RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022565

Ensembl transcript IDs: ENSMUST00000023226.13, ENSMUST00000054449.14, ENSMUST00000071869.12, ENSMUST00000072692.11, ENSMUST00000073418.13, ENSMUST00000074834.12, ENSMUST00000076442.12, ENSMUST00000080857.12, ENSMUST00000089610.10, ENSMUST00000165210.8, ENSMUST00000165453.8, ENSMUST00000166428.8, ENSMUST00000167754.8, ENSMUST00000169108.8, ENSMUST00000169289.8, ENSMUST00000169438.8, ENSMUST00000169714.8, ENSMUST00000171562.8, ENSMUST00000171634.8

Found 4243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCATCTCCTACCCTaGGTCTGGGTCTTTAGGGCCTGGGTACAAGGACACAGAAGGCAC +
Preference number: 1 (lower is better)
Translates to: QNPPAPPSQNVHLLP*VWVFRAWVQGHRRH
Trigger: GTGCCTTCTGTGTCCTTGTACCCAGGCCCTAAAGACCCAGACCCAGGGTAGGAGATGGACATTCTGGCTGGGCGGGGCTGGAGGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR CCA 90 bp TGGCCAGCAAAACCCACTGAATATACAGGACATTCAGAGATAGACTaGGGAGAAGCAGCTGGCTCAGGACAGAGGCCTCAAGAGCTGTCT +
Preference number: 1 (lower is better)
Translates to: WPAKPTEYTGHSEID*GEAAGSGQRPQELS
Trigger: AGACAGCTCTTGAGGCCTCTGTCCTGAGCCAGCTGCTTCTCCCCAGTCTATCTCTGAATGTCCTGTATATTCAGTGGGTTTTGCTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR TCA 90 bp AAGAGATGGTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTaGATATACAGGACATTCAGAGATAGACTGGGGAGAAGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: KRWLAWDLPLASKTH*IYRTFRDRLGRSSW
Trigger: CCAGCTGCTTCTCCCCAGTCTATCTCTGAATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAACCATCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR CCA 90 bp GTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACACAGGCTGTCTaGACATCGCATACATATATTAATGTGTTAGTCTGGTCTTTTTGG +
Preference number: 1 (lower is better)
Translates to: VTGPGPALFPKTQAV*TSHTYINVLVWSFW
Trigger: CCAAAAAGACCAGACTAACACATTAATATATGTATGCGATGTCCAGACAGCCTGTGTCTTGGGGAACAGGGCTGGCCCAGGCCCAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR CCA 90 bp ACACAGGCTGTCTGGACATCGCATACATATATTAATGTGTTAGTCTaGTCTTTTTGGTTAGATTTTAGGCACCGCTTGGGAGGAAGACAC +
Preference number: 1 (lower is better)
Translates to: TQAVWTSHTYINVLV*SFWLDFRHRLGGRH
Trigger: GTGTCTTCCTCCCAAGCGGTGCCTAAAATCTAACCAAAAAGACCAGACTAACACATTAATATATGTATGCGATGTCCAGACAGCCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGGAGCCCGGCCACATaGAGAGCGGGAAGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGSPAT*RAGRQD
Trigger: ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGGAGCCCGGCCACATaGAGAGCGGGAAGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGSPAT*RAGRQD
Trigger: ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCTCCAATGGCAGCTaGAGGAGCCAGGCGGGAGGC +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSNGS*RSQAGG
Trigger: GCCTCCCGCCTGGCTCCTGCAGCTGCCATTGGAGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGGAGCCCGGCCACATaGAGAGCGGGAAGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGSPAT*RAGRQD
Trigger: ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCTCCAATGGCAGCTaGAGGAGCCAGGCGGGAGGC +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSNGS*RSQAGG
Trigger: GCCTCCCGCCTGGCTCCTGCAGCTGCCATTGGAGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGTGGTCACTGGGCCTaGGCCAGCCCTGTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSGHWA*ASPVPQ
Trigger: TTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGTGGTCACTGGGCCTaGGCCAGCCCTGTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSGHWA*ASPVPQ
Trigger: TTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTGAGGCTGGAAGGCTaGAGCAGAGGCTCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLRLEG*SRGSGL
Trigger: GAGACCTGAGCCTCTGCTTCAGCCTTCCAGCCTCAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGGAGCCCGGCCACATaGAGAGCGGGAAGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGSPAT*RAGRQD
Trigger: ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCTCCAATGGCAGCTaGAGGAGCCAGGCGGGAGGC +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSNGS*RSQAGG
Trigger: GCCTCCCGCCTGGCTCCTGCAGCTGCCATTGGAGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGTGGTCACTGGGCCTaGGCCAGCCCTGTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGASGHWA*ASPVPQ
Trigger: TTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGACATCCAGTGGGGTTaGCTTAGAGGTCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWDIQWG*LRGLGA
Trigger: GGCCCCCAGACCTCTAAGCCAACCCCACTGGATGTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGACATCCAGTGGGGTTaGCTTAGAGGTCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQDIQWG*LRGLGA
Trigger: GGCCCCCAGACCTCTAAGCCAACCCCACTGGATGTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGGGGAGAAGCAGCTaGCTCAGGACAGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLGRSS*LRTEAS
Trigger: TGAGGCCTCTGTCCTGAGCCAGCTGCTTCTCCCCAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTGGGGAGAAGCAGCTaGCTCAGGACAGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLGRSS*LRTEAS
Trigger: TGAGGCCTCTGTCCTGAGCCAGCTGCTTCTCCCCAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGAGAACCCAGGAGATTaGAGTGGTCACTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQENPGD*SGHWAW
Trigger: CCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGAGAACCCAGGAGATTaGAGTGGTCACTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWENPGD*SGHWAW
Trigger: CCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCACCTGGCTGTGGTaGGTGGCAGGTAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGTWLW*VAGRKD
Trigger: ATCCTTTCTACCTGCCACTCACCACAGCCAGGTGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCACCTGGCTGTGGTaGGTGGCAGGTAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGTWLW*VAGRKD
Trigger: ATCCTTTCTACCTGCCACTCACCACAGCCAGGTGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGAGGCTGGAAGGCTaGAGCAGAGGCTCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGALRLEG*SRGSGL
Trigger: GAGACCTGAGCCTCTGCTTCAGCCTTCCAGCCTCAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTCAAGAGCTGTCTaGTCACACGACTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASRAV*SHDCPQ
Trigger: CTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGTGGTCACTGGGCCTaGGCCAGCCCTGTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSGHWA*ASPVPQ
Trigger: TTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGGGGAGAAGCAGCTaGCTCAGGACAGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGALGRSS*LRTEAS
Trigger: TGAGGCCTCTGTCCTGAGCCAGCTGCTTCTCCCCAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCCTTATCTTCCCATaGGGAAGGGGCTTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGLIFP*GRGFSG
Trigger: CCCAGAGAAGCCCCTTCCCCATGGGAAGATAAGGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGAGAACCCAGGAGATTaGAGTGGTCACTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAENPGD*SGHWAW
Trigger: CCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACTTACAAGGGGAGCTaGGGCTGGAAGGCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTYKGS*GWKAEA
Trigger: TGCTTCAGCCTTCCAGCCTCAGCTCCCCTTGTAAGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAAAAGAAGACCCCAGTaGCTCCACAGGGAGCCCGGC +
Preference number: 2 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSKRRPQ*LHREPG
Trigger: GCCGGGCTCCCTGTGGAGGCACTGGGGTCTTCTTTT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCTCAAGAGCTGTCTaGTCACACGACTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAASRAV*SHDCPQ
Trigger: CTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGACATCCAGTGGGGTTaGCTTAGAGGTCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVDIQWG*LRGLGA
Trigger: GGCCCCCAGACCTCTAAGCCAACCCCACTGGATGTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGACATCCAGTGGGGTTaGCTTAGAGGTCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSDIQWG*LRGLGA
Trigger: GGCCCCCAGACCTCTAAGCCAACCCCACTGGATGTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGGGGAGAAGCAGCTaGCTCAGGACAGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLGRSS*LRTEAS
Trigger: TGAGGCCTCTGTCCTGAGCCAGCTGCTTCTCCCCAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAAGAGATGGTTGGCCTaGGATCTTCCCTTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQKRWLA*DLPLAS
Trigger: GCTGGCCAAGGGAAGATCCCAGGCCAACCATCTCTT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAAGAGATGGTTGGCCTaGGATCTTCCCTTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWKRWLA*DLPLAS
Trigger: GCTGGCCAAGGGAAGATCCCAGGCCAACCATCTCTT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTGGAAGAGATGGTTaGCCTGGGATCTTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAGRDG*PGIFPW
Trigger: CCAAGGGAAGATCCCAGGCCAACCATCTCTTCCAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTGGAAGAGATGGTTaGCCTGGGATCTTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAGRDG*PGIFPW
Trigger: CCAAGGGAAGATCCCAGGCCAACCATCTCTTCCAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTAGGCTGGAAGAGATaGTTGGCCTGGGATCTTCCC +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVGWKR*LAWDLP
Trigger: GGGAAGATCCCAGGCCAACCATCTCTTCCAGCCTAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTTCTCTGGGTAGGCTaGAAGAGATGGTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLLWVG*KRWLAW
Trigger: CCAGGCCAACCATCTCTTCCAGCCTACCCAGAGAAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCCTTATCTTCCCATaGGGAAGGGGCTTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGLIFP*GRGFSG
Trigger: CCCAGAGAAGCCCCTTCCCCATGGGAAGATAAGGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGAGAACCCAGGAGATTaGAGTGGTCACTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVENPGD*SGHWAW
Trigger: CCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCACCTGGCTGTGGTaGGTGGCAGGTAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGTWLW*VAGRKD
Trigger: ATCCTTTCTACCTGCCACTCACCACAGCCAGGTGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGAGTGGTATAGGCTaGATGCCCAGCTCTGGATTC +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRSGIG*MPSSGF
Trigger: GAATCCAGAGCTGGGCATTCAGCCTATACCACTCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCTCAAGAGCTGTCTaGTCACACGACTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVASRAV*SHDCPQ
Trigger: CTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGTTGGCTTAGAGGTCTaGGGGCCTTTCCCAGATAGA +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWVGLEV*GPFPDR
Trigger: TCTATCTGGGAAAGGCCCCCAGACCTCTAAGCCAAC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTTGGCTTAGAGGTCTaGGGGCCTTTCCCAGATAGA +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVGLEV*GPFPDR
Trigger: TCTATCTGGGAAAGGCCCCCAGACCTCTAAGCCAAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAGGTAGACATCCAGTaGGGTTGGCTTAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQVDIQ*GWLRGL
Trigger: CAGACCTCTAAGCCAACCCCACTGGATGTCTACCTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTGGGATCTTCCCTTaGCCAGCAAAACCCACTGAA +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPGIFP*PAKPTE
Trigger: TTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTGGGATCTTCCCTTaGCCAGCAAAACCCACTGAA +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPGIFP*PAKPTE
Trigger: TTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTGGAAGAGATGGTTaGCCTGGGATCTTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAGRDG*PGIFPW
Trigger: CCAAGGGAAGATCCCAGGCCAACCATCTCTTCCAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTTCTCTGGGTAGGCTaGAAGAGATGGTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGALLWVG*KRWLAW
Trigger: CCAGGCCAACCATCTCTTCCAGCCTACCCAGAGAAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGGTCTTTAGGGCCTaGGTACAAGGACACAGAAGG +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWVFRA*VQGHRR
Trigger: CCTTCTGTGTCCTTGTACCCAGGCCCTAAAGACCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGGTCTTTAGGGCCTaGGTACAAGGACACAGAAGG +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWVFRA*VQGHRR
Trigger: CCTTCTGTGTCCTTGTACCCAGGCCCTAAAGACCCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGAGAACCCAGGAGATTaGAGTGGTCACTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRENPGD*SGHWAW
Trigger: CCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGCACCTGGCTGTGGTaGGTGGCAGGTAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGTWLW*VAGRKD
Trigger: ATCCTTTCTACCTGCCACTCACCACAGCCAGGTGCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGGAGTGGTATAGGCTaGATGCCCAGCTCTGGATTC +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGARSGIG*MPSSGF
Trigger: GAATCCAGAGCTGGGCATTCAGCCTATACCACTCCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACTTACAAGGGGAGCTaGGGCTGGAAGGCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTYKGS*GWKAEA
Trigger: TGCTTCAGCCTTCCAGCCTCAGCTCCCCTTGTAAGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGTGGTCACTGGGCCTaGGCCAGCCCTGTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSGHWA*ASPVPQ
Trigger: TTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACAGGTAGACATCCAGTaGGGTTGGCTTAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAQVDIQ*GWLRGL
Trigger: CAGACCTCTAAGCCAACCCCACTGGATGTCTACCTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCATTCAGAGATAGACTaGGGAGAAGCAGCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWHSEID*GEAAGS
Trigger: TGAGCCAGCTGCTTCTCCCCAGTCTATCTCTGAATG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCATTCAGAGATAGACTaGGGAGAAGCAGCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQHSEID*GEAAGS
Trigger: TGAGCCAGCTGCTTCTCCCCAGTCTATCTCTGAATG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTGGGATCTTCCCTTaGCCAGCAAAACCCACTGAA +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPGIFP*PAKPTE
Trigger: TTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTGGAAGAGATGGTTaGCCTGGGATCTTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAGRDG*PGIFPW
Trigger: CCAAGGGAAGATCCCAGGCCAACCATCTCTTCCAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTAGGCTGGAAGAGATaGTTGGCCTGGGATCTTCCC +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVGWKR*LAWDLP
Trigger: GGGAAGATCCCAGGCCAACCATCTCTTCCAGCCTAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTTCTCTGGGTAGGCTaGAAGAGATGGTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLLWVG*KRWLAW
Trigger: CCAGGCCAACCATCTCTTCCAGCCTACCCAGAGAAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGGAGTGGTATAGGCTaGATGCCCAGCTCTGGATTC +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRSGIG*MPSSGF
Trigger: GAATCCAGAGCTGGGCATTCAGCCTATACCACTCCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGGAGTGGTATAGGCTaGATGCCCAGCTCTGGATTC +
Preference number: 2 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRSGIG*MPSSGF
Trigger: GAATCCAGAGCTGGGCATTCAGCCTATACCACTCCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTTGGCTTAGAGGTCTaGGGGCCTTTCCCAGATAGA +
Preference number: 2 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVGLEV*GPFPDR
Trigger: TCTATCTGGGAAAGGCCCCCAGACCTCTAAGCCAAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTTGGCTTAGAGGTCTaGGGGCCTTTCCCAGATAGA +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVGLEV*GPFPDR
Trigger: TCTATCTGGGAAAGGCCCCCAGACCTCTAAGCCAAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAGGTAGACATCCAGTaGGGTTGGCTTAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQVDIQ*GWLRGL
Trigger: CAGACCTCTAAGCCAACCCCACTGGATGTCTACCTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAGGTAGACATCCAGTaGGGTTGGCTTAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQVDIQ*GWLRGL
Trigger: CAGACCTCTAAGCCAACCCCACTGGATGTCTACCTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACATTCAGAGATAGACTaGGGAGAAGCAGCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAHSEID*GEAAGS
Trigger: TGAGCCAGCTGCTTCTCCCCAGTCTATCTCTGAATG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCTGGGATCTTCCCTTaGCCAGCAAAACCCACTGAA +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPGIFP*PAKPTE
Trigger: TTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCACCTGGCTGTGGTaGGTGGCAGGTAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGTWLW*VAGRKD
Trigger: ATCCTTTCTACCTGCCACTCACCACAGCCAGGTGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCAGCAAAACCCACTaGATATACAGGACATTCAGA +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQASKTH*IYRTFR
Trigger: TCTGAATGTCCTGTATATTCAGTGGGTTTTGCTGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTTGGCTTAGAGGTCTaGGGGCCTTTCCCAGATAGA +
Preference number: 2 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVGLEV*GPFPDR
Trigger: TCTATCTGGGAAAGGCCCCCAGACCTCTAAGCCAAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATTTTAGGCACCGCTTaGGAGGAAGACACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQILGTA*EEDTFK
Trigger: TTTAAAGGTGTCTTCCTCCCAAGCGGTGCCTAAAAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATTTTAGGCACCGCTTaGGAGGAAGACACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWILGTA*EEDTFK
Trigger: TTTAAAGGTGTCTTCCTCCCAAGCGGTGCCTAAAAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGTGGTCACTGGGCCTaGGCCAGCCCTGTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISGHWA*ASPVPQ
Trigger: TTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCAGCAAAACCCACTaGATATACAGGACATTCAGA +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVASKTH*IYRTFR
Trigger: TCTGAATGTCCTGTATATTCAGTGGGTTTTGCTGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATTTTAGGCACCGCTTaGGAGGAAGACACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAILGTA*EEDTFK
Trigger: TTTAAAGGTGTCTTCCTCCCAAGCGGTGCCTAAAAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTAGTCTGGTCTTTTTaGTTAGATTTTAGGCACCGC +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLVWSF*LDFRHR
Trigger: GCGGTGCCTAAAATCTAACCAAAAAGACCAGACTAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTAGTCTGGTCTTTTTaGTTAGATTTTAGGCACCGC +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLVWSF*LDFRHR
Trigger: GCGGTGCCTAAAATCTAACCAAAAAGACCAGACTAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAAGACACAGGCTGTCTaGACATCGCATACATATATT +
Preference number: 2 (lower is better)
Translates to: AAAPREGFHRLEESLGLWKTQAV*TSHTYI
Trigger: AATATATGTATGCGATGTCCAGACAGCCTGTGTCTT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAAGACACAGGCTGTCTaGACATCGCATACATATATT +
Preference number: 2 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQKTQAV*TSHTYI
Trigger: AATATATGTATGCGATGTCCAGACAGCCTGTGTCTT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGACATCCAGTGGGGTTaGCTTAGAGGTCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIDIQWG*LRGLGA
Trigger: GGCCCCCAGACCTCTAAGCCAACCCCACTGGATGTC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTGGGGAGAAGCAGCTaGCTCAGGACAGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILGRSS*LRTEAS
Trigger: TGAGGCCTCTGTCCTGAGCCAGCTGCTTCTCCCCAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCACCTGGCTGTGGTaGGTGGCAGGTAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGTWLW*VAGRKD
Trigger: ATCCTTTCTACCTGCCACTCACCACAGCCAGGTGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCTCAAGAGCTGTCTaGTCACACGACTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASRAV*SHDCPQ
Trigger: CTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTAGTCTGGTCTTTTTaGTTAGATTTTAGGCACCGC +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGALVWSF*LDFRHR
Trigger: GCGGTGCCTAAAATCTAACCAAAAAGACCAGACTAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAAGACACAGGCTGTCTaGACATCGCATACATATATT +
Preference number: 2 (lower is better)
Translates to: QHPERGSTGLKSPWASGAKTQAV*TSHTYI
Trigger: AATATATGTATGCGATGTCCAGACAGCCTGTGTCTT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTAGTCTGGTCTTTTTaGTTAGATTTTAGGCACCGC +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLVWSF*LDFRHR
Trigger: GCGGTGCCTAAAATCTAACCAAAAAGACCAGACTAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTAGTCTGGTCTTTTTaGTTAGATTTTAGGCACCGC +
Preference number: 2 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLVWSF*LDFRHR
Trigger: GCGGTGCCTAAAATCTAACCAAAAAGACCAGACTAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTAGTCTGGTCTTTTTaGTTAGATTTTAGGCACCGC +
Preference number: 2 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLVWSF*LDFRHR
Trigger: GCGGTGCCTAAAATCTAACCAAAAAGACCAGACTAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAAGACACAGGCTGTCTaGACATCGCATACATATATT +
Preference number: 2 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSKTQAV*TSHTYI
Trigger: AATATATGTATGCGATGTCCAGACAGCCTGTGTCTT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAAGACACAGGCTGTCTaGACATCGCATACATATATT +
Preference number: 2 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVKTQAV*TSHTYI
Trigger: AATATATGTATGCGATGTCCAGACAGCCTGTGTCTT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCAGGTAGACATCCAGTaGGGTTGGCTTAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIQVDIQ*GWLRGL
Trigger: CAGACCTCTAAGCCAACCCCACTGGATGTCTACCTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATTTTAGGCACCGCTTaGGAGGAAGACACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: LEVWGPFPDRILPGETGVILGTA*EEDTFK
Trigger: TTTAAAGGTGTCTTCCTCCCAAGCGGTGCCTAAAAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTAGTCTGGTCTTTTTaGTTAGATTTTAGGCACCGC +
Preference number: 2 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLVWSF*LDFRHR
Trigger: GCGGTGCCTAAAATCTAACCAAAAAGACCAGACTAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAAGACACAGGCTGTCTaGACATCGCATACATATATT +
Preference number: 2 (lower is better)
Translates to: LEVWGPFPDRILPGETGVKTQAV*TSHTYI
Trigger: AATATATGTATGCGATGTCCAGACAGCCTGTGTCTT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATTTTAGGCACCGCTTaGGAGGAAGACACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIILGTA*EEDTFK
Trigger: TTTAAAGGTGTCTTCCTCCCAAGCGGTGCCTAAAAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTAGTCTGGTCTTTTTaGTTAGATTTTAGGCACCGC +
Preference number: 2 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILVWSF*LDFRHR
Trigger: GCGGTGCCTAAAATCTAACCAAAAAGACCAGACTAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAAGACACAGGCTGTCTaGACATCGCATACATATATT +
Preference number: 2 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIKTQAV*TSHTYI
Trigger: AATATATGTATGCGATGTCCAGACAGCCTGTGTCTT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR GCA 72 bp GTCCCTGGGCCTCTGGAGCAGGAGAAGTCTCAGATCTaGAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCC +
Preference number: 3 (lower is better)
Translates to: VPGPLEQEKSQI*RTLQPRPARMS
Trigger: GGACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCCCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGAGAACCCAGGAGATaGAAGTGGTCACTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGEPRR*KWSLGL
Trigger: CAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR CCA 72 bp CCAGCCCCGCCCAGCCAGAATGTCCATCTCCTACCCTaGGTCTGGGTCTTTAGGGCCTGGGTACAAGGACAC +
Preference number: 3 (lower is better)
Translates to: PAPPSQNVHLLP*VWVFRAWVQGH
Trigger: GTGTCCTTGTACCCAGGCCCTAAAGACCCAGACCCAGGGTAGGAGATGGACATTCTGGCTGGGCGGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR GCA 72 bp AGCAGCTGGCTCAGGACAGAGGCCTCAAGAGCTGTCTaGTCACACGACTGTCCCCAGTTCCCCTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: SSWLRTEASRAV*SHDCPQFPSAA
Trigger: AGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCTGTCCTGAGCCAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGAGAACCCAGGAGATaGAAGTGGTCACTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGEPRR*KWSLGL
Trigger: CAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGAGAACCCAGGAGATaGAAGTGGTCACTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGEPRR*KWSLGL
Trigger: CAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR CCA 72 bp GAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTaGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCC +
Preference number: 3 (lower is better)
Translates to: EGFHRLEESLGL*SRRSLRSAEPS
Trigger: GGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGAGAACCCAGGAGATaGAAGTGGTCACTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGEPRR*KWSLGL
Trigger: CAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR TCA 72 bp GCCCAGCTCTGGATTCTCCAAGGCACCTGGCTGTGGTaGGTGGCAGGTAGAAAGGATTTAGGGAGAACCCAG +
Preference number: 3 (lower is better)
Translates to: AQLWILQGTWLW*VAGRKDLGRTQ
Trigger: CTGGGTTCTCCCTAAATCCTTTCTACCTGCCACTCACCACAGCCAGGTGCCTTGGAGAATCCAGAGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGAGAACCCAGGAGATaGAAGTGGTCACTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGEPRR*KWSLGL
Trigger: CAGGCCCAGTGACCACTTCAATCTCCTGGGTTCTCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR TCA 72 bp AGAGGCTCAGGTCTCAGGGGAATAAGTATGGGGTGTTaGGCTACAAAGCATAGCTCCAATGGCAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: RGSGLRGISMGC*ATKHSSNGSCR
Trigger: CCTGCAGCTGCCATTGGAGCTATGCTTTGTAGCTCAACACCCCATACTTATTCCCCTGAGACCTGAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR CCA 72 bp CCTGGGCCAGCCCTGTTCCCCAAGACACAGGCTGTCTaGACATCGCATACATATATTAATGTGTTAGTCTGG +
Preference number: 3 (lower is better)
Translates to: PGPALFPKTQAV*TSHTYINVLVW
Trigger: CCAGACTAACACATTAATATATGTATGCGATGTCCAGACAGCCTGTGTCTTGGGGAACAGGGCTGGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR CCA 72 bp CTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTaGTATAGGCTGAATGCCCAGCTCTGGATTCTCCAA +
Preference number: 3 (lower is better)
Translates to: LSQIESSQERQE*YRLNAQLWILQ
Trigger: TTGGAGAATCCAGAGCTGGGCATTCAGCCTATACCACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR TCA 72 bp TTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTaGATATACAGGACATTCAGAGATAGACTGGGGAGA +
Preference number: 3 (lower is better)
Translates to: LAWDLPLASKTH*IYRTFRDRLGR
Trigger: TCTCCCCAGTCTATCTCTGAATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR CCA 72 bp AAACCCACTGAATATACAGGACATTCAGAGATAGACTaGGGAGAAGCAGCTGGCTCAGGACAGAGGCCTCAA +
Preference number: 3 (lower is better)
Translates to: KPTEYTGHSEID*GEAAGSGQRPQ
Trigger: TTGAGGCCTCTGTCCTGAGCCAGCTGCTTCTCCCCAGTCTATCTCTGAATGTCCTGTATATTCAGTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAGCCATGCGCAGCTTaGGGCGCTCGGCCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMQPCAA*GARPPR
Trigger: GCGCGGAGGCCGAGCGCCTCAAGCTGCGCATGGCTG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSARA*ARLISA
Trigger: GGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCGCTGCTGTGCGGTaGCCTCCGCCAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGAAVR*PPPAAA
Trigger: AGCGGCAGCTGGCGGAGGGCACCGCACAGCAGCGCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGRLLL*PLSQAP
Trigger: CGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGRLLL*PLSQAP
Trigger: CGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGCTGTGCTGGGTCTaGGGAGGCCCCGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWLCWV*GGPGAW
Trigger: CCATGCGCCGGGGCCTCCTCAGACCCAGCACAGCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCTGGCGGCCCAGCTaGTCGAGCTCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSWRPS*SSSRCR
Trigger: GCGGCAGCGTGAGCTCGAGCAGCTGGGCCGCCAGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGTGCGTCCACTGCTaGCTCCTCGCGCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLCVHC*LLAPRH
Trigger: GTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCCAGGCGCTGCTGTaGGGTGCCCTCCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSQALL*GALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGTAAGCACCCGCTCTaGCTCGGCCCGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSKHPL*LGPLAG
Trigger: GCCCGCCAGCGGGCCGAGGCAGAGCGGGTGCTTACT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGTAAGCACCCGCTCTaGCTCGGCCCGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSKHPL*LGPLAG
Trigger: GCCCGCCAGCGGGCCGAGGCAGAGCGGGTGCTTACT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCCCGGCGCCTCTaGTCCTCCTCTGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASRRL*SSSAAN
Trigger: GTTGGCGGCAGAGGAGGAGCAGAGGCGCCGGGAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGCCAGGCTCCTCTaGACGCGCTCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAARLL*TRSSAS
Trigger: GGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGACGCGCCGCCTCCTaGTCCGCTTCCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRRAAS*SASLRS
Trigger: GCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGACGCGCCGCCTCCTaGTCCGCTTCCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRRAAS*SASLRS
Trigger: GCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTGCCAGGGCCCGCTaGTGCGCCAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSARAR*CARSSS
Trigger: GGAGGAGGACCTGGCGCAGCAGCGGGCCCTGGCAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMALISS*RCRSAS
Trigger: GGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCTCAGCCTCGCGCTaGCGCCTCCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSASR*RLLASS
Trigger: GGAGGAGGCCAGGAGGCGGCAGCGCGAGGCTGAGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTCAGCCTCGCGCTaGCGCCTCCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSASR*RLLASS
Trigger: GGAGGAGGCCAGGAGGCGGCAGCGCGAGGCTGAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGGCCAGGCAGCCGCTaGCCTGCAGCAGAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRPGSR*PAAESA
Trigger: TGCGGACTCTGCTGCAGGGCAGCGGCTGCCTGGCCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCSAMR*AHSRAG
Trigger: CCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCSAMR*AHSRAG
Trigger: CCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTGCAGCCGTTTCTaGGCGGCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMACSRF*AASWAS
Trigger: GCTGGCCCAGGAGGCCGCCCAGAAACGGCTGCAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCTTCCGGAAGCGCTaGGCGTCCTCCTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCFRKR*ASSSAR
Trigger: CCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAAGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCGCTGCCGCCTCCTaGCCTCCTCCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRAAAS*PPPCWP
Trigger: TGGCCAGCATGGAGGAGGCCAGGAGGCGGCAGCGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCGCTGCCGCCTCCTaGCCTCCTCCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRAAAS*PPPCWP
Trigger: TGGCCAGCATGGAGGAGGCCAGGAGGCGGCAGCGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCAGGCTCCGGACCTaGTCTGGCCAGGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGRLRT*SGQGPH
Trigger: GTGGGGACCCTGGCCAGACCAGGTCCGGAGCCTGCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCAGCCATGCGCAGCTTaGGGCGCTCGGCCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQQPCAA*GARPPR
Trigger: GCGCGGAGGCCGAGCGCCTCAAGCTGCGCATGGCTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSARA*ARLISA
Trigger: GGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCGCTTCTGCGCTTCTaGCTCCTCAGCCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPLLRF*LLSPSA
Trigger: CGCGCTCGGGCTGAGGAGGCAGAAGCGCAGAAGCGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGCTTCTGCGCTTCTaGCTCCTCAGCCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPLLRF*LLSPSA
Trigger: CGCGCTCGGGCTGAGGAGGCAGAAGCGCAGAAGCGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCGCTGCTGTGCGGTaGCCTCCGCCAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGAAVR*PPPAAA
Trigger: AGCGGCAGCTGGCGGAGGGCACCGCACAGCAGCGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCGCTGCTGTGCGGTaGCCTCCGCCAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGAAVR*PPPAAA
Trigger: AGCGGCAGCTGGCGGAGGGCACCGCACAGCAGCGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLCSAA*SSRRRR
Trigger: GCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLCSAA*SSRRRR
Trigger: GCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTCTGCTCCTCCTCTaGCGCCAACTGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPLLLL*RQLPLP
Trigger: CGGCAGCGGCAGTTGGCGGCAGAGGAGGAGCAGAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGRLLL*PLSQAP
Trigger: CGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGRLLL*PLSQAP
Trigger: CGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAFSSA*SRFWAA
Trigger: GGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAFSSA*SRFWAA
Trigger: GGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTTGCGCAGCTTCTCTaGGGCCGCCTGCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLAQLL*GRLRLS
Trigger: GCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTTGCGCAGCTTCTCTaGGGCCGCCTGCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLAQLL*GRLRLS
Trigger: GCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGCCCGTGCGGAACTaGTGCAGCAGGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWPVRN*CSRSRR
Trigger: GCGACGGGACCTGCTGCAGCAGTTCCGCACGGGCCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACTGTCCAGCAGCTCTaGGGCGGGCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTVQQL*GGHEGT
Trigger: CGTGCCCTCGTGCCCGCCGCAGAGCTGCTGGACAGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACTGTCCAGCAGCTCTaGGGCGGGCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTVQQL*GGHEGT
Trigger: CGTGCCCTCGTGCCCGCCGCAGAGCTGCTGGACAGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGGCAGCCGCTGCCCTaGAGCAGAGTCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRQPLP*SRVRTE
Trigger: CTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGGCAGCCGCTGCCCTaGAGCAGAGTCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRQPLP*SRVRTE
Trigger: CTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAGTGGCATCAAAGCTaGCACGCCGGGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMQWHQS*HAGSRP
Trigger: GGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGTAGAGGTAGCCCCTaGGGACCTGCTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRRGSP*GPARSP
Trigger: GGGGCTGCGAGCAGGTCCGCAGGGGCTACCTCTACG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072692.11
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGGTGGCTGCCCAGCTaGGCCTCCACACTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRWLPS*ASTLGK
Trigger: CTTGCCCAGTGTGGAGGCCCAGCTGGGCAGCCACCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGTAGGCACCCCGGGTaGCAGGGGAGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGRHPG*QGRAGS
Trigger: AGAGCCAGCTCTCCCCTGCCACCCGGGGTGCCTACC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTAGGCACCCCGGGTaGCAGGGGAGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGRHPG*QGRAGS
Trigger: AGAGCCAGCTCTCCCCTGCCACCCGGGGTGCCTACC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGGCCGGGCAGGATaGTCTTCCCGCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVGRAG*SSRSSL
Trigger: CAGGCTGCTGCGGGAAGACCATCCTGCCCGGCCCAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTGGGCCGGGCAGGATaGTCTTCCCGCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVGRAG*SSRSSL
Trigger: CAGGCTGCTGCGGGAAGACCATCCTGCCCGGCCCAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTGCGTGGCTGCGGTaGCCTCGTGCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSAWLR*PRAVAG
Trigger: CCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCTCCTCCTCTACCTaGCTGCGCTGCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSSST*LRCRAA
Trigger: GGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSRAAS*AATLNR
Trigger: ACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCCGGGCCTGCTCCTaGGCAAGCTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRRACS*ASSFCC
Trigger: GCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGTCCAGGAGCTCACTaGCCGGCACAGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRPGAH*PAQGHG
Trigger: TCCGTGCCCCTGTGCCGGCCAGTGAGCTCCTGGACG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGTCCAGGAGCTCACTaGCCGGCACAGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRPGAH*PAQGHG
Trigger: TCCGTGCCCCTGTGCCGGCCAGTGAGCTCCTGGACG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACTTCCCCAGCTCGCTaGGCCACCTTGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTSPAR*ATLPEA
Trigger: GGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACTTCCCCAGCTCGCTaGGCCACCTTGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTSPAR*ATLPEA
Trigger: GGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCGCTTGGCCAGGCCTaGGAGGTGCCCCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPLGQA*EVPLVL
Trigger: GAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGCTTGGCCAGGCCTaGGAGGTGCCCCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPLGQA*EVPLVL
Trigger: GAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTGGTGCCACAGTGTaGCCAGGGCCTGATGCTGCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAGATV*PGPDAA
Trigger: CGCAGCATCAGGCCCTGGTCACACTGTGGCACCAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGGTGCCACAGTGTaGCCAGGGCCTGATGCTGCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAGATV*PGPDAA
Trigger: CGCAGCATCAGGCCCTGGTCACACTGTGGCACCAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCCAGCTCGCTCTCTaGTGCCTTGCGCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLQLAL*CLAQLG
Trigger: GCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCCAGCTCGCTCTCTaGTGCCTTGCGCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLQLAL*CLAQLG
Trigger: GCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACAGCCATGCGCAGCTTaGGGCGCTCGGCCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAQPCAA*GARPPR
Trigger: GCGCGGAGGCCGAGCGCCTCAAGCTGCGCATGGCTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSARA*ARLISA
Trigger: GGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTGGCGATCTCAGAGTaGGCCAAGGCAGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVAISE*AKAARC
Trigger: GCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGCGATCTCAGAGTaGGCCAAGGCAGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVAISE*AKAARC
Trigger: GCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGCTGTGCTGGGTCTaGGGAGGCCCCGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWLCWV*GGPGAW
Trigger: CCATGCGCCGGGGCCTCCTCAGACCCAGCACAGCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACAGGTCTTCGGCAGTaGGGCGGCGGCGCACGTAGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTGLRQ*GGGARS
Trigger: ACTACGTGCGCCGCCGCCTCACTGCCGAAGACCTGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCACTCCGTCCTGTaGACCAGGCACGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPHSVL*TRHAGH
Trigger: ATGCCCCGCGTGCCTGGTGCACAGGACGGAGTGAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCGCCACAAACCCGTaGAAGCTCTCCAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAATNP*KLSRDR
Trigger: CCGGTCCCTGGAGAGCTTGCACGGGTTTGTGGCGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGCCACAAACCCGTaGAAGCTCTCCAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAATNP*KLSRDR
Trigger: CCGGTCCCTGGAGAGCTTGCACGGGTTTGTGGCGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAATACTGGCTGCTGTaGCTCGGCCTGGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDEYWLL*LGLGPQ
Trigger: CTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGAATACTGGCTGCTGTaGCTCGGCCTGGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMEYWLL*LGLGPQ
Trigger: CTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCTGGCGGCCCAGCTaGTCGAGCTCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSWRPS*SSSRCR
Trigger: GCGGCAGCGTGAGCTCGAGCAGCTGGGCCGCCAGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCTGGCGGCCCAGCTaGTCGAGCTCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSWRPS*SSSRCR
Trigger: GCGGCAGCGTGAGCTCGAGCAGCTGGGCCGCCAGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTCTGCCCGCTGTTaGTCAGCCAGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSARC*SASRSS
Trigger: GGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRATSS*MRRCSS
Trigger: AGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTGTGCGTCCACTGCTaGCTCCTCGCGCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLCVHC*LLAPRH
Trigger: GTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGTGCGTCCACTGCTaGCTCCTCGCGCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLCVHC*LLAPRH
Trigger: GTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCATCCGGCTGCGTTCTaGAGCCTCCACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDHPAAF*SLHLLG
Trigger: GCCCAGCAGGTGGAGGCTGCAGAACGCAGCCGGATG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCATCCGGCTGCGTTCTaGAGCCTCCACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMHPAAF*SLHLLG
Trigger: GCCCAGCAGGTGGAGGCTGCAGAACGCAGCCGGATG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSAPPR*RSVVSS
Trigger: GCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGQLCL*LPFALA
Trigger: AGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGQLCL*LPFALA
Trigger: AGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVSRAT*TWRARS
Trigger: AGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVSRAT*TWRARS
Trigger: AGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTCCGCACTGCGCTGTaGCGTCTCCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMFRTAL*RLQGHL
Trigger: CAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTCCGCACTGCGCTGTaGCGTCTCCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDFRTAL*RLQGHL
Trigger: CAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAPLPH*AVPSPG
Trigger: CCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAPLPH*AVPSPG
Trigger: CCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCAGCTTGCTGCTGTaGCCGTCGCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLSLLL*PSLGLL
Trigger: GAGGAGGCCGAGCGACGGGCACAGCAGCAAGCTGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCAGCTTGCTGCTGTaGCCGTCGCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLSLLL*PSLGLL
Trigger: GAGGAGGCCGAGCGACGGGCACAGCAGCAAGCTGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCTCAGCCTCAGCTTaGTGCTGTGCCCGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRSASA*CCARRS
Trigger: CGAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCTCAGCCTCAGCTTaGTGCTGTGCCCGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRSASA*CCARRS
Trigger: CGAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCACCTCTTCTGCCTaGAGCCGCAGCCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMATSSA*SRSRSA
Trigger: AGCACTGCGGCTGCGGCTGCAGGCAGAAGAGGTGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCACCTCTTCTGCCTaGAGCCGCAGCCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDATSSA*SRSRSA
Trigger: AGCACTGCGGCTGCGGCTGCAGGCAGAAGAGGTGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCTTCTCCAGCTCCTaGTCCGCCAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCFSSS*SASSRC
Trigger: GCAGCGGGAGCTGGCGGAGCAGGAGCTGGAGAAGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCTTCTCCAGCTCCTaGTCCGCCAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCFSSS*SASSRC
Trigger: GCAGCGGGAGCTGGCGGAGCAGGAGCTGGAGAAGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCGCTGCTGTGCGGTaGCCTCCGCCAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGAAVR*PPPAAA
Trigger: AGCGGCAGCTGGCGGAGGGCACCGCACAGCAGCGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCCAGGCGCTGCTGTaGGGTGCCCTCCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSQALL*GALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRRISS*SAARRC
Trigger: GCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRRISS*SAARRC
Trigger: GCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCTGCTGCTCACCTTaGTCTGTCTCGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRCCSP*SVSARR
Trigger: CCTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCTGCTGCTCACCTTaGTCTGTCTCGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRCCSP*SVSARR
Trigger: CCTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGTAAGCACCCGCTCTaGCTCGGCCCGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSKHPL*LGPLAG
Trigger: GCCCGCCAGCGGGCCGAGGCAGAGCGGGTGCTTACT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGAAGGCCTCGTCTTCTaGCAGGCGCCTCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMEGLVF*QAPQAL
Trigger: GAGCGCCTGAGGCGCCTGGCAGAAGACGAGGCCTTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAAGGCCTCGTCTTCTaGCAGGCGCCTCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDEGLVF*QAPQAL
Trigger: GAGCGCCTGAGGCGCCTGGCAGAAGACGAGGCCTTC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRSLMP*AAGPGA
Trigger: AGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATCTCCTCCTCCACCTaGCGCCGCTGTCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDISSST*RRCRRV
Trigger: CACCCTGCGACAGCGGCGGCAGGTGGAGGAGGAGAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATCTCCTCCTCCACCTaGCGCCGCTGTCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMISSST*RRCRRV
Trigger: CACCCTGCGACAGCGGCGGCAGGTGGAGGAGGAGAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGCGTTGCTGCGAATaGGCCCCAGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPRCCE*APAPAP
Trigger: TGGAGCTGGAGCTGGGGCGCATTCGCAGCAACGCGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCGCGTTGCTGCGAATaGGCCCCAGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPRCCE*APAPAP
Trigger: TGGAGCTGGAGCTGGGGCGCATTCGCAGCAACGCGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTCCCGGCGCCTCTaGTCCTCCTCTGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASRRL*SSSAAN
Trigger: GTTGGCGGCAGAGGAGGAGCAGAGGCGCCGGGAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTGCCAGGCTCCTCTaGACGCGCTCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAARLL*TRSSAS
Trigger: GGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGRLLL*PLSQAP
Trigger: CGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPAPLP*AASLRP
Trigger: CGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGACGCGCCGCCTCCTaGTCCGCTTCCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRRAAS*SASLRS
Trigger: GCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGACGCGCCGCCTCCTaGTCCGCTTCCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRRAAS*SASLRS
Trigger: GCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTGCCAGGGCCCGCTaGTGCGCCAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSARAR*CARSSS
Trigger: GGAGGAGGACCTGGCGCAGCAGCGGGCCCTGGCAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATCTCCAGCTGCCGCTaGCGCTCGGCCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMISSCR*RSASRV
Trigger: GACTCTGGAGGCCGAGCGGCAGCGGCAGCTGGAGAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWALISS*RCRSAS
Trigger: GGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCTCAGCCTCGCGCTaGCGCCTCCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSASR*RLLASS
Trigger: GGAGGAGGCCAGGAGGCGGCAGCGCGAGGCTGAGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCTCAGCCTCGCGCTaGCGCCTCCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSASR*RLLASS
Trigger: GGAGGAGGCCAGGAGGCGGCAGCGCGAGGCTGAGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCCGTGCGGAACTGCTaGAGCAGGTCCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPVRNC*SRSRRC
Trigger: ACAGCGACGGGACCTGCTGCAGCAGTTCCGCACGGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGGCCAGGCAGCCGCTaGCCTGCAGCAGAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRPGSR*PAAESA
Trigger: TGCGGACTCTGCTGCAGGGCAGCGGCTGCCTGGCCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCCTTGCTGGACTGTaGCGCAGCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDALAGL*RSLQQP
Trigger: AGGCTGCTGGAGGCTGCGGCACAGTCCAGCAAGGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCCTTGCTGGACTGTaGCGCAGCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMALAGL*RSLQQP
Trigger: AGGCTGCTGGAGGCTGCGGCACAGTCCAGCAAGGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCATGGGGATGCAGGCTaGGGGGTCGCCGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDHGDAG*GVAGPS
Trigger: AGAAGGACCGGCGACCCCGCAGCCTGCATCCCCATG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGGGCCTCCACACTaGGCAAGTCCACGCCCCACT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAGPPH*ASPRPT
Trigger: AGTGGGGCGTGGACTTGCCCAGTGTGGAGGCCCAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTGGGCCTCCTGGTTaGGCGGCGGCACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPGPPG*AAAQES
Trigger: GCTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTTCCTGGGCCTCCTaGTTGGGCGGCGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASWAS*LGGGTR
Trigger: TCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGAAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTTCCTGGGCCTCCTaGTTGGGCGGCGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASWAS*LGGGTR
Trigger: TCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGAAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTAGCGACAGCTTCCTaGGCCTCCTGGTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLATAS*ASWLGG
Trigger: GCCGCCCAACCAGGAGGCCCAGGAAGCTGTCGCTAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCSAMR*AHSRAG
Trigger: CCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVAGTA*ASFSCS
Trigger: GGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMALAAS*HPAARR
Trigger: GCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDALAAS*HPAARR
Trigger: GCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSASSS*RFCVAA
Trigger: CGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSASSS*RFCVAA
Trigger: CGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTGCCTCGGCCCGCTaGCGGGCGGCATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSASAR*RAASSS
Trigger: AGAGGAGGATGCCGCCCGCCAGCGGGCCGAGGCAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCTGCCTCGGCCCGCTaGCGGGCGGCATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSASAR*RAASSS
Trigger: AGAGGAGGATGCCGCCCGCCAGCGGGCCGAGGCAGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCAGACGCCGCCGCTaGAAGGCCTCGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSRRRR*KASSSA
Trigger: GGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCAGACGCCGCCGCTaGAAGGCCTCGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSRRRR*KASSSA
Trigger: GGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGATGCCTTGCGCAGCTaGGCCAGGCGCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMDALRS*ARRSSM
Trigger: CATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCTGCAGCCGTTTCTaGGCGGCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQACSRF*AASWAS
Trigger: GCTGGCCCAGGAGGCCGCCCAGAAACGGCTGCAGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCTTCCGGAAGCGCTaGGCGTCCTCCTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCFRKR*ASSSAR
Trigger: CCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAAGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCTTCCGGAAGCGCTaGGCGTCCTCCTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCFRKR*ASSSAR
Trigger: CCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAAGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCCAGCTCCGCAATaGCCTCCCTCAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAPAPQ*PPSDAR
Trigger: CCGAGCGTCTGAGGGAGGCCATTGCGGAGCTGGAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCGCTGCCGCCTCCTaGCCTCCTCCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRAAAS*PPPCWP
Trigger: TGGCCAGCATGGAGGAGGCCAGGAGGCGGCAGCGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCTCTCGCAGCCGCTaGTTTTCCTCCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRSRSR*FSSARS
Trigger: GCTCCTGGCGGAGGAAAACCAGCGGCTGCGAGAGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCTCTCGCAGCCGCTaGTTTTCCTCCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRSRSR*FSSARS
Trigger: GCTCCTGGCGGAGGAAAACCAGCGGCTGCGAGAGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGGCAGTGCCTTCGTaGAAGCGGCCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWAVPS*KRPGWW
Trigger: CCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGGCAGTGCCTTCGTaGAAGCGGCCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWAVPS*KRPGWW
Trigger: CCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCCCAGTGCCAGCCTaGGCCTCCAGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCPVPA*ASSKAT
Trigger: TGTGGCCTTGCTGGAGGCCCAGGCTGGCACTGGGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCCCAGTGCCAGCCTaGGCCTCCAGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCPVPA*ASSKAT
Trigger: TGTGGCCTTGCTGGAGGCCCAGGCTGGCACTGGGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGTCCACAGTCAGCCTaGCGCTGGTGGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRPQSA*RWWQGR
Trigger: TCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGTCCACAGTCAGCCTaGCGCTGGTGGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRPQSA*RWWQGR
Trigger: TCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCACAGGCAGGCGGTaGCTGTGCACCGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSTGRR*LCTGSM
Trigger: CATCGACCCGGTGCACAGCCACCGCCTGCCTGTGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCACAGGCAGGCGGTaGCTGTGCACCGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSTGRR*LCTGSM
Trigger: CATCGACCCGGTGCACAGCCACCGCCTGCCTGTGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCTGCCCCTTTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLCPFE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCAAAGGGGCAGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGCTCCCCCTTCACTaGGTCCAGCAGGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPLPLH*VQQEAR
Trigger: ACGGGCTTCCTGCTGGACCCAGTGAAGGGGGAGCGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCGCTCCCCCTTCACTaGGTCCAGCAGGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPLPLH*VQQEAR
Trigger: ACGGGCTTCCTGCTGGACCCAGTGAAGGGGGAGCGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCTGCGCACCTCGCTaGGCTCCGACAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSCAPR*APTAGR
Trigger: ACGACCAGCTGTCGGAGCCCAGCGAGGTGCGCAGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCTGCGCACCTCGCTaGGCTCCGACAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSCAPR*APTAGR
Trigger: ACGACCAGCTGTCGGAGCCCAGCGAGGTGCGCAGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTCCGGACCTGGTCTaGCCAGGGTCCCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAPDLV*PGSPRW
Trigger: CCACCGTGGGGACCCTGGCCAGACCAGGTCCGGAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGTTCAGCTTCCTCCTaGGCCTGCCGCTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRSASS*ACRFCA
Trigger: AGCGCAGAAGCGGCAGGCTCAGGAGGAAGCTGAACG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAGCCATGCGCAGCTTaGGGCGCTCGGCCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQPCAA*GARPPR
Trigger: GCGCGGAGGCCGAGCGCCTCAAGCTGCGCATGGCTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAGCCATGCGCAGCTTaGGGCGCTCGGCCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQPCAA*GARPPR
Trigger: GCGCGGAGGCCGAGCGCCTCAAGCTGCGCATGGCTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCAGCCATGCGCAGCTTaGGGCGCTCGGCCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKQPCAA*GARPPR
Trigger: GCGCGGAGGCCGAGCGCCTCAAGCTGCGCATGGCTG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSARA*ARLISA
Trigger: GGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSARA*ARLISA
Trigger: GGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSARA*ARLISA
Trigger: GGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPSPAR*SARAAA
Trigger: TGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPSPAR*SARAAA
Trigger: TGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCAGCCACCGTGGTGTaGCCCTGTGCCAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSATVV*PCAKRC
Trigger: GCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCAGCCACCGTGGTGTaGCCCTGTGCCAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSATVV*PCAKRC
Trigger: GCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTCCTTGTAGCCGGTaGCGGCACGCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGPCSR*RHAQLT
