCAGCTGACATTCTTACAATATTGTTTGATTaGAGTGCTGGTGTGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TPCSISGSDFSKDSADILTILFD*SAGVWG Trigger: TCCCCACACACCAGCACTCAAATCAAACAATATTGT...AAGAATGTCAGCTGAGTCCTTAGAAAAATCTGAGCCTGAGATAGAGCAAGGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTATTGGAGAAATGACATaGAGCAGAAGGGCAGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLYMTSISTTVIYQWLPIGEMT*SRRAEE Trigger: CTCTTCTGCCCTTCTGCTCAATGTCATTTCTCCAAT...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTCAATTCATTCACTCCTaGCTCTATCTCAGGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSLYMTSISTTVIYQWLPQFIHS*LYLRLR Trigger: TCTGAGCCTGAGATAGAGCAAGGAGTGAATGAATTG...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CCA 72 bp | GATTTTTCTAAGGACTCAGCTGACATTCTTGTTCATTaGAGAAATGACATTGAGCAGAAGGGCAGAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DFSKDSADILVH*RNDIEQKGRRA Trigger: TGCTCTTCTGCCCTTCTGCTCAATGTCATTTCTCCAATGAACAAGAATGTCAGCTGAGTCCTTAGAAAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | AACTTGTTCATTTCCTTGAAGAATACCACACAGTGTTCAGCACTGGTCTTCACTACTCAGCTGACATTCTaGTTCATTGGAGAAATGACA | + |
|
Preference number: 3 (lower is better) Translates to: NLFISLKNTTQCSALVFTTQLTF*FIGEMT Trigger: TGTCATTTCTCCAATGAACAAGAATGTCAGCTGAGT...AGTGAAGACCAGTGCTGAACACTGTGTGGTATTCTTCAAGGAAATGAACAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAACAATTCATTCACTCCTaGCTCTATCTCAGGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YICAKLIPYTLSISQFSQQFIHS*LYLRLR Trigger: TCTGAGCCTGAGATAGAGCAAGGAGTGAATGAATTG...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR GCA 72 bp | ACAAGTAATGTCCCTATGCCACCAGTGGACACATCTTaGCTTTCCAGCTATTTGTTTACTTTTCTGTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSNVPMPPVDTS*LSSYLFTFLFH Trigger: ATGAAACAGAAAAGTAAACAAATAGCTGGAAAGGCAAGATGTGTCCACTGGTGGCATAGGGACATTACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAACAATATTGTTTGATTaGAGTGCTGGTGTGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KVGIEFCLRTFLALGLMKTILFD*SAGVWG Trigger: TCCCCACACACCAGCACTCAAATCAAACAATATTGT...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR-3UTR CAA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAACTCAGCTGACATTCTaGTTCATTGGAGAAATGACA | + |
|
Preference number: 3 (lower is better) Translates to: YICAKLIPYTLSISQFSQTQLTF*FIGEMT Trigger: TGTCATTTCTCCAATGAACAAGAATGTCAGCTGAGT...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR TCA 72 bp | ATACAGCCAACTTATCAAATAACTTGTTCATTTCCTTaGAGAATACCACACAGTGTTCAGCACTGGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IQPTYQITCSFP*RIPHSVQHWSS Trigger: TGAAGACCAGTGCTGAACACTGTGTGGTATTCTTCAAGGAAATGAACAAGTTATTTGATAAGTTGGCTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR TCA 72 bp | AACAGAAATCCACAGCTAGATTCAGCATCTGTCTTATaGGGACAAAGTATTCAGAATGAAATACAGCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: NRNPQLDSASVL*GQSIQNEIQPT Trigger: AGTTGGCTGTATTTCATTCTGAATACTTTGTCCTCATAAGACAGATGCTGAATCTAGCTGTGGATTTCTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CCA 72 bp | TATATGACCTCTATATCCACCACTGTGATATACCAATaGTTACCTATGGGTAACCATTCATGTGTCATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: YMTSISTTVIYQ*LPMGNHSCVIC Trigger: ACAAATGACACATGAATGGTTACCCATAGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | AGAATACCACACAGTGTTCAGCACTGGTCTTCACTAGTCATGTGCTGGACACTCAGATCTCCAGCAGGCTaGAGGTACCCTTCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIPHSVQHWSSLVMCWTLRSPAG*RYPSLS Trigger: GCTCAGTGAAGGGTACCTGCAGCCTGCTGGAGATCT...GAGTGTCCAGCACATGACTAGTGAAGACCAGTGCTGAACACTGTGTGGTATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | AGAATACCACACAGTGTTCAGCACTGGTCTTCACTAGTCATGTGCTGGACACTCGCGGGATCATCCCCTTaGGGCTATTGTCACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIPHSVQHWSSLVMCWTLAGSSP*GYCHFS Trigger: AGAAAAGTGACAATAGCCCCAAGGGGATGATCCCGC...GAGTGTCCAGCACATGACTAGTGAAGACCAGTGCTGAACACTGTGTGGTATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGGCGGGATCATCCCCTTaGGGCTATTGTCACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQESLQSDDNRRSPDIPPAGSSP*GYCHFS Trigger: AGAAAAGTGACAATAGCCCCAAGGGGATGATCCCGC...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR TCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAGGGAAGCGGAGATCATaGGGCCTTCCTGGCGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: YICAKLIPYTLSISQFSQGKRRS*GLPGDS Trigger: GGAATCGCCAGGAAGGCCTCATGATCTCCGCTTCCC...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR TCA 90 bp | AACTTGTTCATTTCCTTGAAGAATACCACACAGTGTTCAGCACTGGTCTTCACTACACAGCCTCTCAAGTaGACTGCTCCCAGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFISLKNTTQCSALVFTTQPLK*TAPRGS Trigger: AGATCCCCTGGGAGCAGTTCACTTGAGAGGCTGTGT...AGTGAAGACCAGTGCTGAACACTGTGTGGTATTCTTCAAGGAAATGAACAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGACACGAACATCCGTTTaGCAAAGTCTTGACAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQESLQSDDNRRSPDIPPTRTSV*QSLDKG Trigger: GCCCTTGTCAAGACTTTGGCAAACGGATGTTCGTGT...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR TCA 90 bp | AGAATACCACACAGTGTTCAGCACTGGTCTTCACTAGTCATGTGCTGGACACTCCTACCTGTGAGGCAGTaGTTAAAAACTTTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIPHSVQHWSSLVMCWTLLPVRQ*LKTFLS Trigger: GGACAAGAAAGTTTTTAATCACTGCCTCACAGGTAG...GAGTGTCCAGCACATGACTAGTGAAGACCAGTGCTGAACACTGTGTGGTATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | AGAATACCACACAGTGTTCAGCACTGGTCTTCACTAGTCATGTGCTGGACACTCTGGAAGAAGTGGTCCTaGTGTTTGGTTGTAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RIPHSVQHWSSLVMCWTLWKKWS*CLVVVI Trigger: AATCACTACAACCAAACAGCAGGACCACTTCTTCCA...GAGTGTCCAGCACATGACTAGTGAAGACCAGTGCTGAACACTGTGTGGTATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAACTCCTCCAGGAAGGCTaGCTGGAAGAAGTGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVGIEFCLRTFLALGLMKLLQEG*LEEVVL Trigger: CAGGACCACTTCTTCCAGGCAGCCTTCCTGGAGGAG...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGCTCCTTGGAAGTGGCTaGCTGCAAGTAATAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQESLQSDDNRRSPDIPPLLGSG*LQVIMN Trigger: GTTCATTATTACTTGCAGGCAGCCACTTCCAAGGAG...