Trigger: TGTCAGCTGAGCGTGCCGTCACCGGCTACAAGGACC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGTCCTTGTAGCCGGTaGCGGCACGCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGPCSR*RHAQLT
Trigger: TGTCAGCTGAGCGTGCCGTCACCGGCTACAAGGACC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGCAGCCTTATCTGTaGGTGGCAGGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWQPYL*VAGGAG
Trigger: GCCTGCGCCTCCTGCCACTCACAGATAAGGCTGCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGCAGCCTTATCTGTaGGTGGCAGGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWQPYL*VAGGAG
Trigger: GCCTGCGCCTCCTGCCACTCACAGATAAGGCTGCCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCAGCTCCTCCACAGTaGTCTGCTTGCGGAGACCGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPAPPQ*SACGDR
Trigger: GCGGTCTCCGCAAGCAGATCACTGTGGAGGAGCTGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGTCTGGGGGTCAGTaGTGCAGCGCTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPSGGQ*CSAPSA
Trigger: AGCTGATGGAGCGCTGCATCACTGACCCCCAGACGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCAGTGCTGGGGTCAATaGTGCCCCCGGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDQCWGQ*CPRCRL
Trigger: AAGCCTGCACCGGGGGCATCATTGACCCCAGCACTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCCAGGTCCCGCTCTaGCACCGAGAATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSQVPL*HRECLV
Trigger: GACCAGGCATTCTCGGTGGCAGAGCGGGACCTGGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCCAGGTCCCGCTCTaGCACCGAGAATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSQVPL*HRECLV
Trigger: GACCAGGCATTCTCGGTGGCAGAGCGGGACCTGGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCGCCTGGTTCAGCTaGTCCTCACACAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSAWFS*SSHSPA
Trigger: GGCTGGGCTGTGTGAGGAGCAGCTGAACCAGGCGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGSRRR*TVRVSQ
Trigger: CTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTGCGCTTTCTGTTaGTCAGCGATGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMACAFC*SAMRWA
Trigger: CGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCTGGCGGCCCAGCTaGTCGAGCTCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASWRPS*SSSRCR
Trigger: GCGGCAGCGTGAGCTCGAGCAGCTGGGCCGCCAGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCACGGCCTGGATCTaGTCTTGCCGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGTAWI*SCRLLA
Trigger: TGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCACGGCCTGGATCTaGTCTTGCCGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGTAWI*SCRLLA
Trigger: TGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSASCR*FSSAAS
Trigger: GGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGTGCGTCCACTGCTaGCTCCTCGCGCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALCVHC*LLAPRH
Trigger: GTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCGCTTCTGCTGCTGTaGGTCCACTGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMALLLL*VHCCLL
Trigger: GAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTGCAGCCTCCACCTaGTGGGCCTTGGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSAAST*WALAWI
Trigger: GATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCGCTTCTGCGCTTCTaGCTCCTCAGCCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPLLRF*LLSPSA
Trigger: CGCGCTCGGGCTGAGGAGGCAGAAGCGCAGAAGCGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCGGCCTCCTCGGCCTaGAGTCTCAGCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSASSA*SLSSSR
Trigger: CCTGGATGAGCTGAGACTGCAGGCCGAGGAGGCCGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCATTGGCCTTCAGCTaGCAGCGCTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSLAFS*QRSSSR
Trigger: GCGGGAGCTGGAGCGCTGGCAGCTGAAGGCCAATGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCATTGGCCTTCAGCTaGCAGCGCTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSLAFS*QRSSSR
Trigger: GCGGGAGCTGGAGCGCTGGCAGCTGAAGGCCAATGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLGIGL*QALLLC
Trigger: GCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLGIGL*QALLLC
Trigger: GCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGCGCTGCTGTGCGGTaGCCTCCGCCAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGAAVR*PPPAAA
Trigger: AGCGGCAGCTGGCGGAGGGCACCGCACAGCAGCGCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCCAGGCGCTGCTGTaGGGTGCCCTCCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASQALL*GALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSANCL*LLASSA
Trigger: GGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSANCL*LLASSA
Trigger: GGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLCSAA*SSRRRR
Trigger: GCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTCTGCTCCTCCTCTaGCGCCAACTGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPLLLL*RQLPLP
Trigger: CGGCAGCGGCAGTTGGCGGCAGAGGAGGAGCAGAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCTCCCGGCGCCTCTaGTCCTCCTCTGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAASRRL*SSSAAN
Trigger: GTTGGCGGCAGAGGAGGAGCAGAGGCGCCGGGAGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTGCCAGGCTCCTCTaGACGCGCTCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAARLL*TRSSAS
Trigger: GGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGRLLL*PLSQAP
Trigger: CGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAFSSA*SRFWAA
Trigger: GGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAFSSA*SRFWAA
Trigger: GGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTTGCGCAGCTTCTCTaGGGCCGCCTGCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLAQLL*GRLRLS
Trigger: GCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTTGCGCAGCTTCTCTaGGGCCGCCTGCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLAQLL*GRLRLS
Trigger: GCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLLFQR*LLCLGP
Trigger: CGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLLFQR*LLCLGP
Trigger: CGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSTWLR*RAASVT
Trigger: GGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSTWLR*RAASVT
Trigger: GGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSFCC*SSSASA
Trigger: GGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSFCC*SSSASA
Trigger: GGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAALISS*RCRSAS
Trigger: GGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCATCTGCTGCTGCTaGCGCTGCTGCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSICCC*RCCSSR
Trigger: GCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGATGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCATCTGCTGCTGCTaGCGCTGCTGCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSICCC*RCCSSR
Trigger: GCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGATGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCAGGAAGCCCGAGGCTaGCTGGGCCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDQEARG*LGLQQD
Trigger: ATCTTGCTGGAGGCCCAGGCAGCCTCGGGCTTCCTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGCCCGTGCGGAACTaGTGCAGCAGGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWPVRN*CSRSRR
Trigger: GCGACGGGACCTGCTGCAGCAGTTCCGCACGGGCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACTGTCCAGCAGCTCTaGGGCGGGCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTVQQL*GGHEGT
Trigger: CGTGCCCTCGTGCCCGCCGCAGAGCTGCTGGACAGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCAGGGTCGATGATATaGCCAGTGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAGSMI*PVPAWA
Trigger: GGCCCAGGCTGGCACTGGGCATATCATCGACCCTGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAGGGTCGATGATATaGCCAGTGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAGSMI*PVPAWA
Trigger: GGCCCAGGCTGGCACTGGGCATATCATCGACCCTGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGGCAGCCGCTGCCCTaGAGCAGAGTCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRQPLP*SRVRTE
Trigger: CTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGCAGCCGCTGCCCTaGAGCAGAGTCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRQPLP*SRVRTE
Trigger: CTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGGCCAGGCAGCCGCTaGCCTGCAGCAGAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARPGSR*PAAESA
Trigger: TGCGGACTCTGCTGCAGGGCAGCGGCTGCCTGGCCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTCCTGTGGCTAGCTaGGCATCCAGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPPVAS*ASSSLS
Trigger: GCTGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCCTGTGGCTAGCTaGGCATCCAGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPPVAS*ASSSLS
Trigger: GCTGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGGTGGCTGCCTGTaGTTCCAGGAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAGGCL*FQELKG
Trigger: GCCTTTGAGCTCCTGGAAGCACAGGCAGCCACCGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCACCACGCGGCGCTTaGGCACTGAGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSPRGA*ALRTWR
Trigger: CCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTCTGTGTCCAGGATaGCGGCCACGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSLCPG*RPRGQS
Trigger: AGACTGGCCCCGTGGCCGGCATCCTGGACACAGAGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAGCTTCTGGGCTGTaGGGGCATCCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAASGL*GHPQCH
Trigger: GTGGCACTGTGGATGCCCGCACAGCCCAGAAGCTGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAGTGGCATCAAAGCTaGCACGCCGGGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQWHQS*HAGSRP
Trigger: GGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCAGTGGCATCAAAGCTaGCACGCCGGGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQQWHQS*HAGSRP
Trigger: GGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCTGCAGGGTCACCTaGGTCACAGGGGCACCCACT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLCRVT*VTGAPT
Trigger: AGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGGTGGCTGCCCAGCTaGGCCTCCACACTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRWLPS*ASTLGK
Trigger: CTTGCCCAGTGTGGAGGCCCAGCTGGGCAGCCACCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGTAGGCACCCCGGGTaGCAGGGGAGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGRHPG*QGRAGS
Trigger: AGAGCCAGCTCTCCCCTGCCACCCGGGGTGCCTACC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGTAGGCACCCCGGGTaGCAGGGGAGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGRHPG*QGRAGS
Trigger: AGAGCCAGCTCTCCCCTGCCACCCGGGGTGCCTACC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTCCAGTGGGATGGCTaGGCAGGACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDFQWDG*AGPTSW
Trigger: CCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTCCAGTGGGATGGCTaGGCAGGACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMFQWDG*AGPTSW
Trigger: CCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCACCTTCCAGTGGGATaGCTGGGCAGGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMHLPVG*LGRTHQ
Trigger: CTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGTG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTGAGCACCTTCCAGTaGGATGGCTGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLSTFQ*DGWAGP
Trigger: GGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGAGCACCTTCCAGTaGGATGGCTGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLSTFQ*DGWAGP
Trigger: GGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGVLIQ*QPQTVH
Trigger: GTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACSAMR*AHSRAG
Trigger: CCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTPSAE*VQQVTA
Trigger: AGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCAGGGCCTTCTCCTaGCGCAGCTGTTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSRAFS*RSCSRA
Trigger: TGCGCGAGAACAGCTGCGCCAGGAGAAGGCCCTGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCAGGGCCTTCTCCTaGCGCAGCTGTTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSRAFS*RSCSRA
Trigger: TGCGCGAGAACAGCTGCGCCAGGAGAAGGCCCTGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASSSA*ALAWAC
Trigger: ACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTGCCGTTTGCGCTaGCTCTCATCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDACRLR*LSSCTC
Trigger: GCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCTGCGTGGCTGCGGTaGCCTCGTGCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSAWLR*PRAVAG
Trigger: CCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTGCGTGGCTGCGGTaGCCTCGTGCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSAWLR*PRAVAG
Trigger: CCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCTGCAGCCGTTTCTaGGCGGCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAACSRF*AASWAS
Trigger: GCTGGCCCAGGAGGCCGCCCAGAAACGGCTGCAGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCTCCTCCTCTACCTaGCTGCGCTGCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSSST*LRCRAA
Trigger: GGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSRAAS*AATLNR
Trigger: ACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSRAAS*AATLNR
Trigger: ACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGCCGGGCCTGCTCCTaGGCAAGCTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRRACS*ASSFCC
Trigger: GCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCTTCCGGAAGCGCTaGGCGTCCTCCTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACFRKR*ASSSAR
Trigger: CCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAAGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCGCTGCCGCCTCCTaGCCTCCTCCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARAAAS*PPPCWP
Trigger: TGGCCAGCATGGAGGAGGCCAGGAGGCGGCAGCGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVHPGR*AVPSWK
Trigger: CTTCCACGAAGGCACTGCCCAACGGCCGGGATGCAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVHPGR*AVPSWK
Trigger: CTTCCACGAAGGCACTGCCCAACGGCCGGGATGCAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTGGCTGTAGGTGACTaGCTCCTGGGTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLAVGD*LLGAGV
Trigger: GACCCCAGCACCCAGGAGCCAGTCACCTACAGCCAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGGCTGTAGGTGACTaGCTCCTGGGTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLAVGD*LLGAGV
Trigger: GACCCCAGCACCCAGGAGCCAGTCACCTACAGCCAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCAAGCCGGTCAGCTaGTCAGACCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLKPVS*SDRHRC
Trigger: ACAGCGGTGCCGGTCTGACCAGCTGACCGGCTTGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCAGCAGCAGCATCTaGCCGCTGGGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSSSI*PLGSSR
Trigger: CCGTGATGACCCCAGCGGCCAGATGCTGCTGCTGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCAGCAGCAGCATCTaGCCGCTGGGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSSSI*PLGSSR
Trigger: CCGTGATGACCCCAGCGGCCAGATGCTGCTGCTGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGACACAGGCCCGTCTaGGGGTCAGTGATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRHRPV*GSVMQR
Trigger: GCGCTGCATCACTGACCCCCAGACGGGCCTGTGTCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGACACAGGCCCGTCTaGGGGTCAGTGATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRHRPV*GSVMQR
Trigger: GCGCTGCATCACTGACCCCCAGACGGGCCTGTGTCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGACCAGGAGGCTAGCTaGGTCCTGGGGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMDQEAS*VLGPAE
Trigger: TTCTGCTGGCCCCAGGACCCAGCTAGCCTCCTGGTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTCCAGCAGCCGCTaGCCGGTGATGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASSSR*PVMLST
Trigger: GGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCCAGCAGCCGCTaGCCGGTGATGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASSSR*PVMLST
Trigger: GGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCAGGTATCACCATaGCGACAGGGCGGCGCACAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVQVSP*RQGGAH
Trigger: GTGTGCGCCGCCCTGTCGCCATGGTGATACCTGCAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTGCAGGTATCACCATaGCGACAGGGCGGCGCACAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVQVSP*RQGGAH
Trigger: GTGTGCGCCGCCCTGTCGCCATGGTGATACCTGCAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTCTCGTTCATCTGTaGCTGGGGCAGGCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGLVHL*LGQAPD
Trigger: GTCCGGAGCCTGCCCCAGCCACAGATGAACGAGACC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCCAGGGGGAATCTTaGGCTGGCCCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSQGES*AGPLVL
Trigger: CAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCGCTTGGCCAGGCCTaGGAGGTGCCCCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPLGQA*EVPLVL
Trigger: GAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRCWNH*APSSGM
Trigger: CATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRCWNH*APSSGM
Trigger: CATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGTGTGACCAGGGCCTaGTGCTGCGCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSVTRA*CCASSL
Trigger: TAGACTGGAGGCGCAGCATCAGGCCCTGGTCACACT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGTGTGACCAGGGCCTaGTGCTGCGCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSVTRA*CCASSL
Trigger: TAGACTGGAGGCGCAGCATCAGGCCCTGGTCACACT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTGGTGCCACAGTGTaGCCAGGGCCTGATGCTGCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAGATV*PGPDAA
Trigger: CGCAGCATCAGGCCCTGGTCACACTGTGGCACCAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCCAGCTCGCTCTCTaGTGCCTTGCGCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLQLAL*CLAQLG
Trigger: GCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSARA*ARLISA
Trigger: GGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTGGCGATCTCAGAGTaGGCCAAGGCAGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVAISE*AKAARC
Trigger: GCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGTGGCGATCTCAGAGTaGGCCAAGGCAGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWVAISE*AKAARC
Trigger: GCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCAC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACGGCACGCTCAGCTaGCAGCAGTTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDDGTLS*QQFVVQ
Trigger: CTGCACCACAAACTGCTGTCAGCTGAGCGTGCCGTC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGACGGCACGCTCAGCTaGCAGCAGTTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMDGTLS*QQFVVQ
Trigger: CTGCACCACAAACTGCTGTCAGCTGAGCGTGCCGTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGAGCTGGCTGTAGGTaGCTGGCTCCTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGAGCR*LAPGCW
Trigger: CCAGCACCCAGGAGCCAGTCACCTACAGCCAGCTCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGCTGTGCTGGGTCTaGGGAGGCCCCGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWLCWV*GGPGAW
Trigger: CCATGCGCCGGGGCCTCCTCAGACCCAGCACAGCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGCTGTGCTGGGTCTaGGGAGGCCCCGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWLCWV*GGPGAW
Trigger: CCATGCGCCGGGGCCTCCTCAGACCCAGCACAGCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPESQP*AGHADP
Trigger: AGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTACCCTCCCAGCCTaGAAGTCAGCCATGAGCCGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVTLPA*KSAMSR
Trigger: CCGGCTCATGGCTGACTTTCAGGCTGGGAGGGTAAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACAGGTCTTCGGCAGTaGGGCGGCGGCGCACGTAGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTGLRQ*GGGARS
Trigger: ACTACGTGCGCCGCCGCCTCACTGCCGAAGACCTGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACAGGTCTTCGGCAGTaGGGCGGCGGCGCACGTAGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTGLRQ*GGGARS
Trigger: ACTACGTGCGCCGCCGCCTCACTGCCGAAGACCTGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCGTCCATGACTTaGGAGCGTACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASSMT*ERTSSS
Trigger: GGAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAALAH*GLGGCL
Trigger: AAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCGGCGGCCATAGCCTaGGGAAGAGTAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAAAIA*GRVGGR
Trigger: TCTTCCTCCTACTCTTCCTCAGGCTATGGCCGCCGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCACTGATGTGCCTCTaGGCCTCTGCCCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSLMCL*ASALQC
Trigger: GCACTGGAGGGCAGAGGCTCAGAGGCACATCAGTGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCACTGATGTGCCTCTaGGCCTCTGCCCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSLMCL*ASALQC
Trigger: GCACTGGAGGGCAGAGGCTCAGAGGCACATCAGTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTCACTCCGTCCTGTaGACCAGGCACGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPHSVL*TRHAGH
Trigger: ATGCCCCGCGTGCCTGGTGCACAGGACGGAGTGAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTCACTCCGTCCTGTaGACCAGGCACGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPHSVL*TRHAGH
Trigger: ATGCCCCGCGTGCCTGGTGCACAGGACGGAGTGAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTACCAGGCGCTCATaGAGACGATACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMATRRS*RRYTLR
Trigger: CCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGGGGCACCCACTCCTaGCTTCAGCCGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRGTHS*LQPEVV
Trigger: TACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCGCCACAAACCCGTaGAAGCTCTCCAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAATNP*KLSRDR
Trigger: CCGGTCCCTGGAGAGCTTGCACGGGTTTGTGGCGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGGGTGGGCAGGGTTaGGTGGCTTCAACTGCACAA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPGGQG*VASTAQ
Trigger: TTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCGGGTGGGCAGGGTTaGGTGGCTTCAACTGCACAA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPGGQG*VASTAQ
Trigger: TTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCCGACTGAGGCTCTaGCACGCCAGAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSRLRL*HARRLF
Trigger: GAAGAGCCTTCTGGCGTGGCAGAGCCTCAGTCGGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGAATACTGGCTGCTGTaGCTCGGCCTGGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQEYWLL*LGLGPQ
Trigger: CTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCTGGCGGCCCAGCTaGTCGAGCTCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSWRPS*SSSRCR
Trigger: GCGGCAGCGTGAGCTCGAGCAGCTGGGCCGCCAGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCTGGCGGCCCAGCTaGTCGAGCTCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSWRPS*SSSRCR
Trigger: GCGGCAGCGTGAGCTCGAGCAGCTGGGCCGCCAGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTGGATCTGCTCTTaGCGCCTCTTGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAWICS*RLLASC
Trigger: GCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTGGATCTGCTCTTaGCGCCTCTTGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAWICS*RLLASC
Trigger: GCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCTCTGCCCGCTGTTaGTCAGCCAGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSARC*SASRSS
Trigger: GGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGTGCCTCAGCTAGCTaGCGCTGCTTCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCASAS*RCFSSA
Trigger: TGCGCTGGAGAAGCAGCGGCAGCTAGCTGAGGCACA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRATSS*MRRCSS
Trigger: AGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRATSS*MRRCSS
Trigger: AGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGTGCGTCCACTGCTaGCTCCTCGCGCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLCVHC*LLAPRH
Trigger: GTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTGTGCGTCCACTGCTaGCTCCTCGCGCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLCVHC*LLAPRH
Trigger: GTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTGTGCGTCCACTGCTaGCTCCTCGCGCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLCVHC*LLAPRH
Trigger: GTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATGCTGCGCTTCTGCTaGTGTGCGTCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDMLRFC*CASTAA
Trigger: GGCAGCAGTGGACGCACAGCAGCAGAAGCGCAGCAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTTGGCCTGGATCTCTaGCTCCGAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLGLDL*LRALPQ
Trigger: CTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTTGGCCTGGATCTCTaGCTCCGAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLGLDL*LRALPQ
Trigger: CTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCATCCGGCTGCGTTCTaGAGCCTCCACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQHPAAF*SLHLLG
Trigger: GCCCAGCAGGTGGAGGCTGCAGAACGCAGCCGGATG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSAPPR*RSVVSS
Trigger: GCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCGCTTCTGCGCTTCTaGCTCCTCAGCCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPLLRF*LLSPSA
Trigger: CGCGCTCGGGCTGAGGAGGCAGAAGCGCAGAAGCGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGQLCL*LPFALA
Trigger: AGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACGCAGGGCCAGCTCTaGCTCTGCCTGCCGTTTGCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTQGQL*LCLPFA
Trigger: CGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVSRAT*TWRARS
Trigger: AGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTCCGCACTGCGCTGTaGCGTCTCCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQFRTAL*RLQGHL
Trigger: CAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAPLPH*AVPSPG
Trigger: CCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCAGCTTGCTGCTGTaGCCGTCGCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLSLLL*PSLGLL
Trigger: GAGGAGGCCGAGCGACGGGCACAGCAGCAAGCTGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCTCAGCCTCAGCTTaGTGCTGTGCCCGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRSASA*CCARRS
Trigger: CGAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGCTCAGCCTCAGCTTaGTGCTGTGCCCGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRSASA*CCARRS
Trigger: CGAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCAGCCGCAGCCGCAGTaGTTCATTGGCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDQPQPQ*FIGLQL
Trigger: CAGCTGAAGGCCAATGAAGCACTGCGGCTGCGGCTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAGCCGCAGCCGCAGTaGTTCATTGGCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMQPQPQ*FIGLQL
Trigger: CAGCTGAAGGCCAATGAAGCACTGCGGCTGCGGCTG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCACCTCTTCTGCCTaGAGCCGCAGCCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWATSSA*SRSRSA
Trigger: AGCACTGCGGCTGCGGCTGCAGGCAGAAGAGGTGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCTTCTCCAGCTCCTaGTCCGCCAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCFSSS*SASSRC
Trigger: GCAGCGGGAGCTGGCGGAGCAGGAGCTGGAGAAGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCCAGGCGCTGCTGTaGGGTGCCCTCCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSQALL*GALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCCAGGCGCTGCTGTaGGGTGCCCTCCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSQALL*GALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCCAGGCGCTGCTGTaGGGTGCCCTCCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSQALL*GALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRRISS*SAARRC
Trigger: GCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCTGCTGCTCACCTTaGTCTGTCTCGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRCCSP*SVSARR
Trigger: CCTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCAGCAGCTGCCGCTaGTGCTCACCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSSCR*CSPCSV
Trigger: GACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCTGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCGGCATCCTCCTCTaGCAACTGCCTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGGILL*QLPLPL
Trigger: AAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGTAAGCACCCGCTCTaGCTCGGCCCGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSKHPL*LGPLAG
Trigger: GCCCGCCAGCGGGCCGAGGCAGAGCGGGTGCTTACT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGTAAGCACCCGCTCTaGCTCGGCCCGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSKHPL*LGPLAG
Trigger: GCCCGCCAGCGGGCCGAGGCAGAGCGGGTGCTTACT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGAAGGCCTCGTCTTCTaGCAGGCGCCTCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQEGLVF*QAPQAL
Trigger: GAGCGCCTGAGGCGCCTGGCAGAAGACGAGGCCTTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALCSAA*SSRRRR
Trigger: GCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSMSAL*SAACSS
Trigger: GGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSMSAL*SAACSS
Trigger: GGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRSLMP*AAGPGA
Trigger: AGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATCTCCTCCTCCACCTaGCGCCGCTGTCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWISSST*RRCRRV
Trigger: CACCCTGCGACAGCGGCGGCAGGTGGAGGAGGAGAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCGCGTTGCTGCGAATaGGCCCCAGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPRCCE*APAPAP
Trigger: TGGAGCTGGAGCTGGGGCGCATTCGCAGCAACGCGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTGTGTCCTCCGCGTTaGTGCGAATGCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLCPPR*CECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVPPAP*CALCPP
Trigger: CGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVPPAP*CALCPP
Trigger: CGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCCAGTTCCGCCTaGTCCTTGCTGCGCATTGTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASSSA*SLLRIV
Trigger: CACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTCCAGTTCCGCCTaGTCCTTGCTGCGCATTGTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASSSA*SLLRIV
Trigger: CACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTCTGCTCCTCCTCTaGCGCCAACTGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPLLLL*RQLPLP
Trigger: CGGCAGCGGCAGTTGGCGGCAGAGGAGGAGCAGAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCTCCCGGCGCCTCTaGTCCTCCTCTGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASRRL*SSSAAN
Trigger: GTTGGCGGCAGAGGAGGAGCAGAGGCGCCGGGAGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTCCCGGCGCCTCTaGTCCTCCTCTGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASRRL*SSSAAN
Trigger: GTTGGCGGCAGAGGAGGAGCAGAGGCGCCGGGAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTGCCAGGCTCCTCTaGACGCGCTCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAARLL*TRSSAS
Trigger: GGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTGCCAGGCTCCTCTaGACGCGCTCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAARLL*TRSSAS
Trigger: GGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGTGCCACCTTGCGCTaGCGAGCGGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSATLR*RAASSS
Trigger: GGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGTGCCACCTTGCGCTaGCGAGCGGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSATLR*RAASSS
Trigger: GGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPAPLP*AASLRP
Trigger: CGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPAPLP*AASLRP
Trigger: CGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCATCTCCGCGTCGGCTaGCTGCTTCTGTTTCAGCGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDHLRVG*LLLFQR
Trigger: GCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCATCTCCGCGTCGGCTaGCTGCTTCTGTTTCAGCGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMHLRVG*LLLFQR
Trigger: GCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCTGCCAGGGCCCGCTaGTGCGCCAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSARAR*CARSSS
Trigger: GGAGGAGGACCTGGCGCAGCAGCGGGCCCTGGCAGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTGCCAGGGCCCGCTaGTGCGCCAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSARAR*CARSSS
Trigger: GGAGGAGGACCTGGCGCAGCAGCGGGCCCTGGCAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTGCCAGGGCCCGCTaGTGCGCCAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSARAR*CARSSS
Trigger: GGAGGAGGACCTGGCGCAGCAGCGGGCCCTGGCAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASSFC*CSSSAS
Trigger: CGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASSFC*CSSSAS
Trigger: CGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGGCAAGCTCCTTCTaGTGCTGCAGCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWASSF*CCSSSA
Trigger: GGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGGCAAGCTCCTTCTaGTGCTGCAGCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWASSF*CCSSSA
Trigger: GGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATCTCCAGCTGCCGCTaGCGCTCGGCCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWISSCR*RSASRV
Trigger: GACTCTGGAGGCCGAGCGGCAGCGGCAGCTGGAGAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVALISS*RCRSAS
Trigger: GGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKALISS*RCRSAS
Trigger: GGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSALISS*RCRSAS
Trigger: GGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSLAFS*SMKRSR
Trigger: GCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSLAFS*SMKRSR
Trigger: GCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTGTTCCATCTGCTaGTGCTGCCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSCSIC*CCRCCS
Trigger: GGAGCAGCAGCGGCAGCAGCAGCAGATGGAACAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCTGGCCTCCTCCATaGTGGCCATCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSWPPP*WPSAPA
Trigger: AGCAGGAGCTGATGGCCAGCATGGAGGAGGCCAGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTGGCCTCCTCCATaGTGGCCATCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSWPPP*WPSAPA
Trigger: AGCAGGAGCTGATGGCCAGCATGGAGGAGGCCAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCTCAGCCTCGCGCTaGCGCCTCCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSASR*RLLASS
Trigger: GGAGGAGGCCAGGAGGCGGCAGCGCGAGGCTGAGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCTCAGCCTCGCGCTaGCGCCTCCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSASR*RLLASS
Trigger: GGAGGAGGCCAGGAGGCGGCAGCGCGAGGCTGAGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCAGTTCCTCTTGCTTaGGCCTCACGCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAVPLA*ASRPPQ
Trigger: CTGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAGTTCCTCTTGCTTaGGCCTCACGCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAVPLA*ASRPPQ
Trigger: CTGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCTGCTGCCGCTGCTaGTCCAGATGCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCCCRC*SRCCSS
Trigger: GGAACTGCAGCATCTGGAGCAGCAGCGGCAGCAGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCCTGTGCCAAACGCTaGAGTTCCTCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPCAKR*SSSWLR
Trigger: CCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCCTGTGCCAAACGCTaGAGTTCCTCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPCAKR*SSSWLR
Trigger: CCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCCGTGCGGAACTGCTaGAGCAGGTCCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPVRNC*SRSRRC
Trigger: ACAGCGACGGGACCTGCTGCAGCAGTTCCGCACGGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCCGTGCGGAACTGCTaGAGCAGGTCCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPVRNC*SRSRRC
Trigger: ACAGCGACGGGACCTGCTGCAGCAGTTCCGCACGGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGCCCGTGCGGAACTaGTGCAGCAGGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWPVRN*CSRSRR
Trigger: GCGACGGGACCTGCTGCAGCAGTTCCGCACGGGCCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACTGTCCAGCAGCTCTaGGGCGGGCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATVQQL*GGHEGT
Trigger: CGTGCCCTCGTGCCCGCCGCAGAGCTGCTGGACAGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDKDSLS*RRVSTS
Trigger: GGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGGCCAGGCAGCCGCTaGCCTGCAGCAGAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRPGSR*PAAESA
Trigger: TGCGGACTCTGCTGCAGGGCAGCGGCTGCCTGGCCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGGCCAGGCAGCCGCTaGCCTGCAGCAGAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRPGSR*PAAESA
Trigger: TGCGGACTCTGCTGCAGGGCAGCGGCTGCCTGGCCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCGGAAGGTCAGCTTaGGGGCATCAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRGRSA*GHQRAA
Trigger: TGCTGCTCTCTGATGCCCGCAAGCTGACCTTCCGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCGGAAGGTCAGCTTaGGGGCATCAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRGRSA*GHQRAA
Trigger: TGCTGCTCTCTGATGCCCGCAAGCTGACCTTCCGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGACATAGCCGGTGGCTaGCTGTGCTTCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMDIAGG*LCFQEL
Trigger: GAGCTCCTGGAAGCACAGGCAGCCACCGGCTATGTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCACCGGTCAGGTACTaGACCTCCAGGAAACGCTGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPPVRY*TSRKRW
Trigger: CCAGCGTTTCCTGGAGGTGCAGTACCTGACCGGTGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCACCGGTCAGGTACTaGACCTCCAGGAAACGCTGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPPVRY*TSRKRW
Trigger: CCAGCGTTTCCTGGAGGTGCAGTACCTGACCGGTGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCCCTCCTCCACCATaGTACGGTCCAGAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCPPPP*YGPERP
Trigger: AGGACGCTCTGGACCGTAGCATGGTGGAGGAGGGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCCCTCCTCCACCATaGTACGGTCCAGAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCPPPP*YGPERP
Trigger: AGGACGCTCTGGACCGTAGCATGGTGGAGGAGGGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCCTTGCTGGACTGTaGCGCAGCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWALAGL*RSLQQP
Trigger: AGGCTGCTGGAGGCTGCGGCACAGTCCAGCAAGGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTGTAGTAGCCCTTaGTGGACTGTGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGCSSP*WTVPQP
Trigger: AGGCTGCGGCACAGTCCAGCAAGGGCTACTACAGCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCTGTAGTAGCCCTTaGTGGACTGTGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGCSSP*WTVPQP
Trigger: AGGCTGCGGCACAGTCCAGCAAGGGCTACTACAGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACAGTGGCATCAAAGCTaGCACGCCGGGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAQWHQS*HAGSRP
Trigger: GGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCCGAGGGTCAGCTTaGGGTTGCCGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGRGSA*GCRQQC
Trigger: ACATTGCTGACGGCAACCCCAAGCTGACCCTCGGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGTAGGGCGTCCGCCTaGTTCAGCTGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSRASA*FSCSSH
Trigger: GTGTGAGGAGCAGCTGAACCAGGCGGACGCCCTACT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAGSAV*SPLALG
Trigger: GCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAGSAV*SPLALG
Trigger: GCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTGGGCCTCCACACTaGGCAAGTCCACGCCCCACT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAGPPH*ASPRPT
Trigger: AGTGGGGCGTGGACTTGCCCAGTGTGGAGGCCCAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTGGGCCTCCACACTaGGCAAGTCCACGCCCCACT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAGPPH*ASPRPT
Trigger: AGTGGGGCGTGGACTTGCCCAGTGTGGAGGCCCAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTGGGP*RSSAAL
Trigger: CAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTGGGCCGGGCAGGATaGTCTTCCCGCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVGRAG*SSRSSL
Trigger: CAGGCTGCTGCGGGAAGACCATCCTGCCCGGCCCAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCAGGACCCACCAGCTaGCATTGGTCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAGPTS*HWSPLC
Trigger: GCACAAGGGTGACCAATGCCAGCTGGTGGGTCCTGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTGGGCCTCCTGGTTaGGCGGCGGCACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPGPPG*AAAQES
Trigger: GCTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTAGCGACAGCTTCCTaGGCCTCCTGGTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLATAS*ASWLGG
Trigger: GCCGCCCAACCAGGAGGCCCAGGAAGCTGTCGCTAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCSAMR*AHSRAG
Trigger: CCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCSAMR*AHSRAG
Trigger: CCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVAGTA*ASFSCS
Trigger: GGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCAAGCTCTTGGAGAGTaGCAGGCACAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDQALGE*QAQPGP
Trigger: AGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAAGCTCTTGGAGAGTaGCAGGCACAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMQALGE*QAQPGP
Trigger: AGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCTGTGCCTCGGCCTaGGCCCGCAGCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCCASA*ARSFFS
Trigger: ACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCTGTGCCTCGGCCTaGGCCCGCAGCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCCASA*ARSFFS
Trigger: ACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQALAAS*HPAARR
Trigger: GCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWALAAS*HPAARR
Trigger: GCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTATTGGCACGGCCTaGATCTGCTCTTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAIGTA*ICSCRL
Trigger: GAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTATTGGCACGGCCTaGATCTGCTCTTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAIGTA*ICSCRL
Trigger: GAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTGCGTGGCTGCGGTaGCCTCGTGCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASAWLR*PRAVAG
Trigger: CCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSASSS*RFCVAA
Trigger: CGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTGCCTCGGCCCGCTaGCGGGCGGCATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSASAR*RAASSS
Trigger: AGAGGAGGATGCCGCCCGCCAGCGGGCCGAGGCAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCTGCCTCGGCCCGCTaGCGGGCGGCATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSASAR*RAASSS
Trigger: AGAGGAGGATGCCGCCCGCCAGCGGGCCGAGGCAGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTGCCTCGGCCCGCTaGCGGGCGGCATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSASAR*RAASSS
Trigger: AGAGGAGGATGCCGCCCGCCAGCGGGCCGAGGCAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCAGACGCCGCCGCTaGAAGGCCTCGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSRRRR*KASSSA
Trigger: GGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCAGACGCCGCCGCTaGAAGGCCTCGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSRRRR*KASSSA
Trigger: GGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCTGCAGCCGTTTCTaGGCGGCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSACSRF*AASWAS
Trigger: GCTGGCCCAGGAGGCCGCCCAGAAACGGCTGCAGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTGCAGCCGTTTCTaGGCGGCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKACSRF*AASWAS
Trigger: GCTGGCCCAGGAGGCCGCCCAGAAACGGCTGCAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCTCCTGCTCTACCTaGGCCTTCTGCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSCST*AFCRSV
Trigger: GACACTCCGGCAGAAGGCCCAGGTAGAGCAGGAGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASRAAS*AATLNR
Trigger: ACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCCGGGCCTGCTCCTaGGCAAGCTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARRACS*ASSFCC
Trigger: GCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCTTCCGGAAGCGCTaGGCGTCCTCCTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCFRKR*ASSSAR
Trigger: CCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAAGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCTTCCGGAAGCGCTaGGCGTCCTCCTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCFRKR*ASSSAR
Trigger: CCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAAGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCTTCCGGAAGCGCTaGGCGTCCTCCTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCFRKR*ASSSAR
Trigger: CCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAAGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRRSAS*SLCCRW
Trigger: CCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRRSAS*SLCCRW
Trigger: CCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTCCAGCTCCGCAATaGCCTCCCTCAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAPAPQ*PPSDAR
Trigger: CCGAGCGTCTGAGGGAGGCCATTGCGGAGCTGGAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCGCTGCCGCCTCCTaGCCTCCTCCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRAAAS*PPPCWP
Trigger: TGGCCAGCATGGAGGAGGCCAGGAGGCGGCAGCGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGCTCTCGCAGCCGCTaGTTTTCCTCCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRSRSR*FSSARS
Trigger: GCTCCTGGCGGAGGAAAACCAGCGGCTGCGAGAGCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCTCTCGCAGCCGCTaGTTTTCCTCCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRSRSR*FSSARS
Trigger: GCTCCTGGCGGAGGAAAACCAGCGGCTGCGAGAGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWKRPG*WRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWKRPG*WRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGGCAGTGCCTTCGTaGAAGCGGCCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWAVPS*KRPGWW
Trigger: CCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCTGCAGTTCCTCCTaGCTCAGGATGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRCSSS*LRMPAS
Trigger: GGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCTGCAGTTCCTCCTaGCTCAGGATGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRCSSS*LRMPAS
Trigger: GGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCCTTATCTGTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSLICE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCACAGATAAGGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCCTTATCTGTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSLICE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCACAGATAAGGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCCCAGTGCCAGCCTaGGCCTCCAGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCPVPA*ASSKAT
Trigger: TGTGGCCTTGCTGGAGGCCCAGGCTGGCACTGGGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCCCAGTGCCAGCCTaGGCCTCCAGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCPVPA*ASSKAT
Trigger: TGTGGCCTTGCTGGAGGCCCAGGCTGGCACTGGGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGTCCACAGTCAGCCTaGCGCTGGTGGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRPQSA*RWWQGR
Trigger: TCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGTCCACAGTCAGCCTaGCGCTGGTGGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRPQSA*RWWQGR
Trigger: TCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGGCTCCTGGGTGCTaGGGTCATGGTAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLAPGC*GHGRLW
Trigger: CCAGAGTCTACCATGACCCCAGCACCCAGGAGCCAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGTCCAGGAGCTCACTaGCCGGCACAGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARPGAH*PAQGHG
Trigger: TCCGTGCCCCTGTGCCGGCCAGTGAGCTCCTGGACG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCACAGGCAGGCGGTaGCTGTGCACCGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSTGRR*LCTGSM
Trigger: CATCGACCCGGTGCACAGCCACCGCCTGCCTGTGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCACAGGCAGGCGGTaGCTGTGCACCGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSTGRR*LCTGSM
Trigger: CATCGACCCGGTGCACAGCCACCGCCTGCCTGTGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCTGCCCCTTTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLCPFE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCAAAGGGGCAGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTCTGCCCCTTTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLCPFE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCAAAGGGGCAGAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATGGAGGAGCCACCGTaGCTGCCACCACCCGGGATG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQMEEPP*LPPPGM
Trigger: CATCCCGGGTGGTGGCAGCCACGGTGGCTCCTCCAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGGAGGAGCCACCGTaGCTGCCACCACCCGGGATG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMEEPP*LPPPGM
Trigger: CATCCCGGGTGGTGGCAGCCACGGTGGCTCCTCCAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCGCTCCCCCTTCACTaGGTCCAGCAGGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPLPLH*VQQEAR
Trigger: ACGGGCTTCCTGCTGGACCCAGTGAAGGGGGAGCGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCGCTCCCCCTTCACTaGGTCCAGCAGGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPLPLH*VQQEAR
Trigger: ACGGGCTTCCTGCTGGACCCAGTGAAGGGGGAGCGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCCTTGCCCGTCTCTaGGTCCACAATCACCACGCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLLARL*VHNHHA
Trigger: CGCGTGGTGATTGTGGACCCAGAGACGGGCAAGGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCCTTGCCCGTCTCTaGGTCCACAATCACCACGCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLLARL*VHNHHA
Trigger: CGCGTGGTGATTGTGGACCCAGAGACGGGCAAGGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSMSY*RPERRS
Trigger: CGACCGCCGCTCTGGTCGCCAGTATGACATCGACGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTCGCCGGTCCTTCTTaGCAACCATCACCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVAGPS*QPSPPH
Trigger: GTGAGGGGGTGATGGTTGCCAAGAAGGACCGGCGAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCGCCGGTCCTTCTTaGCAACCATCACCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVAGPS*QPSPPH
Trigger: GTGAGGGGGTGATGGTTGCCAAGAAGGACCGGCGAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCAGGGTCCTCAGCTaGCAGAGGCCCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGRVLS*QRPPLW
Trigger: CCAAAGAGGGGGCCTCTGCCAGCTGAGGACCCTGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGCAGGCTCCGGACCTaGTCTGGCCAGGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGRLRT*SGQGPH
Trigger: GTGGGGACCCTGGCCAGACCAGGTCCGGAGCCTGCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTTCCAGCAGGGAGATaGGGTTGTGGCCATCACGGA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLPAGR*GCGHHG
Trigger: TCCGTGATGGCCACAACCTCATCTCCCTGCTGGAAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACTTCCCCAGCTCGCTaGGCCACCTTGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATSPAR*ATLPEA
Trigger: GGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCGCTTGGCCAGGCCTaGGAGGTGCCCCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPLGQA*EVPLVL
Trigger: GAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCACGGGTTCAAGCTaGGCCTTGTACGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDATGSS*ALYVIS
Trigger: GCTGATCACGTACAAGGCTCAGCTTGAACCCGTGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGTTCAGCTTCCTCCTaGGCCTGCCGCTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRSASS*ACRFCA
Trigger: AGCGCAGAAGCGGCAGGCTCAGGAGGAAGCTGAACG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGTTCAGCTTCCTCCTaGGCCTGCCGCTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRSASS*ACRFCA
Trigger: AGCGCAGAAGCGGCAGGCTCAGGAGGAAGCTGAACG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCGTGTGGCCTCACTaGTGGCAGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAVWPH*WQPASQ
Trigger: CTGAGAAGCTGGCTGCCATCAGTGAGGCCACACGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCGTGTGGCCTCACTaGTGGCAGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAVWPH*WQPASQ
Trigger: CTGAGAAGCTGGCTGCCATCAGTGAGGCCACACGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCCAGCTCGCTCTCTaGTGCCTTGCGCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALQLAL*CLAQLG
Trigger: GCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTTCAATGCGAGCCTTaGGCTTGCCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLQCEP*ACPAPP
Trigger: TGGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPSPAR*SARAAA
Trigger: TGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTTCACAGCCTCATTaGCTGTCAGCCGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPSQPH*LSAADS
Trigger: GGAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTTCACAGCCTCATTaGCTGTCAGCCGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPSQPH*LSAADS
Trigger: GGAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGCAGCCTTATCTGTaGGTGGCAGGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWQPYL*VAGGAG
Trigger: GCCTGCGCCTCCTGCCACTCACAGATAAGGCTGCCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGCAGCCTTATCTGTaGGTGGCAGGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWQPYL*VAGGAG
Trigger: GCCTGCGCCTCCTGCCACTCACAGATAAGGCTGCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGAGCTGGCTGTAGGTaGCTGGCTCCTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGAGCR*LAPGCW
Trigger: CCAGCACCCAGGAGCCAGTCACCTACAGCCAGCTCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGCTGTGCTGGGTCTaGGGAGGCCCCGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWLCWV*GGPGAW
Trigger: CCATGCGCCGGGGCCTCCTCAGACCCAGCACAGCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCACTACGCCCGCCTTaGCAGCCTCATGGACATACA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPLRPP*QPHGHT
Trigger: TGTATGTCCATGAGGCTGTCAAGGCGGGCGTAGTGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACAGGTCTTCGGCAGTaGGGCGGCGGCGCACGTAGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATGLRQ*GGGARS
Trigger: ACTACGTGCGCCGCCGCCTCACTGCCGAAGACCTGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCAGCTCCTCCACAGTaGTCTGCTTGCGGAGACCGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPAPPQ*SACGDR
Trigger: GCGGTCTCCGCAAGCAGATCACTGTGGAGGAGCTGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGCTCCTCCACAGTaGTCTGCTTGCGGAGACCGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPAPPQ*SACGDR
Trigger: GCGGTCTCCGCAAGCAGATCACTGTGGAGGAGCTGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGTGGCCTCGTCCATaGCTTGAGAGCGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLWPRP*LESVPA
Trigger: AGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTGTGGCCTCGTCCATaGCTTGAGAGCGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLWPRP*LESVPA
Trigger: AGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCGTCTGGGGGTCAGTaGTGCAGCGCTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPSGGQ*CSAPSA
Trigger: AGCTGATGGAGCGCTGCATCACTGACCCCCAGACGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCGTCTGGGGGTCAGTaGTGCAGCGCTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPSGGQ*CSAPSA
Trigger: AGCTGATGGAGCGCTGCATCACTGACCCCCAGACGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTSGGQ*DPCGRP
Trigger: AGGCCTACCGCAAGGGTCTCATTGACCACCAGACGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCACCGGCATTGCCTaGGAGCATGTCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDATGIA*EHVSKL
Trigger: GAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCACCGGCATTGCCTaGGAGCATGTCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMATGIA*EHVSKL
Trigger: GAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCAGTGCTGGGGTCAATaGTGCCCCCGGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQQCWGQ*CPRCRL
Trigger: AAGCCTGCACCGGGGGCATCATTGACCCCAGCACTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAGTGCTGGGGTCAATaGTGCCCCCGGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQCWGQ*CPRCRL
Trigger: AAGCCTGCACCGGGGGCATCATTGACCCCAGCACTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCCAGGTCCCGCTCTaGCACCGAGAATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSQVPL*HRECLV
Trigger: GACCAGGCATTCTCGGTGGCAGAGCGGGACCTGGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCTCCCGGTACTCCTaGCAACGAAGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSRYS*QRSCSS
Trigger: TGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCTCCCGGTACTCCTaGCAACGAAGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSRYS*QRSCSS
Trigger: TGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCTGGAGGGGAACTTaGGCTCCTCAAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSWRGT*APQKQR