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTGCTCTATCTCAGGCTCAGATTTTTCTAAGGACTCAGCTGACATTCTTATCATGAGGCCTTCCTaGCGATTCCGAACTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPCSISGSDFSKDSADILIMRPS*RFRTSL Trigger: CAAGCTAGTTCGGAATCGCCAGGAAGGCCTCATGAT...AAGAATGTCAGCTGAGTCCTTAGAAAAATCTGAGCCTGAGATAGAGCAAGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CAA 72 bp | ATACAAAGGGATGAAAGGCCTCATGCTCCTCCAGCCTaGAGACTTTCTGGACTATCTGTAAAGTCTCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IQRDERPHAPPA*RLSGLSVKSLD Trigger: GTCTAGAGACTTTACAGATAGTCCAGAAAGTCTCAAGGCTGGAGGAGCATGAGGCCTTTCATCCCTTTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR TCA 90 bp | ACTCCTTGCTCTATCTCAGGCTCAGATTTTTCTAAGGACTCAGCTGACATTCTTCGTTTGCCAAAGTCTTaGCAAGGGCTAGTGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPCSISGSDFSKDSADILRLPKS*QGLVRV Trigger: TACTCTCACTAGCCCTTGTCAAGACTTTGGCAAACG...AAGAATGTCAGCTGAGTCCTTAGAAAAATCTGAGCCTGAGATAGAGCAAGGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR TCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGCTACCTGTGAGGCAGTaGTTAAAAACTTTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQESLQSDDNRRSPDIPPLPVRQ*LKTFLS Trigger: GGACAAGAAAGTTTTTAATCACTGCCTCACAGGTAG...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR TCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAACACAGCCTCTCAAGTaGACTGCTCCCAGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KVGIEFCLRTFLALGLMKTQPLK*TAPRGS Trigger: AGATCCCCTGGGAGCAGTTCACTTGAGAGGCTGTGT...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAAGATCTCCAGCAGGCTaGAGGTACCCTTCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YICAKLIPYTLSISQFSQRSPAG*RYPSLS Trigger: GCTCAGTGAAGGGTACCTGCAGCCTGCTGGAGATCT...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | AACTTGTTCATTTCCTTGAAGAATACCACACAGTGTTCAGCACTGGTCTTCACTGCTGCCTGGAAGAAGTaGTCCTGCTGTTTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NLFISLKNTTQCSALVFTAAWKK*SCCLVV Trigger: TACAACCAAACAGCAGGACCACTTCTTCCAGGCAGC...AGTGAAGACCAGTGCTGAACACTGTGTGGTATTCTTCAAGGAAATGAACAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | AACTTGTTCATTTCCTTGAAGAATACCACACAGTGTTCAGCACTGGTCTTCACTATCATGAGGCCTTCCTaGCGATTCCGAACTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLFISLKNTTQCSALVFTIMRPS*RFRTSL Trigger: CAAGCTAGTTCGGAATCGCCAGGAAGGCCTCATGAT...AGTGAAGACCAGTGCTGAACACTGTGTGGTATTCTTCAAGGAAATGAACAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTCATCTGCTGCATTCTTaGACAGATCTCCAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLYMTSISTTVIYQWLPHLLHS*TDLQQA Trigger: AGCCTGCTGGAGATCTGTCCAAGAATGCAGCAGATG...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CAA 72 bp | CTTGAATTCCATCTCTGTTATATGGGTTGTAGAATCTaGGCCAGTCAGATGCTCCTCAGTGATTCTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEFHLCYMGCRI*ASQMLLSDSRC Trigger: ACACCGAGAATCACTGAGGAGCATCTGACTGGCCAAGATTCTACAACCCATATAACAGAGATGGAATTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTACACGAACATCCGTTTaGCAAAGTCTTGACAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLYMTSISTTVIYQWLPTRTSV*QSLDKG Trigger: GCCCTTGTCAAGACTTTGGCAAACGGATGTTCGTGT...