Trigger: CCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGGCCCGCTTGTACTaGCCCCTCCAAAGACTGGTA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLARLY*PLQRLV
Trigger: TACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTGGCCCGCTTGTACTaGCCCCTCCAAAGACTGGTA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLARLY*PLQRLV
Trigger: TACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCGCCTGGTTCAGCTaGTCCTCACACAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSAWFS*SSHSPA
Trigger: GGCTGGGCTGTGTGAGGAGCAGCTGAACCAGGCGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCGCCTGGTTCAGCTaGTCCTCACACAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSAWFS*SSHSPA
Trigger: GGCTGGGCTGTGTGAGGAGCAGCTGAACCAGGCGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGGCTQ*GWLPGA
Trigger: AGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCCTCTGTGTACTCTaGAGGGTCACCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRLCVL*RVTWVT
Trigger: TGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCCTCTGTGTACTCTaGAGGGTCACCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRLCVL*RVTWVT
Trigger: TGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCGCCACAAACCCGTaGAAGCTCTCCAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAATNP*KLSRDR
Trigger: CCGGTCCCTGGAGAGCTTGCACGGGTTTGTGGCGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCAGCTCCACTGTGTCTaGAAGGCAGCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDQLHCV*KAAWKD
Trigger: GTCCTTCCAGGCTGCCTTGCAGACACAGTGGAGCTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCATCCTGGGCATCCTaGAGCAGATCCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSWAS*SRSSSL
Trigger: CAGGCTCGAGGATCTGCTGCAGGATGCCCAGGATGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCATCCTGGGCATCCTaGAGCAGATCCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSWAS*SRSSSL
Trigger: CAGGCTCGAGGATCTGCTGCAGGATGCCCAGGATGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCACAGGCCTCCAGCTaGAGCCGGATATCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSQASS*SRISLS
Trigger: GCTCAAGGATATCCGGCTGCAGCTGGAGGCCTGTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGSRRR*TVRVSQ
Trigger: CTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGSRRR*TVRVSQ
Trigger: CTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSVAQR*AGRTPV
Trigger: CACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSVAQR*AGRTPV
Trigger: CACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTGCGCTTTCTGTTaGTCAGCGATGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWACAFC*SAMRWA
Trigger: CGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCTGCGCTTTCTGTTaGTCAGCGATGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQACAFC*SAMRWA
Trigger: CGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGAATACTGGCTGCTGTaGCTCGGCCTGGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAEYWLL*LGLGPQ
Trigger: CTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCACCAACCTCCTGTaGCCCCCGCAACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLTNLL*PPQLIS
Trigger: AGAGATGAGTTGCGGGGGGCACAGGAGGTTGGTGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCTGGCGGCCCAGCTaGTCGAGCTCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSWRPS*SSSRCR
Trigger: GCGGCAGCGTGAGCTCGAGCAGCTGGGCCGCCAGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCACGGCCTGGATCTaGTCTTGCCGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGTAWI*SCRLLA
Trigger: TGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCTCTGCCCGCTGTTaGTCAGCCAGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSARC*SASRSS
Trigger: GGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSASCR*FSSAAS
Trigger: GGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSASCR*FSSAAS
Trigger: GGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARATSS*MRRCSS
Trigger: AGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTGTGCGTCCACTGCTaGCTCCTCGCGCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLCVHC*LLAPRH
Trigger: GTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCGCTTCTGCTGCTGTaGGTCCACTGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQALLLL*VHCCLL
Trigger: GAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGATGCTGCGCTTCTaGTGCTGTGCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWMLRF*CCASTA
Trigger: AGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTCCTCTTGGATGCTaGGCTTCTGCTGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAPLGC*ASAAVR
Trigger: ACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASAPPR*RSVVSS
Trigger: GCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCGCTTCTGCGCTTCTaGCTCCTCAGCCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPLLRF*LLSPSA
Trigger: CGCGCTCGGGCTGAGGAGGCAGAAGCGCAGAAGCGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGQLCL*LPFALA
Trigger: AGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACGCAGGGCCAGCTCTaGCTCTGCCTGCCGTTTGCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATQGQL*LCLPFA
Trigger: CGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCGGCCTCCTCGGCCTaGAGTCTCAGCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSASSA*SLSSSR
Trigger: CCTGGATGAGCTGAGACTGCAGGCCGAGGAGGCCGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVSRAT*TWRARS
Trigger: AGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAPLPH*AVPSPG
Trigger: CCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGGCCACTGTTACATaGTCCTCCTGCAGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWATVT*SSCRVR
Trigger: GCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGGCCACTGTTACATaGTCCTCCTGCAGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWATVT*SSCRVR
Trigger: GCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCAGCTTGCTGCTGTaGCCGTCGCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALSLLL*PSLGLL
Trigger: GAGGAGGCCGAGCGACGGGCACAGCAGCAAGCTGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCTCAGCCTCAGCTTaGTGCTGTGCCCGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARSASA*CCARRS
Trigger: CGAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCATTGGCCTTCAGCTaGCAGCGCTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSLAFS*QRSSSR
Trigger: GCGGGAGCTGGAGCGCTGGCAGCTGAAGGCCAATGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCACCTCTTCTGCCTaGAGCCGCAGCCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAATSSA*SRSRSA
Trigger: AGCACTGCGGCTGCGGCTGCAGGCAGAAGAGGTGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGTGCCAGGCTCTTCTaGTGTGCCACCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCARLF*CATSSA
Trigger: GGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGTGCCAGGCTCTTCTaGTGTGCCACCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCARLF*CATSSA
Trigger: GGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLGIGL*QALLLC
Trigger: GCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCTTCTCCAGCTCCTaGTCCGCCAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACFSSS*SASSRC
Trigger: GCAGCGGGAGCTGGCGGAGCAGGAGCTGGAGAAGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCCAGGCGCTGCTGTaGGGTGCCCTCCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSQALL*GALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARRISS*SAARRC
Trigger: GCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCTGCTGCTCACCTTaGTCTGTCTCGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARCCSP*SVSARR
Trigger: CCTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSANCL*LLASSA
Trigger: GGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGTAAGCACCCGCTCTaGCTCGGCCCGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSKHPL*LGPLAG
Trigger: GCCCGCCAGCGGGCCGAGGCAGAGCGGGTGCTTACT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGAAGGCCTCGTCTTCTaGCAGGCGCCTCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAEGLVF*QAPQAL
Trigger: GAGCGCCTGAGGCGCCTGGCAGAAGACGAGGCCTTC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLCSAA*SSRRRR
Trigger: GCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLCSAA*SSRRRR
Trigger: GCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARSLMP*AAGPGA
Trigger: AGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATCTCCTCCTCCACCTaGCGCCGCTGTCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAISSST*RRCRRV
Trigger: CACCCTGCGACAGCGGCGGCAGGTGGAGGAGGAGAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGTCCTCCGCGTTGCTaGGAATGCGCCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCPPRC*ECAPAP
Trigger: TGGAGCTGGGGCGCATTCGCAGCAACGCGGAGGACA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGTCCTCCGCGTTGCTaGGAATGCGCCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCPPRC*ECAPAP
Trigger: TGGAGCTGGGGCGCATTCGCAGCAACGCGGAGGACA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTCTGCTCCTCCTCTaGCGCCAACTGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPLLLL*RQLPLP
Trigger: CGGCAGCGGCAGTTGGCGGCAGAGGAGGAGCAGAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTCCCGGCGCCTCTaGTCCTCCTCTGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASRRL*SSSAAN
Trigger: GTTGGCGGCAGAGGAGGAGCAGAGGCGCCGGGAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTGCCAGGCTCCTCTaGACGCGCTCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAARLL*TRSSAS
Trigger: GGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAFSSA*SRFWAA
Trigger: GGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAFSSA*SRFWAA
Trigger: GGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTTGCGCAGCTTCTCTaGGGCCGCCTGCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLAQLL*GRLRLS
Trigger: GCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTTGCGCAGCTTCTCTaGGGCCGCCTGCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLAQLL*GRLRLS
Trigger: GCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPAPLP*AASLRP
Trigger: CGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGACGCGCCGCCTCCTaGTCCGCTTCCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRRAAS*SASLRS
Trigger: GCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLLFQR*LLCLGP
Trigger: CGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLLFQR*LLCLGP
Trigger: CGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGTGTGGTCAGCTCCTaGTCTACCTGGGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSVVSS*STWAFC
Trigger: GCAGAAGGCCCAGGTAGAGCAGGAGCTGACCACACT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSTWLR*RAASVT
Trigger: GGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSTWLR*RAASVT
Trigger: GGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSFCC*SSSASA
Trigger: GGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATCTCCAGCTGCCGCTaGCGCTCGGCCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAISSCR*RSASRV
Trigger: GACTCTGGAGGCCGAGCGGCAGCGGCAGCTGGAGAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRALISS*RCRSAS
Trigger: GGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCGATCTCTTCAGCCTaGTTCCGGAAGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPISSA*FRKRWA
Trigger: CGCCCAGCGCTTCCGGAAGCAGGCTGAAGAGATCGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCATCGTGGTCACTCTaGTGTCGCTGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASWSL*CRWISS
Trigger: GCTGGAGATCCAGCGACAGCAGAGTGACCACGATGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATGAAGCGCTCGCGCTaGAGCAGGCTGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMMKRSR*SRLSFS
Trigger: TGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCATCTGCTGCTGCTaGCGCTGCTGCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSICCC*RCCSSR
Trigger: GCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGATGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCATCTGCTGCTGCTaGCGCTGCTGCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSICCC*RCCSSR
Trigger: GCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGATGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTCAGCCTCGCGCTaGCGCCTCCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSASR*RLLASS
Trigger: GGAGGAGGCCAGGAGGCGGCAGCGCGAGGCTGAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPPGSG*LLPVAA
Trigger: AGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTACACATCTTCCCGCTaGGTGAGCTCAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMYTSSR*VSSATV
Trigger: CACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCAGGAAGCCCGAGGCTaGCTGGGCCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQQEARG*LGLQQD
Trigger: ATCTTGCTGGAGGCCCAGGCAGCCTCGGGCTTCCTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAGGAAGCCCGAGGCTaGCTGGGCCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQEARG*LGLQQD
Trigger: ATCTTGCTGGAGGCCCAGGCAGCCTCGGGCTTCCTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCTGCCCTGGAACTTaGCAAACGGTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSCPGT*QTVQTR
Trigger: CCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGGCCCGTGCGGAACTaGTGCAGCAGGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKWPVRN*CSRSRR
Trigger: GCGACGGGACCTGCTGCAGCAGTTCCGCACGGGCCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGCCCGTGCGGAACTaGTGCAGCAGGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWPVRN*CSRSRR
Trigger: GCGACGGGACCTGCTGCAGCAGTTCCGCACGGGCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGCCCGTGCGGAACTaGTGCAGCAGGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWPVRN*CSRSRR
Trigger: GCGACGGGACCTGCTGCAGCAGTTCCGCACGGGCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACTGTCCAGCAGCTCTaGGGCGGGCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTVQQL*GGHEGT
Trigger: CGTGCCCTCGTGCCCGCCGCAGAGCTGCTGGACAGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACTGTCCAGCAGCTCTaGGGCGGGCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTVQQL*GGHEGT
Trigger: CGTGCCCTCGTGCCCGCCGCAGAGCTGCTGGACAGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCAGGGTCGATGATATaGCCAGTGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAGSMI*PVPAWA
Trigger: GGCCCAGGCTGGCACTGGGCATATCATCGACCCTGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCAGGGTCGATGATATaGCCAGTGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAGSMI*PVPAWA
Trigger: GGCCCAGGCTGGCACTGGGCATATCATCGACCCTGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCCGCAGCAACTCCTaGCGCTGCTCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCRSNS*RCSSVK
Trigger: CTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGGCAGCCGCTGCCCTaGAGCAGAGTCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRQPLP*SRVRTE
Trigger: CTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGGCAGCCGCTGCCCTaGAGCAGAGTCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRQPLP*SRVRTE
Trigger: CTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGGCAGCCGCTGCCCTaGAGCAGAGTCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRQPLP*SRVRTE
Trigger: CTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGGCCAGGCAGCCGCTaGCCTGCAGCAGAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRPGSR*PAAESA
Trigger: TGCGGACTCTGCTGCAGGGCAGCGGCTGCCTGGCCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTCCTGTGGCTAGCTaGGCATCCAGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPPVAS*ASSSLS
Trigger: GCTGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTCCACAGTGATCTaGTTGCGGAGACCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSTVI*LRRPRK
Trigger: CTTCCGCGGTCTCCGCAAGCAGATCACTGTGGAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCTCCACAGTGATCTaGTTGCGGAGACCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSTVI*LRRPRK
Trigger: CTTCCGCGGTCTCCGCAAGCAGATCACTGTGGAGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCGGTGGCTGCCTGTaGTTCCAGGAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAGGCL*FQELKG
Trigger: GCCTTTGAGCTCCTGGAAGCACAGGCAGCCACCGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCGGTGGCTGCCTGTaGTTCCAGGAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAGGCL*FQELKG
Trigger: GCCTTTGAGCTCCTGGAAGCACAGGCAGCCACCGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCACCACGCGGCGCTTaGGCACTGAGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSPRGA*ALRTWR
Trigger: CCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTCTGTGTCCAGGATaGCGGCCACGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSLCPG*RPRGQS
Trigger: AGACTGGCCCCGTGGCCGGCATCCTGGACACAGAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCGGGCATCCACAGTaGCACGTTGCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCGHPQ*HVAELR
Trigger: ACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCAGCTTCTGGGCTGTaGGGGCATCCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAASGL*GHPQCH
Trigger: GTGGCACTGTGGATGCCCGCACAGCCCAGAAGCTGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCCTTGCTGGACTGTaGCGCAGCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAALAGL*RSLQQP
Trigger: AGGCTGCTGGAGGCTGCGGCACAGTCCAGCAAGGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAGTGGCATCAAAGCTaGCACGCCGGGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQWHQS*HAGSRP
Trigger: GGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCAGTGGCATCAAAGCTaGCACGCCGGGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKQWHQS*HAGSRP
Trigger: GGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAGTGGCATCAAAGCTaGCACGCCGGGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQWHQS*HAGSRP
Trigger: GGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCTGCAGGGTCACCTaGGTCACAGGGGCACCCACT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLCRVT*VTGAPT
Trigger: AGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGGTGGCTGCCCAGCTaGGCCTCCACACTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRWLPS*ASTLGK
Trigger: CTTGCCCAGTGTGGAGGCCCAGCTGGGCAGCCACCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGGTGGCTGCCCAGCTaGGCCTCCACACTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRWLPS*ASTLGK
Trigger: CTTGCCCAGTGTGGAGGCCCAGCTGGGCAGCCACCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGTAGGCACCCCGGGTaGCAGGGGAGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGRHPG*QGRAGS
Trigger: AGAGCCAGCTCTCCCCTGCCACCCGGGGTGCCTACC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGTAGGCACCCCGGGTaGCAGGGGAGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGRHPG*QGRAGS
Trigger: AGAGCCAGCTCTCCCCTGCCACCCGGGGTGCCTACC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTGGGCCGGGCAGGATaGTCTTCCCGCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVGRAG*SSRSSL
Trigger: CAGGCTGCTGCGGGAAGACCATCCTGCCCGGCCCAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTGGGCCGGGCAGGATaGTCTTCCCGCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVGRAG*SSRSSL
Trigger: CAGGCTGCTGCGGGAAGACCATCCTGCCCGGCCCAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCCACCAGCTGGCATTaGTCACCCTTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPTSWH*SPLCTV
Trigger: GACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTCCAGTGGGATGGCTaGGCAGGACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWFQWDG*AGPTSW
Trigger: CCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCACCTTCCAGTGGGATaGCTGGGCAGGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWHLPVG*LGRTHQ
Trigger: CTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCACCTTCCAGTGGGATaGCTGGGCAGGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQHLPVG*LGRTHQ
Trigger: CTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGAGCACCTTCCAGTaGGATGGCTGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLSTFQ*DGWAGP
Trigger: GGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTGGGCCTCCTGGTTaGGCGGCGGCACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPGPPG*AAAQES
Trigger: GCTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTTCCTGGGCCTCCTaGTTGGGCGGCGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAASWAS*LGGGTR
Trigger: TCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGAAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTAGCGACAGCTTCCTaGGCCTCCTGGTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALATAS*ASWLGG
Trigger: GCCGCCCAACCAGGAGGCCCAGGAAGCTGTCGCTAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGVLIQ*QPQTVH
Trigger: GTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCSAMR*AHSRAG
Trigger: CCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTPSAE*VQQVTA
Trigger: AGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVAGTA*ASFSCS
Trigger: GGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCCGCACATCTGTCTaGGCTAGAACAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCRTSV*ARTACQ
Trigger: CTGGCAGGCTGTTCTAGCCCAGACAGATGTGCGGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAALAAS*HPAARR
Trigger: GCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCAGGGCCTTCTCCTaGCGCAGCTGTTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSRAFS*RSCSRA
Trigger: TGCGCGAGAACAGCTGCGCCAGGAGAAGGCCCTGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGGCCTTCTCCTaGCGCAGCTGTTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSRAFS*RSCSRA
Trigger: TGCGCGAGAACAGCTGCGCCAGGAGAAGGCCCTGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASSSA*ALAWAC
Trigger: ACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQASSSA*ALAWAC
Trigger: ACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCTGCAGCTCCTCTTaGATGCTGCGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCCSSS*MLRFCC
Trigger: GCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCTGCAGCTCCTCTTaGATGCTGCGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCCSSS*MLRFCC
Trigger: GCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTGCCGTTTGCGCTaGCTCTCATCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWACRLR*LSSCTC
Trigger: GCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCTGCCGTTTGCGCTaGCTCTCATCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQACRLR*LSSCTC
Trigger: GCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTGCGTGGCTGCGGTaGCCTCGTGCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSAWLR*PRAVAG
Trigger: CCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASASSS*RFCVAA
Trigger: CGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTGCCTCGGCCCGCTaGCGGGCGGCATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSASAR*RAASSS
Trigger: AGAGGAGGATGCCGCCCGCCAGCGGGCCGAGGCAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCAGACGCCGCCGCTaGAAGGCCTCGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASRRRR*KASSSA
Trigger: GGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGATGCCTTGCGCAGCTaGGCCAGGCGCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGADALRS*ARRSSM
Trigger: CATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTGCAGCCGTTTCTaGGCGGCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRACSRF*AASWAS
Trigger: GCTGGCCCAGGAGGCCGCCCAGAAACGGCTGCAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCTCCTCCTCTACCTaGCTGCGCTGCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSSST*LRCRAA
Trigger: GGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCTCCTCCTCTACCTaGCTGCGCTGCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSSST*LRCRAA
Trigger: GGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCTCCTCCTCTACCTaGCTGCGCTGCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSSST*LRCRAA
Trigger: GGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSRAAS*AATLNR
Trigger: ACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSRAAS*AATLNR
Trigger: ACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGCCGGGCCTGCTCCTaGGCAAGCTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRRACS*ASSFCC
Trigger: GCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCCGGGCCTGCTCCTaGGCAAGCTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRRACS*ASSFCC
Trigger: GCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGCCGGGCCTGCTCCTaGGCAAGCTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRRACS*ASSFCC
Trigger: GCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSLCCR*ISSVCT
Trigger: GGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSLCCR*ISSVCT
Trigger: GGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTCCAGCTCCGCAATaGCCTCCCTCAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAPAPQ*PPSDAR
Trigger: CCGAGCGTCTGAGGGAGGCCATTGCGGAGCTGGAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCTTCTGCAGGGCCTaGGTCTCCTGCAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLFCRA*VSCSIC
Trigger: GCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCTTCTGCAGGGCCTaGGTCTCCTGCAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLFCRA*VSCSIC
Trigger: GCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGCGCTGCCGCCTCCTaGCCTCCTCCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRAAAS*PPPCWP
Trigger: TGGCCAGCATGGAGGAGGCCAGGAGGCGGCAGCGCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGGCAGTGCCTTCGTaGAAGCGGCCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWAVPS*KRPGWW
Trigger: CCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVHPGR*AVPSWK
Trigger: CTTCCACGAAGGCACTGCCCAACGGCCGGGATGCAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCAGGCGGACGCCATaGTCCCTGACAATAAGGTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSRRTP*SLTIRS
Trigger: GGACCTTATTGTCAGGGACCATGGCGTCCGCCTGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCAGGCGGACGCCATaGTCCCTGACAATAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSRRTP*SLTIRS
Trigger: GGACCTTATTGTCAGGGACCATGGCGTCCGCCTGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCACGGTCCTGCCCTaGAACTTGCCAAACGGTGCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVTVLP*NLPNGA
Trigger: TGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTCACGGTCCTGCCCTaGAACTTGCCAAACGGTGCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVTVLP*NLPNGA
Trigger: TGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCCCAGTGCCAGCCTaGGCCTCCAGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACPVPA*ASSKAT
Trigger: TGTGGCCTTGCTGGAGGCCCAGGCTGGCACTGGGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGTCCACAGTCAGCCTaGCGCTGGTGGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARPQSA*RWWQGR
Trigger: TCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTGGCTGTAGGTGACTaGCTCCTGGGTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLAVGD*LLGAGV
Trigger: GACCCCAGCACCCAGGAGCCAGTCACCTACAGCCAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGGCTGTAGGTGACTaGCTCCTGGGTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLAVGD*LLGAGV
Trigger: GACCCCAGCACCCAGGAGCCAGTCACCTACAGCCAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTCAAGCCGGTCAGCTaGTCAGACCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLKPVS*SDRHRC
Trigger: ACAGCGGTGCCGGTCTGACCAGCTGACCGGCTTGAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCAAGCCGGTCAGCTaGTCAGACCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLKPVS*SDRHRC
Trigger: ACAGCGGTGCCGGTCTGACCAGCTGACCGGCTTGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGTCCAGGAGCTCACTaGCCGGCACAGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRPGAH*PAQGHG
Trigger: TCCGTGCCCCTGTGCCGGCCAGTGAGCTCCTGGACG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGTCCAGGAGCTCACTaGCCGGCACAGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRPGAH*PAQGHG
Trigger: TCCGTGCCCCTGTGCCGGCCAGTGAGCTCCTGGACG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGAGGCCCCGGCGCATaGCCTCATAGATGGTTACTT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGGPGA*PHRWLL
Trigger: AAGTAACCATCTATGAGGCCATGCGCCGGGGCCTCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGAGGCCCCGGCGCATaGCCTCATAGATGGTTACTT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGGPGA*PHRWLL
Trigger: AAGTAACCATCTATGAGGCCATGCGCCGGGGCCTCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCACAGGCAGGCGGTaGCTGTGCACCGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASTGRR*LCTGSM
Trigger: CATCGACCCGGTGCACAGCCACCGCCTGCCTGTGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCTGCCCCTTTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALCPFE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCAAAGGGGCAGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATGGAGGAGCCACCGTaGCTGCCACCACCCGGGATG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAMEEPP*LPPPGM
Trigger: CATCCCGGGTGGTGGCAGCCACGGTGGCTCCTCCAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGAGGCCAGGTTCTGCTaGCGGATGATCTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMEARFC*RMISVF
Trigger: GAAGACCGAGATCATCCGCCAGCAGAACCTGGCCTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGGCCAGGTTCTGCTaGCGGATGATCTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDEARFC*RMISVF
Trigger: GAAGACCGAGATCATCCGCCAGCAGAACCTGGCCTC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGTTAGCGTCTGCCTaGAGCCAGGCAGGTAGACAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWLASA*SQAGRH
Trigger: GTGTCTACCTGCCTGGCTCCAGGCAGACGCTAACCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTGGGCTCCGACAGCTaGTCGTGCGTGTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLGSDS*SCVSLL
Trigger: CAATAAGGACACGCACGACCAGCTGTCGGAGCCCAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCTGCGCACCTCGCTaGGCTCCGACAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASCAPR*APTAGR
Trigger: ACGACCAGCTGTCGGAGCCCAGCGAGGTGCGCAGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCAGCAGCATCTaGCCGCTGGGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSSSI*PLGSSR
Trigger: CCGTGATGACCCCAGCGGCCAGATGCTGCTGCTGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGCAGACGGATGCCATaGTCCTTCAGGATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSRRMP*SFRIRP
Trigger: GGGCCTGATCCTGAAGGACCATGGCATCCGTCTGCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGACACAGGCCCGTCTaGGGGTCAGTGATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRHRPV*GSVMQR
Trigger: GCGCTGCATCACTGACCCCCAGACGGGCCTGTGTCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGACACAGGCCCGTCTaGGGGTCAGTGATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRHRPV*GSVMQR
Trigger: GCGCTGCATCACTGACCCCCAGACGGGCCTGTGTCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGACCAGGAGGCTAGCTaGGTCCTGGGGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWDQEAS*VLGPAE
Trigger: TTCTGCTGGCCCCAGGACCCAGCTAGCCTCCTGGTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTCCAGCAGCCGCTaGCCGGTGATGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASSSR*PVMLST
Trigger: GGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCAGCTGACATCTTaGTCTTGGTGCGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGQLTS*SWCVGP
Trigger: AGGACCCACGCACCAAGACCAAGATGTCAGCTGCCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGGCAGCTGACATCTTaGTCTTGGTGCGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGQLTS*SWCVGP
Trigger: AGGACCCACGCACCAAGACCAAGATGTCAGCTGCCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACATCACGCAGCTTCTaGGCTGTGCGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTSRSF*AVRAST
Trigger: TGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGTAGTAGCCCTTGCTaGACTGTGCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCSSPC*TVPQPP
Trigger: TGGAGGCTGCGGCACAGTCCAGCAAGGGCTACTACA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGTAGTAGCCCTTGCTaGACTGTGCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCSSPC*TVPQPP
Trigger: TGGAGGCTGCGGCACAGTCCAGCAAGGGCTACTACA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGAAGCCAGAGCCAGTaGCATCAAAGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRSQSQ*HQSCHA
Trigger: GGCGTGGCAGCTTTGATGCCACTGGCTCTGGCTTCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTGACGCCGGGCACATaGGGATGCAGGCTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVTPGT*GCRLRG
Trigger: ACCCCGCAGCCTGCATCCCCATGTGCCCGGCGTCAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGGTCCCCACGGTGGTaGCAGACACCACAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGSPRW*QTPQGF
Trigger: AAACCCCTGTGGTGTCTGCCACCACCGTGGGGACCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCAGGGTCCCCACGGTaGTGGCAGACACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPGSPR*WQTPQG
Trigger: CCCCTGTGGTGTCTGCCACCACCGTGGGGACCCTGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCGTTCATCTGTGGCTaGGGCAGGCTCCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSFICG*GRLRTW
Trigger: CCAGGTCCGGAGCCTGCCCCAGCCACAGATGAACGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
3UTR CAA 72 bp GGTGGGCAGCAGCACCCAGAGAGGGGTTCCACAGGCTaGAAGAGTCCCTGGGCCTCTGGAGCAGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: GGQQHPERGSTG*KSPWASGAGEV
Trigger: GACTTCTCCTGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLYHTL*PQQQLL
Trigger: GAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCCAGGGGGAATCTTaGGCTGGCCCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSQGES*AGPLVL
Trigger: CAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACTTCCCCAGCTCGCTaGGCCACCTTGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTSPAR*ATLPEA
Trigger: GGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACTTCCCCAGCTCGCTaGGCCACCTTGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTSPAR*ATLPEA
Trigger: GGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACTTCCCCAGCTCGCTaGGCCACCTTGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTSPAR*ATLPEA
Trigger: GGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCCTCCCGAACATCTaGGAAGAACTGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRLPNI*EELEVG
Trigger: GCCTACTTCCAGTTCTTCTCAGATGTTCGGGAGGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCGCTTGGCCAGGCCTaGGAGGTGCCCCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPLGQA*EVPLVL
Trigger: GAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCGCTTGGCCAGGCCTaGGAGGTGCCCCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPLGQA*EVPLVL
Trigger: GAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRCWNH*APSSGM
Trigger: CATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRCWNH*APSSGM
Trigger: CATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGTGTGACCAGGGCCTaGTGCTGCGCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSVTRA*CCASSL
Trigger: TAGACTGGAGGCGCAGCATCAGGCCCTGGTCACACT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGTGTGACCAGGGCCTaGTGCTGCGCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSVTRA*CCASSL
Trigger: TAGACTGGAGGCGCAGCATCAGGCCCTGGTCACACT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTGGTGCCACAGTGTaGCCAGGGCCTGATGCTGCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAGATV*PGPDAA
Trigger: CGCAGCATCAGGCCCTGGTCACACTGTGGCACCAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTGGTGCCACAGTGTaGCCAGGGCCTGATGCTGCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAGATV*PGPDAA
Trigger: CGCAGCATCAGGCCCTGGTCACACTGTGGCACCAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCTCCGATCCAGACTaGACCTTGGGCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLSDPD*TLGFLA
Trigger: TGCCAAGAAGCCCAAGGTTCAGTCTGGATCGGAGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCGTGTGGCCTCACTaGTGGCAGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAVWPH*WQPASQ
Trigger: CTGAGAAGCTGGCTGCCATCAGTGAGGCCACACGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCCAGCTCGCTCTCTaGTGCCTTGCGCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLQLAL*CLAQLG
Trigger: GCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCCAGCTCGCTCTCTaGTGCCTTGCGCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLQLAL*CLAQLG
Trigger: GCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDMFCSC*SVCCSS
Trigger: GGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSARA*ARLISA
Trigger: GGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCATCTCCTCCGACTTaGGCTGCAGTAACTTCGCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASPPT*AAVTSP
Trigger: AGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPSPAR*SARAAA
Trigger: TGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTGGCGATCTCAGAGTaGGCCAAGGCAGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVAISE*AKAARC
Trigger: GCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTGGCGATCTCAGAGTaGGCCAAGGCAGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVAISE*AKAARC
Trigger: GCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTGGCGATCTCAGAGTaGGCCAAGGCAGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVAISE*AKAARC
Trigger: GCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCAGCCACCGTGGTGTaGCCCTGTGCCAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASATVV*PCAKRC
Trigger: GCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGACGGCACGCTCAGCTaGCAGCAGTTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWDGTLS*QQFVVQ
Trigger: CTGCACCACAAACTGCTGTCAGCTGAGCGTGCCGTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGACGGCACGCTCAGCTaGCAGCAGTTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQDGTLS*QQFVVQ
Trigger: CTGCACCACAAACTGCTGTCAGCTGAGCGTGCCGTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGTCCTTGTAGCCGGTaGCGGCACGCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGPCSR*RHAQLT
Trigger: TGTCAGCTGAGCGTGCCGTCACCGGCTACAAGGACC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGAGCTGGCTGTAGGTaGCTGGCTCCTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGAGCR*LAPGCW
Trigger: CCAGCACCCAGGAGCCAGTCACCTACAGCCAGCTCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGAGCTGGCTGTAGGTaGCTGGCTCCTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGAGCR*LAPGCW
Trigger: CCAGCACCCAGGAGCCAGTCACCTACAGCCAGCTCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGAGCTGGCTGTAGGTaGCTGGCTCCTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGAGCR*LAPGCW
Trigger: CCAGCACCCAGGAGCCAGTCACCTACAGCCAGCTCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCAAACTGAGCTCTGCTaGGGATCTTGGCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDQTELC*GSWRPG
Trigger: TCCTGGACGCCAAGATCCTCAGCAGAGCTCAGTTTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCCGGGATCATGTTTaGCTGCATCACCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLRDHV*LHHLPQ
Trigger: CTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPESQP*AGHADP
Trigger: AGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPESQP*AGHADP
Trigger: AGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGTTACCCTCCCAGCCTaGAAGTCAGCCATGAGCCGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWVTLPA*KSAMSR
Trigger: CCGGCTCATGGCTGACTTTCAGGCTGGGAGGGTAAC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTTACCCTCCCAGCCTaGAAGTCAGCCATGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVTLPA*KSAMSR
Trigger: CCGGCTCATGGCTGACTTTCAGGCTGGGAGGGTAAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACAGGTCTTCGGCAGTaGGGCGGCGGCGCACGTAGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTGLRQ*GGGARS
Trigger: ACTACGTGCGCCGCCGCCTCACTGCCGAAGACCTGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACAGGTCTTCGGCAGTaGGGCGGCGGCGCACGTAGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTGLRQ*GGGARS
Trigger: ACTACGTGCGCCGCCGCCTCACTGCCGAAGACCTGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACAGGTCTTCGGCAGTaGGGCGGCGGCGCACGTAGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTGLRQ*GGGARS
Trigger: ACTACGTGCGCCGCCGCCTCACTGCCGAAGACCTGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCAGCTCCTCCACAGTaGTCTGCTTGCGGAGACCGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPAPPQ*SACGDR
Trigger: GCGGTCTCCGCAAGCAGATCACTGTGGAGGAGCTGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTCGTCCATGACTTaGGAGCGTACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASSMT*ERTSSS
Trigger: GGAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCGTCTGGGGGTCAGTaGTGCAGCGCTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPSGGQ*CSAPSA
Trigger: AGCTGATGGAGCGCTGCATCACTGACCCCCAGACGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAALAH*GLGGCL
Trigger: AAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAALAH*GLGGCL
Trigger: AAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTTGACGACGCCATCTaGGGAGGAGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLDDAI*GGDGDL
Trigger: GAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTTGACGACGCCATCTaGGGAGGAGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLDDAI*GGDGDL
Trigger: GAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGTCTTGGGGCACGTaGGGTACTTGGAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWSWGT*GTWSKH
Trigger: GTGCTTACTCCAAGTACCTCACGTGCCCCAAGACCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGTCTTGGGGCACGTaGGGTACTTGGAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWSWGT*GTWSKH
Trigger: GTGCTTACTCCAAGTACCTCACGTGCCCCAAGACCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTTGTAGGAGATCTTaGGCTTGGTCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPCRRS*AWSWGT
Trigger: CGTGCCCCAAGACCAAGCTCAAGATCTCCTACAAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCGGCGGCCATAGCCTaGGGAAGAGTAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAAAIA*GRVGGR
Trigger: TCTTCCTCCTACTCTTCCTCAGGCTATGGCCGCCGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCGGCGGCCATAGCCTaGGGAAGAGTAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAAAIA*GRVGGR
Trigger: TCTTCCTCCTACTCTTCCTCAGGCTATGGCCGCCGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTCCCCGGGGCTGGGTaGGCCACTGCTTCCATTGGA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVPGAG*ATASIG
Trigger: TCCAATGGAAGCAGTGGCTCACCCAGCCCCGGGGAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000089610.10
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCAGGCGCACACTCCTaGTTACGTCCCGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAGAHS*LRPAPS
Trigger: CGAGGGAGCGGGACGTAATCAGGAGTGTGCGCCTGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089610.10
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCCAGGTCCCGCTCTaGCACCGAGAATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASQVPL*HRECLV
Trigger: GACCAGGCATTCTCGGTGGCAGAGCGGGACCTGGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTCACTCCGTCCTGTaGACCAGGCACGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPHSVL*TRHAGH
Trigger: ATGCCCCGCGTGCCTGGTGCACAGGACGGAGTGAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTCACTCCGTCCTGTaGACCAGGCACGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPHSVL*TRHAGH
Trigger: ATGCCCCGCGTGCCTGGTGCACAGGACGGAGTGAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCTCACTCCGTCCTGTaGACCAGGCACGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPHSVL*TRHAGH
Trigger: ATGCCCCGCGTGCCTGGTGCACAGGACGGAGTGAGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGTGCCGGATCCATTaGAGCAGCAGCAACACAAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWCRIH*SSSNTS
Trigger: GCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGTGCCGGATCCATTaGAGCAGCAGCAACACAAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWCRIH*SSSNTS
Trigger: GCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGCCACATGCAGCTTaGCCCACTCCTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWPHAA*PTPSPH
Trigger: ATGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGCCACATGCAGCTTaGCCCACTCCTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWPHAA*PTPSPH
Trigger: ATGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAACTCGCTTCGCAGTTaGTTCTCCCGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDNSLRS*FSRSRM
Trigger: CATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAACTCGCTTCGCAGTTaGTTCTCCCGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMNSLRS*FSRSRM
Trigger: CATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCGCCTGGTTCAGCTaGTCCTCACACAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASAWFS*SSHSPA
Trigger: GGCTGGGCTGTGTGAGGAGCAGCTGAACCAGGCGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTACCAGGCGCTCATaGAGACGATACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQATRRS*RRYTLR
Trigger: CCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTACCAGGCGCTCATaGAGACGATACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWATRRS*RRYTLR
Trigger: CCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCGCCACAAACCCGTaGAAGCTCTCCAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAATNP*KLSRDR
Trigger: CCGGTCCCTGGAGAGCTTGCACGGGTTTGTGGCGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVSCSF*NCSSAS
Trigger: GGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCAGGCCTGAGAGGTaGCCCTTGTACTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMARPER*PLYSFS
Trigger: ACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCGGGTGGGCAGGGTTaGGTGGCTTCAACTGCACAA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPGGQG*VASTAQ
Trigger: TTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCGGGTGGGCAGGGTTaGGTGGCTTCAACTGCACAA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPGGQG*VASTAQ
Trigger: TTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCATTGGTCACCCTTGTaGACAGTCACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMHWSPL*TVTSTC
Trigger: GCAGGTGGAGGTGACTGTGCACAAGGGTGACCAATG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCCGACTGAGGCTCTaGCACGCCAGAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSRLRL*HARRLF
Trigger: GAAGAGCCTTCTGGCGTGGCAGAGCCTCAGTCGGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGSRRR*TVRVSQ
Trigger: CTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASVAQR*AGRTPV
Trigger: CACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCCTCCACCTCAGCCTaGGCTTTCTGTTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPSTSA*AFCCSA
Trigger: CGCTGAGCAACAGAAAGCGCAGGCTGAGGTGGAGGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCCTCCACCTCAGCCTaGGCTTTCTGTTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPSTSA*AFCCSA
Trigger: CGCTGAGCAACAGAAAGCGCAGGCTGAGGTGGAGGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGACCTGTTCCAGCTTaGCCAGGGTCAGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGPVPA*PGSVPT
Trigger: AGTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGAATACTGGCTGCTGTaGCTCGGCCTGGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSEYWLL*LGLGPQ
Trigger: CTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTGTTGAATACTGGCTaGTGTGCCTCGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVLNTG*CASAWA
Trigger: GGCCCAGGCCGAGGCACAGCAGCCAGTATTCAACAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTGGATCTGCTCTTaGCGCCTCTTGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAWICS*RLLASC
Trigger: GCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCACGGCCTGGATCTaGTCTTGCCGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGTAWI*SCRLLA
Trigger: TGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTCGCTGTAGCGCGTaGGCAGATCCACGTACTCCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWARCSA*ADPRTP
Trigger: AGGAGTACGTGGATCTGCGCACGCGCTACAGCGAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTCGCTGTAGCGCGTaGGCAGATCCACGTACTCCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQARCSA*ADPRTP
Trigger: AGGAGTACGTGGATCTGCGCACGCGCTACAGCGAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCTCTGCCCGCTGTTaGTCAGCCAGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSARC*SASRSS
Trigger: GGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTCTGCCCGCTGTTaGTCAGCCAGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSARC*SASRSS
Trigger: GGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCTCTGCCCGCTGTTaGTCAGCCAGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSARC*SASRSS
Trigger: GGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASASCR*FSSAAS
Trigger: GGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGTGCCTCAGCTAGCTaGCGCTGCTTCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCASAS*RCFSSA
Trigger: TGCGCTGGAGAAGCAGCGGCAGCTAGCTGAGGCACA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGTGCCTCAGCTAGCTaGCGCTGCTTCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCASAS*RCFSSA
Trigger: TGCGCTGGAGAAGCAGCGGCAGCTAGCTGAGGCACA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRATSS*MRRCSS
Trigger: AGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRATSS*MRRCSS
Trigger: AGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRATSS*MRRCSS
Trigger: AGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCGCTTCTGCTGCTGTaGGTCCACTGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAALLLL*VHCCLL
Trigger: GAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGCTGCGCTTCTGCTaGTGTGCGTCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMLRFC*CASTAA
Trigger: GGCAGCAGTGGACGCACAGCAGCAGAAGCGCAGCAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTTGGCCTGGATCTCTaGCTCCGAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLGLDL*LRALPQ
Trigger: CTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTTGGCCTGGATCTCTaGCTCCGAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLGLDL*LRALPQ
Trigger: CTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTGCAGCCTCCACCTaGTGGGCCTTGGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASAAST*WALAWI
Trigger: GATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCATCCGGCTGCGTTCTaGAGCCTCCACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVHPAAF*SLHLLG
Trigger: GCCCAGCAGGTGGAGGCTGCAGAACGCAGCCGGATG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCATCCGGCTGCGTTCTaGAGCCTCCACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKHPAAF*SLHLLG
Trigger: GCCCAGCAGGTGGAGGCTGCAGAACGCAGCCGGATG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSAPPR*RSVVSS
Trigger: GCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSAPPR*RSVVSS
Trigger: GCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSAPPR*RSVVSS
Trigger: GCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCGCTTCTGCGCTTCTaGCTCCTCAGCCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPLLRF*LLSPSA
Trigger: CGCGCTCGGGCTGAGGAGGCAGAAGCGCAGAAGCGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCTCATCCTGCACCTaGCTTCGCAAGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLSSCT*LRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGQLCL*LPFALA
Trigger: AGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGQLCL*LPFALA
Trigger: AGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACGCAGGGCCAGCTCTaGCTCTGCCTGCCGTTTGCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTQGQL*LCLPFA
Trigger: CGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACGCAGGGCCAGCTCTaGCTCTGCCTGCCGTTTGCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTQGQL*LCLPFA
Trigger: CGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACGCAGGGCCAGCTCTaGCTCTGCCTGCCGTTTGCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTQGQL*LCLPFA
Trigger: CGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCGGCCTCCTCGGCCTaGAGTCTCAGCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASASSA*SLSSSR
Trigger: CCTGGATGAGCTGAGACTGCAGGCCGAGGAGGCCGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVSRAT*TWRARS
Trigger: AGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVSRAT*TWRARS
Trigger: AGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTCCGCACTGCGCTGTaGCGTCTCCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKFRTAL*RLQGHL
Trigger: CAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTCCGCACTGCGCTGTaGCGTCTCCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVFRTAL*RLQGHL
Trigger: CAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAPLPH*AVPSPG
Trigger: CCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAPLPH*AVPSPG
Trigger: CCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCAGCTTGCTGCTGTaGCCGTCGCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLSLLL*PSLGLL
Trigger: GAGGAGGCCGAGCGACGGGCACAGCAGCAAGCTGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCTCAGCCTCAGCTTaGTGCTGTGCCCGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRSASA*CCARRS
Trigger: CGAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCACCTCTTCTGCCTaGAGCCGCAGCCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSATSSA*SRSRSA
Trigger: AGCACTGCGGCTGCGGCTGCAGGCAGAAGAGGTGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCTTCTCCAGCTCCTaGTCCGCCAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCFSSS*SASSRC
Trigger: GCAGCGGGAGCTGGCGGAGCAGGAGCTGGAGAAGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCTTCTCCAGCTCCTaGTCCGCCAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCFSSS*SASSRC
Trigger: GCAGCGGGAGCTGGCGGAGCAGGAGCTGGAGAAGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCTTCTCCAGCTCCTaGTCCGCCAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCFSSS*SASSRC
Trigger: GCAGCGGGAGCTGGCGGAGCAGGAGCTGGAGAAGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCGCTGCTGTGCGGTaGCCTCCGCCAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGAAVR*PPPAAA
Trigger: AGCGGCAGCTGGCGGAGGGCACCGCACAGCAGCGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRRISS*SAARRC
Trigger: GCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRRISS*SAARRC
Trigger: GCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGCTGCTGCTCACCTTaGTCTGTCTCGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRCCSP*SVSARR
Trigger: CCTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCAGCTGCCGCTGCTaGTCACCTTGCTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSCRC*SPCSVS
Trigger: CGAGACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCAGCAGCTGCCGCTaGTGCTCACCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSSCR*CSPCSV
Trigger: GACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCTGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASANCL*LLASSA
Trigger: GGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCGGCATCCTCCTCTaGCAACTGCCTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGGILL*QLPLPL
Trigger: AAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGAAGGCCTCGTCTTCTaGCAGGCGCCTCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVEGLVF*QAPQAL
Trigger: GAGCGCCTGAGGCGCCTGGCAGAAGACGAGGCCTTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGAAGGCCTCGTCTTCTaGCAGGCGCCTCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSEGLVF*QAPQAL
Trigger: GAGCGCCTGAGGCGCCTGGCAGAAGACGAGGCCTTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLCSAA*SSRRRR
Trigger: GCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSMSAL*SAACSS
Trigger: GGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSMSAL*SAACSS
Trigger: GGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRSLMP*AAGPGA
Trigger: AGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRSLMP*AAGPGA
Trigger: AGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATCTCCTCCTCCACCTaGCGCCGCTGTCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKISSST*RRCRRV
Trigger: CACCCTGCGACAGCGGCGGCAGGTGGAGGAGGAGAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATCTCCTCCTCCACCTaGCGCCGCTGTCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVISSST*RRCRRV
Trigger: CACCCTGCGACAGCGGCGGCAGGTGGAGGAGGAGAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCGCGTTGCTGCGAATaGGCCCCAGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPRCCE*APAPAP
Trigger: TGGAGCTGGAGCTGGGGCGCATTCGCAGCAACGCGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCGCGTTGCTGCGAATaGGCCCCAGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPRCCE*APAPAP
Trigger: TGGAGCTGGAGCTGGGGCGCATTCGCAGCAACGCGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGTCCTCCGCGTTGCTaGGAATGCGCCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACPPRC*ECAPAP
Trigger: TGGAGCTGGGGCGCATTCGCAGCAACGCGGAGGACA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTGTGTCCTCCGCGTTaGTGCGAATGCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLCPPR*CECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTGTGTCCTCCGCGTTaGTGCGAATGCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLCPPR*CECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWVPPAP*CALCPP
Trigger: CGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAAC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVPPAP*CALCPP
Trigger: CGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCTCCAGTTCCGCCTaGTCCTTGCTGCGCATTGTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQASSSA*SLLRIV
Trigger: CACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTCTGCTCCTCCTCTaGCGCCAACTGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPLLLL*RQLPLP
Trigger: CGGCAGCGGCAGTTGGCGGCAGAGGAGGAGCAGAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGTGCCACCTTGCGCTaGCGAGCGGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSATLR*RAASSS
Trigger: GGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGTGCCACCTTGCGCTaGCGAGCGGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSATLR*RAASSS
Trigger: GGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGRLLL*PLSQAP
Trigger: CGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAFSSA*SRFWAA
Trigger: GGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPAPLP*AASLRP
Trigger: CGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPAPLP*AASLRP
Trigger: CGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALLFQR*LLCLGP
Trigger: CGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCATCTCCGCGTCGGCTaGCTGCTTCTGTTTCAGCGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWHLRVG*LLLFQR
Trigger: GCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCATCTCCGCGTCGGCTaGCTGCTTCTGTTTCAGCGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQHLRVG*LLLFQR
Trigger: GCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCAGTCTCCTCTAGCTaGAGCCTCAGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSVSSS*SLSVVS
Trigger: GCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASTWLR*RAASVT
Trigger: GGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTTCCTGCACCGCCTaGATCTTCTCCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASCTA*IFSFSI
Trigger: GATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTTCCTGCACCGCCTaGATCTTCTCCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASCTA*IFSFSI
Trigger: GATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSFCC*SSSASA
Trigger: GGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQASSFC*CSSSAS
Trigger: CGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASSFC*CSSSAS
Trigger: CGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGGCAAGCTCCTTCTaGTGCTGCAGCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWASSF*CCSSSA
Trigger: GGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATCTCCAGCTGCCGCTaGCGCTCGGCCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSISSCR*RSASRV
Trigger: GACTCTGGAGGCCGAGCGGCAGCGGCAGCTGGAGAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATCTCCAGCTGCCGCTaGCGCTCGGCCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVISSCR*RSASRV
Trigger: GACTCTGGAGGCCGAGCGGCAGCGGCAGCTGGAGAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATCTCCAGCTGCCGCTaGCGCTCGGCCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKISSCR*RSASRV
Trigger: GACTCTGGAGGCCGAGCGGCAGCGGCAGCTGGAGAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCGATCTCTTCAGCCTaGTTCCGGAAGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPISSA*FRKRWA
Trigger: CGCCCAGCGCTTCCGGAAGCAGGCTGAAGAGATCGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGATCTCCAGCGTCTaGACCAACGTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWISSV*TNVTFS
Trigger: GGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGAGAGGAAGCTCTTCTaGAGGGCCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWERKLF*RAWVSC
Trigger: GCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSLAFS*SMKRSR
Trigger: GCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSLAFS*SMKRSR
Trigger: GCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCACGCAGCTGCTTTaGTTTAGCCACCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLTQLL*FSHLVL
Trigger: CAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCTCCTCACGCAGCTaGTTTGCTTTAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCSSRS*FALATS
Trigger: CGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCTGTTCCATCTGCTaGTGCTGCCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSCSIC*CCRCCS
Trigger: GGAGCAGCAGCGGCAGCAGCAGCAGATGGAACAGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCTGGCCTCCTCCATaGTGGCCATCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSWPPP*WPSAPA
Trigger: AGCAGGAGCTGATGGCCAGCATGGAGGAGGCCAGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCTGGCCTCCTCCATaGTGGCCATCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSWPPP*WPSAPA
Trigger: AGCAGGAGCTGATGGCCAGCATGGAGGAGGCCAGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCAGTTCCTCTTGCTTaGGCCTCACGCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAVPLA*ASRPPQ
Trigger: CTGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCAGTTCCTCTTGCTTaGGCCTCACGCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAVPLA*ASRPPQ
Trigger: CTGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCTGCTGCTCCAGATaGTGCAGTTCCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRCCSR*CSSSCL
Trigger: CAAGCAAGAGGAACTGCAGCATCTGGAGCAGCAGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCTGCTGCTCCAGATaGTGCAGTTCCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRCCSR*CSSSCL
Trigger: CAAGCAAGAGGAACTGCAGCATCTGGAGCAGCAGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCTGCTGCCGCTGCTaGTCCAGATGCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCCCRC*SRCCSS
Trigger: GGAACTGCAGCATCTGGAGCAGCAGCGGCAGCAGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCCTGTGCCAAACGCTaGAGTTCCTCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPCAKR*SSSWLR
Trigger: CCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTAACAGTCCTGCAATaGTGCTGCGGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVTVLQ*CCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTAACAGTCCTGCAATaGTGCTGCGGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVTVLQ*CCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGATGGTCACGGTCCTaGCCTGGAACTTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRWSRS*PGTCQT
Trigger: CGTTTGGCAAGTTCCAGGGCAGGACCGTGACCATCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCCGTGCGGAACTGCTaGAGCAGGTCCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPVRNC*SRSRRC
Trigger: ACAGCGACGGGACCTGCTGCAGCAGTTCCGCACGGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCCGTGCGGAACTGCTaGAGCAGGTCCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPVRNC*SRSRRC
Trigger: ACAGCGACGGGACCTGCTGCAGCAGTTCCGCACGGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGCCCGTGCGGAACTaGTGCAGCAGGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWPVRN*CSRSRR
Trigger: GCGACGGGACCTGCTGCAGCAGTTCCGCACGGGCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACTGTCCAGCAGCTCTaGGGCGGGCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTVQQL*GGHEGT
Trigger: CGTGCCCTCGTGCCCGCCGCAGAGCTGCTGGACAGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQKDSLS*RRVSTS
Trigger: GGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWKDSLS*RRVSTS
Trigger: GGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGGCAGCCGCTGCCCTaGAGCAGAGTCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRQPLP*SRVRTE
Trigger: CTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCGGAAGGTCAGCTTaGGGGCATCAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRGRSA*GHQRAA
Trigger: TGCTGCTCTCTGATGCCCGCAAGCTGACCTTCCGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCGGTGGCTGCCTGTaGTTCCAGGAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAGGCL*FQELKG
Trigger: GCCTTTGAGCTCCTGGAAGCACAGGCAGCCACCGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGACATAGCCGGTGGCTaGCTGTGCTTCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWDIAGG*LCFQEL
Trigger: GAGCTCCTGGAAGCACAGGCAGCCACCGGCTATGTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGACATAGCCGGTGGCTaGCTGTGCTTCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQDIAGG*LCFQEL
Trigger: GAGCTCCTGGAAGCACAGGCAGCCACCGGCTATGTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCCAGCAGACGGATaGCATGGTCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPPADG*HGPSGS
Trigger: TGATCCTGAAGGACCATGGCATCCGTCTGCTGGAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGAAGCCACCGGCATTaGCTGAGAGCATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGSHRH*LRACQQ
Trigger: TTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTCTGTGTCCAGGATaGCGGCCACGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASLCPG*RPRGQS
Trigger: AGACTGGCCCCGTGGCCGGCATCCTGGACACAGAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCACCGGTCAGGTACTaGACCTCCAGGAAACGCTGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPPVRY*TSRKRW
Trigger: CCAGCGTTTCCTGGAGGTGCAGTACCTGACCGGTGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCCCTCCTCCACCATaGTACGGTCCAGAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCPPPP*YGPERP
Trigger: AGGACGCTCTGGACCGTAGCATGGTGGAGGAGGGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCCTTGCTGGACTGTaGCGCAGCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSALAGL*RSLQQP
Trigger: AGGCTGCTGGAGGCTGCGGCACAGTCCAGCAAGGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCCTTGCTGGACTGTaGCGCAGCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVALAGL*RSLQQP
Trigger: AGGCTGCTGGAGGCTGCGGCACAGTCCAGCAAGGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCTGTAGTAGCCCTTaGTGGACTGTGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGCSSP*WTVPQP
Trigger: AGGCTGCGGCACAGTCCAGCAAGGGCTACTACAGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACAGTGGCATCAAAGCTaGCACGCCGGGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRQWHQS*HAGSRP
Trigger: GGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCATGGGGATGCAGGCTaGGGGGTCGCCGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKHGDAG*GVAGPS
Trigger: AGAAGGACCGGCGACCCCGCAGCCTGCATCCCCATG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGGGAGATGAGGTTGTaGCCATCACGGAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDREMRL*PSRRSS
Trigger: CGAAGACCTCCGTGATGGCCACAACCTCATCTCCCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCCGAGGGTCAGCTTaGGGTTGCCGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGRGSA*GCRQQC
Trigger: ACATTGCTGACGGCAACCCCAAGCTGACCCTCGGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCCGAGGGTCAGCTTaGGGTTGCCGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGRGSA*GCRQQC
Trigger: ACATTGCTGACGGCAACCCCAAGCTGACCCTCGGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCACCGAGAATGCCTaGTCTAGGTTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDATENA*SRFSRL
Trigger: CAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCACCGAGAATGCCTaGTCTAGGTTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMATENA*SRFSRL
Trigger: CAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGTAGGGCGTCCGCCTaGTTCAGCTGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSRASA*FSCSSH
Trigger: GTGTGAGGAGCAGCTGAACCAGGCGGACGCCCTACT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGTAGGGCGTCCGCCTaGTTCAGCTGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSRASA*FSCSSH
Trigger: GTGTGAGGAGCAGCTGAACCAGGCGGACGCCCTACT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCTQCG*LPGAHA
Trigger: TGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCTGCAGGGTCACCTaGGTCACAGGGGCACCCACT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALCRVT*VTGAPT
Trigger: AGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAGSAV*SPLALG
Trigger: GCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTGGGCCTCCACACTaGGCAAGTCCACGCCCCACT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAGPPH*ASPRPT
Trigger: AGTGGGGCGTGGACTTGCCCAGTGTGGAGGCCCAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTGGGCCTCCACACTaGGCAAGTCCACGCCCCACT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAGPPH*ASPRPT
Trigger: AGTGGGGCGTGGACTTGCCCAGTGTGGAGGCCCAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGGTGGCTGCCCAGCTaGGCCTCCACACTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRWLPS*ASTLGK
Trigger: CTTGCCCAGTGTGGAGGCCCAGCTGGGCAGCCACCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGTAGGCACCCCGGGTaGCAGGGGAGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGRHPG*QGRAGS
Trigger: AGAGCCAGCTCTCCCCTGCCACCCGGGGTGCCTACC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTGGGP*RSSAAL
Trigger: CAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTGGGP*RSSAAL
Trigger: CAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTGGGCCGGGCAGGATaGTCTTCCCGCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVGRAG*SSRSSL
Trigger: CAGGCTGCTGCGGGAAGACCATCCTGCCCGGCCCAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCAGGACCCACCAGCTaGCATTGGTCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAGPTS*HWSPLC
Trigger: GCACAAGGGTGACCAATGCCAGCTGGTGGGTCCTGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTCCAGTGGGATGGCTaGGCAGGACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAFQWDG*AGPTSW
Trigger: CCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGAGCACCTTCCAGTaGGATGGCTGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALSTFQ*DGWAGP
Trigger: GGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCTGGGCCTCCTGGTTaGGCGGCGGCACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPGPPG*AAAQES
Trigger: GCTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTGGGCCTCCTGGTTaGGCGGCGGCACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPGPPG*AAAQES
Trigger: GCTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTGGGCCTCCTGGTTaGGCGGCGGCACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPGPPG*AAAQES
Trigger: GCTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTTCCTGGGCCTCCTaGTTGGGCGGCGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASWAS*LGGGTR
Trigger: TCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGAAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTTCCTGGGCCTCCTaGTTGGGCGGCGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVASWAS*LGGGTR
Trigger: TCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGAAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTAGCGACAGCTTCCTaGGCCTCCTGGTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLATAS*ASWLGG
Trigger: GCCGCCCAACCAGGAGGCCCAGGAAGCTGTCGCTAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTAGCGACAGCTTCCTaGGCCTCCTGGTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLATAS*ASWLGG
Trigger: GCCGCCCAACCAGGAGGCCCAGGAAGCTGTCGCTAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGVLIQ*QPQTVH
Trigger: GTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATPSAE*VQQVTA
Trigger: AGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVAGTA*ASFSCS
Trigger: GGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVAGTA*ASFSCS
Trigger: GGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVAGTA*ASFSCS
Trigger: GGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAAGCTCTTGGAGAGTaGCAGGCACAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQALGE*QAQPGP
Trigger: AGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCTGTGCCTCGGCCTaGGCCCGCAGCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCCASA*ARSFFS
Trigger: ACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSALAAS*HPAARR
Trigger: GCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKALAAS*HPAARR
Trigger: GCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTATTGGCACGGCCTaGATCTGCTCTTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAIGTA*ICSCRL
Trigger: GAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTATTGGCACGGCCTaGATCTGCTCTTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAIGTA*ICSCRL
Trigger: GAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATCCAGACTGAACCTTaGGCTTCTTGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMIQTEP*ASWQGR
Trigger: CCTCCCCTGCCAAGAAGCCCAAGGTTCAGTCTGGAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAASSSA*ALAWAC
Trigger: ACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCTGCCGTTTGCGCTaGCTCTCATCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAACRLR*LSSCTC
Trigger: GCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCGCAGTGCTTCATTaGCCTTCAGCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAAVLH*PSAASA
Trigger: AGCGCTGGCAGCTGAAGGCCAATGAAGCACTGCGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCGCAGTGCTTCATTaGCCTTCAGCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAAVLH*PSAASA
Trigger: AGCGCTGGCAGCTGAAGGCCAATGAAGCACTGCGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTGCGTGGCTGCGGTaGCCTCGTGCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSAWLR*PRAVAG
Trigger: CCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSASSS*RFCVAA
Trigger: CGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSASSS*RFCVAA
Trigger: CGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSASSS*RFCVAA
Trigger: CGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCAGACGCCGCCGCTaGAAGGCCTCGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSRRRR*KASSSA
Trigger: GGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCAGACGCCGCCGCTaGAAGGCCTCGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSRRRR*KASSSA
Trigger: GGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCAGACGCCGCCGCTaGAAGGCCTCGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSRRRR*KASSSA
Trigger: GGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGATGCCTTGCGCAGCTaGGCCAGGCGCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVDALRS*ARRSSM
Trigger: CATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGATGCCTTGCGCAGCTaGGCCAGGCGCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSDALRS*ARRSSM
Trigger: CATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCTCCTGCTCTACCTaGGCCTTCTGCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSCST*AFCRSV
Trigger: GACACTCCGGCAGAAGGCCCAGGTAGAGCAGGAGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCTCCTGCTCTACCTaGGCCTTCTGCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSCST*AFCRSV
Trigger: GACACTCCGGCAGAAGGCCCAGGTAGAGCAGGAGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCTCCTCCTCTACCTaGCTGCGCTGCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSSST*LRCRAA
Trigger: GGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSRAAS*AATLNR
Trigger: ACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGCCGGGCCTGCTCCTaGGCAAGCTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRRACS*ASSFCC
Trigger: GCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTCCAGAGTCCTCTaGAAACCCTGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASRVL*KPCVSS
Trigger: AGAGGAGACACAGGGTTTCCAGAGGACTCTGGAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCCAGAGTCCTCTaGAAACCCTGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASRVL*KPCVSS
Trigger: AGAGGAGACACAGGGTTTCCAGAGGACTCTGGAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRRSAS*SLCCRW
Trigger: CCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRRSAS*SLCCRW
Trigger: CCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTCCAGCTCCGCAATaGCCTCCCTCAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAPAPQ*PPSDAR
Trigger: CCGAGCGTCTGAGGGAGGCCATTGCGGAGCTGGAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTCCAGCTCCGCAATaGCCTCCCTCAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAPAPQ*PPSDAR
Trigger: CCGAGCGTCTGAGGGAGGCCATTGCGGAGCTGGAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTCCAGCTCCGCAATaGCCTCCCTCAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAPAPQ*PPSDAR
Trigger: CCGAGCGTCTGAGGGAGGCCATTGCGGAGCTGGAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTAGCCACCTCGTCCTaGAAGAGCTGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLATSS*KSCSSL
Trigger: CAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGCTCTCGCAGCCGCTaGTTTTCCTCCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRSRSR*FSSARS
Trigger: GCTCCTGGCGGAGGAAAACCAGCGGCTGCGAGAGCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGCTCTCGCAGCCGCTaGTTTTCCTCCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRSRSR*FSSARS
Trigger: GCTCCTGGCGGAGGAAAACCAGCGGCTGCGAGAGCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGGCAGTGCCTTCGTaGAAGCGGCCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWAVPS*KRPGWW
Trigger: CCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVHPGR*AVPSWK
Trigger: CTTCCACGAAGGCACTGCCCAACGGCCGGGATGCAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCTGCAGTTCCTCCTaGCTCAGGATGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRCSSS*LRMPAS
Trigger: GGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGCTGCAGTTCCTCCTaGCTCAGGATGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRCSSS*LRMPAS
Trigger: GGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCACAGGCACACGGTaGCTGTGCACAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSTGTR*LCTGSM
Trigger: CATTGATCCTGTGCACAGCCACCGTGTGCCTGTGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCACAGGCACACGGTaGCTGTGCACAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSTGTR*LCTGSM
Trigger: CATTGATCCTGTGCACAGCCACCGTGTGCCTGTGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCCTTATCTGTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSLICE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCACAGATAAGGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACGGTGCAGACACGGTaGCCTTTTCGAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTVQTR*PFRRRH
Trigger: GTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACGGTGCAGACACGGTaGCCTTTTCGAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTVQTR*PFRRRH
Trigger: GTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPSKQS*PFRSCS
Trigger: GGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCCACAGCCACCTCTaGCTGCAGCAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGHSHL*LQQVFL
Trigger: AAGAAAGACTTGCTGCAGCCAGAGGTGGCTGTGGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCACAGCCACCTCTaGCTGCAGCAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGHSHL*LQQVFL
Trigger: AAGAAAGACTTGCTGCAGCCAGAGGTGGCTGTGGCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCCCAGTGCCAGCCTaGGCCTCCAGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCPVPA*ASSKAT
Trigger: TGTGGCCTTGCTGGAGGCCCAGGCTGGCACTGGGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCCCAGTGCCAGCCTaGGCCTCCAGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCPVPA*ASSKAT
Trigger: TGTGGCCTTGCTGGAGGCCCAGGCTGGCACTGGGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGTCCACAGTCAGCCTaGCGCTGGTGGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRPQSA*RWWQGR
Trigger: TCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGTCCACAGTCAGCCTaGCGCTGGTGGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRPQSA*RWWQGR
Trigger: TCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGGCTCCTGGGTGCTaGGGTCATGGTAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLAPGC*GHGRLW
Trigger: CCAGAGTCTACCATGACCCCAGCACCCAGGAGCCAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGGCTGTAGGTGACTaGCTCCTGGGTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALAVGD*LLGAGV
Trigger: GACCCCAGCACCCAGGAGCCAGTCACCTACAGCCAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCAAGCCGGTCAGCTaGTCAGACCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALKPVS*SDRHRC
Trigger: ACAGCGGTGCCGGTCTGACCAGCTGACCGGCTTGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGTCCAGGAGCTCACTaGCCGGCACAGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRPGAH*PAQGHG
Trigger: TCCGTGCCCCTGTGCCGGCCAGTGAGCTCCTGGACG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGACATACAGACGTTaGTTCCGCACAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWTYRR*FRTGST
Trigger: GGTGGACCCTGTGCGGAACCAACGTCTGTATGTCCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACAGCAGCTTCTCATaGAGTTCAGGGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDDSSFS*SSGPTT
Trigger: CGTAGTGGGCCCTGAACTCCATGAGAAGCTGCTGTC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGACAGCAGCTTCTCATaGAGTTCAGGGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMDSSFS*SSGPTT
Trigger: CGTAGTGGGCCCTGAACTCCATGAGAAGCTGCTGTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTGGAACAGCGAGATaGTGTTGCCCGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPGTAR*CCPSRD
Trigger: ATCCCTACTCGGGCAACACCATCTCGCTGTTCCAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTGGAACAGCGAGATaGTGTTGCCCGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPGTAR*CCPSRD
Trigger: ATCCCTACTCGGGCAACACCATCTCGCTGTTCCAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCAGGCCCTTTTTCATaGCCTGGAACAGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPGPFS*PGTARW
Trigger: CCATCTCGCTGTTCCAGGCCATGAAAAAGGGCCTGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCAGGCCCTTTTTCATaGCCTGGAACAGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPGPFS*PGTARW
Trigger: CCATCTCGCTGTTCCAGGCCATGAAAAAGGGCCTGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCACAGGCAGGCGGTaGCTGTGCACCGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSTGRR*LCTGSM
Trigger: CATCGACCCGGTGCACAGCCACCGCCTGCCTGTGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCACAGGCAGGCGGTaGCTGTGCACCGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSTGRR*LCTGSM
Trigger: CATCGACCCGGTGCACAGCCACCGCCTGCCTGTGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCTGCCCCTTTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLCPFE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCAAAGGGGCAGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCTGCCCCTTTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLCPFE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCAAAGGGGCAGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATGGAGGAGCCACCGTaGCTGCCACCACCCGGGATG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSMEEPP*LPPPGM
Trigger: CATCCCGGGTGGTGGCAGCCACGGTGGCTCCTCCAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCGCTCCCCCTTCACTaGGTCCAGCAGGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPLPLH*VQQEAR
Trigger: ACGGGCTTCCTGCTGGACCCAGTGAAGGGGGAGCGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCTGCGCACCTCGCTaGGCTCCGACAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSCAPR*APTAGR
Trigger: ACGACCAGCTGTCGGAGCCCAGCGAGGTGCGCAGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCTGCGCACCTCGCTaGGCTCCGACAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSCAPR*APTAGR
Trigger: ACGACCAGCTGTCGGAGCCCAGCGAGGTGCGCAGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCTGCGCACCTCGCTaGGCTCCGACAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSCAPR*APTAGR
Trigger: ACGACCAGCTGTCGGAGCCCAGCGAGGTGCGCAGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCAGCAGCAGCATCTaGCCGCTGGGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSSSI*PLGSSR
Trigger: CCGTGATGACCCCAGCGGCCAGATGCTGCTGCTGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCCTTCTTCATAGCCTaGTACACCGAGAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPFFIA*YTESRS
Trigger: GGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCCTTCTTCATAGCCTaGTACACCGAGAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPFFIA*YTESRS
Trigger: GGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGACACAGGCCCGTCTaGGGGTCAGTGATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARHRPV*GSVMQR
Trigger: GCGCTGCATCACTGACCCCCAGACGGGCCTGTGTCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTCCTTGCCCGTCTCTaGGTCCACAATCACCACGCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLLARL*VHNHHA
Trigger: CGCGTGGTGATTGTGGACCCAGAGACGGGCAAGGAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCCTTGCCCGTCTCTaGGTCCACAATCACCACGCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLLARL*VHNHHA
Trigger: CGCGTGGTGATTGTGGACCCAGAGACGGGCAAGGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCAGGTACGTCTGGTaGTCAATGAGACCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSRYVW*SMRPLR
Trigger: CCGCAAGGGTCTCATTGACCACCAGACGTACCTGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCAGGTACGTCTGGTaGTCAATGAGACCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSRYVW*SMRPLR
Trigger: CCGCAAGGGTCTCATTGACCACCAGACGTACCTGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSMSY*RPERRS
Trigger: CGACCGCCGCTCTGGTCGCCAGTATGACATCGACGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGACCAGGAGGCTAGCTaGGTCCTGGGGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGADQEAS*VLGPAE
Trigger: TTCTGCTGGCCCCAGGACCCAGCTAGCCTCCTGGTC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCTCCAGCAGCCGCTaGCCGGTGATGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAASSSR*PVMLST
Trigger: GGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGGTCCCCACGGTGGTaGCAGACACCACAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGSPRW*QTPQGF
Trigger: AAACCCCTGTGGTGTCTGCCACCACCGTGGGGACCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTTCCAGCAGGGAGATaGGGTTGTGGCCATCACGGA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLPAGR*GCGHHG
Trigger: TCCGTGATGGCCACAACCTCATCTCCCTGCTGGAAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTTCCAGCAGGGAGATaGGGTTGTGGCCATCACGGA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLPAGR*GCGHHG
Trigger: TCCGTGATGGCCACAACCTCATCTCCCTGCTGGAAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGACTGTCCGCTCACCTaGATGTCTGAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMDCPLT*MSEIWK
Trigger: CTTCCAGATCTCAGACATTCAGGTGAGCGGACAGTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCCAGGGGGAATCTTaGGCTGGCCCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASQGES*AGPLVL
Trigger: CAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTGCTCACAATGCGCTaGAGACACTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLLTMR*RHSSLS
Trigger: TGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACTTCCCCAGCTCGCTaGGCCACCTTGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTSPAR*ATLPEA
Trigger: GGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGTGTGACCAGGGCCTaGTGCTGCGCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASVTRA*CCASSL
Trigger: TAGACTGGAGGCGCAGCATCAGGCCCTGGTCACACT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCAACCTTCTCACCATaGCGCTCAATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSTFSP*RSISSS
Trigger: GCTGGAGGAGATTGAGCGTCATGGTGAGAAGGTTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCACGGGTTCAAGCTaGGCCTTGTACGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQATGSS*ALYVIS
Trigger: GCTGATCACGTACAAGGCTCAGCTTGAACCCGTGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCACGGGTTCAAGCTaGGCCTTGTACGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWATGSS*ALYVIS
Trigger: GCTGATCACGTACAAGGCTCAGCTTGAACCCGTGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGTTCAGCTTCCTCCTaGGCCTGCCGCTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRSASS*ACRFCA
Trigger: AGCGCAGAAGCGGCAGGCTCAGGAGGAAGCTGAACG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGTTCAGCTTCCTCCTaGGCCTGCCGCTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRSASS*ACRFCA
Trigger: AGCGCAGAAGCGGCAGGCTCAGGAGGAAGCTGAACG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCGTGTGGCCTCACTaGTGGCAGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAVWPH*WQPASQ
Trigger: CTGAGAAGCTGGCTGCCATCAGTGAGGCCACACGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCGTGTGGCCTCACTaGTGGCAGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAVWPH*WQPASQ
Trigger: CTGAGAAGCTGGCTGCCATCAGTGAGGCCACACGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCGTGTGGCCTCACTaGTGGCAGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAVWPH*WQPASQ
Trigger: CTGAGAAGCTGGCTGCCATCAGTGAGGCCACACGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTTCAATGCGAGCCTTaGGCTTGCCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLQCEP*ACPAPP
Trigger: TGGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTTCAATGCGAGCCTTaGGCTTGCCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLQCEP*ACPAPP
Trigger: TGGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPSPAR*SARAAA
Trigger: TGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPSPAR*SARAAA
Trigger: TGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPSPAR*SARAAA
Trigger: TGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCAGCCACCGTGGTGTaGCCCTGTGCCAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSATVV*PCAKRC
Trigger: GCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTTCACAGCCTCATTaGCTGTCAGCCGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPSQPH*LSAADS
Trigger: GGAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTTCACAGCCTCATTaGCTGTCAGCCGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPSQPH*LSAADS
Trigger: GGAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGTCCTTGTAGCCGGTaGCGGCACGCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGPCSR*RHAQLT
Trigger: TGTCAGCTGAGCGTGCCGTCACCGGCTACAAGGACC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGTCCTTGTAGCCGGTaGCGGCACGCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGPCSR*RHAQLT
Trigger: TGTCAGCTGAGCGTGCCGTCACCGGCTACAAGGACC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGTCCTTGTAGCCGGTaGCGGCACGCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGPCSR*RHAQLT
Trigger: TGTCAGCTGAGCGTGCCGTCACCGGCTACAAGGACC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGCAGCCTTATCTGTaGGTGGCAGGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWQPYL*VAGGAG
Trigger: GCCTGCGCCTCCTGCCACTCACAGATAAGGCTGCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGGCAGCCTTATCTGTaGGTGGCAGGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKWQPYL*VAGGAG
Trigger: GCCTGCGCCTCCTGCCACTCACAGATAAGGCTGCCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGCAGCCTTATCTGTaGGTGGCAGGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWQPYL*VAGGAG
Trigger: GCCTGCGCCTCCTGCCACTCACAGATAAGGCTGCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGAGCTGGCTGTAGGTaGCTGGCTCCTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGAGCR*LAPGCW
Trigger: CCAGCACCCAGGAGCCAGTCACCTACAGCCAGCTCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGGCTGTGCTGGGTCTaGGGAGGCCCCGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVWLCWV*GGPGAW
Trigger: CCATGCGCCGGGGCCTCCTCAGACCCAGCACAGCCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCACTACGCCCGCCTTaGCAGCCTCATGGACATACA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPLRPP*QPHGHT
Trigger: TGTATGTCCATGAGGCTGTCAAGGCGGGCGTAGTGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPESQP*AGHADP
Trigger: AGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCATGGCCTGGAAGAGTaGGATGGTCTGTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMHGLEE*DGLFRV
Trigger: TACACGGAACAGACCATCTCACTCTTCCAGGCCATG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCATGGCCTGGAAGAGTaGGATGGTCTGTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDHGLEE*DGLFRV
Trigger: TACACGGAACAGACCATCTCACTCTTCCAGGCCATG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCAGCTCCTCCACAGTaGTCTGCTTGCGGAGACCGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPAPPQ*SACGDR
Trigger: GCGGTCTCCGCAAGCAGATCACTGTGGAGGAGCTGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCAGCTCCTCCACAGTaGTCTGCTTGCGGAGACCGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPAPPQ*SACGDR
Trigger: GCGGTCTCCGCAAGCAGATCACTGTGGAGGAGCTGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGTGGCCTCGTCCATaGCTTGAGAGCGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLWPRP*LESVPA
Trigger: AGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCGTCTGGGGGTCAGTaGTGCAGCGCTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPSGGQ*CSAPSA
Trigger: AGCTGATGGAGCGCTGCATCACTGACCCCCAGACGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCGTCTGGGGGTCAGTaGTGCAGCGCTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPSGGQ*CSAPSA
Trigger: AGCTGATGGAGCGCTGCATCACTGACCCCCAGACGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTSGGQ*DPCGRP
Trigger: AGGCCTACCGCAAGGGTCTCATTGACCACCAGACGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTSGGQ*DPCGRP
Trigger: AGGCCTACCGCAAGGGTCTCATTGACCACCAGACGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVLVQC*AVNEVL
Trigger: AAGAACCTCATTGACCGCTCAGCACTGGACCAGTAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVLVQC*AVNEVL
Trigger: AAGAACCTCATTGACCGCTCAGCACTGGACCAGTAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCACCGGCATTGCCTaGGAGCATGTCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQATGIA*EHVSKL
Trigger: GAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCACCGGCATTGCCTaGGAGCATGTCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWATGIA*EHVSKL
Trigger: GAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGGGCCAGCAGAACTaGTGGGGTAGGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWGQQN*WGRRKM
Trigger: CATCTTCCTCCTACCCCATCAGTTCTGCTGGCCCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGGGCCAGCAGAACTaGTGGGGTAGGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWGQQN*WGRRKM
Trigger: CATCTTCCTCCTACCCCATCAGTTCTGCTGGCCCCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCAGTGCTGGGGTCAATaGTGCCCCCGGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKQCWGQ*CPRCRL
Trigger: AAGCCTGCACCGGGGGCATCATTGACCCCAGCACTG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAGTGCTGGGGTCAATaGTGCCCCCGGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQCWGQ*CPRCRL
Trigger: AAGCCTGCACCGGGGGCATCATTGACCCCAGCACTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAGTGCTGGGGTCAATaGTGCCCCCGGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQCWGQ*CPRCRL
Trigger: AAGCCTGCACCGGGGGCATCATTGACCCCAGCACTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACTTGGAGTAAGCACTaGCATCACGCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTWSKH*HHAASG
Trigger: CCCAGAAGCTGCGTGATGTCAGTGCTTACTCCAAGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACTTGGAGTAAGCACTaGCATCACGCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTWSKH*HHAASG
Trigger: CCCAGAAGCTGCGTGATGTCAGTGCTTACTCCAAGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGTCAGCTTGGGGTTaGCGTCAGCAATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGSAWG*RQQCHH
Trigger: ATGATGACATTGCTGACGGCAACCCCAAGCTGACCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCCAGGTCCCGCTCTaGCACCGAGAATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSQVPL*HRECLV
Trigger: GACCAGGCATTCTCGGTGGCAGAGCGGGACCTGGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCCAGGTCCCGCTCTaGCACCGAGAATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSQVPL*HRECLV
Trigger: GACCAGGCATTCTCGGTGGCAGAGCGGGACCTGGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTCACTCCGTCCTGTaGACCAGGCACGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPHSVL*TRHAGH
Trigger: ATGCCCCGCGTGCCTGGTGCACAGGACGGAGTGAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCTCCCGGTACTCCTaGCAACGAAGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSRYS*QRSCSS
Trigger: TGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCTCCCGGTACTCCTaGCAACGAAGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSRYS*QRSCSS
Trigger: TGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCTGGAGGGGAACTTaGGCTCCTCAAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSWRGT*APQKQR
Trigger: CCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGACCGGTTTTTGTCTaGCTCCTTGGCAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGPVFV*LLGRKF
Trigger: GAACTTCCTGCCAAGGAGGCAGACAAAAACCGGTCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTGGCCCGCTTGTACTaGCCCCTCCAAAGACTGGTA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLARLY*PLQRLV
Trigger: TACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCAGGATGGCCACATaGAGCTTGCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSRMAT*SLPHSF
Trigger: GAAGGAGTGGGGCAAGCTGCATGTGGCCATCCTGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTAGCTTGCTCACAATaGGCTGAAGACACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVACSQ*AEDTPA
Trigger: GGCTGGAGTGTCTTCAGCGCATTGTGAGCAAGCTAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCGCCTGGTTCAGCTaGTCCTCACACAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSAWFS*SSHSPA
Trigger: GGCTGGGCTGTGTGAGGAGCAGCTGAACCAGGCGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCGCCTGGTTCAGCTaGTCCTCACACAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSAWFS*SSHSPA
Trigger: GGCTGGGCTGTGTGAGGAGCAGCTGAACCAGGCGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCSPCG*RPSLRV
Trigger: GACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCSPCG*RPSLRV
Trigger: GACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTACCAGGCGCTCATaGAGACGATACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAATRRS*RRYTLR
Trigger: CCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGGCTQ*GWLPGA
Trigger: AGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGGCTQ*GWLPGA
Trigger: AGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGGGGCACCCACTCCTaGCTTCAGCCGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARGTHS*LQPEVV
Trigger: TACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGCCTCTGTGTACTCTaGAGGGTCACCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRLCVL*RVTWVT
Trigger: TGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCAGCTCCACTGTGTCTaGAAGGCAGCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQQLHCV*KAAWKD
Trigger: GTCCTTCCAGGCTGCCTTGCAGACACAGTGGAGCTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAGCTCCACTGTGTCTaGAAGGCAGCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQLHCV*KAAWKD
Trigger: GTCCTTCCAGGCTGCCTTGCAGACACAGTGGAGCTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATGCAGCAACACAGCTaGAGCATCCAGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDMQQHS*SIQLHC
Trigger: ACAGTGGAGCTGGATGCTGCAGCTGTGTTGCTGCAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATGCAGCAACACAGCTaGAGCATCCAGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMMQQHS*SIQLHC
Trigger: ACAGTGGAGCTGGATGCTGCAGCTGTGTTGCTGCAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCATCCTGGGCATCCTaGAGCAGATCCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSWAS*SRSSSL
Trigger: CAGGCTCGAGGATCTGCTGCAGGATGCCCAGGATGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCCGACTGAGGCTCTaGCACGCCAGAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASRLRL*HARRLF
Trigger: GAAGAGCCTTCTGGCGTGGCAGAGCCTCAGTCGGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCTCCTGCTCACCCTaGTCCAGGCTTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSCSP*SRLCSN
Trigger: GTTACTACAAAGCCTGGAGCAGGGTGAGCAGGAGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTCCTGCTCACCCTaGTCCAGGCTTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSCSP*SRLCSN
Trigger: GTTACTACAAAGCCTGGAGCAGGGTGAGCAGGAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCACAGGCCTCCAGCTaGAGCCGGATATCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSQASS*SRISLS
Trigger: GCTCAAGGATATCCGGCTGCAGCTGGAGGCCTGTGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGSRRR*TVRVSQ
Trigger: CTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGSRRR*TVRVSQ
Trigger: CTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGSRRR*TVRVSQ
Trigger: CTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSVAQR*AGRTPV
Trigger: CACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSVAQR*AGRTPV
Trigger: CACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSVAQR*AGRTPV
Trigger: CACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTGCGCTTTCTGTTaGTCAGCGATGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKACAFC*SAMRWA
Trigger: CGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCTGCGCTTTCTGTTaGTCAGCGATGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVACAFC*SAMRWA
Trigger: CGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCCTCCACCTCAGCCTaGGCTTTCTGTTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPSTSA*AFCCSA
Trigger: CGCTGAGCAACAGAAAGCGCAGGCTGAGGTGGAGGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGAATACTGGCTGCTGTaGCTCGGCCTGGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGREYWLL*LGLGPQ
Trigger: CTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTGTTGAATACTGGCTaGTGTGCCTCGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVLNTG*CASAWA
Trigger: GGCCCAGGCCGAGGCACAGCAGCCAGTATTCAACAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTCACCAACCTCCTGTaGCCCCCGCAACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLTNLL*PPQLIS
Trigger: AGAGATGAGTTGCGGGGGGCACAGGAGGTTGGTGAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCACCAACCTCCTGTaGCCCCCGCAACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLTNLL*PPQLIS
Trigger: AGAGATGAGTTGCGGGGGGCACAGGAGGTTGGTGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCTGGCGGCCCAGCTaGTCGAGCTCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSWRPS*SSSRCR
Trigger: GCGGCAGCGTGAGCTCGAGCAGCTGGGCCGCCAGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGCACGGCCTGGATCTaGTCTTGCCGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGTAWI*SCRLLA
Trigger: TGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCACGGCCTGGATCTaGTCTTGCCGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGTAWI*SCRLLA
Trigger: TGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTCGCTGTAGCGCGTaGGCAGATCCACGTACTCCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAARCSA*ADPRTP
Trigger: AGGAGTACGTGGATCTGCGCACGCGCTACAGCGAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTCTGCCCGCTGTTaGTCAGCCAGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSARC*SASRSS
Trigger: GGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSASCR*FSSAAS
Trigger: GGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGTGCCTCAGCTAGCTaGCGCTGCTTCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACASAS*RCFSSA
Trigger: TGCGCTGGAGAAGCAGCGGCAGCTAGCTGAGGCACA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCGCTTCTGCTGCTGTaGGTCCACTGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSALLLL*VHCCLL
Trigger: GAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCGCTTCTGCTGCTGTaGGTCCACTGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKALLLL*VHCCLL
Trigger: GAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCGCTTCTGCTGCTGTaGGTCCACTGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVALLLL*VHCCLL
Trigger: GAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATGCTGCGCTTCTGCTaGTGTGCGTCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAMLRFC*CASTAA
Trigger: GGCAGCAGTGGACGCACAGCAGCAGAAGCGCAGCAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGATGCTGCGCTTCTaGTGCTGTGCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWMLRF*CCASTA
Trigger: AGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGATGCTGCGCTTCTaGTGCTGTGCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWMLRF*CCASTA
Trigger: AGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTCCTCTTGGATGCTaGGCTTCTGCTGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAPLGC*ASAAVR
Trigger: ACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTTGGCCTGGATCTCTaGCTCCGAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALGLDL*LRALPQ
Trigger: CTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTGCAGCCTCCACCTaGTGGGCCTTGGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSAAST*WALAWI
Trigger: GATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTGCAGCCTCCACCTaGTGGGCCTTGGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSAAST*WALAWI
Trigger: GATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCTGCAGCCTCCACCTaGTGGGCCTTGGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSAAST*WALAWI
Trigger: GATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACGCAGGGCCAGCTCTaGCTCTGCCTGCCGTTTGCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTQGQL*LCLPFA
Trigger: CGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCGGCCTCCTCGGCCTaGAGTCTCAGCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSASSA*SLSSSR
Trigger: CCTGGATGAGCTGAGACTGCAGGCCGAGGAGGCCGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCGGCCTCCTCGGCCTaGAGTCTCAGCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSASSA*SLSSSR
Trigger: CCTGGATGAGCTGAGACTGCAGGCCGAGGAGGCCGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVSRAT*TWRARS
Trigger: AGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTCCGCACTGCGCTGTaGCGTCTCCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRFRTAL*RLQGHL
Trigger: CAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAPLPH*AVPSPG
Trigger: CCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGGCCACTGTTACATaGTCCTCCTGCAGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWATVT*SSCRVR
Trigger: GCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGGCCACTGTTACATaGTCCTCCTGCAGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWATVT*SSCRVR
Trigger: GCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGCTCAGCCTCAGCTTaGTGCTGTGCCCGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRSASA*CCARRS
Trigger: CGAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCATTGGCCTTCAGCTaGCAGCGCTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSLAFS*QRSSSR
Trigger: GCGGGAGCTGGAGCGCTGGCAGCTGAAGGCCAATGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCATTGGCCTTCAGCTaGCAGCGCTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSLAFS*QRSSSR
Trigger: GCGGGAGCTGGAGCGCTGGCAGCTGAAGGCCAATGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCATTGGCCTTCAGCTaGCAGCGCTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSLAFS*QRSSSR
Trigger: GCGGGAGCTGGAGCGCTGGCAGCTGAAGGCCAATGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACAGCCGCAGCCGCAGTaGTTCATTGGCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAQPQPQ*FIGLQL
Trigger: CAGCTGAAGGCCAATGAAGCACTGCGGCTGCGGCTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGTGCCAGGCTCTTCTaGTGTGCCACCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCARLF*CATSSA
Trigger: GGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLGIGL*QALLLC
Trigger: GCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLGIGL*QALLLC
Trigger: GCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLGIGL*QALLLC
Trigger: GCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCTTCTCCAGCTCCTaGTCCGCCAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCFSSS*SASSRC
Trigger: GCAGCGGGAGCTGGCGGAGCAGGAGCTGGAGAAGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCCAGGCGCTGCTGTaGGGTGCCCTCCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSQALL*GALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRRISS*SAARRC
Trigger: GCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCAGCTGCCGCTGCTaGTCACCTTGCTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSCRC*SPCSVS
Trigger: CGAGACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCAGCAGCTGCCGCTaGTGCTCACCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSSCR*CSPCSV
Trigger: GACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCTGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSANCL*LLASSA
Trigger: GGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSANCL*LLASSA
Trigger: GGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSANCL*LLASSA
Trigger: GGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCGGCATCCTCCTCTaGCAACTGCCTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGGILL*QLPLPL
Trigger: AAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGTAAGCACCCGCTCTaGCTCGGCCCGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSKHPL*LGPLAG
Trigger: GCCCGCCAGCGGGCCGAGGCAGAGCGGGTGCTTACT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGAAGGCCTCGTCTTCTaGCAGGCGCCTCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGREGLVF*QAPQAL
Trigger: GAGCGCCTGAGGCGCCTGGCAGAAGACGAGGCCTTC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASMSAL*SAACSS
Trigger: GGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRSLMP*AAGPGA
Trigger: AGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATCTCCTCCTCCACCTaGCGCCGCTGTCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRISSST*RRCRRV
Trigger: CACCCTGCGACAGCGGCGGCAGGTGGAGGAGGAGAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCGCGTTGCTGCGAATaGGCCCCAGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPRCCE*APAPAP
Trigger: TGGAGCTGGAGCTGGGGCGCATTCGCAGCAACGCGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGTCCTCCGCGTTGCTaGGAATGCGCCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCPPRC*ECAPAP
Trigger: TGGAGCTGGGGCGCATTCGCAGCAACGCGGAGGACA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGTCCTCCGCGTTGCTaGGAATGCGCCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCPPRC*ECAPAP
Trigger: TGGAGCTGGGGCGCATTCGCAGCAACGCGGAGGACA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVPPAP*CALCPP
Trigger: CGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCTCCAGTTCCGCCTaGTCCTTGCTGCGCATTGTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAASSSA*SLLRIV
Trigger: CACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTCCCGGCGCCTCTaGTCCTCCTCTGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASRRL*SSSAAN
Trigger: GTTGGCGGCAGAGGAGGAGCAGAGGCGCCGGGAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTGCCAGGCTCCTCTaGACGCGCTCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAARLL*TRSSAS
Trigger: GGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGTGCCACCTTGCGCTaGCGAGCGGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSATLR*RAASSS
Trigger: GGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPAPLP*AASLRP
Trigger: CGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGACGCGCCGCCTCCTaGTCCGCTTCCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRRAAS*SASLRS
Trigger: GCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLLFQR*LLCLGP
Trigger: CGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSTWLR*RAASVT
Trigger: GGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTGCCAGGGCCCGCTaGTGCGCCAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSARAR*CARSSS
Trigger: GGAGGAGGACCTGGCGCAGCAGCGGGCCCTGGCAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSFCC*SSSASA
Trigger: GGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSFCC*SSSASA
Trigger: GGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSFCC*SSSASA
Trigger: GGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAASSFC*CSSSAS
Trigger: CGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGGCAAGCTCCTTCTaGTGCTGCAGCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWASSF*CCSSSA
Trigger: GGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVALISS*RCRSAS
Trigger: GGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCGATCTCTTCAGCCTaGTTCCGGAAGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPISSA*FRKRWA