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CAA 72 bp | ACTCAGCTGACATTCTTGTTCATTGGAGAAATGACATaGAGCAGAAGGGCAGAAGAGCAATGGACACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TQLTFLFIGEMT*SRRAEEQWTLV Trigger: TACAAGTGTCCATTGCTCTTCTGCCCTTCTGCTCAATGTCATTTCTCCAATGAACAAGAATGTCAGCTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CAA 72 bp | CAGGCTCAGATTTTTCTAAGGACTCAGCTGACATTCTaGTTCATTGGAGAAATGACATTGAGCAGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QAQIFLRTQLTF*FIGEMTLSRRA Trigger: TGCCCTTCTGCTCAATGTCATTTCTCCAATGAACAAGAATGTCAGCTGAGTCCTTAGAAAAATCTGAGCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS-3UTR GCA 90 bp | ACTCCTTGCTCTATCTCAGGCTCAGATTTTTCTAAGGACTCAGCTGACATTCTTTTCAGTAAACATCCCTaGTTGATGATAACCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPCSISGSDFSKDSADILFSKHP*LMITPL Trigger: CAGAGGGGTTATCATCAAGCAGGGATGTTTACTGAA...AAGAATGTCAGCTGAGTCCTTAGAAAAATCTGAGCCTGAGATAGAGCAAGGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAGCTGCCTGGAAGAAGTaGTCCTGCTGTTTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KVGIEFCLRTFLALGLMKAAWKK*SCCLVV Trigger: TACAACCAAACAGCAGGACCACTTCTTCCAGGCAGC...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAACATCTGCTGCATTCTTaGACAGATCTCCAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YICAKLIPYTLSISQFSQHLLHS*TDLQQA Trigger: AGCCTGCTGGAGATCTGTCCAAGAATGCAGCAGATG...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| 3UTR CAA 72 bp | GTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTaGGGACTCATGAAACTAGAGGTCTTTTCAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGIEFCLRTFLA*GLMKLEVFSRA Trigger: TGCCCTTGAAAAGACCTCTAGTTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS-3UTR TCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAACGTTTGCCAAAGTCTTaGCAAGGGCTAGTGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KVGIEFCLRTFLALGLMKRLPKS*QGLVRV Trigger: TACTCTCACTAGCCCTTGTCAAGACTTTGGCAAACG...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTTGGAAGAAGTGGTCCTaGTGTTTGGTTGTAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LSLYMTSISTTVIYQWLPWKKWS*CLVVVI Trigger: AATCACTACAACCAAACAGCAGGACCACTTCTTCCA...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAAAAGGGTTTTCAGCTATaGCATCTGCTGCATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DIPCLCTSLCALFDAVTKKGFQL*HLLHSW Trigger: CCAAGAATGCAGCAGATGGCATAGCTGAAAACCCTT...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTTTCAGTAAACATCCCTaGTTGATGATAACCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLYMTSISTTVIYQWLPFSKHP*LMITPL Trigger: CAGAGGGGTTATCATCAAGCAGGGATGTTTACTGAA...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGATAATGAACTTCATCTaGTGTGATGATCTCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQESLQSDDNRRSPDIPPIMNFI*CDDLKE Trigger: CTCTTTGAGATCATCACAGCAGATGAAGTTCATTAT...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTGCTCTATCTCAGGCTCAGATTTTTCTAAGGACTCAGCTGACATTCTTGAAGAATCCACTGTCTaGAAAGTAGTAGAAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TPCSISGSDFSKDSADILEESTV*KVVESI Trigger: GATGCTTTCTACTACTTTCCAGACAGTGGATTCTTC...AAGAATGTCAGCTGAGTCCTTAGAAAAATCTGAGCCTGAGATAGAGCAAGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR TCA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAAGGTCTTCTCTCAGAATaGACTTTCTCACTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DIPCLCTSLCALFDAVTKGLLSE*TFSLSS Trigger: ACTGGAAAGTGAGAAAGTTCATTCTGAGAGAAGACC...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAAAGGGTTTTCAGCTATaGCATCTGCTGCATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YICAKLIPYTLSISQFSQKGFQL*HLLHSW Trigger: CCAAGAATGCAGCAGATGGCATAGCTGAAAACCCTT...