Trigger: CGCCCAGCGCTTCCGGAAGCAGGCTGAAGAGATCGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCGATCTCTTCAGCCTaGTTCCGGAAGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPISSA*FRKRWA
Trigger: CGCCCAGCGCTTCCGGAAGCAGGCTGAAGAGATCGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCGATCTCTTCAGCCTaGTTCCGGAAGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPISSA*FRKRWA
Trigger: CGCCCAGCGCTTCCGGAAGCAGGCTGAAGAGATCGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCATCGTGGTCACTCTaGTGTCGCTGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQASWSL*CRWISS
Trigger: GCTGGAGATCCAGCGACAGCAGAGTGACCACGATGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCATCGTGGTCACTCTaGTGTCGCTGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASWSL*CRWISS
Trigger: GCTGGAGATCCAGCGACAGCAGAGTGACCACGATGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGAGAGGAAGCTCTTCTaGAGGGCCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAERKLF*RAWVSC
Trigger: GCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGAAGCGCTCGCGCTaGAGCAGGCTGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMKRSR*SRLSFS
Trigger: TGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATGAAGCGCTCGCGCTaGAGCAGGCTGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQMKRSR*SRLSFS
Trigger: TGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASLAFS*SMKRSR
Trigger: GCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCATCTGCTGCTGCTaGCGCTGCTGCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSICCC*RCCSSR
Trigger: GCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGATGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCATCTGCTGCTGCTaGCGCTGCTGCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSICCC*RCCSSR
Trigger: GCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGATGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCATCTGCTGCTGCTaGCGCTGCTGCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSICCC*RCCSSR
Trigger: GCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGATGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCTGTTCCATCTGCTaGTGCTGCCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASCSIC*CCRCCS
Trigger: GGAGCAGCAGCGGCAGCAGCAGCAGATGGAACAGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTGGCCATCAGCTCCTaGTTTTCCTGTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLAISS*FSCSIC
Trigger: GCAGATGGAACAGGAAAAGCAGGAGCTGATGGCCAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGGCCATCAGCTCCTaGTTTTCCTGTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLAISS*FSCSIC
Trigger: GCAGATGGAACAGGAAAAGCAGGAGCTGATGGCCAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCTCAGCCTCGCGCTaGCGCCTCCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSASR*RLLASS
Trigger: GGAGGAGGCCAGGAGGCGGCAGCGCGAGGCTGAGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPPGSG*LLPVAA
Trigger: AGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPPGSG*LLPVAA
Trigger: AGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCCTGTGCCAAACGCTaGAGTTCCTCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPCAKR*SSSWLR
Trigger: CCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTACACATCTTCCCGCTaGGTGAGCTCAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQYTSSR*VSSATV
Trigger: CACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTACACATCTTCCCGCTaGGTGAGCTCAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWYTSSR*VSSATV
Trigger: CACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAGGAAGCCCGAGGCTaGCTGGGCCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQEARG*LGLQQD
Trigger: ATCTTGCTGGAGGCCCAGGCAGCCTCGGGCTTCCTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCAGGAAGCCCGAGGCTaGCTGGGCCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKQEARG*LGLQQD
Trigger: ATCTTGCTGGAGGCCCAGGCAGCCTCGGGCTTCCTG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAGGAAGCCCGAGGCTaGCTGGGCCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQEARG*LGLQQD
Trigger: ATCTTGCTGGAGGCCCAGGCAGCCTCGGGCTTCCTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDELAKR*RHGGLF
Trigger: GAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMELAKR*RHGGLF
Trigger: GAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCTGCCCTGGAACTTaGCAAACGGTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSCPGT*QTVQTR
Trigger: CCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCCGTGCGGAACTGCTaGAGCAGGTCCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPVRNC*SRSRRC
Trigger: ACAGCGACGGGACCTGCTGCAGCAGTTCCGCACGGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCAGGGCCTCATAGATaGTCAGCTTCTGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSGPHR*SASALL
Trigger: AAGCAGGGCAGAAGCTGAGCATCTATGAGGCCCTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCAGGGTCGATGATATaGCCAGTGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAGSMI*PVPAWA
Trigger: GGCCCAGGCTGGCACTGGGCATATCATCGACCCTGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCAGGGTCGATGATATaGCCAGTGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAGSMI*PVPAWA
Trigger: GGCCCAGGCTGGCACTGGGCATATCATCGACCCTGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCCGCAGCAACTCCTaGCGCTGCTCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCRSNS*RCSSVK
Trigger: CTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCCGCAGCAACTCCTaGCGCTGCTCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCRSNS*RCSSVK
Trigger: CTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGGCCAGGCAGCCGCTaGCCTGCAGCAGAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRPGSR*PAAESA
Trigger: TGCGGACTCTGCTGCAGGGCAGCGGCTGCCTGGCCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTCCTGTGGCTAGCTaGGCATCCAGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPPVAS*ASSSLS
Trigger: GCTGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCTCCTGTGGCTAGCTaGGCATCCAGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPPVAS*ASSSLS
Trigger: GCTGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTCCTGTGGCTAGCTaGGCATCCAGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPPVAS*ASSSLS
Trigger: GCTGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCGGAAGGTCAGCTTaGGGGCATCAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARGRSA*GHQRAA
Trigger: TGCTGCTCTCTGATGCCCGCAAGCTGACCTTCCGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCTCCACAGTGATCTaGTTGCGGAGACCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSTVI*LRRPRK
Trigger: CTTCCGCGGTCTCCGCAAGCAGATCACTGTGGAGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPSRNF*RFLVTS
Trigger: GGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCGGTGGCTGCCTGTaGTTCCAGGAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAGGCL*FQELKG
Trigger: GCCTTTGAGCTCCTGGAAGCACAGGCAGCCACCGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCGGTGGCTGCCTGTaGTTCCAGGAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAGGCL*FQELKG
Trigger: GCCTTTGAGCTCCTGGAAGCACAGGCAGCCACCGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCACCACGCGGCGCTTaGGCACTGAGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSPRGA*ALRTWR
Trigger: CCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCACCACGCGGCGCTTaGGCACTGAGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSPRGA*ALRTWR
Trigger: CCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACACAGACATCTCCTTaGCCGTCTCTGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTQTSP*PSLGPQ
Trigger: TTGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTCTGTGTCCAGGATaGCGGCCACGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSLCPG*RPRGQS
Trigger: AGACTGGCCCCGTGGCCGGCATCCTGGACACAGAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCTCTGTGTCCAGGATaGCGGCCACGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSLCPG*RPRGQS
Trigger: AGACTGGCCCCGTGGCCGGCATCCTGGACACAGAGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACATCTTGGTCTTGGTaGGTGGGTCCTCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTSWSW*VGPQTH
Trigger: GTGGGTTTGAGGACCCACGCACCAAGACCAAGATGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACATCTTGGTCTTGGTaGGTGGGTCCTCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTSWSW*VGPQTH
Trigger: GTGGGTTTGAGGACCCACGCACCAAGACCAAGATGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCACCGGTCAGGTACTaGACCTCCAGGAAACGCTGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPPVRY*TSRKRW
Trigger: CCAGCGTTTCCTGGAGGTGCAGTACCTGACCGGTGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCGGGCATCCACAGTaGCACGTTGCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCGHPQ*HVAELR
Trigger: ACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCGGGCATCCACAGTaGCACGTTGCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCGHPQ*HVAELR
Trigger: ACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCAGCTTCTGGGCTGTaGGGGCATCCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAASGL*GHPQCH
Trigger: GTGGCACTGTGGATGCCCGCACAGCCCAGAAGCTGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCCCTCCTCCACCATaGTACGGTCCAGAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACPPPP*YGPERP
Trigger: AGGACGCTCTGGACCGTAGCATGGTGGAGGAGGGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCCTTGCTGGACTGTaGCGCAGCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRALAGL*RSLQQP
Trigger: AGGCTGCTGGAGGCTGCGGCACAGTCCAGCAAGGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCTGTAGTAGCCCTTaGTGGACTGTGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGCSSP*WTVPQP
Trigger: AGGCTGCGGCACAGTCCAGCAAGGGCTACTACAGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGGAGCTGATCTCGTaGTGGATGGCTCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRELIS*WMALEG
Trigger: CCCCTCAAGAGCCATCCAGCACGAGATCAGCTCCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071869.12
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGGCGGCGCACACGCTaGAGAGAGGCAGGTACAATC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGRRTR*REAGTI
Trigger: GATTGTACCTGCCTCTCTGCAGCGTGTGCGCCGCCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGTAGGGCGTCCGCCTaGTTCAGCTGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASRASA*FSCSSH
Trigger: GTGTGAGGAGCAGCTGAACCAGGCGGACGCCCTACT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCTGCAGGGTCACCTaGGTCACAGGGGCACCCACT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLCRVT*VTGAPT
Trigger: AGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCTGCAGGGTCACCTaGGTCACAGGGGCACCCACT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLCRVT*VTGAPT
Trigger: AGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAGSAV*SPLALG
Trigger: GCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTGGGCCTCCACACTaGGCAAGTCCACGCCCCACT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAGPPH*ASPRPT
Trigger: AGTGGGGCGTGGACTTGCCCAGTGTGGAGGCCCAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATGGGP*RSSAAL
Trigger: CAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGTTCCTTCTCATCCTaGGCATCCTGCAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCSFSS*ASCSRS
Trigger: GGATCTGCTGCAGGATGCCCAGGATGAGAAGGAACA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCCACCAGCTGGCATTaGTCACCCTTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPTSWH*SPLCTV
Trigger: GACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCAGGACCCACCAGCTaGCATTGGTCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAGPTS*HWSPLC
Trigger: GCACAAGGGTGACCAATGCCAGCTGGTGGGTCCTGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTCCAGTGGGATGGCTaGGCAGGACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSFQWDG*AGPTSW
Trigger: CCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTCCAGTGGGATGGCTaGGCAGGACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVFQWDG*AGPTSW
Trigger: CCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTCCAGTGGGATGGCTaGGCAGGACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKFQWDG*AGPTSW
Trigger: CCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCACCTTCCAGTGGGATaGCTGGGCAGGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSHLPVG*LGRTHQ
Trigger: CTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCACCTTCCAGTGGGATaGCTGGGCAGGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKHLPVG*LGRTHQ
Trigger: CTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGTG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCACCTTCCAGTGGGATaGCTGGGCAGGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVHLPVG*LGRTHQ
Trigger: CTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGAGCACCTTCCAGTaGGATGGCTGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLSTFQ*DGWAGP
Trigger: GGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTGAGCACCTTCCAGTaGGATGGCTGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLSTFQ*DGWAGP
Trigger: GGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTGAGCACCTTCCAGTaGGATGGCTGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLSTFQ*DGWAGP
Trigger: GGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTGGGCCTCCTGGTTaGGCGGCGGCACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPGPPG*AAAQES
Trigger: GCTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTTCCTGGGCCTCCTaGTTGGGCGGCGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASWAS*LGGGTR
Trigger: TCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGAAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTAGCGACAGCTTCCTaGGCCTCCTGGTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLATAS*ASWLGG
Trigger: GCCGCCCAACCAGGAGGCCCAGGAAGCTGTCGCTAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGVLIQ*QPQTVH
Trigger: GTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGVLIQ*QPQTVH
Trigger: GTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCSAMR*AHSRAG
Trigger: CCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTPSAE*VQQVTA
Trigger: AGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTPSAE*VQQVTA
Trigger: AGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTPSAE*VQQVTA
Trigger: AGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTTCTCCAGGTAGATaGCAGACAGGCTTCGGACCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVSPGR*QTGFGP
Trigger: AGGTCCGAAGCCTGTCTGCCATCTACCTGGAGAAAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVAGTA*ASFSCS
Trigger: GGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCCGCACATCTGTCTaGGCTAGAACAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCRTSV*ARTACQ
Trigger: CTGGCAGGCTGTTCTAGCCCAGACAGATGTGCGGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCCGCACATCTGTCTaGGCTAGAACAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCRTSV*ARTACQ
Trigger: CTGGCAGGCTGTTCTAGCCCAGACAGATGTGCGGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTATTGGCACGGCCTaGATCTGCTCTTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAIGTA*ICSCRL
Trigger: GAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCAGGGCCTTCTCCTaGCGCAGCTGTTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSRAFS*RSCSRA
Trigger: TGCGCGAGAACAGCTGCGCCAGGAGAAGGCCCTGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCAGGGCCTTCTCCTaGCGCAGCTGTTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSRAFS*RSCSRA
Trigger: TGCGCGAGAACAGCTGCGCCAGGAGAAGGCCCTGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCAGGGCCTTCTCCTaGCGCAGCTGTTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSRAFS*RSCSRA
Trigger: TGCGCGAGAACAGCTGCGCCAGGAGAAGGCCCTGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASSSA*ALAWAC
Trigger: ACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCTGCAGCTCCTCTTaGATGCTGCGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCCSSS*MLRFCC
Trigger: GCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCTGCCGTTTGCGCTaGCTCTCATCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVACRLR*LSSCTC
Trigger: GCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTGCCGTTTGCGCTaGCTCTCATCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKACRLR*LSSCTC
Trigger: GCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCGCAGTGCTTCATTaGCCTTCAGCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAAVLH*PSAASA
Trigger: AGCGCTGGCAGCTGAAGGCCAATGAAGCACTGCGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTGCCTCGGCCCGCTaGCGGGCGGCATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSASAR*RAASSS
Trigger: AGAGGAGGATGCCGCCCGCCAGCGGGCCGAGGCAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGATGCCTTGCGCAGCTaGGCCAGGCGCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRDALRS*ARRSSM
Trigger: CATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTGCAGCCGTTTCTaGGCGGCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVACSRF*AASWAS
Trigger: GCTGGCCCAGGAGGCCGCCCAGAAACGGCTGCAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCTCCTGCTCTACCTaGGCCTTCTGCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSCST*AFCRSV
Trigger: GACACTCCGGCAGAAGGCCCAGGTAGAGCAGGAGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSLCCR*ISSVCT
Trigger: GGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTCCAGCTCCGCAATaGCCTCCCTCAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAPAPQ*PPSDAR
Trigger: CCGAGCGTCTGAGGGAGGCCATTGCGGAGCTGGAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCTTCTGCAGGGCCTaGGTCTCCTGCAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLFCRA*VSCSIC
Trigger: GCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCGCTGCCGCCTCCTaGCCTCCTCCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRAAAS*PPPCWP
Trigger: TGGCCAGCATGGAGGAGGCCAGGAGGCGGCAGCGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWKRPG*WRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGGCAGTGCCTTCGTaGAAGCGGCCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWAVPS*KRPGWW
Trigger: CCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVHPGR*AVPSWK
Trigger: CTTCCACGAAGGCACTGCCCAACGGCCGGGATGCAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVHPGR*AVPSWK
Trigger: CTTCCACGAAGGCACTGCCCAACGGCCGGGATGCAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVHPGR*AVPSWK
Trigger: CTTCCACGAAGGCACTGCCCAACGGCCGGGATGCAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCAGGCGGACGCCATaGTCCCTGACAATAAGGTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSRRTP*SLTIRS
Trigger: GGACCTTATTGTCAGGGACCATGGCGTCCGCCTGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCGGACGCCATaGTCCCTGACAATAAGGTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSRRTP*SLTIRS
Trigger: GGACCTTATTGTCAGGGACCATGGCGTCCGCCTGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCCTTATCTGTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASLICE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCACAGATAAGGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPSKQS*PFRSCS
Trigger: GGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCCCAGTGCCAGCCTaGGCCTCCAGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCPVPA*ASSKAT
Trigger: TGTGGCCTTGCTGGAGGCCCAGGCTGGCACTGGGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGTCCACAGTCAGCCTaGCGCTGGTGGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRPQSA*RWWQGR
Trigger: TCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGGCTCCTGGGTGCTaGGGTCATGGTAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALAPGC*GHGRLW
Trigger: CCAGAGTCTACCATGACCCCAGCACCCAGGAGCCAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGGCTGTAGGTGACTaGCTCCTGGGTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLAVGD*LLGAGV
Trigger: GACCCCAGCACCCAGGAGCCAGTCACCTACAGCCAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCAAGCCGGTCAGCTaGTCAGACCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLKPVS*SDRHRC
Trigger: ACAGCGGTGCCGGTCTGACCAGCTGACCGGCTTGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCAAGCCGGTCAGCTaGTCAGACCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLKPVS*SDRHRC
Trigger: ACAGCGGTGCCGGTCTGACCAGCTGACCGGCTTGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGAGGCCCCGGCGCATaGCCTCATAGATGGTTACTT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGGPGA*PHRWLL
Trigger: AAGTAACCATCTATGAGGCCATGCGCCGGGGCCTCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCACAGGCAGGCGGTaGCTGTGCACCGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSTGRR*LCTGSM
Trigger: CATCGACCCGGTGCACAGCCACCGCCTGCCTGTGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATGGAGGAGCCACCGTaGCTGCCACCACCCGGGATG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRMEEPP*LPPPGM
Trigger: CATCCCGGGTGGTGGCAGCCACGGTGGCTCCTCCAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGAGGCCAGGTTCTGCTaGCGGATGATCTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWEARFC*RMISVF
Trigger: GAAGACCGAGATCATCCGCCAGCAGAACCTGGCCTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGAGGCCAGGTTCTGCTaGCGGATGATCTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQEARFC*RMISVF
Trigger: GAAGACCGAGATCATCCGCCAGCAGAACCTGGCCTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGTTAGCGTCTGCCTaGAGCCAGGCAGGTAGACAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWLASA*SQAGRH
Trigger: GTGTCTACCTGCCTGGCTCCAGGCAGACGCTAACCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGTTAGCGTCTGCCTaGAGCCAGGCAGGTAGACAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWLASA*SQAGRH
Trigger: GTGTCTACCTGCCTGGCTCCAGGCAGACGCTAACCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGGGCTCCGACAGCTaGTCGTGCGTGTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLGSDS*SCVSLL
Trigger: CAATAAGGACACGCACGACCAGCTGTCGGAGCCCAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTGGGCTCCGACAGCTaGTCGTGCGTGTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLGSDS*SCVSLL
Trigger: CAATAAGGACACGCACGACCAGCTGTCGGAGCCCAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCAGCAGCAGCATCTaGCCGCTGGGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSSSI*PLGSSR
Trigger: CCGTGATGACCCCAGCGGCCAGATGCTGCTGCTGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCAGCAGCAGCATCTaGCCGCTGGGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSSSI*PLGSSR
Trigger: CCGTGATGACCCCAGCGGCCAGATGCTGCTGCTGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCAGCAGCAGCATCTaGCCGCTGGGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSSSI*PLGSSR
Trigger: CCGTGATGACCCCAGCGGCCAGATGCTGCTGCTGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGAGCCGTTCCTTGGTaGCATCAACAAAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRAVPW*HQQRLR
Trigger: CCGGAGTCTTTGTTGATGCCACCAAGGAACGGCTCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGAGCCGTTCCTTGGTaGCATCAACAAAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRAVPW*HQQRLR
Trigger: CCGGAGTCTTTGTTGATGCCACCAAGGAACGGCTCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCGAGAGCCGTTCCTTaGTGGCATCAACAAAGACTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPRAVP*WHQQRL
Trigger: GAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGAGAGCCGTTCCTTaGTGGCATCAACAAAGACTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPRAVP*WHQQRL
Trigger: GAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGACACAGGCCCGTCTaGGGGTCAGTGATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRHRPV*GSVMQR
Trigger: GCGCTGCATCACTGACCCCCAGACGGGCCTGTGTCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCCTTGCCCGTCTCTaGGTCCACAATCACCACGCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALLARL*VHNHHA
Trigger: CGCGTGGTGATTGTGGACCCAGAGACGGGCAAGGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSMSY*RPERRS
Trigger: CGACCGCCGCTCTGGTCGCCAGTATGACATCGACGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGACCAGGAGGCTAGCTaGGTCCTGGGGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSDQEAS*VLGPAE
Trigger: TTCTGCTGGCCCCAGGACCCAGCTAGCCTCCTGGTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGACCAGGAGGCTAGCTaGGTCCTGGGGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKDQEAS*VLGPAE
Trigger: TTCTGCTGGCCCCAGGACCCAGCTAGCCTCCTGGTC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGACCAGGAGGCTAGCTaGGTCCTGGGGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVDQEAS*VLGPAE
Trigger: TTCTGCTGGCCCCAGGACCCAGCTAGCCTCCTGGTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCTCCAGCAGCCGCTaGCCGGTGATGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVASSSR*PVMLST
Trigger: GGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTCCAGCAGCCGCTaGCCGGTGATGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASSSR*PVMLST
Trigger: GGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCTCCAGCAGCCGCTaGCCGGTGATGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASSSR*PVMLST
Trigger: GGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPQKAF*ARLIRS
Trigger: AGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTTGGTCTTGGTGCGTaGGTCCTCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLGLGA*VLKPTE
Trigger: TTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTTGGTCTTGGTGCGTaGGTCCTCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLGLGA*VLKPTE
Trigger: TTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGACATCTTGGTCTTaGTGCGTGGGTCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLTSWS*CVGPQT
Trigger: GGTTTGAGGACCCACGCACCAAGACCAAGATGTCAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTGACATCTTGGTCTTaGTGCGTGGGTCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLTSWS*CVGPQT
Trigger: GGTTTGAGGACCCACGCACCAAGACCAAGATGTCAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGGCAGCTGACATCTTaGTCTTGGTGCGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGQLTS*SWCVGP
Trigger: AGGACCCACGCACCAAGACCAAGATGTCAGCTGCCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACATCACGCAGCTTCTaGGCTGTGCGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTSRSF*AVRAST
Trigger: TGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACATCACGCAGCTTCTaGGCTGTGCGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTSRSF*AVRAST
Trigger: TGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGTAGTAGCCCTTGCTaGACTGTGCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCSSPC*TVPQPP
Trigger: TGGAGGCTGCGGCACAGTCCAGCAAGGGCTACTACA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGTAGTAGCCCTTGCTaGACTGTGCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCSSPC*TVPQPP
Trigger: TGGAGGCTGCGGCACAGTCCAGCAAGGGCTACTACA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGAAGCCAGAGCCAGTaGCATCAAAGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRSQSQ*HQSCHA
Trigger: GGCGTGGCAGCTTTGATGCCACTGGCTCTGGCTTCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGAAGCCAGAGCCAGTaGCATCAAAGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRSQSQ*HQSCHA
Trigger: GGCGTGGCAGCTTTGATGCCACTGGCTCTGGCTTCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGAGCTGATCTCGTGCTaGATGGCTCTTGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQELISC*MALEGS
Trigger: GGACCCCTCAAGAGCCATCCAGCACGAGATCAGCTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071869.12
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGTTCGTCGGGTGGTaGGCCAGACGTCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALFVGW*ARRQQM
Trigger: CATCTGCTGACGTCTGGCCCACCACCCGACGAACAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074834.12
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTCCGGACCTGGTCTaGCCAGGGTCCCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAPDLV*PGSPRW
Trigger: CCACCGTGGGGACCCTGGCCAGACCAGGTCCGGAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGTCTCGTTCATCTGTaGCTGGGGCAGGCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGLVHL*LGQAPD
Trigger: GTCCGGAGCCTGCCCCAGCCACAGATGAACGAGACC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCCCTCGGAGGCTCTaGGCACAGCCAGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCPRRL*AQPGRG
Trigger: ACCTCTACCTGGCTGTGCTCAGAGCCTCCGAGGGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023226.13
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCACCTGAATGTCTaGGATCTGGAAGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAHLNV*DLEVQD
Trigger: ATCCTGCACTTCCAGATCTCAGACATTCAGGTGAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTCACCTGAATGTCTaGGATCTGGAAGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAHLNV*DLEVQD
Trigger: ATCCTGCACTTCCAGATCTCAGACATTCAGGTGAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLYHTL*PQQQLL
Trigger: GAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLYHTL*PQQQLL
Trigger: GAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACTTTTCATCAGGCTaGGGGACGTCCACATCTTCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDDFSSG*GTSTSS
Trigger: AGAAGATGTGGACGTCCCTCAGCCTGATGAAAAGTC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGACTTTTCATCAGGCTaGGGGACGTCCACATCTTCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMDFSSG*GTSTSS
Trigger: AGAAGATGTGGACGTCCCTCAGCCTGATGAAAAGTC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCCAGGGGGAATCTTaGGCTGGCCCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSQGES*AGPLVL
Trigger: CAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGTCTGCACATCATTaGACAACAGCCGGATCATAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGSAHH*TTAGSY
Trigger: GTATGATCCGGCTGTTGTTCAATGATGTGCAGACCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGGTCTGCACATCATTaGACAACAGCCGGATCATAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGSAHH*TTAGSY
Trigger: GTATGATCCGGCTGTTGTTCAATGATGTGCAGACCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAATTCCTCTATAGACTaGTGCATGCCTCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDNSSID*CMPRWL
Trigger: CAGCCACCGAGGCATGCATCAGTCTATAGAGGAATT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAATTCCTCTATAGACTaGTGCATGCCTCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMNSSID*CMPRWL
Trigger: CAGCCACCGAGGCATGCATCAGTCTATAGAGGAATT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCCTCCCGAACATCTaGGAAGAACTGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRLPNI*EELEVG
Trigger: GCCTACTTCCAGTTCTTCTCAGATGTTCGGGAGGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRCWNH*APSSGM
Trigger: CATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRCWNH*APSSGM
Trigger: CATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGTGTGACCAGGGCCTaGTGCTGCGCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSVTRA*CCASSL
Trigger: TAGACTGGAGGCGCAGCATCAGGCCCTGGTCACACT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCACGGGTTCAAGCTaGGCCTTGTACGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAATGSS*ALYVIS
Trigger: GCTGATCACGTACAAGGCTCAGCTTGAACCCGTGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGTTCAGCTTCCTCCTaGGCCTGCCGCTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRSASS*ACRFCA
Trigger: AGCGCAGAAGCGGCAGGCTCAGGAGGAAGCTGAACG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCGTGTGGCCTCACTaGTGGCAGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAVWPH*WQPASQ
Trigger: CTGAGAAGCTGGCTGCCATCAGTGAGGCCACACGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMFCSC*SVCCSS
Trigger: GGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQMFCSC*SVCCSS
Trigger: GGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTTCAATGCGAGCCTTaGGCTTGCCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALQCEP*ACPAPP
Trigger: TGGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCATCTCCTCCGACTTaGGCTGCAGTAACTTCGCCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQASPPT*AAVTSP
Trigger: AGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCATCTCCTCCGACTTaGGCTGCAGTAACTTCGCCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASPPT*AAVTSP
Trigger: AGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPSPAR*SARAAA
Trigger: TGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTTCACAGCCTCATTaGCTGTCAGCCGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPSQPH*LSAADS
Trigger: GGAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGACGGCACGCTCAGCTaGCAGCAGTTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVDGTLS*QQFVVQ
Trigger: CTGCACCACAAACTGCTGTCAGCTGAGCGTGCCGTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGTCCTTGTAGCCGGTaGCGGCACGCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGPCSR*RHAQLT
Trigger: TGTCAGCTGAGCGTGCCGTCACCGGCTACAAGGACC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGCAGCCTTATCTGTaGGTGGCAGGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWQPYL*VAGGAG
Trigger: GCCTGCGCCTCCTGCCACTCACAGATAAGGCTGCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAAACTGAGCTCTGCTaGGGATCTTGGCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQTELC*GSWRPG
Trigger: TCCTGGACGCCAAGATCCTCAGCAGAGCTCAGTTTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCAAACTGAGCTCTGCTaGGGATCTTGGCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQQTELC*GSWRPG
Trigger: TCCTGGACGCCAAGATCCTCAGCAGAGCTCAGTTTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGACAGCTCTTTGACTaGTGTCTTGCCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGQLFD*CLAILE
Trigger: CTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGACAGCTCTTTGACTaGTGTCTTGCCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGQLFD*CLAILE
Trigger: CTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCACTACGCCCGCCTTaGCAGCCTCATGGACATACA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPLRPP*QPHGHT
Trigger: TGTATGTCCATGAGGCTGTCAAGGCGGGCGTAGTGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTCCGGGATCATGTTTaGCTGCATCACCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLRDHV*LHHLPQ
Trigger: CTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCCGGGATCATGTTTaGCTGCATCACCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLRDHV*LHHLPQ
Trigger: CTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPESQP*AGHADP
Trigger: AGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPESQP*AGHADP
Trigger: AGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPESQP*AGHADP
Trigger: AGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTTACCCTCCCAGCCTaGAAGTCAGCCATGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVTLPA*KSAMSR
Trigger: CCGGCTCATGGCTGACTTTCAGGCTGGGAGGGTAAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTTACCCTCCCAGCCTaGAAGTCAGCCATGAGCCGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVTLPA*KSAMSR
Trigger: CCGGCTCATGGCTGACTTTCAGGCTGGGAGGGTAAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTTACCCTCCCAGCCTaGAAGTCAGCCATGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVTLPA*KSAMSR
Trigger: CCGGCTCATGGCTGACTTTCAGGCTGGGAGGGTAAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCAGCTCCTCCACAGTaGTCTGCTTGCGGAGACCGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPAPPQ*SACGDR
Trigger: GCGGTCTCCGCAAGCAGATCACTGTGGAGGAGCTGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTCGTCCATGACTTaGGAGCGTACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASSMT*ERTSSS
Trigger: GGAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAALAH*GLGGCL
Trigger: AAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAALAH*GLGGCL
Trigger: AAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAALAH*GLGGCL
Trigger: AAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATSGGQ*DPCGRP
Trigger: AGGCCTACCGCAAGGGTCTCATTGACCACCAGACGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCACCGGCATTGCCTaGGAGCATGTCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAATGIA*EHVSKL
Trigger: GAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACAGTGCTGGGGTCAATaGTGCCCCCGGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRQCWGQ*CPRCRL
Trigger: AAGCCTGCACCGGGGGCATCATTGACCCCAGCACTG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGTCTTGGGGCACGTaGGGTACTTGGAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWSWGT*GTWSKH
Trigger: GTGCTTACTCCAAGTACCTCACGTGCCCCAAGACCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGTCTTGGGGCACGTaGGGTACTTGGAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWSWGT*GTWSKH
Trigger: GTGCTTACTCCAAGTACCTCACGTGCCCCAAGACCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTTGTAGGAGATCTTaGGCTTGGTCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPCRRS*AWSWGT
Trigger: CGTGCCCCAAGACCAAGCTCAAGATCTCCTACAAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTTGTAGGAGATCTTaGGCTTGGTCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPCRRS*AWSWGT
Trigger: CGTGCCCCAAGACCAAGCTCAAGATCTCCTACAAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCGGCGGCCATAGCCTaGGGAAGAGTAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAAAIA*GRVGGR
Trigger: TCTTCCTCCTACTCTTCCTCAGGCTATGGCCGCCGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCACTGATGTGCCTCTaGGCCTCTGCCCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSLMCL*ASALQC
Trigger: GCACTGGAGGGCAGAGGCTCAGAGGCACATCAGTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTCGTAGGCCTGGATaGAATCCTGTTCGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPRRPG*NPVRRV
Trigger: CACCCGACGAACAGGATTTCATCCAGGCCTACGAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074834.12
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCCAGGTCCCGCTCTaGCACCGAGAATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSQVPL*HRECLV
Trigger: GACCAGGCATTCTCGGTGGCAGAGCGGGACCTGGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCTCCCGGTACTCCTaGCAACGAAGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSRYS*QRSCSS
Trigger: TGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCTGGAGGGGAACTTaGGCTCCTCAAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASWRGT*APQKQR
Trigger: CCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGGCCCGCTTGTACTaGCCCCTCCAAAGACTGGTA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALARLY*PLQRLV
Trigger: TACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGCCACATGCAGCTTaGCCCACTCCTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWPHAA*PTPSPH
Trigger: ATGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCAGGATGGCCACATaGAGCTTGCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASRMAT*SLPHSF
Trigger: GAAGGAGTGGGGCAAGCTGCATGTGGCCATCCTGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAACTCGCTTCGCAGTTaGTTCTCCCGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQNSLRS*FSRSRM
Trigger: CATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTACCAGGCGCTCATaGAGACGATACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSATRRS*RRYTLR
Trigger: CCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTACCAGGCGCTCATaGAGACGATACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKATRRS*RRYTLR
Trigger: CCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTACCAGGCGCTCATaGAGACGATACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVATRRS*RRYTLR
Trigger: CCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGGCTQ*GWLPGA
Trigger: AGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGGGGCACCCACTCCTaGCTTCAGCCGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRGTHS*LQPEVV
Trigger: TACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGGGGCACCCACTCCTaGCTTCAGCCGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRGTHS*LQPEVV
Trigger: TACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCCTCTGTGTACTCTaGAGGGTCACCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARLCVL*RVTWVT
Trigger: TGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACAGCTCCACTGTGTCTaGAAGGCAGCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAQLHCV*KAAWKD
Trigger: GTCCTTCCAGGCTGCCTTGCAGACACAGTGGAGCTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVSCSF*NCSSAS
Trigger: GGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWVSCSF*NCSSAS
Trigger: GGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGAC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCATCCTGGGCATCCTaGAGCAGATCCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSWAS*SRSSSL
Trigger: CAGGCTCGAGGATCTGCTGCAGGATGCCCAGGATGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCAGGCCTGAGAGGTaGCCCTTGTACTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQARPER*PLYSFS
Trigger: ACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCAGGCCTGAGAGGTaGCCCTTGTACTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWARPER*PLYSFS
Trigger: ACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCGGGTGGGCAGGGTTaGGTGGCTTCAACTGCACAA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPGGQG*VASTAQ
Trigger: TTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCGGGTGGGCAGGGTTaGGTGGCTTCAACTGCACAA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPGGQG*VASTAQ
Trigger: TTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCATTGGTCACCCTTGTaGACAGTCACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWHWSPL*TVTSTC
Trigger: GCAGGTGGAGGTGACTGTGCACAAGGGTGACCAATG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCATTGGTCACCCTTGTaGACAGTCACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQHWSPL*TVTSTC
Trigger: GCAGGTGGAGGTGACTGTGCACAAGGGTGACCAATG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCCGACTGAGGCTCTaGCACGCCAGAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSRLRL*HARRLF
Trigger: GAAGAGCCTTCTGGCGTGGCAGAGCCTCAGTCGGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCCGACTGAGGCTCTaGCACGCCAGAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSRLRL*HARRLF
Trigger: GAAGAGCCTTCTGGCGTGGCAGAGCCTCAGTCGGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCCGACTGAGGCTCTaGCACGCCAGAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSRLRL*HARRLF
Trigger: GAAGAGCCTTCTGGCGTGGCAGAGCCTCAGTCGGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGSRRR*TVRVSQ
Trigger: CTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSVAQR*AGRTPV
Trigger: CACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTGCGCTTTCTGTTaGTCAGCGATGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRACAFC*SAMRWA
Trigger: CGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCCTCCACCTCAGCCTaGGCTTTCTGTTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPSTSA*AFCCSA
Trigger: CGCTGAGCAACAGAAAGCGCAGGCTGAGGTGGAGGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCCTCCACCTCAGCCTaGGCTTTCTGTTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPSTSA*AFCCSA
Trigger: CGCTGAGCAACAGAAAGCGCAGGCTGAGGTGGAGGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGACCTGTTCCAGCTTaGCCAGGGTCAGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGPVPA*PGSVPT
Trigger: AGTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGACCTGTTCCAGCTTaGCCAGGGTCAGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGPVPA*PGSVPT
Trigger: AGTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTGTTGAATACTGGCTaGTGTGCCTCGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVLNTG*CASAWA
Trigger: GGCCCAGGCCGAGGCACAGCAGCCAGTATTCAACAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTGTTGAATACTGGCTaGTGTGCCTCGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVLNTG*CASAWA
Trigger: GGCCCAGGCCGAGGCACAGCAGCCAGTATTCAACAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCACCAACCTCCTGTaGCCCCCGCAACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALTNLL*PPQLIS
Trigger: AGAGATGAGTTGCGGGGGGCACAGGAGGTTGGTGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTGGATCTGCTCTTaGCGCCTCTTGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAWICS*RLLASC
Trigger: GCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTCGCTGTAGCGCGTaGGCAGATCCACGTACTCCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKARCSA*ADPRTP
Trigger: AGGAGTACGTGGATCTGCGCACGCGCTACAGCGAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTCGCTGTAGCGCGTaGGCAGATCCACGTACTCCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSARCSA*ADPRTP
Trigger: AGGAGTACGTGGATCTGCGCACGCGCTACAGCGAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSASCR*FSSAAS
Trigger: GGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGTGCCTCAGCTAGCTaGCGCTGCTTCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCASAS*RCFSSA
Trigger: TGCGCTGGAGAAGCAGCGGCAGCTAGCTGAGGCACA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGTGCCTCAGCTAGCTaGCGCTGCTTCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCASAS*RCFSSA
Trigger: TGCGCTGGAGAAGCAGCGGCAGCTAGCTGAGGCACA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATGCTGCGCTTCTGCTaGTGTGCGTCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKMLRFC*CASTAA
Trigger: GGCAGCAGTGGACGCACAGCAGCAGAAGCGCAGCAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTTGGCCTGGATCTCTaGCTCCGAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLGLDL*LRALPQ
Trigger: CTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTGCAGCCTCCACCTaGTGGGCCTTGGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSAAST*WALAWI
Trigger: GATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCGCTTCTGCGCTTCTaGCTCCTCAGCCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPLLRF*LLSPSA
Trigger: CGCGCTCGGGCTGAGGAGGCAGAAGCGCAGAAGCGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCTCATCCTGCACCTaGCTTCGCAAGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLSSCT*LRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTCTCATCCTGCACCTaGCTTCGCAAGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLSSCT*LRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCGGCCTCCTCGGCCTaGAGTCTCAGCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSASSA*SLSSSR
Trigger: CCTGGATGAGCTGAGACTGCAGGCCGAGGAGGCCGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCAGCCGCAGCCGCAGTaGTTCATTGGCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKQPQPQ*FIGLQL
Trigger: CAGCTGAAGGCCAATGAAGCACTGCGGCTGCGGCTG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAGCCGCAGCCGCAGTaGTTCATTGGCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQPQPQ*FIGLQL
Trigger: CAGCTGAAGGCCAATGAAGCACTGCGGCTGCGGCTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAGCCGCAGCCGCAGTaGTTCATTGGCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQPQPQ*FIGLQL
Trigger: CAGCTGAAGGCCAATGAAGCACTGCGGCTGCGGCTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLGIGL*QALLLC
Trigger: GCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCAGCTGCCGCTGCTaGTCACCTTGCTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSCRC*SPCSVS
Trigger: CGAGACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCAGCTGCCGCTGCTaGTCACCTTGCTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSCRC*SPCSVS
Trigger: CGAGACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCAGCAGCTGCCGCTaGTGCTCACCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSSCR*CSPCSV
Trigger: GACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCTGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCAGCAGCTGCCGCTaGTGCTCACCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSSCR*CSPCSV
Trigger: GACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCTGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSANCL*LLASSA
Trigger: GGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCGGCATCCTCCTCTaGCAACTGCCTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGGILL*QLPLPL
Trigger: AAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGCGGCATCCTCCTCTaGCAACTGCCTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGGILL*QLPLPL
Trigger: AAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTTGAGTGCAATCTCTaGCTCCGTCTTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMFECNL*LRLEPC
Trigger: ACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLCSAA*SSRRRR
Trigger: GCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSMSAL*SAACSS
Trigger: GGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSMSAL*SAACSS
Trigger: GGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTGTGTCCTCCGCGTTaGTGCGAATGCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLCPPR*CECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTGTGTCCTCCGCGTTaGTGCGAATGCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLCPPR*CECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTGTGTCCTCCGCGTTaGTGCGAATGCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLCPPR*CECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVPPAP*CALCPP
Trigger: CGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVPPAP*CALCPP
Trigger: CGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCTCCAGTTCCGCCTaGTCCTTGCTGCGCATTGTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASSSA*SLLRIV
Trigger: CACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTCCAGTTCCGCCTaGTCCTTGCTGCGCATTGTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASSSA*SLLRIV
Trigger: CACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTCTGCTCCTCCTCTaGCGCCAACTGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPLLLL*RQLPLP
Trigger: CGGCAGCGGCAGTTGGCGGCAGAGGAGGAGCAGAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAFSSA*SRFWAA
Trigger: GGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTTGCGCAGCTTCTCTaGGGCCGCCTGCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLAQLL*GRLRLS
Trigger: GCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLLFQR*LLCLGP
Trigger: CGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCATCTCCGCGTCGGCTaGCTGCTTCTGTTTCAGCGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSHLRVG*LLLFQR
Trigger: GCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGTGTGGTCAGCTCCTaGTCTACCTGGGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASVVSS*STWAFC
Trigger: GCAGAAGGCCCAGGTAGAGCAGGAGCTGACCACACT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCAGTCTCCTCTAGCTaGAGCCTCAGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSVSSS*SLSVVS
Trigger: GCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCAGTCTCCTCTAGCTaGAGCCTCAGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSVSSS*SLSVVS
Trigger: GCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSTWLR*RAASVT
Trigger: GGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTTCCTGCACCGCCTaGATCTTCTCCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASCTA*IFSFSI
Trigger: GATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTTCCTGCACCGCCTaGATCTTCTCCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQASCTA*IFSFSI
Trigger: GATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSFCC*SSSASA
Trigger: GGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVASSFC*CSSSAS
Trigger: CGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASSFC*CSSSAS
Trigger: CGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGGCAAGCTCCTTCTaGTGCTGCAGCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWASSF*CCSSSA
Trigger: GGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGGCAAGCTCCTTCTaGTGCTGCAGCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWASSF*CCSSSA
Trigger: GGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGATCTCCAGCGTCTaGACCAACGTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWISSV*TNVTFS
Trigger: GGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGAGAGGAAGCTCTTCTaGAGGGCCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSERKLF*RAWVSC
Trigger: GCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSLAFS*SMKRSR
Trigger: GCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSLAFS*SMKRSR
Trigger: GCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCACGCAGCTGCTTTaGTTTAGCCACCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLTQLL*FSHLVL
Trigger: CAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCTCCTCACGCAGCTaGTTTGCTTTAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCSSRS*FALATS
Trigger: CGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCTCCTCACGCAGCTaGTTTGCTTTAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCSSRS*FALATS
Trigger: CGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTGTTCCATCTGCTaGTGCTGCCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSCSIC*CCRCCS
Trigger: GGAGCAGCAGCGGCAGCAGCAGCAGATGGAACAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTTTCCTGTTCCATCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQFSCSI*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGATGGAACAGGAAAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTTTCCTGTTCCATCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWFSCSI*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGATGGAACAGGAAAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTGGCCTCCTCCATaGTGGCCATCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSWPPP*WPSAPA
Trigger: AGCAGGAGCTGATGGCCAGCATGGAGGAGGCCAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCAGTTCCTCTTGCTTaGGCCTCACGCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAVPLA*ASRPPQ
Trigger: CTGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCAGTTCCTCTTGCTTaGGCCTCACGCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAVPLA*ASRPPQ
Trigger: CTGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGCTGCTGCTCCAGATaGTGCAGTTCCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRCCSR*CSSSCL
Trigger: CAAGCAAGAGGAACTGCAGCATCTGGAGCAGCAGCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCTGCTGCCGCTGCTaGTCCAGATGCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCCCRC*SRCCSS
Trigger: GGAACTGCAGCATCTGGAGCAGCAGCGGCAGCAGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCTGCTGCCGCTGCTaGTCCAGATGCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCCCRC*SRCCSS
Trigger: GGAACTGCAGCATCTGGAGCAGCAGCGGCAGCAGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCCTGTGCCAAACGCTaGAGTTCCTCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPCAKR*SSSWLR
Trigger: CCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATACACATCTTCCCGCTaGGTGAGCTCAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAYTSSR*VSSATV
Trigger: CACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCTGCCCTGGAACTTaGCAAACGGTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASCPGT*QTVQTR
Trigger: CCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGGCCCGTGCGGAACTaGTGCAGCAGGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVWPVRN*CSRSRR
Trigger: GCGACGGGACCTGCTGCAGCAGTTCCGCACGGGCCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACTGTCCAGCAGCTCTaGGGCGGGCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTVQQL*GGHEGT
Trigger: CGTGCCCTCGTGCCCGCCGCAGAGCTGCTGGACAGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCAGGGTCGATGATATaGCCAGTGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAGSMI*PVPAWA
Trigger: GGCCCAGGCTGGCACTGGGCATATCATCGACCCTGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCCGCAGCAACTCCTaGCGCTGCTCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACRSNS*RCSSVK
Trigger: CTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVKDSLS*RRVSTS
Trigger: GGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKKDSLS*RRVSTS
Trigger: GGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGGCAGCCGCTGCCCTaGAGCAGAGTCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRQPLP*SRVRTE
Trigger: CTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGGATCATGTTTGACTaGATCACCTCCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGIMFD*ITSHRD
Trigger: GTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGATCATGTTTGACTaGATCACCTCCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGIMFD*ITSHRD
Trigger: GTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTCCTGTGGCTAGCTaGGCATCCAGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPPVAS*ASSSLS
Trigger: GCTGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCGGAAGGTCAGCTTaGGGGCATCAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRGRSA*GHQRAA
Trigger: TGCTGCTCTCTGATGCCCGCAAGCTGACCTTCCGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGCGGAAGGTCAGCTTaGGGGCATCAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRGRSA*GHQRAA
Trigger: TGCTGCTCTCTGATGCCCGCAAGCTGACCTTCCGCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCTCCACAGTGATCTaGTTGCGGAGACCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSTVI*LRRPRK
Trigger: CTTCCGCGGTCTCCGCAAGCAGATCACTGTGGAGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGACATAGCCGGTGGCTaGCTGTGCTTCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSDIAGG*LCFQEL
Trigger: GAGCTCCTGGAAGCACAGGCAGCCACCGGCTATGTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGACATAGCCGGTGGCTaGCTGTGCTTCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKDIAGG*LCFQEL
Trigger: GAGCTCCTGGAAGCACAGGCAGCCACCGGCTATGTC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGACATAGCCGGTGGCTaGCTGTGCTTCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVDIAGG*LCFQEL
Trigger: GAGCTCCTGGAAGCACAGGCAGCCACCGGCTATGTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTCCAGCAGACGGATaGCATGGTCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPPADG*HGPSGS
Trigger: TGATCCTGAAGGACCATGGCATCCGTCTGCTGGAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTCCAGCAGACGGATaGCATGGTCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPPADG*HGPSGS
Trigger: TGATCCTGAAGGACCATGGCATCCGTCTGCTGGAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCACCACGCGGCGCTTaGGCACTGAGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSPRGA*ALRTWR
Trigger: CCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGAAGCCACCGGCATTaGCTGAGAGCATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGSHRH*LRACQQ
Trigger: TTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGAAGCCACCGGCATTaGCTGAGAGCATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGSHRH*LRACQQ
Trigger: TTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTCTGTGTCCAGGATaGCGGCCACGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSLCPG*RPRGQS
Trigger: AGACTGGCCCCGTGGCCGGCATCCTGGACACAGAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCACCGGTCAGGTACTaGACCTCCAGGAAACGCTGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPPVRY*TSRKRW
Trigger: CCAGCGTTTCCTGGAGGTGCAGTACCTGACCGGTGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCACAGTGCCACGTTaGAGAGCTTCGTCGAGAGAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSTVPR*RASSRD
Trigger: GTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCACAGTGCCACGTTaGAGAGCTTCGTCGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSTVPR*RASSRD
Trigger: GTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCGGGCATCCACAGTaGCACGTTGCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACGHPQ*HVAELR
Trigger: ACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCAGCTTCTGGGCTGTaGGGGCATCCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAASGL*GHPQCH
Trigger: GTGGCACTGTGGATGCCCGCACAGCCCAGAAGCTGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCCCTCCTCCACCATaGTACGGTCCAGAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCPPPP*YGPERP
Trigger: AGGACGCTCTGGACCGTAGCATGGTGGAGGAGGGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCCCTCCTCCACCATaGTACGGTCCAGAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCPPPP*YGPERP
Trigger: AGGACGCTCTGGACCGTAGCATGGTGGAGGAGGGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCTGTAGTAGCCCTTaGTGGACTGTGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGCSSP*WTVPQP
Trigger: AGGCTGCGGCACAGTCCAGCAAGGGCTACTACAGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGGCGGCGCACACGCTaGAGAGAGGCAGGTACAATC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGRRTR*REAGTI
Trigger: GATTGTACCTGCCTCTCTGCAGCGTGTGCGCCGCCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGGAGATGAGGTTGTaGCCATCACGGAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQREMRL*PSRRSS
Trigger: CGAAGACCTCCGTGATGGCCACAACCTCATCTCCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACATTCTGCAGCTTGTaGAAGCGCATCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTFCSL*KRILPF
Trigger: GAAAGGGAGGATGCGCTTCCACAAGCTGCAGAATGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACATTCTGCAGCTTGTaGAAGCGCATCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTFCSL*KRILPF
Trigger: GAAAGGGAGGATGCGCTTCCACAAGCTGCAGAATGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCCGAGGGTCAGCTTaGGGTTGCCGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGRGSA*GCRQQC
Trigger: ACATTGCTGACGGCAACCCCAAGCTGACCCTCGGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCACCGAGAATGCCTaGTCTAGGTTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWATENA*SRFSRL
Trigger: CAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAATCTCTTCAAAGCTaGAGGGGAACTTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMQSLQS*RGTCAP
Trigger: AGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCAATCTCTTCAAAGCTaGAGGGGAACTTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDQSLQS*RGTCAP
Trigger: AGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGTAGGGCGTCCGCCTaGTTCAGCTGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSRASA*FSCSSH
Trigger: GTGTGAGGAGCAGCTGAACCAGGCGGACGCCCTACT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCTQCG*LPGAHA
Trigger: TGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCTQCG*LPGAHA
Trigger: TGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCTGCAGGGTCACCTaGGTCACAGGGGCACCCACT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLCRVT*VTGAPT
Trigger: AGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAGSAV*SPLALG
Trigger: GCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAGSAV*SPLALG
Trigger: GCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTGGGP*RSSAAL
Trigger: CAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTGGGP*RSSAAL
Trigger: CAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCCACCAGCTGGCATTaGTCACCCTTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPTSWH*SPLCTV
Trigger: GACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTCCAGTGGGATGGCTaGGCAGGACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRFQWDG*AGPTSW
Trigger: CCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTGAGCACCTTCCAGTaGGATGGCTGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLSTFQ*DGWAGP
Trigger: GGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGVLIQ*QPQTVH
Trigger: GTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTPSAE*VQQVTA
Trigger: AGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAAGCTCTTGGAGAGTaGCAGGCACAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQALGE*QAQPGP
Trigger: AGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAAGCTCTTGGAGAGTaGCAGGCACAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQALGE*QAQPGP
Trigger: AGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCTGTGCCTCGGCCTaGGCCCGCAGCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCCASA*ARSFFS
Trigger: ACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCTGTGCCTCGGCCTaGGCCCGCAGCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCCASA*ARSFFS
Trigger: ACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTATTGGCACGGCCTaGATCTGCTCTTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAIGTA*ICSCRL
Trigger: GAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTATTGGCACGGCCTaGATCTGCTCTTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAIGTA*ICSCRL
Trigger: GAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATCCAGACTGAACCTTaGGCTTCTTGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQIQTEP*ASWQGR
Trigger: CCTCCCCTGCCAAGAAGCCCAAGGTTCAGTCTGGAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATCCAGACTGAACCTTaGGCTTCTTGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWIQTEP*ASWQGR
Trigger: CCTCCCCTGCCAAGAAGCCCAAGGTTCAGTCTGGAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASSSA*ALAWAC
Trigger: ACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCTGCAGCTCCTCTTaGATGCTGCGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACCSSS*MLRFCC
Trigger: GCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTGCCGTTTGCGCTaGCTCTCATCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRACRLR*LSSCTC
Trigger: GCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCGCAGTGCTTCATTaGCCTTCAGCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAAVLH*PSAASA
Trigger: AGCGCTGGCAGCTGAAGGCCAATGAAGCACTGCGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCGCAGTGCTTCATTaGCCTTCAGCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAAVLH*PSAASA
Trigger: AGCGCTGGCAGCTGAAGGCCAATGAAGCACTGCGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCGCAGTGCTTCATTaGCCTTCAGCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAAVLH*PSAASA
Trigger: AGCGCTGGCAGCTGAAGGCCAATGAAGCACTGCGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCTCCTGCTCTACCTaGGCCTTCTGCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSCST*AFCRSV
Trigger: GACACTCCGGCAGAAGGCCCAGGTAGAGCAGGAGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCTCCTGCTCTACCTaGGCCTTCTGCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSCST*AFCRSV
Trigger: GACACTCCGGCAGAAGGCCCAGGTAGAGCAGGAGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCTCCTCCTCTACCTaGCTGCGCTGCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSSST*LRCRAA
Trigger: GGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCCGGGCCTGCTCCTaGGCAAGCTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRRACS*ASSFCC
Trigger: GCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTCCAGAGTCCTCTaGAAACCCTGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASRVL*KPCVSS
Trigger: AGAGGAGACACAGGGTTTCCAGAGGACTCTGGAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASLCCR*ISSVCT
Trigger: GGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRRSAS*SLCCRW
Trigger: CCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRRSAS*SLCCRW
Trigger: CCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCTTCTGCAGGGCCTaGGTCTCCTGCAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALFCRA*VSCSIC
Trigger: GCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTAGCCACCTCGTCCTaGAAGAGCTGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLATSS*KSCSSL
Trigger: CAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWKRPG*WRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWKRPG*WRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKWKRPG*WRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGCTGCAGTTCCTCCTaGCTCAGGATGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRCSSS*LRMPAS
Trigger: GGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCTGCAGTTCCTCCTaGCTCAGGATGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRCSSS*LRMPAS
Trigger: GGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCACAGGCACACGGTaGCTGTGCACAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSTGTR*LCTGSM
Trigger: CATTGATCCTGTGCACAGCCACCGTGTGCCTGTGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCACAGGCACACGGTaGCTGTGCACAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSTGTR*LCTGSM
Trigger: CATTGATCCTGTGCACAGCCACCGTGTGCCTGTGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCCTTATCTGTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSLICE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCACAGATAAGGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCCTTATCTGTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSLICE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCACAGATAAGGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACGGTGCAGACACGGTaGCCTTTTCGAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTVQTR*PFRRRH
Trigger: GTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTCACGGTCCTGCCCTaGAACTTGCCAAACGGTGCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVTVLP*NLPNGA
Trigger: TGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPSKQS*PFRSCS
Trigger: GGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPSKQS*PFRSCS
Trigger: GGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPSKQS*PFRSCS
Trigger: GGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCCACAGCCACCTCTaGCTGCAGCAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGHSHL*LQQVFL
Trigger: AAGAAAGACTTGCTGCAGCCAGAGGTGGCTGTGGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCCACAGCCACCTCTaGCTGCAGCAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGHSHL*LQQVFL
Trigger: AAGAAAGACTTGCTGCAGCCAGAGGTGGCTGTGGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGGCTCCTGGGTGCTaGGGTCATGGTAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLAPGC*GHGRLW
Trigger: CCAGAGTCTACCATGACCCCAGCACCCAGGAGCCAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTGGCTCCTGGGTGCTaGGGTCATGGTAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLAPGC*GHGRLW
Trigger: CCAGAGTCTACCATGACCCCAGCACCCAGGAGCCAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCAAGCCGGTCAGCTaGTCAGACCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLKPVS*SDRHRC
Trigger: ACAGCGGTGCCGGTCTGACCAGCTGACCGGCTTGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGTCCAGGAGCTCACTaGCCGGCACAGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRPGAH*PAQGHG
Trigger: TCCGTGCCCCTGTGCCGGCCAGTGAGCTCCTGGACG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGAGGCCCCGGCGCATaGCCTCATAGATGGTTACTT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGGPGA*PHRWLL
Trigger: AAGTAACCATCTATGAGGCCATGCGCCGGGGCCTCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGACATACAGACGTTaGTTCCGCACAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWTYRR*FRTGST
Trigger: GGTGGACCCTGTGCGGAACCAACGTCTGTATGTCCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGACAGCAGCTTCTCATaGAGTTCAGGGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWDSSFS*SSGPTT
Trigger: CGTAGTGGGCCCTGAACTCCATGAGAAGCTGCTGTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGACAGCAGCTTCTCATaGAGTTCAGGGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQDSSFS*SSGPTT
Trigger: CGTAGTGGGCCCTGAACTCCATGAGAAGCTGCTGTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTGGAACAGCGAGATaGTGTTGCCCGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPGTAR*CCPSRD
Trigger: ATCCCTACTCGGGCAACACCATCTCGCTGTTCCAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTGGAACAGCGAGATaGTGTTGCCCGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPGTAR*CCPSRD
Trigger: ATCCCTACTCGGGCAACACCATCTCGCTGTTCCAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCCTTTTTCATGGCCTaGAACAGCGAGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPFFMA*NSEMVL
Trigger: CAACACCATCTCGCTGTTCCAGGCCATGAAAAAGGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCAGGCCCTTTTTCATaGCCTGGAACAGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPGPFS*PGTARW
Trigger: CCATCTCGCTGTTCCAGGCCATGAAAAAGGGCCTGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTTGGTGTCATCACTTaGATCTGCCAGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLGVIT*ICQHTV
Trigger: AACCGTGTGCTGGCAGATCCAAGTGATGACACCAAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTTGGTGTCATCACTTaGATCTGCCAGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLGVIT*ICQHTV
Trigger: AACCGTGTGCTGGCAGATCCAAGTGATGACACCAAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGTTAGCGTCTGCCTaGAGCCAGGCAGGTAGACAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWLASA*SQAGRH
Trigger: GTGTCTACCTGCCTGGCTCCAGGCAGACGCTAACCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGGGCTCCGACAGCTaGTCGTGCGTGTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALGSDS*SCVSLL
Trigger: CAATAAGGACACGCACGACCAGCTGTCGGAGCCCAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCAGCAGCAGCATCTaGCCGCTGGGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSSSI*PLGSSR
Trigger: CCGTGATGACCCCAGCGGCCAGATGCTGCTGCTGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCCTTCTTCATAGCCTaGTACACCGAGAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPFFIA*YTESRS
Trigger: GGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCCTTGCCCGTCTCTaGGTCCACAATCACCACGCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLLARL*VHNHHA
Trigger: CGCGTGGTGATTGTGGACCCAGAGACGGGCAAGGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCCTTGCCCGTCTCTaGGTCCACAATCACCACGCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLLARL*VHNHHA
Trigger: CGCGTGGTGATTGTGGACCCAGAGACGGGCAAGGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCAGGTACGTCTGGTaGTCAATGAGACCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSRYVW*SMRPLR
Trigger: CCGCAAGGGTCTCATTGACCACCAGACGTACCTGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAACTCCAGGTACGTCTaGTGGTCAATGAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDNSRYV*WSMRPL
Trigger: CAAGGGTCTCATTGACCACCAGACGTACCTGGAGTT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAACTCCAGGTACGTCTaGTGGTCAATGAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMNSRYV*WSMRPL
Trigger: CAAGGGTCTCATTGACCACCAGACGTACCTGGAGTT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSMSY*RPERRS
Trigger: CGACCGCCGCTCTGGTCGCCAGTATGACATCGACGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSMSY*RPERRS
Trigger: CGACCGCCGCTCTGGTCGCCAGTATGACATCGACGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSMSY*RPERRS
Trigger: CGACCGCCGCTCTGGTCGCCAGTATGACATCGACGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGACCAGGAGGCTAGCTaGGTCCTGGGGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRDQEAS*VLGPAE
Trigger: TTCTGCTGGCCCCAGGACCCAGCTAGCCTCCTGGTC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTCCAGCAGCCGCTaGCCGGTGATGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASSSR*PVMLST
Trigger: GGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGGCAGCTGACATCTTaGTCTTGGTGCGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGQLTS*SWCVGP
Trigger: AGGACCCACGCACCAAGACCAAGATGTCAGCTGCCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACATCACGCAGCTTCTaGGCTGTGCGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATSRSF*AVRAST
Trigger: TGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGTAGTAGCCCTTGCTaGACTGTGCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACSSPC*TVPQPP
Trigger: TGGAGGCTGCGGCACAGTCCAGCAAGGGCTACTACA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGAGCACCTCATAGATaGCCCGTAGCCGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRAPHR*PVAGPA
Trigger: CGCTGGACCGGCTACGGGCCATCTATGAGGTGCTCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGAGCACCTCATAGATaGCCCGTAGCCGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRAPHR*PVAGPA
Trigger: CGCTGGACCGGCTACGGGCCATCTATGAGGTGCTCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCAGGGTCCCCACGGTaGTGGCAGACACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPGSPR*WQTPQG
Trigger: CCCCTGTGGTGTCTGCCACCACCGTGGGGACCCTGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCACTGATGTGCCTCTaGGCCTTGATAAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSLMCL*ALIRCL
Trigger: CAAACACCTTATCAAGGCTCAGAGGCACATCAGTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000023226.13
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTTCCAGCAGGGAGATaGGGTTGTGGCCATCACGGA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLPAGR*GCGHHG
Trigger: TCCGTGATGGCCACAACCTCATCTCCCTGCTGGAAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTTCCAGCAGGGAGATaGGGTTGTGGCCATCACGGA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLPAGR*GCGHHG
Trigger: TCCGTGATGGCCACAACCTCATCTCCCTGCTGGAAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTTCCAGCAGGGAGATaGGGTTGTGGCCATCACGGA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLPAGR*GCGHHG
Trigger: TCCGTGATGGCCACAACCTCATCTCCCTGCTGGAAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGACTGTCCGCTCACCTaGATGTCTGAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWDCPLT*MSEIWK
Trigger: CTTCCAGATCTCAGACATTCAGGTGAGCGGACAGTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGACTGTCCGCTCACCTaGATGTCTGAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQDCPLT*MSEIWK
Trigger: CTTCCAGATCTCAGACATTCAGGTGAGCGGACAGTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALYHTL*PQQQLL
Trigger: GAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCCAGGGGGAATCTTaGGCTGGCCCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSQGES*AGPLVL
Trigger: CAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTGCTCACAATGCGCTaGAGACACTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLLTMR*RHSSLS
Trigger: TGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACTTCCCCAGCTCGCTaGGCCACCTTGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTSPAR*ATLPEA
Trigger: GGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCCTCCCGAACATCTaGGAAGAACTGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARLPNI*EELEVG
Trigger: GCCTACTTCCAGTTCTTCTCAGATGTTCGGGAGGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCGCTTGGCCAGGCCTaGGAGGTGCCCCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPLGQA*EVPLVL
Trigger: GAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRCWNH*APSSGM
Trigger: CATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGTGTGACCAGGGCCTaGTGCTGCGCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSVTRA*CCASSL
Trigger: TAGACTGGAGGCGCAGCATCAGGCCCTGGTCACACT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCACGGGTTCAAGCTaGGCCTTGTACGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVATGSS*ALYVIS
Trigger: GCTGATCACGTACAAGGCTCAGCTTGAACCCGTGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCACGGGTTCAAGCTaGGCCTTGTACGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSATGSS*ALYVIS
Trigger: GCTGATCACGTACAAGGCTCAGCTTGAACCCGTGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCTCCGATCCAGACTaGACCTTGGGCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALSDPD*TLGFLA
Trigger: TGCCAAGAAGCCCAAGGTTCAGTCTGGATCGGAGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAMFCSC*SVCCSS
Trigger: GGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTTCAATGCGAGCCTTaGGCTTGCCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLQCEP*ACPAPP
Trigger: TGGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCAGCCATGCGCAGCTTaGGGCGCTCGGCCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIQPCAA*GARPPR
Trigger: GCGCGGAGGCCGAGCGCCTCAAGCTGCGCATGGCTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSARA*ARLISA
Trigger: GGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTGGCGATCTCAGAGTaGGCCAAGGCAGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVAISE*AKAARC
Trigger: GCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGACGGCACGCTCAGCTaGCAGCAGTTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRDGTLS*QQFVVQ
Trigger: CTGCACCACAAACTGCTGTCAGCTGAGCGTGCCGTC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACAAACTGAGCTCTGCTaGGGATCTTGGCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAQTELC*GSWRPG
Trigger: TCCTGGACGCCAAGATCCTCAGCAGAGCTCAGTTTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCACTACGCCCGCCTTaGCAGCCTCATGGACATACA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPLRPP*QPHGHT
Trigger: TGTATGTCCATGAGGCTGTCAAGGCGGGCGTAGTGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCACTACGCCCGCCTTaGCAGCCTCATGGACATACA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPLRPP*QPHGHT
Trigger: TGTATGTCCATGAGGCTGTCAAGGCGGGCGTAGTGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCCGGGATCATGTTTaGCTGCATCACCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALRDHV*LHHLPQ
Trigger: CTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPESQP*AGHADP
Trigger: AGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTTACCCTCCCAGCCTaGAAGTCAGCCATGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVTLPA*KSAMSR
Trigger: CCGGCTCATGGCTGACTTTCAGGCTGGGAGGGTAAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACAGGTCTTCGGCAGTaGGGCGGCGGCGCACGTAGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTGLRQ*GGGARS
Trigger: ACTACGTGCGCCGCCGCCTCACTGCCGAAGACCTGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGTGCGTGTCCTTATTaGGGTAGCCGCGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARACPY*GSRVGK
Trigger: CTTACCAACGCGGCTACCTCAATAAGGACACGCACG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTCGTCCATGACTTaGGAGCGTACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASSMT*ERTSSS
Trigger: GGAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGTGGCCTCGTCCATaGCTTGAGAGCGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLWPRP*LESVPA
Trigger: AGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTGTGGCCTCGTCCATaGCTTGAGAGCGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLWPRP*LESVPA
Trigger: AGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTGTGGCCTCGTCCATaGCTTGAGAGCGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLWPRP*LESVPA
Trigger: AGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTSGGQ*DPCGRP
Trigger: AGGCCTACCGCAAGGGTCTCATTGACCACCAGACGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTSGGQ*DPCGRP
Trigger: AGGCCTACCGCAAGGGTCTCATTGACCACCAGACGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTSGGQ*DPCGRP
Trigger: AGGCCTACCGCAAGGGTCTCATTGACCACCAGACGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTTGACGACGCCATCTaGGGAGGAGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALDDAI*GGDGDL
Trigger: GAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVLVQC*AVNEVL
Trigger: AAGAACCTCATTGACCGCTCAGCACTGGACCAGTAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCACCGGCATTGCCTaGGAGCATGTCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSATGIA*EHVSKL
Trigger: GAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCACCGGCATTGCCTaGGAGCATGTCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKATGIA*EHVSKL
Trigger: GAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGGGGCCAGCAGAACTaGTGGGGTAGGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKWGQQN*WGRRKM
Trigger: CATCTTCCTCCTACCCCATCAGTTCTGCTGGCCCCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGGGCCAGCAGAACTaGTGGGGTAGGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWGQQN*WGRRKM
Trigger: CATCTTCCTCCTACCCCATCAGTTCTGCTGGCCCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGGGCCAGCAGAACTaGTGGGGTAGGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWGQQN*WGRRKM
Trigger: CATCTTCCTCCTACCCCATCAGTTCTGCTGGCCCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACTTGGAGTAAGCACTaGCATCACGCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTWSKH*HHAASG
Trigger: CCCAGAAGCTGCGTGATGTCAGTGCTTACTCCAAGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACTTGGAGTAAGCACTaGCATCACGCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTWSKH*HHAASG
Trigger: CCCAGAAGCTGCGTGATGTCAGTGCTTACTCCAAGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGTCTTGGGGCACGTaGGGTACTTGGAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWSWGT*GTWSKH
Trigger: GTGCTTACTCCAAGTACCTCACGTGCCCCAAGACCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTTGTAGGAGATCTTaGGCTTGGTCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPCRRS*AWSWGT
Trigger: CGTGCCCCAAGACCAAGCTCAAGATCTCCTACAAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCGGCGGCCATAGCCTaGGGAAGAGTAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAAAIA*GRVGGR
Trigger: TCTTCCTCCTACTCTTCCTCAGGCTATGGCCGCCGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATACGGCAGCCAGAGTaGCAACATGACCCACGACTA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQIRQPE*QHDPRL
Trigger: TAGTCGTGGGTCATGTTGTCACTCTGGCTGCCGTAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000054449.14
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGGTCAGCTTGGGGTTaGCGTCAGCAATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGSAWG*RQQCHH
Trigger: ATGATGACATTGCTGACGGCAACCCCAAGCTGACCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTCACTCCGTCCTGTaGACCAGGCACGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPHSVL*TRHAGH
Trigger: ATGCCCCGCGTGCCTGGTGCACAGGACGGAGTGAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCTCCCGGTACTCCTaGCAACGAAGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSRYS*QRSCSS
Trigger: TGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGTGCCGGATCCATTaGAGCAGCAGCAACACAAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWCRIH*SSSNTS
Trigger: GCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCTGGAGGGGAACTTaGGCTCCTCAAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSWRGT*APQKQR
Trigger: CCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTGGCCCGCTTGTACTaGCCCCTCCAAAGACTGGTA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLARLY*PLQRLV
Trigger: TACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGGCCCGCTTGTACTaGCCCCTCCAAAGACTGGTA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLARLY*PLQRLV
Trigger: TACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCAGGATGGCCACATaGAGCTTGCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSRMAT*SLPHSF
Trigger: GAAGGAGTGGGGCAAGCTGCATGTGGCCATCCTGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTAGCTTGCTCACAATaGGCTGAAGACACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVACSQ*AEDTPA
Trigger: GGCTGGAGTGTCTTCAGCGCATTGTGAGCAAGCTAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGTAGCTTGCTCACAATaGGCTGAAGACACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWVACSQ*AEDTPA
Trigger: GGCTGGAGTGTCTTCAGCGCATTGTGAGCAAGCTAC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCSPCG*RPSLRV
Trigger: GACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGGCTQ*GWLPGA
Trigger: AGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGGCTQ*GWLPGA
Trigger: AGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGGGGCACCCACTCCTaGCTTCAGCCGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRGTHS*LQPEVV
Trigger: TACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGCCTCTGTGTACTCTaGAGGGTCACCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRLCVL*RVTWVT
Trigger: TGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGCCTCTGTGTACTCTaGAGGGTCACCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRLCVL*RVTWVT
Trigger: TGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCCTCTGTGTACTCTaGAGGGTCACCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRLCVL*RVTWVT
Trigger: TGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCGCCACAAACCCGTaGAAGCTCTCCAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAATNP*KLSRDR
Trigger: CCGGTCCCTGGAGAGCTTGCACGGGTTTGTGGCGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAGCTCCACTGTGTCTaGAAGGCAGCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQLHCV*KAAWKD
Trigger: GTCCTTCCAGGCTGCCTTGCAGACACAGTGGAGCTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAGCTCCACTGTGTCTaGAAGGCAGCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQLHCV*KAAWKD
Trigger: GTCCTTCCAGGCTGCCTTGCAGACACAGTGGAGCTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATGCAGCAACACAGCTaGAGCATCCAGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQMQQHS*SIQLHC
Trigger: ACAGTGGAGCTGGATGCTGCAGCTGTGTTGCTGCAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGCAGCAACACAGCTaGAGCATCCAGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMQQHS*SIQLHC
Trigger: ACAGTGGAGCTGGATGCTGCAGCTGTGTTGCTGCAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCAAGTGTGCTTCAATaGAGCAACACAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSVLQ*SNTAAA
Trigger: TGCTGCAGCTGTGTTGCTGCATTGAAGCACACTTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVSCSF*NCSSAS
Trigger: GGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCATCCTGGGCATCCTaGAGCAGATCCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSWAS*SRSSSL
Trigger: CAGGCTCGAGGATCTGCTGCAGGATGCCCAGGATGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCGGGTGGGCAGGGTTaGGTGGCTTCAACTGCACAA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPGGQG*VASTAQ
Trigger: TTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACATTGGTCACCCTTGTaGACAGTCACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAHWSPL*TVTSTC
Trigger: GCAGGTGGAGGTGACTGTGCACAAGGGTGACCAATG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCCGACTGAGGCTCTaGCACGCCAGAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSRLRL*HARRLF
Trigger: GAAGAGCCTTCTGGCGTGGCAGAGCCTCAGTCGGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCTCCTGCTCACCCTaGTCCAGGCTTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSCSP*SRLCSN
Trigger: GTTACTACAAAGCCTGGAGCAGGGTGAGCAGGAGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCACAGGCCTCCAGCTaGAGCCGGATATCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSQASS*SRISLS
Trigger: GCTCAAGGATATCCGGCTGCAGCTGGAGGCCTGTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCACAGGCCTCCAGCTaGAGCCGGATATCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSQASS*SRISLS
Trigger: GCTCAAGGATATCCGGCTGCAGCTGGAGGCCTGTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCACAGGCCTCCAGCTaGAGCCGGATATCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSQASS*SRISLS
Trigger: GCTCAAGGATATCCGGCTGCAGCTGGAGGCCTGTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCCTCCACCTCAGCCTaGGCTTTCTGTTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPSTSA*AFCCSA
Trigger: CGCTGAGCAACAGAAAGCGCAGGCTGAGGTGGAGGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGAATACTGGCTGCTGTaGCTCGGCCTGGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVEYWLL*LGLGPQ
Trigger: CTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCACCAACCTCCTGTaGCCCCCGCAACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLTNLL*PPQLIS
Trigger: AGAGATGAGTTGCGGGGGGCACAGGAGGTTGGTGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCACCAACCTCCTGTaGCCCCCGCAACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLTNLL*PPQLIS
Trigger: AGAGATGAGTTGCGGGGGGCACAGGAGGTTGGTGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCACCAACCTCCTGTaGCCCCCGCAACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLTNLL*PPQLIS
Trigger: AGAGATGAGTTGCGGGGGGCACAGGAGGTTGGTGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTGGATCTGCTCTTaGCGCCTCTTGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAWICS*RLLASC
Trigger: GCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTCGCTGTAGCGCGTaGGCAGATCCACGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRARCSA*ADPRTP
Trigger: AGGAGTACGTGGATCTGCGCACGCGCTACAGCGAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCTCTGCCCGCTGTTaGTCAGCCAGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSARC*SASRSS
Trigger: GGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRATSS*MRRCSS
Trigger: AGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGATGCTGCGCTTCTaGTGCTGTGCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWMLRF*CCASTA
Trigger: AGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGATGCTGCGCTTCTaGTGCTGTGCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWMLRF*CCASTA
Trigger: AGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTCCTCTTGGATGCTaGGCTTCTGCTGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAPLGC*ASAAVR
Trigger: ACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTCCTCTTGGATGCTaGGCTTCTGCTGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAPLGC*ASAAVR
Trigger: ACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTTGGCCTGGATCTCTaGCTCCGAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLGLDL*LRALPQ
Trigger: CTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCATCCGGCTGCGTTCTaGAGCCTCCACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVHPAAF*SLHLLG
Trigger: GCCCAGCAGGTGGAGGCTGCAGAACGCAGCCGGATG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSAPPR*RSVVSS
Trigger: GCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCTCATCCTGCACCTaGCTTCGCAAGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALSSCT*LRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGQLCL*LPFALA
Trigger: AGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACGCAGGGCCAGCTCTaGCTCTGCCTGCCGTTTGCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTQGQL*LCLPFA
Trigger: CGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAPLPH*AVPSPG
Trigger: CCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGGCCACTGTTACATaGTCCTCCTGCAGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWATVT*SSCRVR
Trigger: GCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCAGCTTGCTGCTGTaGCCGTCGCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLSLLL*PSLGLL
Trigger: GAGGAGGCCGAGCGACGGGCACAGCAGCAAGCTGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCTCAGCCTCAGCTTaGTGCTGTGCCCGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRSASA*CCARRS
Trigger: CGAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCACCTCTTCTGCCTaGAGCCGCAGCCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVATSSA*SRSRSA
Trigger: AGCACTGCGGCTGCGGCTGCAGGCAGAAGAGGTGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGTGCCAGGCTCTTCTaGTGTGCCACCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCARLF*CATSSA
Trigger: GGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGTGCCAGGCTCTTCTaGTGTGCCACCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCARLF*CATSSA
Trigger: GGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGTGCCAGGCTCTTCTaGTGTGCCACCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCARLF*CATSSA
Trigger: GGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCGCTGCTGTGCGGTaGCCTCCGCCAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGAAVR*PPPAAA
Trigger: AGCGGCAGCTGGCGGAGGGCACCGCACAGCAGCGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRRISS*SAARRC
Trigger: GCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCTGCTGCTCACCTTaGTCTGTCTCGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRCCSP*SVSARR
Trigger: CCTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCAGCTGCCGCTGCTaGTCACCTTGCTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSCRC*SPCSVS
Trigger: CGAGACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCAGCAGCTGCCGCTaGTGCTCACCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSSCR*CSPCSV
Trigger: GACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCTGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCCTTCTCTTTGAGTaGAATCTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLLLFE*NLCLRL
Trigger: AAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSMSAL*SAACSS
Trigger: GGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRSLMP*AAGPGA
Trigger: AGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATCTCCTCCTCCACCTaGCGCCGCTGTCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVISSST*RRCRRV
Trigger: CACCCTGCGACAGCGGCGGCAGGTGGAGGAGGAGAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCGCGTTGCTGCGAATaGGCCCCAGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPRCCE*APAPAP
Trigger: TGGAGCTGGAGCTGGGGCGCATTCGCAGCAACGCGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTGTGTCCTCCGCGTTaGTGCGAATGCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLCPPR*CECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTCCAGTTCCGCCTaGTCCTTGCTGCGCATTGTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASSSA*SLLRIV
Trigger: CACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGTGCCACCTTGCGCTaGCGAGCGGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSATLR*RAASSS
Trigger: GGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGRLLL*PLSQAP
Trigger: CGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACATCTCCGCGTCGGCTaGCTGCTTCTGTTTCAGCGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRHLRVG*LLLFQR
Trigger: GCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGTGTGGTCAGCTCCTaGTCTACCTGGGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSVVSS*STWAFC
Trigger: GCAGAAGGCCCAGGTAGAGCAGGAGCTGACCACACT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCAGTCTCCTCTAGCTaGAGCCTCAGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASVSSS*SLSVVS
Trigger: GCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASSFC*CSSSAS
Trigger: CGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATCTCCAGCTGCCGCTaGCGCTCGGCCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVISSCR*RSASRV
Trigger: GACTCTGGAGGCCGAGCGGCAGCGGCAGCTGGAGAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGATCTCCAGCGTCTaGACCAACGTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWISSV*TNVTFS
Trigger: GGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCATCGTGGTCACTCTaGTGTCGCTGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASWSL*CRWISS
Trigger: GCTGGAGATCCAGCGACAGCAGAGTGACCACGATGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGAGAGGAAGCTCTTCTaGAGGGCCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRERKLF*RAWVSC
Trigger: GCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATGAAGCGCTCGCGCTaGAGCAGGCTGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVMKRSR*SRLSFS
Trigger: TGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATGAAGCGCTCGCGCTaGAGCAGGCTGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSMKRSR*SRLSFS
Trigger: TGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATGAAGCGCTCGCGCTaGAGCAGGCTGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKMKRSR*SRLSFS
Trigger: TGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSLAFS*SMKRSR
Trigger: GCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCACGCAGCTGCTTTaGTTTAGCCACCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALTQLL*FSHLVL
Trigger: CAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCTCCTCACGCAGCTaGTTTGCTTTAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACSSRS*FALATS
Trigger: CGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTGTTCCATCTGCTaGTGCTGCCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSCSIC*CCRCCS
Trigger: GGAGCAGCAGCGGCAGCAGCAGCAGATGGAACAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTTTCCTGTTCCATCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAFSCSI*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGATGGAACAGGAAAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGGCCATCAGCTCCTaGTTTTCCTGTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLAISS*FSCSIC
Trigger: GCAGATGGAACAGGAAAAGCAGGAGCTGATGGCCAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTGGCCATCAGCTCCTaGTTTTCCTGTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLAISS*FSCSIC
Trigger: GCAGATGGAACAGGAAAAGCAGGAGCTGATGGCCAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTGGCCTCCTCCATaGTGGCCATCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSWPPP*WPSAPA
Trigger: AGCAGGAGCTGATGGCCAGCATGGAGGAGGCCAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCTGCTGCTCCAGATaGTGCAGTTCCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARCCSR*CSSSCL
Trigger: CAAGCAAGAGGAACTGCAGCATCTGGAGCAGCAGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPPGSG*LLPVAA
Trigger: AGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPPGSG*LLPVAA
Trigger: AGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCCTGTGCCAAACGCTaGAGTTCCTCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPCAKR*SSSWLR
Trigger: CCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTACACATCTTCCCGCTaGGTGAGCTCAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVYTSSR*VSSATV
Trigger: CACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTACACATCTTCCCGCTaGGTGAGCTCAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKYTSSR*VSSATV
Trigger: CACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTAACAGTCCTGCAATaGTGCTGCGGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVTVLQ*CCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQELAKR*RHGGLF
Trigger: GAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWELAKR*RHGGLF
Trigger: GAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTGCCCTGGAACTTaGCAAACGGTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSCPGT*QTVQTR
Trigger: CCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCTGCCCTGGAACTTaGCAAACGGTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSCPGT*QTVQTR
Trigger: CCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCTGCCCTGGAACTTaGCAAACGGTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSCPGT*QTVQTR
Trigger: CCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGATGGTCACGGTCCTaGCCTGGAACTTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGARWSRS*PGTCQT
Trigger: CGTTTGGCAAGTTCCAGGGCAGGACCGTGACCATCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCCGTGCGGAACTGCTaGAGCAGGTCCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPVRNC*SRSRRC
Trigger: ACAGCGACGGGACCTGCTGCAGCAGTTCCGCACGGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCAGGGCCTCATAGATaGTCAGCTTCTGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSGPHR*SASALL
Trigger: AAGCAGGGCAGAAGCTGAGCATCTATGAGGCCCTGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCAACTCCTGCCGCTaGTCCTCAGTAAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSNSCR*SSVKYS
Trigger: TGAATACTTTACTGAGGAGCAGCGGCAGGAGTTGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCCGCAGCAACTCCTaGCGCTGCTCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCRSNS*RCSSVK
Trigger: CTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCCGCAGCAACTCCTaGCGCTGCTCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCRSNS*RCSSVK
Trigger: CTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRKDSLS*RRVSTS
Trigger: GGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCTCCACAGTGATCTaGTTGCGGAGACCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSTVI*LRRPRK
Trigger: CTTCCGCGGTCTCCGCAAGCAGATCACTGTGGAGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTCCACAGTGATCTaGTTGCGGAGACCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSTVI*LRRPRK
Trigger: CTTCCGCGGTCTCCGCAAGCAGATCACTGTGGAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPSRNF*RFLVTS
Trigger: GGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPSRNF*RFLVTS
Trigger: GGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTCCAGCAGACGGATaGCATGGTCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPPADG*HGPSGS
Trigger: TGATCCTGAAGGACCATGGCATCCGTCTGCTGGAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACACAGACATCTCCTTaGCCGTCTCTGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTQTSP*PSLGPQ
Trigger: TTGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGAAGCCACCGGCATTaGCTGAGAGCATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGSHRH*LRACQQ
Trigger: TTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACATCTTGGTCTTGGTaGGTGGGTCCTCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTSWSW*VGPQTH
Trigger: GTGGGTTTGAGGACCCACGCACCAAGACCAAGATGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCACCGGTCAGGTACTaGACCTCCAGGAAACGCTGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPPVRY*TSRKRW
Trigger: CCAGCGTTTCCTGGAGGTGCAGTACCTGACCGGTGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCACAGTGCCACGTTaGAGAGCTTCGTCGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASTVPR*RASSRD
Trigger: GTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCGGGCATCCACAGTaGCACGTTGCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCGHPQ*HVAELR
Trigger: ACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCGGGCATCCACAGTaGCACGTTGCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCGHPQ*HVAELR
Trigger: ACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCCTTGCTGGACTGTaGCGCAGCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVALAGL*RSLQQP
Trigger: AGGCTGCTGGAGGCTGCGGCACAGTCCAGCAAGGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGCTGTAGTAGCCCTTaGTGGACTGTGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGCSSP*WTVPQP
Trigger: AGGCTGCGGCACAGTCCAGCAAGGGCTACTACAGCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGGTCTCGTTCATCTTaGTCATCCTTTGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRSRSS*SSFACR
Trigger: TCGGCAGGCAAAGGATGAGCAAGATGAACGAGACCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000054449.14
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGCCGAGGGTCAGCTTaGGGTTGCCGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGRGSA*GCRQQC
Trigger: ACATTGCTGACGGCAACCCCAAGCTGACCCTCGGCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATGGGCTTGTGCCGGTaGATGATAGCATTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMMGLCR*MIALKR
Trigger: TCTCTTCAATGCTATCATCCACCGGCACAAGCCCAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCACCGAGAATGCCTaGTCTAGGTTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAATENA*SRFSRL
Trigger: CAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTTTGTCTGCCTCCTTaGCAGGAAGTTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMFCLPP*QEVLSP
Trigger: AGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTTTGTCTGCCTCCTTaGCAGGAAGTTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDFCLPP*QEVLSP
Trigger: AGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGTAGGGCGTCCGCCTaGTTCAGCTGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSRASA*FSCSSH
Trigger: GTGTGAGGAGCAGCTGAACCAGGCGGACGCCCTACT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACTQCG*LPGAHA
Trigger: TGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTGGGCCTCCACACTaGGCAAGTCCACGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAGPPH*ASPRPT
Trigger: AGTGGGGCGTGGACTTGCCCAGTGTGGAGGCCCAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTGGGP*RSSAAL
Trigger: CAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGTTCCTTCTCATCCTaGGCATCCTGCAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCSFSS*ASCSRS
Trigger: GGATCTGCTGCAGGATGCCCAGGATGAGAAGGAACA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGTTCCTTCTCATCCTaGGCATCCTGCAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCSFSS*ASCSRS
Trigger: GGATCTGCTGCAGGATGCCCAGGATGAGAAGGAACA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCCACCAGCTGGCATTaGTCACCCTTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPTSWH*SPLCTV
Trigger: GACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCCACCAGCTGGCATTaGTCACCCTTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPTSWH*SPLCTV
Trigger: GACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCCACCAGCTGGCATTaGTCACCCTTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPTSWH*SPLCTV
Trigger: GACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCAGGACCCACCAGCTaGCATTGGTCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAGPTS*HWSPLC
Trigger: GCACAAGGGTGACCAATGCCAGCTGGTGGGTCCTGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTGGGCCTCCTGGTTaGGCGGCGGCACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPGPPG*AAAQES
Trigger: GCTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTTCCTGGGCCTCCTaGTTGGGCGGCGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASWAS*LGGGTR
Trigger: TCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGAAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTAGCGACAGCTTCCTaGGCCTCCTGGTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLATAS*ASWLGG
Trigger: GCCGCCCAACCAGGAGGCCCAGGAAGCTGTCGCTAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTTTCTCCAGGTAGATaGCAGACAGGCTTCGGACCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVSPGR*QTGFGP
Trigger: AGGTCCGAAGCCTGTCTGCCATCTACCTGGAGAAAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTCAGCTGCTCCTCATaGGTTTTAAGCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMFSCSS*VLSTSS
Trigger: TGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTCAGCTGCTCCTCATaGGTTTTAAGCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDFSCSS*VLSTSS
Trigger: TGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVAGTA*ASFSCS
Trigger: GGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACAAGCTCTTGGAGAGTaGCAGGCACAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRQALGE*QAQPGP
Trigger: AGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCTGTGCCTCGGCCTaGGCCCGCAGCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCCASA*ARSFFS
Trigger: ACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCCGCACATCTGTCTaGGCTAGAACAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCRTSV*ARTACQ
Trigger: CTGGCAGGCTGTTCTAGCCCAGACAGATGTGCGGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCCGCACATCTGTCTaGGCTAGAACAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCRTSV*ARTACQ
Trigger: CTGGCAGGCTGTTCTAGCCCAGACAGATGTGCGGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVALAAS*HPAARR
Trigger: GCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTATTGGCACGGCCTaGATCTGCTCTTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAIGTA*ICSCRL
Trigger: GAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATGAACTTGATATACTaGCTCGTGAGCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDMNLIY*LVSVVS
Trigger: GCTGACCACGCTCACGAGCCAGTATATCAAGTTCAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCTGCAGCTCCTCTTaGATGCTGCGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCCSSS*MLRFCC
Trigger: GCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCTGCAGCTCCTCTTaGATGCTGCGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCCSSS*MLRFCC
Trigger: GCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCTGCAGCTCCTCTTaGATGCTGCGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCCSSS*MLRFCC
Trigger: GCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCGCAGTGCTTCATTaGCCTTCAGCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAAVLH*PSAASA
Trigger: AGCGCTGGCAGCTGAAGGCCAATGAAGCACTGCGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSASSS*RFCVAA
Trigger: CGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCAGACGCCGCCGCTaGAAGGCCTCGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSRRRR*KASSSA
Trigger: GGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCTCCTGCTCTACCTaGGCCTTCTGCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSCST*AFCRSV
Trigger: GACACTCCGGCAGAAGGCCCAGGTAGAGCAGGAGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCTCCAGAGTCCTCTaGAAACCCTGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAASRVL*KPCVSS
Trigger: AGAGGAGACACAGGGTTTCCAGAGGACTCTGGAGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSLCCR*ISSVCT
Trigger: GGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSLCCR*ISSVCT
Trigger: GGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSLCCR*ISSVCT
Trigger: GGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTCCAGCTCCGCAATaGCCTCCCTCAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAPAPQ*PPSDAR
Trigger: CCGAGCGTCTGAGGGAGGCCATTGCGGAGCTGGAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCTTCTGCAGGGCCTaGGTCTCCTGCAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLFCRA*VSCSIC
Trigger: GCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCTTCTGCAGGGCCTaGGTCTCCTGCAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLFCRA*VSCSIC
Trigger: GCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCTCTCGCAGCCGCTaGTTTTCCTCCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRSRSR*FSSARS
Trigger: GCTCCTGGCGGAGGAAAACCAGCGGCTGCGAGAGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWKRPG*WRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCAGGCGGACGCCATaGTCCCTGACAATAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSRRTP*SLTIRS
Trigger: GGACCTTATTGTCAGGGACCATGGCGTCCGCCTGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCAGGCGGACGCCATaGTCCCTGACAATAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSRRTP*SLTIRS
Trigger: GGACCTTATTGTCAGGGACCATGGCGTCCGCCTGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCCTTATCTGTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSLICE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCACAGATAAGGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTCACGGTCCTGCCCTaGAACTTGCCAAACGGTGCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVTVLP*NLPNGA