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAACTCCTTGGAAGTGGCTaGCTGCAAGTAATAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVGIEFCLRTFLALGLMKLLGSG*LQVIMN Trigger: GTTCATTATTACTTGCAGGCAGCCACTTCCAAGGAG...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR TCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAGGTCTTCTCTCAGAATaGACTTTCTCACTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YICAKLIPYTLSISQFSQGLLSE*TFSLSS Trigger: ACTGGAAAGTGAGAAAGTTCATTCTGAGAGAAGACC...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR GCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAATCTTGTGGATTTTCTTaGAAACTTCTGGCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YICAKLIPYTLSISQFSQSCGFS*KLLASF Trigger: GAAGGAGGCCAGAAGTTTGCAAGAAAATCCACAAGA...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAGAATGGACCGTCTTGTaGATTTTCTTGCAAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVGIEFCLRTFLALGLMKEWTVL*IFLQTS Trigger: AGAAGTTTGCAAGAAAATCCACAAGACGGTCCATTC...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS-3UTR CCA 90 bp | AAAGTAGGCATTGAATTTTGTCTGAGGACATTCTTAGCTTTGGGACTCATGAAAGAAGAATCCACTGTCTaGAAAGTAGTAGAAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KVGIEFCLRTFLALGLMKEESTV*KVVESI Trigger: GATGCTTTCTACTACTTTCCAGACAGTGGATTCTTC...TTTCATGAGTCCCAAAGCTAAGAATGTCCTCAGACAAAATTCAATGCCTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS-3UTR GCA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAATAATGAACTTCATCTaGTGTGATGATCTCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YICAKLIPYTLSISQFSQIMNFI*CDDLKE Trigger: CTCTTTGAGATCATCACAGCAGATGAAGTTCATTAT...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| 3UTR CAA 72 bp | CATTACTGTTCATTAGACCATAAATATATTGTCACTTaGAGTCACTTCTCCACACAAGACAGAAGACCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HYCSLDHKYIVT*SHFSTQDRRPD Trigger: ATCAGGTCTTCTGTCTTGTGTGGAGAAGTGACTCAAAGTGACAATATATTTATGGTCTAATGAACAGTAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS TCA 90 bp | GAGGTTCTCTTCATCACTCTTCTTAACATCGTGACTGCTCTCTACTaGAGTCACCACACAGCCTCTCAAGTGAACTGCTCCCAGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: EVLFITLLNIVTALY*SHHTASQVNCSQGI Trigger: GATCCCCTGGGAGCAGTTCACTTGAGAGGCTGTGTGGTGACTTCAGTAGAGAGCAGTCACGATGTTAAGAAGAGTGATGAAGAGAACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS GCA 90 bp | CACCTGGATGGCTTTGATCCACTCAGTACGCTCCTTGGAAGTGGCTaGCTGCAAGTAATAATGAACTTCATCTGCTGTGATGATCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLDGFDPLSTLLGSG*LQVIMNFICCDDLK Trigger: TTTGAGATCATCACAGCAGATGAAGTTCATTATTACTTGCAGGCAGCCACTTCCAAGGAGCGTACTGAGTGGATCAAAGCCATCCAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS-3UTR CAA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGGGCGAATGGACCGTCTaGTGGATTTTCTTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: RQESLQSDDNRRSPDIPPGEWTV*WIFLQT Trigger: AGTTTGCAAGAAAATCCACAAGACGGTCCATTCGCC...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS-3UTR CAA 90 bp | AACTTGTTCATTTCCTTGAAGAATACCACACAGTGTTCAGCACTGGTCTTCACTCCATCTGCTGCATTCTaGGACAGATCTCCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NLFISLKNTTQCSALVFTPSAAF*DRSPAG Trigger: GCCTGCTGGAGATCTGTCCAAGAATGCAGCAGATGG...AGTGAAGACCAGTGCTGAACACTGTGTGGTATTCTTCAAGGAAATGAACAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS TCA 90 bp | TTGGTTGTAGTGATTTTTAACACGAACATCCGTTTGCCAAAGTCTTaGCAAGGGCTAGTGAGAGTACTTCCTTTCAGCGGGATCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVVVIFNTNIRLPKS*QGLVRVLPFSGIIP Trigger: GGGGATGATCCCGCTGAAAGGAAGTACTCTCACTAGCCCTTGTCAAGACTTTGGCAAACGGATGTTCGTGTTAAAAATCACTACAACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS-3UTR CAA 90 bp | ACTCCTTGCTCTATCTCAGGCTCAGATTTTTCTAAGGACTCAGCTGACATTCTTCCGTTTGCCAAAGTCTaGACAAGGGCTAGTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPCSISGSDFSKDSADILPFAKV*TRASES Trigger: ACTCTCACTAGCCCTTGTCAAGACTTTGGCAAACGG...AAGAATGTCAGCTGAGTCCTTAGAAAAATCTGAGCCTGAGATAGAGCAAGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS-3UTR CAA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGGTCTTGTGGATTTTCTaGCAAACTTCTGGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQESLQSDDNRRSPDIPPVLWIF*QTSGLL Trigger: AAGGAGGCCAGAAGTTTGCAAGAAAATCCACAAGAC...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CAA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAACCATCTGCTGCATTCTaGGACAGATCTCCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DIPCLCTSLCALFDAVTKPSAAF*DRSPAG Trigger: GCCTGCTGGAGATCTGTCCAAGAATGCAGCAGATGG...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CAA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGAGTAAACATCCCTGCTaGATGATAACCCCTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RQESLQSDDNRRSPDIPPSKHPC*MITPLN Trigger: ATTCAGAGGGGTTATCATCAAGCAGGGATGTTTACT...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS GCA 90 bp | GTCAATTGTCTCTGGCAGGCGAATGGACCGTCTTGTGGATTTTCTTaGAAACTTCTGGCCTCCTTCAATACATTTAATGGCTTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VNCLWQANGPSCGFS*KLLASFNTFNGFLD Trigger: ATCAAGAAAGCCATTAAATGTATTGAAGGAGGCCAGAAGTTTGCAAGAAAATCCACAAGACGGTCCATTCGCCTGCCAGAGACAATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS GCA 90 bp | ACGCTCCTTGGAAGTGGCTGCCTGCAAGTAATAATGAACTTCATCTaGTGTGATGATCTCAAAGAGGTTCTCTTCATCACTCTTCTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLLGSGCLQVIMNFI*CDDLKEVLFITLLN Trigger: GTTAAGAAGAGTGATGAAGAGAACCTCTTTGAGATCATCACAGCAGATGAAGTTCATTATTACTTGCAGGCAGCCACTTCCAAGGAGCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS-3UTR CAA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAACCGTTTGCCAAAGTCTaGACAAGGGCTAGTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DIPCLCTSLCALFDAVTKPFAKV*TRASES Trigger: ACTCTCACTAGCCCTTGTCAAGACTTTGGCAAACGG...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CAA 90 bp | AGACAGGAATCATTGCAGAGTGATGATAACAGGAGAAGCCCAGATATACCTCCGAAGTGGTCCTGCTGTTaGGTTGTAGTGATTTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RQESLQSDDNRRSPDIPPKWSCC*VVVIFN Trigger: GTTAAAAATCACTACAACCAAACAGCAGGACCACTT...CGGAGGTATATCTGGGCTTCTCCTGTTATCATCACTCTGCAATGATTCCTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CAA 90 bp | TTGTCCCTGTATATGACCTCTATATCCACCACTGTGATATACCAATGGTTACCTGTCTTGTGGATTTTCTaGCAAACTTCTGGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLYMTSISTTVIYQWLPVLWIF*QTSGLL Trigger: AAGGAGGCCAGAAGTTTGCAAGAAAATCCACAAGAC...AGGTAACCATTGGTATATCACAGTGGTGGATATAGAGGTCATATACAGGGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CAA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAACATTTAATGGCTTTCTaGATATCCCGAACCCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: DIPCLCTSLCALFDAVTKHLMAF*ISRTQA Trigger: CGCTTGGGTTCGGGATATCAAGAAAGCCATTAAATG...