Trigger: TGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTCACGGTCCTGCCCTaGAACTTGCCAAACGGTGCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVTVLP*NLPNGA
Trigger: TGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPSKQS*PFRSCS
Trigger: GGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCCACAGCCACCTCTaGCTGCAGCAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGHSHL*LQQVFL
Trigger: AAGAAAGACTTGCTGCAGCCAGAGGTGGCTGTGGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCCCAGTGCCAGCCTaGGCCTCCAGCAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCPVPA*ASSKAT
Trigger: TGTGGCCTTGCTGGAGGCCCAGGCTGGCACTGGGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGTCCACAGTCAGCCTaGCGCTGGTGGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRPQSA*RWWQGR
Trigger: TCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGAGGCCCCGGCGCATaGCCTCATAGATGGTTACTT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGGPGA*PHRWLL
Trigger: AAGTAACCATCTATGAGGCCATGCGCCGGGGCCTCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGAGGCCCCGGCGCATaGCCTCATAGATGGTTACTT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGGPGA*PHRWLL
Trigger: AAGTAACCATCTATGAGGCCATGCGCCGGGGCCTCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGAGGCCCCGGCGCATaGCCTCATAGATGGTTACTT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGGPGA*PHRWLL
Trigger: AAGTAACCATCTATGAGGCCATGCGCCGGGGCCTCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCAGGCCCTTTTTCATaGCCTGGAACAGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPGPFS*PGTARW
Trigger: CCATCTCGCTGTTCCAGGCCATGAAAAAGGGCCTGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCTGCCCCTTTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLCPFE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCAAAGGGGCAGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATGGAGGAGCCACCGTaGCTGCCACCACCCGGGATG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVMEEPP*LPPPGM
Trigger: CATCCCGGGTGGTGGCAGCCACGGTGGCTCCTCCAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGAGGCCAGGTTCTGCTaGCGGATGATCTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKEARFC*RMISVF
Trigger: GAAGACCGAGATCATCCGCCAGCAGAACCTGGCCTC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGAGGCCAGGTTCTGCTaGCGGATGATCTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSEARFC*RMISVF
Trigger: GAAGACCGAGATCATCCGCCAGCAGAACCTGGCCTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGAGGCCAGGTTCTGCTaGCGGATGATCTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVEARFC*RMISVF
Trigger: GAAGACCGAGATCATCCGCCAGCAGAACCTGGCCTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGTTAGCGTCTGCCTaGAGCCAGGCAGGTAGACAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWLASA*SQAGRH
Trigger: GTGTCTACCTGCCTGGCTCCAGGCAGACGCTAACCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGGTTAGCGTCTGCCTaGAGCCAGGCAGGTAGACAC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKWLASA*SQAGRH
Trigger: GTGTCTACCTGCCTGGCTCCAGGCAGACGCTAACCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGGGCTCCGACAGCTaGTCGTGCGTGTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLGSDS*SCVSLL
Trigger: CAATAAGGACACGCACGACCAGCTGTCGGAGCCCAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTGGGCTCCGACAGCTaGTCGTGCGTGTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLGSDS*SCVSLL
Trigger: CAATAAGGACACGCACGACCAGCTGTCGGAGCCCAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCTGCGCACCTCGCTaGGCTCCGACAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSCAPR*APTAGR
Trigger: ACGACCAGCTGTCGGAGCCCAGCGAGGTGCGCAGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGAGCCGTTCCTTGGTaGCATCAACAAAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRAVPW*HQQRLR
Trigger: CCGGAGTCTTTGTTGATGCCACCAAGGAACGGCTCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCCTTCTTCATAGCCTaGTACACCGAGAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPFFIA*YTESRS
Trigger: GGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCAGACGGATGCCATaGTCCTTCAGGATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSRRMP*SFRIRP
Trigger: GGGCCTGATCCTGAAGGACCATGGCATCCGTCTGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCAGACGGATGCCATaGTCCTTCAGGATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSRRMP*SFRIRP
Trigger: GGGCCTGATCCTGAAGGACCATGGCATCCGTCTGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTCAAAGAAACCCTTaGTGTCATCTGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGQRNP*CHLRDQ
Trigger: CTGATCCCTCAGATGACACCAAGGGTTTCTTTGACC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGTCAAAGAAACCCTTaGTGTCATCTGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGQRNP*CHLRDQ
Trigger: CTGATCCCTCAGATGACACCAAGGGTTTCTTTGACC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSMSY*RPERRS
Trigger: CGACCGCCGCTCTGGTCGCCAGTATGACATCGACGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPQKAF*ARLIRS
Trigger: AGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPQKAF*ARLIRS
Trigger: AGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTTGGTCTTGGTGCGTaGGTCCTCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLGLGA*VLKPTE
Trigger: TTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTTGGTCTTGGTGCGTaGGTCCTCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLGLGA*VLKPTE
Trigger: TTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGACATCTTGGTCTTaGTGCGTGGGTCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLTSWS*CVGPQT
Trigger: GGTTTGAGGACCCACGCACCAAGACCAAGATGTCAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTGACATCTTGGTCTTaGTGCGTGGGTCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLTSWS*CVGPQT
Trigger: GGTTTGAGGACCCACGCACCAAGACCAAGATGTCAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGGCAGCTGACATCTTaGTCTTGGTGCGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGQLTS*SWCVGP
Trigger: AGGACCCACGCACCAAGACCAAGATGTCAGCTGCCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGGCAGCTGACATCTTaGTCTTGGTGCGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGQLTS*SWCVGP
Trigger: AGGACCCACGCACCAAGACCAAGATGTCAGCTGCCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACATCACGCAGCTTCTaGGCTGTGCGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTSRSF*AVRAST
Trigger: TGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACATCACGCAGCTTCTaGGCTGTGCGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTSRSF*AVRAST
Trigger: TGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACATCACGCAGCTTCTaGGCTGTGCGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTSRSF*AVRAST
Trigger: TGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGTAGTAGCCCTTGCTaGACTGTGCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCSSPC*TVPQPP
Trigger: TGGAGGCTGCGGCACAGTCCAGCAAGGGCTACTACA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGTAGTAGCCCTTGCTaGACTGTGCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCSSPC*TVPQPP
Trigger: TGGAGGCTGCGGCACAGTCCAGCAAGGGCTACTACA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGTAGTAGCCCTTGCTaGACTGTGCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCSSPC*TVPQPP
Trigger: TGGAGGCTGCGGCACAGTCCAGCAAGGGCTACTACA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGAAGCCAGAGCCAGTaGCATCAAAGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRSQSQ*HQSCHA
Trigger: GGCGTGGCAGCTTTGATGCCACTGGCTCTGGCTTCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGAAGCCAGAGCCAGTaGCATCAAAGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRSQSQ*HQSCHA
Trigger: GGCGTGGCAGCTTTGATGCCACTGGCTCTGGCTTCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGAAGCCAGAGCCAGTaGCATCAAAGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRSQSQ*HQSCHA
Trigger: GGCGTGGCAGCTTTGATGCCACTGGCTCTGGCTTCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
3UTR CAA 72 bp GGGAAGGGGCTTCTCTGGGTAGGCTGGAAGAGATGGTaGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCAC +
Preference number: 4 (lower is better)
Translates to: GKGLLWVGWKRW*AWDLPLASKTH
Trigger: GTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAACCATCTCTTCCAGCCTACCCAGAGAAGCCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLYHTL*PQQQLL
Trigger: GAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGACTTTTCATCAGGCTaGGGGACGTCCACATCTTCT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQDFSSG*GTSTSS
Trigger: AGAAGATGTGGACGTCCCTCAGCCTGATGAAAAGTC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGACTTTTCATCAGGCTaGGGGACGTCCACATCTTCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWDFSSG*GTSTSS
Trigger: AGAAGATGTGGACGTCCCTCAGCCTGATGAAAAGTC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCATCGTACAGGGATaGAACATAGGTGATGATGGA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSIVQG*NIGDDG
Trigger: TCCATCATCACCTATGTTTCATCCCTGTACGATGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTGCTCACAATGCGCTaGAGACACTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALLTMR*RHSSLS
Trigger: TGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGGTCTGCACATCATTaGACAACAGCCGGATCATAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGSAHH*TTAGSY
Trigger: GTATGATCCGGCTGTTGTTCAATGATGTGCAGACCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGGTCTGCACATCATTaGACAACAGCCGGATCATAC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGSAHH*TTAGSY
Trigger: GTATGATCCGGCTGTTGTTCAATGATGTGCAGACCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAATTCCTCTATAGACTaGTGCATGCCTCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQNSSID*CMPRWL
Trigger: CAGCCACCGAGGCATGCATCAGTCTATAGAGGAATT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGCCTCCCGAACATCTaGGAAGAACTGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRLPNI*EELEVG
Trigger: GCCTACTTCCAGTTCTTCTCAGATGTTCGGGAGGCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGCCTCCCGAACATCTaGGAAGAACTGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRLPNI*EELEVG
Trigger: GCCTACTTCCAGTTCTTCTCAGATGTTCGGGAGGCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGCCTCCCGAACATCTaGGAAGAACTGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRLPNI*EELEVG
Trigger: GCCTACTTCCAGTTCTTCTCAGATGTTCGGGAGGCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCAACCTTCTCACCATaGCGCTCAATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASTFSP*RSISSS
Trigger: GCTGGAGGAGATTGAGCGTCATGGTGAGAAGGTTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCACGGGTTCAAGCTaGGCCTTGTACGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRATGSS*ALYVIS
Trigger: GCTGATCACGTACAAGGCTCAGCTTGAACCCGTGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCTCCGATCCAGACTaGACCTTGGGCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLSDPD*TLGFLA
Trigger: TGCCAAGAAGCCCAAGGTTCAGTCTGGATCGGAGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCTCCGATCCAGACTaGACCTTGGGCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLSDPD*TLGFLA
Trigger: TGCCAAGAAGCCCAAGGTTCAGTCTGGATCGGAGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCGTGTGGCCTCACTaGTGGCAGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAVWPH*WQPASQ
Trigger: CTGAGAAGCTGGCTGCCATCAGTGAGGCCACACGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKMFCSC*SVCCSS
Trigger: GGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVMFCSC*SVCCSS
Trigger: GGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSMFCSC*SVCCSS
Trigger: GGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCATCTCCTCCGACTTaGGCTGCAGTAACTTCGCCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASPPT*AAVTSP
Trigger: AGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCATCTCCTCCGACTTaGGCTGCAGTAACTTCGCCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVASPPT*AAVTSP
Trigger: AGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCAGCCACCGTGGTGTaGCCCTGTGCCAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSATVV*PCAKRC
Trigger: GCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTTCACAGCCTCATTaGCTGTCAGCCGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPSQPH*LSAADS
Trigger: GGAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGTCCTTGTAGCCGGTaGCGGCACGCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGPCSR*RHAQLT
Trigger: TGTCAGCTGAGCGTGCCGTCACCGGCTACAAGGACC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAAACTGAGCTCTGCTaGGGATCTTGGCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQTELC*GSWRPG
Trigger: TCCTGGACGCCAAGATCCTCAGCAGAGCTCAGTTTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAAACTGAGCTCTGCTaGGGATCTTGGCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQTELC*GSWRPG
Trigger: TCCTGGACGCCAAGATCCTCAGCAGAGCTCAGTTTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGACAGCTCTTTGACTaGTGTCTTGCCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGQLFD*CLAILE
Trigger: CTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGCTGTGCTGGGTCTaGGGAGGCCCCGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWLCWV*GGPGAW
Trigger: CCATGCGCCGGGGCCTCCTCAGACCCAGCACAGCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCCGGGATCATGTTTaGCTGCATCACCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLRDHV*LHHLPQ
Trigger: CTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACATGGCCTGGAAGAGTaGGATGGTCTGTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAHGLEE*DGLFRV
Trigger: TACACGGAACAGACCATCTCACTCTTCCAGGCCATG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGTGCGTGTCCTTATTaGGGTAGCCGCGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRACPY*GSRVGK
Trigger: CTTACCAACGCGGCTACCTCAATAAGGACACGCACG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGTGCGTGTCCTTATTaGGGTAGCCGCGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRACPY*GSRVGK
Trigger: CTTACCAACGCGGCTACCTCAATAAGGACACGCACG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGTGCGTGTCCTTATTaGGGTAGCCGCGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRACPY*GSRVGK
Trigger: CTTACCAACGCGGCTACCTCAATAAGGACACGCACG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTGTGGCCTCGTCCATaGCTTGAGAGCGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLWPRP*LESVPA
Trigger: AGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTTGACGACGCCATCTaGGGAGGAGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLDDAI*GGDGDL
Trigger: GAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTTGACGACGCCATCTaGGGAGGAGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLDDAI*GGDGDL
Trigger: GAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCACCGGCATTGCCTaGGAGCATGTCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRATGIA*EHVSKL
Trigger: GAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGGGCCAGCAGAACTaGTGGGGTAGGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWGQQN*WGRRKM
Trigger: CATCTTCCTCCTACCCCATCAGTTCTGCTGGCCCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACTTGGAGTAAGCACTaGCATCACGCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATWSKH*HHAASG
Trigger: CCCAGAAGCTGCGTGATGTCAGTGCTTACTCCAAGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGGTCTTGGGGCACGTaGGGTACTTGGAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKWSWGT*GTWSKH
Trigger: GTGCTTACTCCAAGTACCTCACGTGCCCCAAGACCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGTCTTGGGGCACGTaGGGTACTTGGAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWSWGT*GTWSKH
Trigger: GTGCTTACTCCAAGTACCTCACGTGCCCCAAGACCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGTCTTGGGGCACGTaGGGTACTTGGAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWSWGT*GTWSKH
Trigger: GTGCTTACTCCAAGTACCTCACGTGCCCCAAGACCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTTGTAGGAGATCTTaGGCTTGGTCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPCRRS*AWSWGT
Trigger: CGTGCCCCAAGACCAAGCTCAAGATCTCCTACAAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTTGTAGGAGATCTTaGGCTTGGTCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPCRRS*AWSWGT
Trigger: CGTGCCCCAAGACCAAGCTCAAGATCTCCTACAAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCTTGTAGGAGATCTTaGGCTTGGTCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPCRRS*AWSWGT
Trigger: CGTGCCCCAAGACCAAGCTCAAGATCTCCTACAAGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTTCGTACAGGTCACTaGTGTGCCTCTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLRTGH*CASEPL
Trigger: CAGAGGCTCAGAGGCACATCAGTGACCTGTACGAAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTGAGATCTGGAAGTaGAGGATGATTGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSEIWK*RMIVQM
Trigger: CATCTGGACAATCATCCTGCACTTCCAGATCTCAGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTGAGATCTGGAAGTaGAGGATGATTGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSEIWK*RMIVQM
Trigger: CATCTGGACAATCATCCTGCACTTCCAGATCTCAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCCAGGTCCCGCTCTaGCACCGAGAATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSQVPL*HRECLV
Trigger: GACCAGGCATTCTCGGTGGCAGAGCGGGACCTGGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGTGCCGGATCCATTaGAGCAGCAGCAACACAAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWCRIH*SSSNTS
Trigger: GCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGGTGCCGGATCCATTaGAGCAGCAGCAACACAAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKWCRIH*SSSNTS
Trigger: GCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCTGGAGGGGAACTTaGGCTCCTCAAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSWRGT*APQKQR
Trigger: CCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGACCGGTTTTTGTCTaGCTCCTTGGCAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGPVFV*LLGRKF
Trigger: GAACTTCCTGCCAAGGAGGCAGACAAAAACCGGTCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGCCACATGCAGCTTaGCCCACTCCTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWPHAA*PTPSPH
Trigger: ATGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGGCCACATGCAGCTTaGCCCACTCCTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKWPHAA*PTPSPH
Trigger: ATGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGCCACATGCAGCTTaGCCCACTCCTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWPHAA*PTPSPH
Trigger: ATGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCAGGATGGCCACATaGAGCTTGCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSRMAT*SLPHSF
Trigger: GAAGGAGTGGGGCAAGCTGCATGTGGCCATCCTGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAACTCGCTTCGCAGTTaGTTCTCCCGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSNSLRS*FSRSRM
Trigger: CATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAACTCGCTTCGCAGTTaGTTCTCCCGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKNSLRS*FSRSRM
Trigger: CATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCGCCTGGTTCAGCTaGTCCTCACACAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSAWFS*SSHSPA
Trigger: GGCTGGGCTGTGTGAGGAGCAGCTGAACCAGGCGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGGCTQ*GWLPGA
Trigger: AGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGCCTCTGTGTACTCTaGAGGGTCACCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRLCVL*RVTWVT
Trigger: TGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACAGCTCCACTGTGTCTaGAAGGCAGCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRQLHCV*KAAWKD
Trigger: GTCCTTCCAGGCTGCCTTGCAGACACAGTGGAGCTG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVSCSF*NCSSAS
Trigger: GGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVSCSF*NCSSAS
Trigger: GGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCATCCTGGGCATCCTaGAGCAGATCCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSWAS*SRSSSL
Trigger: CAGGCTCGAGGATCTGCTGCAGGATGCCCAGGATGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCAGGCCTGAGAGGTaGCCCTTGTACTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSARPER*PLYSFS
Trigger: ACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCATTGGTCACCCTTGTaGACAGTCACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVHWSPL*TVTSTC
Trigger: GCAGGTGGAGGTGACTGTGCACAAGGGTGACCAATG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCATTGGTCACCCTTGTaGACAGTCACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSHWSPL*TVTSTC
Trigger: GCAGGTGGAGGTGACTGTGCACAAGGGTGACCAATG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCACAGGCCTCCAGCTaGAGCCGGATATCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSQASS*SRISLS
Trigger: GCTCAAGGATATCCGGCTGCAGCTGGAGGCCTGTGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTGCGCTTTCTGTTaGTCAGCGATGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVACAFC*SAMRWA
Trigger: CGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGACCTGTTCCAGCTTaGCCAGGGTCAGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGPVPA*PGSVPT
Trigger: AGTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGACCTGTTCCAGCTTaGCCAGGGTCAGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGPVPA*PGSVPT
Trigger: AGTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCTGGCGGCCCAGCTaGTCGAGCTCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISWRPS*SSSRCR
Trigger: GCGGCAGCGTGAGCTCGAGCAGCTGGGCCGCCAGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCACGGCCTGGATCTaGTCTTGCCGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGTAWI*SCRLLA
Trigger: TGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSASCR*FSSAAS
Trigger: GGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTGTGCGTCCACTGCTaGCTCCTCGCGCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILCVHC*LLAPRH
Trigger: GTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCGCTTCTGCTGCTGTaGGTCCACTGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVALLLL*VHCCLL
Trigger: GAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGATGCTGCGCTTCTaGTGCTGTGCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWMLRF*CCASTA
Trigger: AGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTCCTCTTGGATGCTaGGCTTCTGCTGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAPLGC*ASAAVR
Trigger: ACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTGCAGCCTCCACCTaGTGGGCCTTGGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSAAST*WALAWI
Trigger: GATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCTCATCCTGCACCTaGCTTCGCAAGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLSSCT*LRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCTCATCCTGCACCTaGCTTCGCAAGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLSSCT*LRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCTCATCCTGCACCTaGCTTCGCAAGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLSSCT*LRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCATTGGCCTTCAGCTaGCAGCGCTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSLAFS*QRSSSR
Trigger: GCGGGAGCTGGAGCGCTGGCAGCTGAAGGCCAATGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLGIGL*QALLLC
Trigger: GCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCCAGGCGCTGCTGTaGGGTGCCCTCCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISQALL*GALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGTAAGCACCCGCTCTaGCTCGGCCCGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISKHPL*LGPLAG
Trigger: GCCCGCCAGCGGGCCGAGGCAGAGCGGGTGCTTACT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTTGAGTGCAATCTCTaGCTCCGTCTTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQFECNL*LRLEPC
Trigger: ACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTTGAGTGCAATCTCTaGCTCCGTCTTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWFECNL*LRLEPC
Trigger: ACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGTCCTCCGCGTTGCTaGGAATGCGCCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCPPRC*ECAPAP
Trigger: TGGAGCTGGGGCGCATTCGCAGCAACGCGGAGGACA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPPAPC*ALCPPR
Trigger: ACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCTCCCGGCGCCTCTaGTCCTCCTCTGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASRRL*SSSAAN
Trigger: GTTGGCGGCAGAGGAGGAGCAGAGGCGCCGGGAGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTGCCAGGCTCCTCTaGACGCGCTCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAARLL*TRSSAS
Trigger: GGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGACGCGCCGCCTCCTaGTCCGCTTCCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRRAAS*SASLRS
Trigger: GCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLLFQR*LLCLGP
Trigger: CGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTGCAAACTTTTTATaGTTCTCCATCTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSANFL*FSISAS
Trigger: CGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTGCAAACTTTTTATaGTTCTCCATCTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSANFL*FSISAS
Trigger: CGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTCTGCCGGAGTGTCTaGTCTGCAAACTTTTTATGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDFCRSV*SANFLC
Trigger: GCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCAGTCTCCTCTAGCTaGAGCCTCAGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSVSSS*SLSVVS
Trigger: GCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCAGTCTCCTCTAGCTaGAGCCTCAGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSVSSS*SLSVVS
Trigger: GCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSTWLR*RAASVT
Trigger: GGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTTCCTGCACCGCCTaGATCTTCTCCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVASCTA*IFSFSI
Trigger: GATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTTCCTGCACCGCCTaGATCTTCTCCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASCTA*IFSFSI
Trigger: GATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTTCCTGCACCGCCTaGATCTTCTCCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASCTA*IFSFSI
Trigger: GATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSFCC*SSSASA
Trigger: GGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIALISS*RCRSAS
Trigger: GGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCGATCTCTTCAGCCTaGTTCCGGAAGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPISSA*FRKRWA
Trigger: CGCCCAGCGCTTCCGGAAGCAGGCTGAAGAGATCGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGGATCTCCAGCGTCTaGACCAACGTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKWISSV*TNVTFS
Trigger: GGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGATCTCCAGCGTCTaGACCAACGTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWISSV*TNVTFS
Trigger: GGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGATCTCCAGCGTCTaGACCAACGTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWISSV*TNVTFS
Trigger: GGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCATCGTGGTCACTCTaGTGTCGCTGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASWSL*CRWISS
Trigger: GCTGGAGATCCAGCGACAGCAGAGTGACCACGATGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATGAAGCGCTCGCGCTaGAGCAGGCTGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRMKRSR*SRLSFS
Trigger: TGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCACGCAGCTGCTTTaGTTTAGCCACCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLTQLL*FSHLVL
Trigger: CAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCACGCAGCTGCTTTaGTTTAGCCACCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLTQLL*FSHLVL
Trigger: CAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTCACGCAGCTGCTTTaGTTTAGCCACCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLTQLL*FSHLVL
Trigger: CAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCTCCTCACGCAGCTaGTTTGCTTTAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCSSRS*FALATS
Trigger: CGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTTTCCTGTTCCATCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSFSCSI*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGATGGAACAGGAAAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTTTCCTGTTCCATCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVFSCSI*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGATGGAACAGGAAAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTTTCCTGTTCCATCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKFSCSI*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGATGGAACAGGAAAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTGGCCATCAGCTCCTaGTTTTCCTGTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALAISS*FSCSIC
Trigger: GCAGATGGAACAGGAAAAGCAGGAGCTGATGGCCAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTCAGCCTCGCGCTaGCGCCTCCTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSASR*RLLASS
Trigger: GGAGGAGGCCAGGAGGCGGCAGCGCGAGGCTGAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGCTGCTGCTCCAGATaGTGCAGTTCCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRCCSR*CSSSCL
Trigger: CAAGCAAGAGGAACTGCAGCATCTGGAGCAGCAGCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPPGSG*LLPVAA
Trigger: AGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTAACAGTCCTGCAATaGTGCTGCGGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVTVLQ*CCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTAACAGTCCTGCAATaGTGCTGCGGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVTVLQ*CCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTAACAGTCCTGCAATaGTGCTGCGGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVTVLQ*CCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCAGGAAGCCCGAGGCTaGCTGGGCCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVQEARG*LGLQQD
Trigger: ATCTTGCTGGAGGCCCAGGCAGCCTCGGGCTTCCTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTGGGTCAGACAAGATaGGGTTCATCTCTTCATCGA +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLGQTR*GSSLHR
Trigger: TCGATGAAGAGATGAACCGCATCTTGTCTGACCCAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAELAKR*RHGGLF
Trigger: GAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGATGGTCACGGTCCTaGCCTGGAACTTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRWSRS*PGTCQT
Trigger: CGTTTGGCAAGTTCCAGGGCAGGACCGTGACCATCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGATGGTCACGGTCCTaGCCTGGAACTTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRWSRS*PGTCQT
Trigger: CGTTTGGCAAGTTCCAGGGCAGGACCGTGACCATCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGATGGTCACGGTCCTaGCCTGGAACTTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRWSRS*PGTCQT
Trigger: CGTTTGGCAAGTTCCAGGGCAGGACCGTGACCATCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCAGGGTCGATGATATaGCCAGTGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAGSMI*PVPAWA
Trigger: GGCCCAGGCTGGCACTGGGCATATCATCGACCCTGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGGATCATGTTTGACTaGATCACCTCCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGIMFD*ITSHRD
Trigger: GTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTCCTGTGGCTAGCTaGGCATCCAGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPPVAS*ASSSLS
Trigger: GCTGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTCCACAGTGATCTaGTTGCGGAGACCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSTVI*LRRPRK
Trigger: CTTCCGCGGTCTCCGCAAGCAGATCACTGTGGAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPSRNF*RFLVTS
Trigger: GGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCGGTGGCTGCCTGTaGTTCCAGGAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAGGCL*FQELKG
Trigger: GCCTTTGAGCTCCTGGAAGCACAGGCAGCCACCGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCTCCAGCAGACGGATaGCATGGTCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPPADG*HGPSGS
Trigger: TGATCCTGAAGGACCATGGCATCCGTCTGCTGGAGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTCCAGCAGACGGATaGCATGGTCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPPADG*HGPSGS
Trigger: TGATCCTGAAGGACCATGGCATCCGTCTGCTGGAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCACCACGCGGCGCTTaGGCACTGAGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSPRGA*ALRTWR
Trigger: CCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACACAGACATCTCCTTaGCCGTCTCTGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATQTSP*PSLGPQ
Trigger: TTGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGAAGCCACCGGCATTaGCTGAGAGCATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGSHRH*LRACQQ
Trigger: TTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTCTGTGTCCAGGATaGCGGCCACGGGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSLCPG*RPRGQS
Trigger: AGACTGGCCCCGTGGCCGGCATCCTGGACACAGAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACATCTTGGTCTTGGTaGGTGGGTCCTCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGATSWSW*VGPQTH
Trigger: GTGGGTTTGAGGACCCACGCACCAAGACCAAGATGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCACAGTGCCACGTTaGAGAGCTTCGTCGAGAGAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSTVPR*RASSRD
Trigger: GTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCACAGTGCCACGTTaGAGAGCTTCGTCGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSTVPR*RASSRD
Trigger: GTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCAGCTTCTGGGCTGTaGGGGCATCCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAASGL*GHPQCH
Trigger: GTGGCACTGTGGATGCCCGCACAGCCCAGAAGCTGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGTTGTCCTCTGAGCTaGTTCTCTTGCTACCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGCPLS*FSCYPG
Trigger: GCCTGGGTAGCAAGAGAACCAGCTCAGAGGACAACC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023226.13
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGGGAGATGAGGTTGTaGCCATCACGGAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKREMRL*PSRRSS
Trigger: CGAAGACCTCCGTGATGGCCACAACCTCATCTCCCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACATTCTGCAGCTTGTaGAAGCGCATCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTFCSL*KRILPF
Trigger: GAAAGGGAGGATGCGCTTCCACAAGCTGCAGAATGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCACCGAGAATGCCTaGTCTAGGTTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVATENA*SRFSRL
Trigger: CAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCACCGAGAATGCCTaGTCTAGGTTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSATENA*SRFSRL
Trigger: CAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCTQCG*LPGAHA
Trigger: TGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCTQCG*LPGAHA
Trigger: TGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGTTCCTTCTCATCCTaGGCATCCTGCAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGACSFSS*ASCSRS
Trigger: GGATCTGCTGCAGGATGCCCAGGATGAGAAGGAACA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCCACCAGCTGGCATTaGTCACCCTTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPTSWH*SPLCTV
Trigger: GACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCACCTTCCAGTGGGATaGCTGGGCAGGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVHLPVG*LGRTHQ
Trigger: CTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGVLIQ*QPQTVH
Trigger: GTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICSAMR*AHSRAG
Trigger: CCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTPSAE*VQQVTA
Trigger: AGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCCGCACATCTGTCTaGGCTAGAACAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCRTSV*ARTACQ
Trigger: CTGGCAGGCTGTTCTAGCCCAGACAGATGTGCGGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCAGGGCCTTCTCCTaGCGCAGCTGTTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSRAFS*RSCSRA
Trigger: TGCGCGAGAACAGCTGCGCCAGGAGAAGGCCCTGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATCCAGACTGAACCTTaGGCTTCTTGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVIQTEP*ASWQGR
Trigger: CCTCCCCTGCCAAGAAGCCCAAGGTTCAGTCTGGAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATCCAGACTGAACCTTaGGCTTCTTGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKIQTEP*ASWQGR
Trigger: CCTCCCCTGCCAAGAAGCCCAAGGTTCAGTCTGGAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATCCAGACTGAACCTTaGGCTTCTTGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSIQTEP*ASWQGR
Trigger: CCTCCCCTGCCAAGAAGCCCAAGGTTCAGTCTGGAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASSSA*ALAWAC
Trigger: ACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCTGCAGCTCCTCTTaGATGCTGCGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCCSSS*MLRFCC
Trigger: GCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTGCCGTTTGCGCTaGCTCTCATCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVACRLR*LSSCTC
Trigger: GCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCTCCAGAGTCCTCTaGAAACCCTGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASRVL*KPCVSS
Trigger: AGAGGAGACACAGGGTTTCCAGAGGACTCTGGAGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTCCAGAGTCCTCTaGAAACCCTGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASRVL*KPCVSS
Trigger: AGAGGAGACACAGGGTTTCCAGAGGACTCTGGAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCTCCAGAGTCCTCTaGAAACCCTGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVASRVL*KPCVSS
Trigger: AGAGGAGACACAGGGTTTCCAGAGGACTCTGGAGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCTTCCGGAAGCGCTaGGCGTCCTCCTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICFRKR*ASSSAR
Trigger: CCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAAGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTAGCCACCTCGTCCTaGAAGAGCTGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLATSS*KSCSSL
Trigger: CAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTAGCCACCTCGTCCTaGAAGAGCTGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLATSS*KSCSSL
Trigger: CAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCGCTGCCGCCTCCTaGCCTCCTCCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRAAAS*PPPCWP
Trigger: TGGCCAGCATGGAGGAGGCCAGGAGGCGGCAGCGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVHPGR*AVPSWK
Trigger: CTTCCACGAAGGCACTGCCCAACGGCCGGGATGCAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSVSHW*ASVTVL
Trigger: CAGGACTGTTACTGAAGCCCACCAATGAGAAACTGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSVSHW*ASVTVL
Trigger: CAGGACTGTTACTGAAGCCCACCAATGAGAAACTGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCACTCAGTTTCTCATTaGTGGGCTTCAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMHSVSH*WASVTV
Trigger: GACTGTTACTGAAGCCCACCAATGAGAAACTGAGTG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCACTCAGTTTCTCATTaGTGGGCTTCAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDHSVSH*WASVTV
Trigger: GACTGTTACTGAAGCCCACCAATGAGAAACTGAGTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCACAGGCACACGGTaGCTGTGCACAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSTGTR*LCTGSM
Trigger: CATTGATCCTGTGCACAGCCACCGTGTGCCTGTGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCACAGGCACACGGTaGCTGTGCACAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSTGTR*LCTGSM
Trigger: CATTGATCCTGTGCACAGCCACCGTGTGCCTGTGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACGGTGCAGACACGGTaGCCTTTTCGAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTVQTR*PFRRRH
Trigger: GTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACGGTGCAGACACGGTaGCCTTTTCGAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTVQTR*PFRRRH
Trigger: GTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTCACGGTCCTGCCCTaGAACTTGCCAAACGGTGCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVTVLP*NLPNGA
Trigger: TGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGCCACAGCCACCTCTaGCTGCAGCAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGHSHL*LQQVFL
Trigger: AAGAAAGACTTGCTGCAGCCAGAGGTGGCTGTGGCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCAAGCCGGTCAGCTaGTCAGACCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLKPVS*SDRHRC
Trigger: ACAGCGGTGCCGGTCTGACCAGCTGACCGGCTTGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGAGGCCCCGGCGCATaGCCTCATAGATGGTTACTT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGGPGA*PHRWLL
Trigger: AAGTAACCATCTATGAGGCCATGCGCCGGGGCCTCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGACATACAGACGTTaGTTCCGCACAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWTYRR*FRTGST
Trigger: GGTGGACCCTGTGCGGAACCAACGTCTGTATGTCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGACATACAGACGTTaGTTCCGCACAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWTYRR*FRTGST
Trigger: GGTGGACCCTGTGCGGAACCAACGTCTGTATGTCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGACAGCAGCTTCTCATaGAGTTCAGGGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSDSSFS*SSGPTT
Trigger: CGTAGTGGGCCCTGAACTCCATGAGAAGCTGCTGTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGACAGCAGCTTCTCATaGAGTTCAGGGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKDSSFS*SSGPTT
Trigger: CGTAGTGGGCCCTGAACTCCATGAGAAGCTGCTGTC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGACAGCAGCTTCTCATaGAGTTCAGGGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVDSSFS*SSGPTT
Trigger: CGTAGTGGGCCCTGAACTCCATGAGAAGCTGCTGTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCTGGAACAGCGAGATaGTGTTGCCCGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPGTAR*CCPSRD
Trigger: ATCCCTACTCGGGCAACACCATCTCGCTGTTCCAGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCCTTTTTCATGGCCTaGAACAGCGAGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPFFMA*NSEMVL
Trigger: CAACACCATCTCGCTGTTCCAGGCCATGAAAAAGGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCCTTTTTCATGGCCTaGAACAGCGAGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPFFMA*NSEMVL
Trigger: CAACACCATCTCGCTGTTCCAGGCCATGAAAAAGGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCAGGCCCTTTTTCATaGCCTGGAACAGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPGPFS*PGTARW
Trigger: CCATCTCGCTGTTCCAGGCCATGAAAAAGGGCCTGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCAGGCCCTTTTTCATaGCCTGGAACAGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPGPFS*PGTARW
Trigger: CCATCTCGCTGTTCCAGGCCATGAAAAAGGGCCTGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTTGGTGTCATCACTTaGATCTGCCAGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLGVIT*ICQHTV
Trigger: AACCGTGTGCTGGCAGATCCAAGTGATGACACCAAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTTGGTGTCATCACTTaGATCTGCCAGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLGVIT*ICQHTV
Trigger: AACCGTGTGCTGGCAGATCCAAGTGATGACACCAAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGAGGCCAGGTTCTGCTaGCGGATGATCTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGREARFC*RMISVF
Trigger: GAAGACCGAGATCATCCGCCAGCAGAACCTGGCCTC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTGGGCTCCGACAGCTaGTCGTGCGTGTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLGSDS*SCVSLL
Trigger: CAATAAGGACACGCACGACCAGCTGTCGGAGCCCAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCGAGAGCCGTTCCTTaGTGGCATCAACAAAGACTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPRAVP*WHQQRL
Trigger: GAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCCTTCTTCATAGCCTaGTACACCGAGAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPFFIA*YTESRS
Trigger: GGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCCTTCTTCATAGCCTaGTACACCGAGAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPFFIA*YTESRS
Trigger: GGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCAGACGGATGCCATaGTCCTTCAGGATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSRRMP*SFRIRP
Trigger: GGGCCTGATCCTGAAGGACCATGGCATCCGTCTGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGACACAGGCCCGTCTaGGGGTCAGTGATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRHRPV*GSVMQR
Trigger: GCGCTGCATCACTGACCCCCAGACGGGCCTGTGTCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCAGGTACGTCTGGTaGTCAATGAGACCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSRYVW*SMRPLR
Trigger: CCGCAAGGGTCTCATTGACCACCAGACGTACCTGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCAGGTACGTCTGGTaGTCAATGAGACCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSRYVW*SMRPLR
Trigger: CCGCAAGGGTCTCATTGACCACCAGACGTACCTGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCAGGTACGTCTGGTaGTCAATGAGACCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSRYVW*SMRPLR
Trigger: CCGCAAGGGTCTCATTGACCACCAGACGTACCTGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPQKAF*ARLIRS
Trigger: AGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTTGGTCTTGGTGCGTaGGTCCTCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALGLGA*VLKPTE
Trigger: TTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACATCACGCAGCTTCTaGGCTGTGCGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTSRSF*AVRAST
Trigger: TGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGAAGCCAGAGCCAGTaGCATCAAAGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRSQSQ*HQSCHA
Trigger: GGCGTGGCAGCTTTGATGCCACTGGCTCTGGCTTCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCGTTCATCTGTGGCTaGGGCAGGCTCCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSFICG*GRLRTW
Trigger: CCAGGTCCGGAGCCTGCCCCAGCCACAGATGAACGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTCACCTGAATGTCTaGGATCTGGAAGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAHLNV*DLEVQD
Trigger: ATCCTGCACTTCCAGATCTCAGACATTCAGGTGAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGACTGTCCGCTCACCTaGATGTCTGAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVDCPLT*MSEIWK
Trigger: CTTCCAGATCTCAGACATTCAGGTGAGCGGACAGTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGACTGTCCGCTCACCTaGATGTCTGAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSDCPLT*MSEIWK
Trigger: CTTCCAGATCTCAGACATTCAGGTGAGCGGACAGTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLYHTL*PQQQLL
Trigger: GAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCCAGGGGGAATCTTaGGCTGGCCCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSQGES*AGPLVL
Trigger: CAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTGCTCACAATGCGCTaGAGACACTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLLTMR*RHSSLS
Trigger: TGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTGCTCACAATGCGCTaGAGACACTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLLTMR*RHSSLS
Trigger: TGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTGCTCACAATGCGCTaGAGACACTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLLTMR*RHSSLS
Trigger: TGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGGTCTGCACATCATTaGACAACAGCCGGATCATAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGSAHH*TTAGSY
Trigger: GTATGATCCGGCTGTTGTTCAATGATGTGCAGACCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGCCTCCCGAACATCTaGGAAGAACTGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRLPNI*EELEVG
Trigger: GCCTACTTCCAGTTCTTCTCAGATGTTCGGGAGGCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRCWNH*APSSGM
Trigger: CATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGTGTGACCAGGGCCTaGTGCTGCGCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSVTRA*CCASSL
Trigger: TAGACTGGAGGCGCAGCATCAGGCCCTGGTCACACT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCAACCTTCTCACCATaGCGCTCAATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSTFSP*RSISSS
Trigger: GCTGGAGGAGATTGAGCGTCATGGTGAGAAGGTTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCAACCTTCTCACCATaGCGCTCAATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSTFSP*RSISSS
Trigger: GCTGGAGGAGATTGAGCGTCATGGTGAGAAGGTTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCAACCTTCTCACCATaGCGCTCAATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSTFSP*RSISSS
Trigger: GCTGGAGGAGATTGAGCGTCATGGTGAGAAGGTTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCTCCGATCCAGACTaGACCTTGGGCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLSDPD*TLGFLA
Trigger: TGCCAAGAAGCCCAAGGTTCAGTCTGGATCGGAGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRMFCSC*SVCCSS
Trigger: GGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCATCTCCTCCGACTTaGGCTGCAGTAACTTCGCCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASPPT*AAVTSP
Trigger: AGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGACGGCACGCTCAGCTaGCAGCAGTTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVDGTLS*QQFVVQ
Trigger: CTGCACCACAAACTGCTGTCAGCTGAGCGTGCCGTC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACAAACTGAGCTCTGCTaGGGATCTTGGCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRQTELC*GSWRPG
Trigger: TCCTGGACGCCAAGATCCTCAGCAGAGCTCAGTTTG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCCGGGATCATGTTTaGCTGCATCACCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLRDHV*LHHLPQ
Trigger: CTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPESQP*AGHADP
Trigger: AGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTTACCCTCCCAGCCTaGAAGTCAGCCATGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVTLPA*KSAMSR
Trigger: CCGGCTCATGGCTGACTTTCAGGCTGGGAGGGTAAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCATGGCCTGGAAGAGTaGGATGGTCTGTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVHGLEE*DGLFRV
Trigger: TACACGGAACAGACCATCTCACTCTTCCAGGCCATG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCATGGCCTGGAAGAGTaGGATGGTCTGTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKHGLEE*DGLFRV
Trigger: TACACGGAACAGACCATCTCACTCTTCCAGGCCATG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGTGCGTGTCCTTATTaGGGTAGCCGCGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRACPY*GSRVGK
Trigger: CTTACCAACGCGGCTACCTCAATAAGGACACGCACG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTCGTCCATGACTTaGGAGCGTACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASSMT*ERTSSS
Trigger: GGAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAALAH*GLGGCL
Trigger: AAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTTGACGACGCCATCTaGGGAGGAGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLDDAI*GGDGDL
Trigger: GAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVLVQC*AVNEVL
Trigger: AAGAACCTCATTGACCGCTCAGCACTGGACCAGTAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVLVQC*AVNEVL
Trigger: AAGAACCTCATTGACCGCTCAGCACTGGACCAGTAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACTTGGAGTAAGCACTaGCATCACGCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTWSKH*HHAASG
Trigger: CCCAGAAGCTGCGTGATGTCAGTGCTTACTCCAAGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACTTGGAGTAAGCACTaGCATCACGCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTWSKH*HHAASG
Trigger: CCCAGAAGCTGCGTGATGTCAGTGCTTACTCCAAGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTTGTAGGAGATCTTaGGCTTGGTCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPCRRS*AWSWGT
Trigger: CGTGCCCCAAGACCAAGCTCAAGATCTCCTACAAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCGGCGGCCATAGCCTaGGGAAGAGTAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAAAIA*GRVGGR
Trigger: TCTTCCTCCTACTCTTCCTCAGGCTATGGCCGCCGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATACGGCAGCCAGAGTaGCAACATGACCCACGACTA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVIRQPE*QHDPRL
Trigger: TAGTCGTGGGTCATGTTGTCACTCTGGCTGCCGTAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000054449.14
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGAAAGTTTTCTTCTaGACACGGTCTCGTTCATCT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVKVFF*TRSRSS
Trigger: AGATGAACGAGACCGTGTGCAGAAGAAAACTTTCAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGGTCAGCTTGGGGTTaGCGTCAGCAATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGSAWG*RQQCHH
Trigger: ATGATGACATTGCTGACGGCAACCCCAAGCTGACCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGTGCCGGATCCATTaGAGCAGCAGCAACACAAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWCRIH*SSSNTS
Trigger: GCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGACCGGTTTTTGTCTaGCTCCTTGGCAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGPVFV*LLGRKF
Trigger: GAACTTCCTGCCAAGGAGGCAGACAAAAACCGGTCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGACCGGTTTTTGTCTaGCTCCTTGGCAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGPVFV*LLGRKF
Trigger: GAACTTCCTGCCAAGGAGGCAGACAAAAACCGGTCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAACTCGCTTCGCAGTTaGTTCTCCCGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRNSLRS*FSRSRM
Trigger: CATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTAGCTTGCTCACAATaGGCTGAAGACACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVACSQ*AEDTPA
Trigger: GGCTGGAGTGTCTTCAGCGCATTGTGAGCAAGCTAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCATCTTTAAGGGTCTaGACATCATTGAACAACAGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPSLRV*TSLNNS
Trigger: GCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCATCTTTAAGGGTCTaGACATCATTGAACAACAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPSLRV*TSLNNS
Trigger: GCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCSPCG*RPSLRV
Trigger: GACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCSPCG*RPSLRV
Trigger: GACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTACCAGGCGCTCATaGAGACGATACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVATRRS*RRYTLR
Trigger: CCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATGCAGCAACACAGCTaGAGCATCCAGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKMQQHS*SIQLHC
Trigger: ACAGTGGAGCTGGATGCTGCAGCTGTGTTGCTGCAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATGCAGCAACACAGCTaGAGCATCCAGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSMQQHS*SIQLHC
Trigger: ACAGTGGAGCTGGATGCTGCAGCTGTGTTGCTGCAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCAAGTGTGCTTCAATaGAGCAACACAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSVLQ*SNTAAA
Trigger: TGCTGCAGCTGTGTTGCTGCATTGAAGCACACTTGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVSCSF*NCSSAS
Trigger: GGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCAGGCCTGAGAGGTaGCCCTTGTACTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRARPER*PLYSFS
Trigger: ACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCGGGTGGGCAGGGTTaGGTGGCTTCAACTGCACAA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPGGQG*VASTAQ
Trigger: TTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCCGACTGAGGCTCTaGCACGCCAGAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSRLRL*HARRLF
Trigger: GAAGAGCCTTCTGGCGTGGCAGAGCCTCAGTCGGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCTCCTGCTCACCCTaGTCCAGGCTTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSCSP*SRLCSN
Trigger: GTTACTACAAAGCCTGGAGCAGGGTGAGCAGGAGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTCCTGCTCACCCTaGTCCAGGCTTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSCSP*SRLCSN
Trigger: GTTACTACAAAGCCTGGAGCAGGGTGAGCAGGAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCCTCCACCTCAGCCTaGGCTTTCTGTTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPSTSA*AFCCSA
Trigger: CGCTGAGCAACAGAAAGCGCAGGCTGAGGTGGAGGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGACCTGTTCCAGCTTaGCCAGGGTCAGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGPVPA*PGSVPT
Trigger: AGTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTGTTGAATACTGGCTaGTGTGCCTCGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVLNTG*CASAWA
Trigger: GGCCCAGGCCGAGGCACAGCAGCCAGTATTCAACAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCTCGAGCTCACGCTaGCGCACATCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCSSSR*RTSVWA
Trigger: AGCCCAGACAGATGTGCGGCAGCGTGAGCTCGAGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTGGATCTGCTCTTaGCGCCTCTTGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAWICS*RLLASC