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CAA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAGGCGAATGGACCGTCTaGTGGATTTTCTTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: YICAKLIPYTLSISQFSQGEWTV*WIFLQT Trigger: AGTTTGCAAGAAAATCCACAAGACGGTCCATTCGCC...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS TCA 90 bp | TTGTTAGAAACCAGCCAGTCAATGACACCACTACCTGTGAGGCAGTaGTTAAAAACTTTCTTGTCCTTCTCCAGATTCAGTTCCTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LLETSQSMTPLPVRQ*LKTFLSFSRFSSFI Trigger: AATAAAGGAACTGAATCTGGAGAAGGACAAGAAAGTTTTTAATCACTGCCTCACAGGTAGTGGTGTCATTGACTGGCTGGTTTCTAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CAA 90 bp | GACATCCCTTGCTTATGTACGAGTTTATGTGCTTTGTTTGATGCTGTGACAAAAAAGTGGTCCTGCTGTTaGGTTGTAGTGATTTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: DIPCLCTSLCALFDAVTKKWSCC*VVVIFN Trigger: GTTAAAAATCACTACAACCAAACAGCAGGACCACTT...TTTTGTCACAGCATCAAACAAAGCACATAAACTCGTACATAAGCAAGGGATGTC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS-3UTR CAA 90 bp | TACATATGTGCTAAACTGATACCCTACACATTAAGCATCTCCCAGTTTAGTCAAAGTAAACATCCCTGCTaGATGATAACCCCTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YICAKLIPYTLSISQFSQSKHPC*MITPLN Trigger: ATTCAGAGGGGTTATCATCAAGCAGGGATGTTTACT...TTGACTAAACTGGGAGATGCTTAATGTGTAGGGTATCAGTTTAGCACATATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS TCA 72 bp | CTGCTCTCTACTGAAGTCACCACACAGCCTCTCAAGTaGACTGCTCCCAGGGGATCTTCACCCCCAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLSTEVTTQPLK*TAPRGSSPPAG Trigger: TCCTGCTGGGGGTGAAGATCCCCTGGGAGCAGTTCACTTGAGAGGCTGTGTGGTGACTTCAGTAGAGAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
||
| CDS GCA 72 bp | CCATCTGCTGCATTCTTGGACAGATCTCCAGCAGGCTaGAGGTACCCTTCACTGAGCAGGGAAGCGGAGATC | + |
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Preference number: 6 (lower is better) Translates to: PSAAFLDRSPAG*RYPSLSREAEI Trigger: GATCTCCGCTTCCCTGCTCAGTGAAGGGTACCTGCAGCCTGCTGGAGATCTGTCCAAGAATGCAGCAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS GCA 72 bp | ATCCCGAACCCAAGCGTCTCTCTCCTCCAGGAAGGCTaGCTGGAAGAAGTGGTCCTGCTGTTTGGTTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: IPNPSVSLLQEG*LEEVVLLFGCS Trigger: ACTACAACCAAACAGCAGGACCACTTCTTCCAGGCAGCCTTCCTGGAGGAGAGAGACGCTTGGGTTCGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS CAA 90 bp | GGGCTATCCAGGAAAGGGTTTTCAGCTATGCCATCTGCTGCATTCTaGGACAGATCTCCAGCAGGCTGCAGGTACCCTTCACTGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GLSRKGFSAMPSAAF*DRSPAGCRYPSLSR Trigger: CCTGCTCAGTGAAGGGTACCTGCAGCCTGCTGGAGATCTGTCCAAGAATGCAGCAGATGGCATAGCTGAAAACCCTTTCCTGGATAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS CCA 72 bp | TCACTGAGCAGGGAAGCGGAGATCATGAGGCCTTCCTaGCGATTCCGAACTAGCTTGTTAGAAACCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLSREAEIMRPS*RFRTSLLETSQ Trigger: CTGGCTGGTTTCTAACAAGCTAGTTCGGAATCGCCAGGAAGGCCTCATGATCTCCGCTTCCCTGCTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS CAA 90 bp | AGGGAAGCGGAGATCATGAGGCCTTCCTGGCGATTCCGAACTAGCTaGTTAGAAACCAGCCAGTCAATGACACCACTACCTGTGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: REAEIMRPSWRFRTS*LETSQSMTPLPVRQ Trigger: CTGCCTCACAGGTAGTGGTGTCATTGACTGGCTGGTTTCTAACAAGCTAGTTCGGAATCGCCAGGAAGGCCTCATGATCTCCGCTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS GCA 72 bp | AGGGCTATCCAGGAAAGGGTTTTCAGCTATGCCATCTaGTGCATTCTTGGACAGATCTCCAGCAGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RAIQERVFSYAI*CILGQISSRLQ Trigger: CTGCAGCCTGCTGGAGATCTGTCCAAGAATGCAGCAGATGGCATAGCTGAAAACCCTTTCCTGGATAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS CAA 72 bp | AGGAAAGGGTTTTCAGCTATGCCATCTGCTGCATTCTaGGACAGATCTCCAGCAGGCTGCAGGTACCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RKGFSAMPSAAF*DRSPAGCRYPS Trigger: TGAAGGGTACCTGCAGCCTGCTGGAGATCTGTCCAAGAATGCAGCAGATGGCATAGCTGAAAACCCTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS CAA 72 bp | GAGATCATGAGGCCTTCCTGGCGATTCCGAACTAGCTaGTTAGAAACCAGCCAGTCAATGACACCACTACCT | + |
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Preference number: 6 (lower is better) Translates to: EIMRPSWRFRTS*LETSQSMTPLP Trigger: AGGTAGTGGTGTCATTGACTGGCTGGTTTCTAACAAGCTAGTTCGGAATCGCCAGGAAGGCCTCATGATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS CAA 72 bp | TTCCTCCGGTGCCCCTGCTTCAGTAAACATCCCTGCTaGATGATAACCCCTCTGAATTCTTCTCTCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: FLRCPCFSKHPC*MITPLNSSLRM Trigger: CATTCTGAGAGAAGAATTCAGAGGGGTTATCATCAAGCAGGGATGTTTACTGAAGCAGGGGCACCGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS TCA 72 bp | TTCATCACTCTTCTTAACATCGTGACTGCTCTCTACTaGAGTCACCACACAGCCTCTCAAGTGAACTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FITLLNIVTALY*SHHTASQVNCS Trigger: GGAGCAGTTCACTTGAGAGGCTGTGTGGTGACTTCAGTAGAGAGCAGTCACGATGTTAAGAAGAGTGATGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS GCA 72 bp | GGCTTTGATCCACTCAGTACGCTCCTTGGAAGTGGCTaGCTGCAAGTAATAATGAACTTCATCTGCTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: GFDPLSTLLGSG*LQVIMNFICCD Trigger: ATCACAGCAGATGAAGTTCATTATTACTTGCAGGCAGCCACTTCCAAGGAGCGTACTGAGTGGATCAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS CAA 72 bp | AACTTCTGGCCTCCTTCAATACATTTAATGGCTTTCTaGATATCCCGAACCCAAGCGTCTCTCTCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: NFWPPSIHLMAF*ISRTQASLSSR Trigger: CCTGGAGGAGAGAGACGCTTGGGTTCGGGATATCAAGAAAGCCATTAAATGTATTGAAGGAGGCCAGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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| CDS TCA 72 bp | GTGATTTTTAACACGAACATCCGTTTGCCAAAGTCTTaGCAAGGGCTAGTGAGAGTACTTCCTTTCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VIFNTNIRLPKS*QGLVRVLPFSG Trigger: CCCGCTGAAAGGAAGTACTCTCACTAGCCCTTGTCAAGACTTTGGCAAACGGATGTTCGTGTTAAAAATCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020321.13 ENSMUST00000102881.10 |
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