Trigger: GCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTCGCTGTAGCGCGTaGGCAGATCCACGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVARCSA*ADPRTP
Trigger: AGGAGTACGTGGATCTGCGCACGCGCTACAGCGAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTGTGCTTCCAGCTCTaGCTGGGCCTTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLCFQL*LGLSLG
Trigger: GCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATGCTGCGCTTCTGCTaGTGTGCGTCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVMLRFC*CASTAA
Trigger: GGCAGCAGTGGACGCACAGCAGCAGAAGCGCAGCAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTTGGCCTGGATCTCTaGCTCCGAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLGLDL*LRALPQ
Trigger: CTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCGCTTCTGCGCTTCTaGCTCCTCAGCCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPLLRF*LLSPSA
Trigger: CGCGCTCGGGCTGAGGAGGCAGAAGCGCAGAAGCGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCTCATCCTGCACCTaGCTTCGCAAGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLSSCT*LRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCAGCCGCAGCCGCAGTaGTTCATTGGCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVQPQPQ*FIGLQL
Trigger: CAGCTGAAGGCCAATGAAGCACTGCGGCTGCGGCTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCAGCAGCTGCCGCTaGTGCTCACCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSSCR*CSPCSV
Trigger: GACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCTGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCGGCATCCTCCTCTaGCAACTGCCTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGGILL*QLPLPL
Trigger: AAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTTGAGTGCAATCTCTaGCTCCGTCTTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAFECNL*LRLEPC
Trigger: ACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILCSAA*SSRRRR
Trigger: GCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTCCAGTTCCGCCTaGTCCTTGCTGCGCATTGTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASSSA*SLLRIV
Trigger: CACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCTCTGCTCCTCCTCTaGCGCCAACTGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPLLLL*RQLPLP
Trigger: CGGCAGCGGCAGTTGGCGGCAGAGGAGGAGCAGAGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAFSSA*SRFWAA
Trigger: GGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTTGCGCAGCTTCTCTaGGGCCGCCTGCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILAQLL*GRLRLS
Trigger: GCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCATCTCCGCGTCGGCTaGCTGCTTCTGTTTCAGCGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVHLRVG*LLLFQR
Trigger: GCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGGGCAAGCTCCTTCTaGTGCTGCAGCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVWASSF*CCSSSA
Trigger: GGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGAGAGGAAGCTCTTCTaGAGGGCCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVERKLF*RAWVSC
Trigger: GCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCACGCAGCTGCTTTaGTTTAGCCACCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLTQLL*FSHLVL
Trigger: CAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCTGTTCCATCTGCTaGTGCTGCCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSCSIC*CCRCCS
Trigger: GGAGCAGCAGCGGCAGCAGCAGCAGATGGAACAGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTTTCCTGTTCCATCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRFSCSI*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGATGGAACAGGAAAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGGCCATCAGCTCCTaGTTTTCCTGTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLAISS*FSCSIC
Trigger: GCAGATGGAACAGGAAAAGCAGGAGCTGATGGCCAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCAGTTCCTCTTGCTTaGGCCTCACGCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAVPLA*ASRPPQ
Trigger: CTGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCTGCTGCCGCTGCTaGTCCAGATGCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCCCRC*SRCCSS
Trigger: GGAACTGCAGCATCTGGAGCAGCAGCGGCAGCAGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCCTGTGCCAAACGCTaGAGTTCCTCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPCAKR*SSSWLR
Trigger: CCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTAACAGTCCTGCAATaGTGCTGCGGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVTVLQ*CCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKELAKR*RHGGLF
Trigger: GAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVELAKR*RHGGLF
Trigger: GAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSELAKR*RHGGLF
Trigger: GAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGCCCGTGCGGAACTaGTGCAGCAGGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWPVRN*CSRSRR
Trigger: GCGACGGGACCTGCTGCAGCAGTTCCGCACGGGCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACTGTCCAGCAGCTCTaGGGCGGGCACGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITVQQL*GGHEGT
Trigger: CGTGCCCTCGTGCCCGCCGCAGAGCTGCTGGACAGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCAGGGCCTCATAGATaGTCAGCTTCTGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSGPHR*SASALL
Trigger: AAGCAGGGCAGAAGCTGAGCATCTATGAGGCCCTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCAGGGCCTCATAGATaGTCAGCTTCTGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSGPHR*SASALL
Trigger: AAGCAGGGCAGAAGCTGAGCATCTATGAGGCCCTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACTCCTGCCGCTaGTCCTCAGTAAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSNSCR*SSVKYS
Trigger: TGAATACTTTACTGAGGAGCAGCGGCAGGAGTTGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVKDSLS*RRVSTS
Trigger: GGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGGATCATGTTTGACTaGATCACCTCCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGIMFD*ITSHRD
Trigger: GTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGGGGTCCACGTAGCTaGGCACCTCGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRGPRS*APRWAP
Trigger: CGGAGCCCAGCGAGGTGCGCAGCTACGTGGACCCCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCGGAAGGTCAGCTTaGGGGCATCAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRGRSA*GHQRAA
Trigger: TGCTGCTCTCTGATGCCCGCAAGCTGACCTTCCGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPSRNF*RFLVTS
Trigger: GGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPSRNF*RFLVTS
Trigger: GGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTCCAGCAGACGGATaGCATGGTCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPPADG*HGPSGS
Trigger: TGATCCTGAAGGACCATGGCATCCGTCTGCTGGAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACACAGACATCTCCTTaGCCGTCTCTGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTQTSP*PSLGPQ
Trigger: TTGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACACAGACATCTCCTTaGCCGTCTCTGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTQTSP*PSLGPQ
Trigger: TTGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACACAGACATCTCCTTaGCCGTCTCTGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTQTSP*PSLGPQ
Trigger: TTGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGAAGCCACCGGCATTaGCTGAGAGCATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGSHRH*LRACQQ
Trigger: TTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACATCTTGGTCTTGGTaGGTGGGTCCTCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTSWSW*VGPQTH
Trigger: GTGGGTTTGAGGACCCACGCACCAAGACCAAGATGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACATCTTGGTCTTGGTaGGTGGGTCCTCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTSWSW*VGPQTH
Trigger: GTGGGTTTGAGGACCCACGCACCAAGACCAAGATGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCACAGTGCCACGTTaGAGAGCTTCGTCGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSTVPR*RASSRD
Trigger: GTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCCCTCCTCCACCATaGTACGGTCCAGAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCPPPP*YGPERP
Trigger: AGGACGCTCTGGACCGTAGCATGGTGGAGGAGGGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCTGTAGTAGCCCTTaGTGGACTGTGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGCSSP*WTVPQP
Trigger: AGGCTGCGGCACAGTCCAGCAAGGGCTACTACAGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGGGCTTGTGCCGGTaGATGATAGCATTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMGLCR*MIALKR
Trigger: TCTCTTCAATGCTATCATCCACCGGCACAAGCCCAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTAGGTTCTCCAGGTTaGTCTGTCGATACACTTTAT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLGSPG*SVDTLY
Trigger: ATAAAGTGTATCGACAGACCAACCTGGAGAACCTAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTAGGTTCTCCAGGTTaGTCTGTCGATACACTTTAT +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLGSPG*SVDTLY
Trigger: ATAAAGTGTATCGACAGACCAACCTGGAGAACCTAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCACCGAGAATGCCTaGTCTAGGTTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRATENA*SRFSRL
Trigger: CAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTTTGTCTGCCTCCTTaGCAGGAAGTTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWFCLPP*QEVLSP
Trigger: AGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGTAGGGCGTCCGCCTaGTTCAGCTGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSRASA*FSCSSH
Trigger: GTGTGAGGAGCAGCTGAACCAGGCGGACGCCCTACT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCTQCG*LPGAHA
Trigger: TGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAGSAV*SPLALG
Trigger: GCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGGTGGCTGCCCAGCTaGGCCTCCACACTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRWLPS*ASTLGK
Trigger: CTTGCCCAGTGTGGAGGCCCAGCTGGGCAGCCACCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGTAGGCACCCCGGGTaGCAGGGGAGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGRHPG*QGRAGS
Trigger: AGAGCCAGCTCTCCCCTGCCACCCGGGGTGCCTACC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTGGGP*RSSAAL
Trigger: CAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTGTCCCCTGTGTTCTaGATCTCCTTGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLSPVF*ISLIFF
Trigger: AAAGAAAATCAAGGAGATCCAGAACACAGGGGACAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTGGGCCGGGCAGGATaGTCTTCCCGCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVGRAG*SSRSSL
Trigger: CAGGCTGCTGCGGGAAGACCATCCTGCCCGGCCCAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGTTCCTTCTCATCCTaGGCATCCTGCAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCSFSS*ASCSRS
Trigger: GGATCTGCTGCAGGATGCCCAGGATGAGAAGGAACA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGTTCCTTCTCATCCTaGGCATCCTGCAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCSFSS*ASCSRS
Trigger: GGATCTGCTGCAGGATGCCCAGGATGAGAAGGAACA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCAGGACCCACCAGCTaGCATTGGTCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAGPTS*HWSPLC
Trigger: GCACAAGGGTGACCAATGCCAGCTGGTGGGTCCTGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTTTCTCCAGGTAGATaGCAGACAGGCTTCGGACCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVSPGR*QTGFGP
Trigger: AGGTCCGAAGCCTGTCTGCCATCTACCTGGAGAAAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTTTCTCCAGGTAGATaGCAGACAGGCTTCGGACCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVSPGR*QTGFGP
Trigger: AGGTCCGAAGCCTGTCTGCCATCTACCTGGAGAAAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTCAGCTGCTCCTCATaGGTTTTAAGCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWFSCSS*VLSTSS
Trigger: TGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCAAGCTCTTGGAGAGTaGCAGGCACAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVQALGE*QAQPGP
Trigger: AGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTATTGGCACGGCCTaGATCTGCTCTTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAIGTA*ICSCRL
Trigger: GAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGAACTTGATATACTaGCTCGTGAGCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMNLIY*LVSVVS
Trigger: GCTGACCACGCTCACGAGCCAGTATATCAAGTTCAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATGAACTTGATATACTaGCTCGTGAGCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQMNLIY*LVSVVS
Trigger: GCTGACCACGCTCACGAGCCAGTATATCAAGTTCAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCGCAGTGCTTCATTaGCCTTCAGCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAAVLH*PSAASA
Trigger: AGCGCTGGCAGCTGAAGGCCAATGAAGCACTGCGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCTGCGTGGCTGCGGTaGCCTCGTGCTGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISAWLR*PRAVAG
Trigger: CCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISRAAS*AATLNR
Trigger: ACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTCCAGAGTCCTCTaGAAACCCTGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASRVL*KPCVSS
Trigger: AGAGGAGACACAGGGTTTCCAGAGGACTCTGGAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRRSAS*SLCCRW
Trigger: CCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTAGCCACCTCGTCCTaGAAGAGCTGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLATSS*KSCSSL
Trigger: CAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVWKRPG*WRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCTGCAGTTCCTCCTaGCTCAGGATGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRCSSS*LRMPAS
Trigger: GGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCACAGGCACACGGTaGCTGTGCACAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSTGTR*LCTGSM
Trigger: CATTGATCCTGTGCACAGCCACCGTGTGCCTGTGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCCTTATCTGTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSLICE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCACAGATAAGGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACGGTGCAGACACGGTaGCCTTTTCGAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTVQTR*PFRRRH
Trigger: GTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPSKQS*PFRSCS
Trigger: GGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGCCACAGCCACCTCTaGCTGCAGCAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGHSHL*LQQVFL
Trigger: AAGAAAGACTTGCTGCAGCCAGAGGTGGCTGTGGCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTGGCTCCTGGGTGCTaGGGTCATGGTAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLAPGC*GHGRLW
Trigger: CCAGAGTCTACCATGACCCCAGCACCCAGGAGCCAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGTCCAGGAGCTCACTaGCCGGCACAGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRPGAH*PAQGHG
Trigger: TCCGTGCCCCTGTGCCGGCCAGTGAGCTCCTGGACG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGACATACAGACGTTaGTTCCGCACAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWTYRR*FRTGST
Trigger: GGTGGACCCTGTGCGGAACCAACGTCTGTATGTCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGACAGCAGCTTCTCATaGAGTTCAGGGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRDSSFS*SSGPTT
Trigger: CGTAGTGGGCCCTGAACTCCATGAGAAGCTGCTGTC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTGGAACAGCGAGATaGTGTTGCCCGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPGTAR*CCPSRD
Trigger: ATCCCTACTCGGGCAACACCATCTCGCTGTTCCAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTTGGTGTCATCACTTaGATCTGCCAGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALGVIT*ICQHTV
Trigger: AACCGTGTGCTGGCAGATCCAAGTGATGACACCAAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGAGCCGTTCCTTGGTaGCATCAACAAAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRAVPW*HQQRLR
Trigger: CCGGAGTCTTTGTTGATGCCACCAAGGAACGGCTCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGAGCCGTTCCTTGGTaGCATCAACAAAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRAVPW*HQQRLR
Trigger: CCGGAGTCTTTGTTGATGCCACCAAGGAACGGCTCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCGAGAGCCGTTCCTTaGTGGCATCAACAAAGACTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPRAVP*WHQQRL
Trigger: GAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCGAGAGCCGTTCCTTaGTGGCATCAACAAAGACTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPRAVP*WHQQRL
Trigger: GAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCGAGAGCCGTTCCTTaGTGGCATCAACAAAGACTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPRAVP*WHQQRL
Trigger: GAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCCTTCTTCATAGCCTaGTACACCGAGAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPFFIA*YTESRS
Trigger: GGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGTCAAAGAAACCCTTaGTGTCATCTGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGQRNP*CHLRDQ
Trigger: CTGATCCCTCAGATGACACCAAGGGTTTCTTTGACC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAACTCCAGGTACGTCTaGTGGTCAATGAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGANSRYV*WSMRPL
Trigger: CAAGGGTCTCATTGACCACCAGACGTACCTGGAGTT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSMSY*RPERRS
Trigger: CGACCGCCGCTCTGGTCGCCAGTATGACATCGACGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPQKAF*ARLIRS
Trigger: AGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPQKAF*ARLIRS
Trigger: AGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTTGGTCTTGGTGCGTaGGTCCTCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLGLGA*VLKPTE
Trigger: TTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTTGGTCTTGGTGCGTaGGTCCTCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLGLGA*VLKPTE
Trigger: TTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTTGGTCTTGGTGCGTaGGTCCTCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLGLGA*VLKPTE
Trigger: TTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTGACATCTTGGTCTTaGTGCGTGGGTCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLTSWS*CVGPQT
Trigger: GGTTTGAGGACCCACGCACCAAGACCAAGATGTCAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTGACATCTTGGTCTTaGTGCGTGGGTCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLTSWS*CVGPQT
Trigger: GGTTTGAGGACCCACGCACCAAGACCAAGATGTCAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGACATCTTGGTCTTaGTGCGTGGGTCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLTSWS*CVGPQT
Trigger: GGTTTGAGGACCCACGCACCAAGACCAAGATGTCAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTGACGCCGGGCACATaGGGATGCAGGCTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVTPGT*GCRLRG
Trigger: ACCCCGCAGCCTGCATCCCCATGTGCCCGGCGTCAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCACTGATGTGCCTCTaGGCCTTGATAAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASLMCL*ALIRCL
Trigger: CAAACACCTTATCAAGGCTCAGAGGCACATCAGTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000023226.13
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTTCCAGCAGGGAGATaGGGTTGTGGCCATCACGGA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLPAGR*GCGHHG
Trigger: TCCGTGATGGCCACAACCTCATCTCCCTGCTGGAAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTCACCTGAATGTCTaGGATCTGGAAGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAHLNV*DLEVQD
Trigger: ATCCTGCACTTCCAGATCTCAGACATTCAGGTGAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTCACCTGAATGTCTaGGATCTGGAAGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAHLNV*DLEVQD
Trigger: ATCCTGCACTTCCAGATCTCAGACATTCAGGTGAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGACTTTTCATCAGGCTaGGGGACGTCCACATCTTCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSDFSSG*GTSTSS
Trigger: AGAAGATGTGGACGTCCCTCAGCCTGATGAAAAGTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCGTACAGGGATaGAACATAGGTGATGATGGA +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSIVQG*NIGDDG
Trigger: TCCATCATCACCTATGTTTCATCCCTGTACGATGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTGCTCACAATGCGCTaGAGACACTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLLTMR*RHSSLS
Trigger: TGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACTTCCCCAGCTCGCTaGGCCACCTTGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITSPAR*ATLPEA
Trigger: GGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGGTCTGCACATCATTaGACAACAGCCGGATCATAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGSAHH*TTAGSY
Trigger: GTATGATCCGGCTGTTGTTCAATGATGTGCAGACCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGGTCTGCACATCATTaGACAACAGCCGGATCATAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGSAHH*TTAGSY
Trigger: GTATGATCCGGCTGTTGTTCAATGATGTGCAGACCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGGTCTGCACATCATTaGACAACAGCCGGATCATAC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGSAHH*TTAGSY
Trigger: GTATGATCCGGCTGTTGTTCAATGATGTGCAGACCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAATTCCTCTATAGACTaGTGCATGCCTCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKNSSID*CMPRWL
Trigger: CAGCCACCGAGGCATGCATCAGTCTATAGAGGAATT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAATTCCTCTATAGACTaGTGCATGCCTCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSNSSID*CMPRWL
Trigger: CAGCCACCGAGGCATGCATCAGTCTATAGAGGAATT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTGGTGCCACAGTGTaGCCAGGGCCTGATGCTGCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAGATV*PGPDAA
Trigger: CGCAGCATCAGGCCCTGGTCACACTGTGGCACCAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCAACCTTCTCACCATaGCGCTCAATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSTFSP*RSISSS
Trigger: GCTGGAGGAGATTGAGCGTCATGGTGAGAAGGTTGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCCAGCTCGCTCTCTaGTGCCTTGCGCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILQLAL*CLAQLG
Trigger: GCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGAGCTGGCTGTAGGTaGCTGGCTCCTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGAGCR*LAPGCW
Trigger: CCAGCACCCAGGAGCCAGTCACCTACAGCCAGCTCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGACAGCTCTTTGACTaGTGTCTTGCCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGQLFD*CLAILE
Trigger: CTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGACAGCTCTTTGACTaGTGTCTTGCCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGQLFD*CLAILE
Trigger: CTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCACTACGCCCGCCTTaGCAGCCTCATGGACATACA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPLRPP*QPHGHT
Trigger: TGTATGTCCATGAGGCTGTCAAGGCGGGCGTAGTGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACAGGTCTTCGGCAGTaGGGCGGCGGCGCACGTAGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITGLRQ*GGGARS
Trigger: ACTACGTGCGCCGCCGCCTCACTGCCGAAGACCTGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACATGGCCTGGAAGAGTaGGATGGTCTGTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRHGLEE*DGLFRV
Trigger: TACACGGAACAGACCATCTCACTCTTCCAGGCCATG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTGTGGCCTCGTCCATaGCTTGAGAGCGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLWPRP*LESVPA
Trigger: AGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTSGGQ*DPCGRP
Trigger: AGGCCTACCGCAAGGGTCTCATTGACCACCAGACGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVLVQC*AVNEVL
Trigger: AAGAACCTCATTGACCGCTCAGCACTGGACCAGTAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACTTGGAGTAAGCACTaGCATCACGCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTWSKH*HHAASG
Trigger: CCCAGAAGCTGCGTGATGTCAGTGCTTACTCCAAGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTGAGCTGGTTCTCTTaGTACCCAGGCCTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLSWFS*YPGLPA
Trigger: AGCCGGAAGGCCTGGGTAGCAAGAGAACCAGCTCAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023226.13
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGGTCAGCTTGGGGTTaGCGTCAGCAATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGSAWG*RQQCHH
Trigger: ATGATGACATTGCTGACGGCAACCCCAAGCTGACCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTGAGATCTGGAAGTaGAGGATGATTGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSEIWK*RMIVQM
Trigger: CATCTGGACAATCATCCTGCACTTCCAGATCTCAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCTCACTCCGTCCTGTaGACCAGGCACGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPHSVL*TRHAGH
Trigger: ATGCCCCGCGTGCCTGGTGCACAGGACGGAGTGAGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCTGGAGGGGAACTTaGGCTCCTCAAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSWRGT*APQKQR
Trigger: CCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTGGCCCGCTTGTACTaGCCCCTCCAAAGACTGGTA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLARLY*PLQRLV
Trigger: TACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCAGGATGGCCACATaGAGCTTGCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSRMAT*SLPHSF
Trigger: GAAGGAGTGGGGCAAGCTGCATGTGGCCATCCTGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTAGCTTGCTCACAATaGGCTGAAGACACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVACSQ*AEDTPA
Trigger: GGCTGGAGTGTCTTCAGCGCATTGTGAGCAAGCTAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCSPCG*RPSLRV
Trigger: GACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGGCTQ*GWLPGA
Trigger: AGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCGCCACAAACCCGTaGAAGCTCTCCAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAATNP*KLSRDR
Trigger: CCGGTCCCTGGAGAGCTTGCACGGGTTTGTGGCGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCAAGTGTGCTTCAATaGAGCAACACAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSVLQ*SNTAAA
Trigger: TGCTGCAGCTGTGTTGCTGCATTGAAGCACACTTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCATCCTGGGCATCCTaGAGCAGATCCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSWAS*SRSSSL
Trigger: CAGGCTCGAGGATCTGCTGCAGGATGCCCAGGATGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTCCTGCTCACCCTaGTCCAGGCTTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSCSP*SRLCSN
Trigger: GTTACTACAAAGCCTGGAGCAGGGTGAGCAGGAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCATAGTCCTTGATTaGATTGATGTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLIVLD*IDVLLS
Trigger: GCTAAGCAGTACATCAATGCAATCAAGGACTATGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTCTGCCCGCTGTTaGTCAGCCAGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSARC*SASRSS
Trigger: GGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRATSS*MRRCSS
Trigger: AGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGGATGCTGCGCTTCTaGTGCTGTGCGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVWMLRF*CCASTA
Trigger: AGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTCCTCTTGGATGCTaGGCTTCTGCTGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAPLGC*ASAAVR
Trigger: ACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCATCCGGCTGCGTTCTaGAGCCTCCACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIHPAAF*SLHLLG
Trigger: GCCCAGCAGGTGGAGGCTGCAGAACGCAGCCGGATG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISAPPR*RSVVSS
Trigger: GCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGQLCL*LPFALA
Trigger: AGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACGCAGGGCCAGCTCTaGCTCTGCCTGCCGTTTGCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITQGQL*LCLPFA
Trigger: CGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIHLHLA*PLCLGL
Trigger: CAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVSRAT*TWRARS
Trigger: AGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTCCGCACTGCGCTGTaGCGTCTCCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIFRTAL*RLQGHL
Trigger: CAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAPLPH*AVPSPG
Trigger: CCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGGGCCACTGTTACATaGTCCTCCTGCAGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVWATVT*SSCRVR
Trigger: GCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCAGCTTGCTGCTGTaGCCGTCGCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILSLLL*PSLGLL
Trigger: GAGGAGGCCGAGCGACGGGCACAGCAGCAAGCTGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCTCAGCCTCAGCTTaGTGCTGTGCCCGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRSASA*CCARRS
Trigger: CGAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCACCTCTTCTGCCTaGAGCCGCAGCCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIATSSA*SRSRSA
Trigger: AGCACTGCGGCTGCGGCTGCAGGCAGAAGAGGTGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGTGCCAGGCTCTTCTaGTGTGCCACCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCARLF*CATSSA
Trigger: GGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCTGCTGCTCACCTTaGTCTGTCTCGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRCCSP*SVSARR
Trigger: CCTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTTGAGTGCAATCTCTaGCTCCGTCTTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKFECNL*LRLEPC
Trigger: ACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCCTTCTCTTTGAGTaGAATCTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALLLFE*NLCLRL
Trigger: AAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRSLMP*AAGPGA
Trigger: AGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATCTCCTCCTCCACCTaGCGCCGCTGTCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIISSST*RRCRRV
Trigger: CACCCTGCGACAGCGGCGGCAGGTGGAGGAGGAGAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCGCGTTGCTGCGAATaGGCCCCAGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPRCCE*APAPAP
Trigger: TGGAGCTGGAGCTGGGGCGCATTCGCAGCAACGCGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGTGCCACCTTGCGCTaGCGAGCGGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISATLR*RAASSS
Trigger: GGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPAPLP*AASLRP
Trigger: CGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTGCAAACTTTTTATaGTTCTCCATCTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSANFL*FSISAS
Trigger: CGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCTGCAAACTTTTTATaGTTCTCCATCTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSANFL*FSISAS
Trigger: CGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCGGAGTGTCTGCTCTaGAAACTTTTTATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPECLL*KLFMLL
Trigger: GAGAAGCATAAAAAGTTTGCAGAGCAGACACTCCGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCGGAGTGTCTGCTCTaGAAACTTTTTATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPECLL*KLFMLL
Trigger: GAGAAGCATAAAAAGTTTGCAGAGCAGACACTCCGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTCTGCCGGAGTGTCTaGTCTGCAAACTTTTTATGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWFCRSV*SANFLC
Trigger: GCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGTGTGGTCAGCTCCTaGTCTACCTGGGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSVVSS*STWAFC
Trigger: GCAGAAGGCCCAGGTAGAGCAGGAGCTGACCACACT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATCTCCAGCTGCCGCTaGCGCTCGGCCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIISSCR*RSASRV
Trigger: GACTCTGGAGGCCGAGCGGCAGCGGCAGCTGGAGAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCATCGTGGTCACTCTaGTGTCGCTGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASWSL*CRWISS
Trigger: GCTGGAGATCCAGCGACAGCAGAGTGACCACGATGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATGAAGCGCTCGCGCTaGAGCAGGCTGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVMKRSR*SRLSFS
Trigger: TGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPPGSG*LLPVAA
Trigger: AGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTGGGTCAGACAAGATaGGGTTCATCTCTTCATCGA +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLGQTR*GSSLHR
Trigger: TCGATGAAGAGATGAACCGCATCTTGTCTGACCCAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCCGTGCGGAACTGCTaGAGCAGGTCCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPVRNC*SRSRRC
Trigger: ACAGCGACGGGACCTGCTGCAGCAGTTCCGCACGGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCAGGGCCTCATAGATaGTCAGCTTCTGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSGPHR*SASALL
Trigger: AAGCAGGGCAGAAGCTGAGCATCTATGAGGCCCTGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCAACTCCTGCCGCTaGTCCTCAGTAAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASNSCR*SSVKYS
Trigger: TGAATACTTTACTGAGGAGCAGCGGCAGGAGTTGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCCGCAGCAACTCCTaGCGCTGCTCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCRSNS*RCSSVK
Trigger: CTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGGATCATGTTTGACTaGATCACCTCCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGIMFD*ITSHRD
Trigger: GTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGGATCATGTTTGACTaGATCACCTCCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGIMFD*ITSHRD
Trigger: GTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGGATCATGTTTGACTaGATCACCTCCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGIMFD*ITSHRD
Trigger: GTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGGGPQ*LLWLAA
Trigger: CGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACACAGACATCTCCTTaGCCGTCTCTGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTQTSP*PSLGPQ
Trigger: TTGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCGGGCATCCACAGTaGCACGTTGCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCGHPQ*HVAELR
Trigger: ACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCCTTGCTGGACTGTaGCGCAGCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIALAGL*RSLQQP
Trigger: AGGCTGCTGGAGGCTGCGGCACAGTCCAGCAAGGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCTCTGCCCTCCAGTaGTTGATAAGGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASALQ*LIRCLL
Trigger: CAACAAACACCTTATCAAGCACTGGAGGGCAGAGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACATTCTGCAGCTTGTaGAAGCGCATCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTFCSL*KRILPF
Trigger: GAAAGGGAGGATGCGCTTCCACAAGCTGCAGAATGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACATTCTGCAGCTTGTaGAAGCGCATCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTFCSL*KRILPF
Trigger: GAAAGGGAGGATGCGCTTCCACAAGCTGCAGAATGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACATTCTGCAGCTTGTaGAAGCGCATCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTFCSL*KRILPF
Trigger: GAAAGGGAGGATGCGCTTCCACAAGCTGCAGAATGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCAATCTCTTCAAAGCTaGAGGGGAACTTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSQSLQS*RGTCAP
Trigger: AGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCAATCTCTTCAAAGCTaGAGGGGAACTTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKQSLQS*RGTCAP
Trigger: AGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAATCTCTTCAAAGCTaGAGGGGAACTTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQSLQS*RGTCAP
Trigger: AGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTTTGTCTGCCTCCTTaGCAGGAAGTTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAFCLPP*QEVLSP
Trigger: AGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTGGGCCTCCACACTaGGCAAGTCCACGCCCCACT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAGPPH*ASPRPT
Trigger: AGTGGGGCGTGGACTTGCCCAGTGTGGAGGCCCAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGTAACTTTCTTTCTTaGCTGCCATGTTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSNFLS*LPCWYC
Trigger: GCAATACCAACATGGCAGCCAAGAAAGAAAGTTACT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGTTCCTTCTCATCCTaGGCATCCTGCAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCSFSS*ASCSRS
Trigger: GGATCTGCTGCAGGATGCCCAGGATGAGAAGGAACA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCCACCAGCTGGCATTaGTCACCCTTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPTSWH*SPLCTV
Trigger: GACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTTCCTGGGCCTCCTaGTTGGGCGGCGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASWAS*LGGGTR
Trigger: TCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGAAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTAGCGACAGCTTCCTaGGCCTCCTGGTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILATAS*ASWLGG
Trigger: GCCGCCCAACCAGGAGGCCCAGGAAGCTGTCGCTAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTTTCTCCAGGTAGATaGCAGACAGGCTTCGGACCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVSPGR*QTGFGP
Trigger: AGGTCCGAAGCCTGTCTGCCATCTACCTGGAGAAAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTCAGCTGCTCCTCATaGGTTTTAAGCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAFSCSS*VLSTSS
Trigger: TGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVAGTA*ASFSCS
Trigger: GGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCCGCACATCTGTCTaGGCTAGAACAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCRTSV*ARTACQ
Trigger: CTGGCAGGCTGTTCTAGCCCAGACAGATGTGCGGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIALAAS*HPAARR
Trigger: GCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATGAACTTGATATACTaGCTCGTGAGCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAMNLIY*LVSVVS
Trigger: GCTGACCACGCTCACGAGCCAGTATATCAAGTTCAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISASSS*RFCVAA
Trigger: CGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGATGCCTTGCGCAGCTaGGCCAGGCGCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIDALRS*ARRSSM
Trigger: CATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSLCCR*ISSVCT
Trigger: GGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCTTCTGCAGGGCCTaGGTCTCCTGCAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLFCRA*VSCSIC
Trigger: GCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCTCTCGCAGCCGCTaGTTTTCCTCCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRSRSR*FSSARS
Trigger: GCTCCTGGCGGAGGAAAACCAGCGGCTGCGAGAGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGGCAGTGCCTTCGTaGAAGCGGCCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWAVPS*KRPGWW
Trigger: CCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSVSHW*ASVTVL
Trigger: CAGGACTGTTACTGAAGCCCACCAATGAGAAACTGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSVSHW*ASVTVL
Trigger: CAGGACTGTTACTGAAGCCCACCAATGAGAAACTGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCACTCAGTTTCTCATTaGTGGGCTTCAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQHSVSH*WASVTV
Trigger: GACTGTTACTGAAGCCCACCAATGAGAAACTGAGTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCAGGCGGACGCCATaGTCCCTGACAATAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSRRTP*SLTIRS
Trigger: GGACCTTATTGTCAGGGACCATGGCGTCCGCCTGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTCACGGTCCTGCCCTaGAACTTGCCAAACGGTGCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVTVLP*NLPNGA
Trigger: TGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGAGGCCCCGGCGCATaGCCTCATAGATGGTTACTT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGGPGA*PHRWLL
Trigger: AAGTAACCATCTATGAGGCCATGCGCCGGGGCCTCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCCTTTTTCATGGCCTaGAACAGCGAGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPFFMA*NSEMVL
Trigger: CAACACCATCTCGCTGTTCCAGGCCATGAAAAAGGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCCTTTTTCATGGCCTaGAACAGCGAGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPFFMA*NSEMVL
Trigger: CAACACCATCTCGCTGTTCCAGGCCATGAAAAAGGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCCTTTTTCATGGCCTaGAACAGCGAGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPFFMA*NSEMVL
Trigger: CAACACCATCTCGCTGTTCCAGGCCATGAAAAAGGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTTGGTGTCATCACTTaGATCTGCCAGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLGVIT*ICQHTV
Trigger: AACCGTGTGCTGGCAGATCCAAGTGATGACACCAAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTTGGTGTCATCACTTaGATCTGCCAGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLGVIT*ICQHTV
Trigger: AACCGTGTGCTGGCAGATCCAAGTGATGACACCAAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCTGCCCCTTTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILCPFE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCAAAGGGGCAGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGAGGCCAGGTTCTGCTaGCGGATGATCTCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVEARFC*RMISVF
Trigger: GAAGACCGAGATCATCCGCCAGCAGAACCTGGCCTC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCGCTCCCCCTTCACTaGGTCCAGCAGGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPLPLH*VQQEAR
Trigger: ACGGGCTTCCTGCTGGACCCAGTGAAGGGGGAGCGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACCTCCAGAGGGAGGTaGAAACCCAGGCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITSRGR*KPRRGS
Trigger: GGACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCTGCGCACCTCGCTaGGCTCCGACAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISCAPR*APTAGR
Trigger: ACGACCAGCTGTCGGAGCCCAGCGAGGTGCGCAGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGAGCCGTTCCTTGGTaGCATCAACAAAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRAVPW*HQQRLR
Trigger: CCGGAGTCTTTGTTGATGCCACCAAGGAACGGCTCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCGAGAGCCGTTCCTTaGTGGCATCAACAAAGACTC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPRAVP*WHQQRL
Trigger: GAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCAGACGGATGCCATaGTCCTTCAGGATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSRRMP*SFRIRP
Trigger: GGGCCTGATCCTGAAGGACCATGGCATCCGTCTGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAACTCCAGGTACGTCTaGTGGTCAATGAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSNSRYV*WSMRPL
Trigger: CAAGGGTCTCATTGACCACCAGACGTACCTGGAGTT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAACTCCAGGTACGTCTaGTGGTCAATGAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVNSRYV*WSMRPL
Trigger: CAAGGGTCTCATTGACCACCAGACGTACCTGGAGTT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAACTCCAGGTACGTCTaGTGGTCAATGAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKNSRYV*WSMRPL
Trigger: CAAGGGTCTCATTGACCACCAGACGTACCTGGAGTT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPQKAF*ARLIRS
Trigger: AGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTGACATCTTGGTCTTaGTGCGTGGGTCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLTSWS*CVGPQT
Trigger: GGTTTGAGGACCCACGCACCAAGACCAAGATGTCAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGGCAGCTGACATCTTaGTCTTGGTGCGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGQLTS*SWCVGP
Trigger: AGGACCCACGCACCAAGACCAAGATGTCAGCTGCCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGAAGCCAGAGCCAGTaGCATCAAAGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRSQSQ*HQSCHA
Trigger: GGCGTGGCAGCTTTGATGCCACTGGCTCTGGCTTCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCAGGGTCCTCAGCTaGCAGAGGCCCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGRVLS*QRPPLW
Trigger: CCAAAGAGGGGGCCTCTGCCAGCTGAGGACCCTGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCACTGATGTGCCTCTaGGCCTTGATAAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSLMCL*ALIRCL
Trigger: CAAACACCTTATCAAGGCTCAGAGGCACATCAGTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000023226.13
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLYHTL*PQQQLL
Trigger: GAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCATCGTACAGGGATaGAACATAGGTGATGATGGA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASIVQG*NIGDDG
Trigger: TCCATCATCACCTATGTTTCATCCCTGTACGATGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGAAGTTCTGTCTCCTTaGACTTCAAAAACTGGCACC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAEVLSP*TSKTGT
Trigger: GGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCTCCGATCCAGACTaGACCTTGGGCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLSDPD*TLGFLA
Trigger: TGCCAAGAAGCCCAAGGTTCAGTCTGGATCGGAGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGTTCAGCTTCCTCCTaGGCCTGCCGCTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRSASS*ACRFCA
Trigger: AGCGCAGAAGCGGCAGGCTCAGGAGGAAGCTGAACG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCGTGTGGCCTCACTaGTGGCAGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAVWPH*WQPASQ
Trigger: CTGAGAAGCTGGCTGCCATCAGTGAGGCCACACGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVMFCSC*SVCCSS
Trigger: GGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCAGCCACCGTGGTGTaGCCCTGTGCCAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISATVV*PCAKRC
Trigger: GCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGTCCTTGTAGCCGGTaGCGGCACGCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGPCSR*RHAQLT
Trigger: TGTCAGCTGAGCGTGCCGTCACCGGCTACAAGGACC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGCAGCCTTATCTGTaGGTGGCAGGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWQPYL*VAGGAG
Trigger: GCCTGCGCCTCCTGCCACTCACAGATAAGGCTGCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCAAACTGAGCTCTGCTaGGGATCTTGGCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVQTELC*GSWRPG
Trigger: TCCTGGACGCCAAGATCCTCAGCAGAGCTCAGTTTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCCGGGATCATGTTTaGCTGCATCACCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLRDHV*LHHLPQ
Trigger: CTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGTGCGTGTCCTTATTaGGGTAGCCGCGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRACPY*GSRVGK
Trigger: CTTACCAACGCGGCTACCTCAATAAGGACACGCACG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCGTCTGGGGGTCAGTaGTGCAGCGCTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPSGGQ*CSAPSA
Trigger: AGCTGATGGAGCGCTGCATCACTGACCCCCAGACGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTTGACGACGCCATCTaGGGAGGAGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLDDAI*GGDGDL
Trigger: GAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCAGTGCTGGGGTCAATaGTGCCCCCGGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIQCWGQ*CPRCRL
Trigger: AAGCCTGCACCGGGGGCATCATTGACCCCAGCACTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTTGTAGGAGATCTTaGGCTTGGTCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPCRRS*AWSWGT
Trigger: CGTGCCCCAAGACCAAGCTCAAGATCTCCTACAAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTTCGTACAGGTCACTaGTGTGCCTCTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLRTGH*CASEPL
Trigger: CAGAGGCTCAGAGGCACATCAGTGACCTGTACGAAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGTGAAAGTTTTCTTCTaGACACGGTCTCGTTCATCT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWVKVFF*TRSRSS
Trigger: AGATGAACGAGACCGTGTGCAGAAGAAAACTTTCAC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCCAGGTCCCGCTCTaGCACCGAGAATGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISQVPL*HRECLV
Trigger: GACCAGGCATTCTCGGTGGCAGAGCGGGACCTGGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGGTGCCGGATCCATTaGAGCAGCAGCAACACAAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVWCRIH*SSSNTS
Trigger: GCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGGCCACATGCAGCTTaGCCCACTCCTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVWPHAA*PTPSPH
Trigger: ATGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCATCTTTAAGGGTCTaGACATCATTGAACAACAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPSLRV*TSLNNS
Trigger: GCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCAAGTGTGCTTCAATaGAGCAACACAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSVLQ*SNTAAA
Trigger: TGCTGCAGCTGTGTTGCTGCATTGAAGCACACTTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCAAGTGTGCTTCAATaGAGCAACACAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSVLQ*SNTAAA
Trigger: TGCTGCAGCTGTGTTGCTGCATTGAAGCACACTTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVSCSF*NCSSAS
Trigger: GGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCATTGGTCACCCTTGTaGACAGTCACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVHWSPL*TVTSTC
Trigger: GCAGGTGGAGGTGACTGTGCACAAGGGTGACCAATG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGSRRR*TVRVSQ
Trigger: CTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISVAQR*AGRTPV
Trigger: CACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGACCTGTTCCAGCTTaGCCAGGGTCAGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGPVPA*PGSVPT
Trigger: AGTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCACGGCCTGGATCTaGTCTTGCCGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGTAWI*SCRLLA
Trigger: TGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISASCR*FSSAAS
Trigger: GGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCTGCAGCCTCCACCTaGTGGGCCTTGGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISAAST*WALAWI
Trigger: GATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCGGCCTCCTCGGCCTaGAGTCTCAGCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISASSA*SLSSSR
Trigger: CCTGGATGAGCTGAGACTGCAGGCCGAGGAGGCCGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILGIGL*QALLLC
Trigger: GCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISANCL*LLASSA
Trigger: GGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCCTTCTCTTTGAGTaGAATCTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLLLFE*NLCLRL
Trigger: AAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCCTTCTCTTTGAGTaGAATCTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLLLFE*NLCLRL
Trigger: AAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILLFQR*LLCLGP
Trigger: CGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCGGAGTGTCTGCTCTaGAAACTTTTTATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPECLL*KLFMLL
Trigger: GAGAAGCATAAAAAGTTTGCAGAGCAGACACTCCGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTCTGCCGGAGTGTCTaGTCTGCAAACTTTTTATGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAFCRSV*SANFLC
Trigger: GCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISTWLR*RAASVT
Trigger: GGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTTCCTGCACCGCCTaGATCTTCTCCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASCTA*IFSFSI
Trigger: GATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCGATCTCTTCAGCCTaGTTCCGGAAGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPISSA*FRKRWA
Trigger: CGCCCAGCGCTTCCGGAAGCAGGCTGAAGAGATCGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGGATCTCCAGCGTCTaGACCAACGTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVWISSV*TNVTFS
Trigger: GGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCTCCTCACGCAGCTaGTTTGCTTTAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCSSRS*FALATS
Trigger: CGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTTTCCTGTTCCATCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVFSCSI*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGATGGAACAGGAAAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTAACAGTCCTGCAATaGTGCTGCGGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVTVLQ*CCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTGGGTCAGACAAGATaGGGTTCATCTCTTCATCGA +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALGQTR*GSSLHR
Trigger: TCGATGAAGAGATGAACCGCATCTTGTCTGACCCAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCAACTCCTGCCGCTaGTCCTCAGTAAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSNSCR*SSVKYS
Trigger: TGAATACTTTACTGAGGAGCAGCGGCAGGAGTTGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCAACTCCTGCCGCTaGTCCTCAGTAAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSNSCR*SSVKYS
Trigger: TGAATACTTTACTGAGGAGCAGCGGCAGGAGTTGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCAACTCCTGCCGCTaGTCCTCAGTAAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSNSCR*SSVKYS
Trigger: TGAATACTTTACTGAGGAGCAGCGGCAGGAGTTGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCTCCTGTGGCTAGCTaGGCATCCAGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPPVAS*ASSSLS
Trigger: GCTGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCGGTGGCTGCCTGTaGTTCCAGGAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAGGCL*FQELKG
Trigger: GCCTTTGAGCTCCTGGAAGCACAGGCAGCCACCGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTCCAGCAGACGGATaGCATGGTCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPPADG*HGPSGS
Trigger: TGATCCTGAAGGACCATGGCATCCGTCTGCTGGAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCACCACGCGGCGCTTaGGCACTGAGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISPRGA*ALRTWR
Trigger: CCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGAAGCCACCGGCATTaGCTGAGAGCATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGSHRH*LRACQQ
Trigger: TTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCACAGTGCCACGTTaGAGAGCTTCGTCGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSTVPR*RASSRD
Trigger: GTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCAGCTTCTGGGCTGTaGGGGCATCCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAASGL*GHPQCH
Trigger: GTGGCACTGTGGATGCCCGCACAGCCCAGAAGCTGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTGAAAGTTTTCTTCTaGACACGGTCTCGTTCATCG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVKVFF*TRSRSS
Trigger: CGATGAACGAGACCGTGTGCAGAAGAAAACTTTCAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169108.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGGGAGATGAGGTTGTaGCCATCACGGAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVREMRL*PSRRSS
Trigger: CGAAGACCTCCGTGATGGCCACAACCTCATCTCCCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATGGGCTTGTGCCGGTaGATGATAGCATTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVMGLCR*MIALKR
Trigger: TCTCTTCAATGCTATCATCCACCGGCACAAGCCCAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATGGGCTTGTGCCGGTaGATGATAGCATTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSMGLCR*MIALKR
Trigger: TCTCTTCAATGCTATCATCCACCGGCACAAGCCCAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTAGGTTCTCCAGGTTaGTCTGTCGATACACTTTAT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLGSPG*SVDTLY
Trigger: ATAAAGTGTATCGACAGACCAACCTGGAGAACCTAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCACCGAGAATGCCTaGTCTAGGTTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVATENA*SRFSRL
Trigger: CAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACAATCTCTTCAAAGCTaGAGGGGAACTTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRQSLQS*RGTCAP
Trigger: AGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTGAACTTCAAAAACTaGCACCATAGGATCTCAATC +
Preference number: 4 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLNFKN*HHRISI
Trigger: GATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTGAACTTCAAAAACTaGCACCATAGGATCTCAATC +
Preference number: 4 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLNFKN*HHRISI
Trigger: GATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTTTGTCTGCCTCCTTaGCAGGAAGTTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVFCLPP*QEVLSP
Trigger: AGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCTCCCGCTCCAGGATaGCCACATGCAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISPAPG*PHAACP
Trigger: GGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCTQCG*LPGAHA
Trigger: TGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCTGCAGGGTCACCTaGGTCACAGGGGCACCCACT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILCRVT*VTGAPT
Trigger: AGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTGTCCCCTGTGTTCTaGATCTCCTTGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLSPVF*ISLIFF
Trigger: AAAGAAAATCAAGGAGATCCAGAACACAGGGGACAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTGTCCCCTGTGTTCTaGATCTCCTTGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLSPVF*ISLIFF
Trigger: AAAGAAAATCAAGGAGATCCAGAACACAGGGGACAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTCCAGTGGGATGGCTaGGCAGGACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIFQWDG*AGPTSW
Trigger: CCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCACCTTCCAGTGGGATaGCTGGGCAGGACCCACCAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIHLPVG*LGRTHQ
Trigger: CTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTGAGCACCTTCCAGTaGGATGGCTGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILSTFQ*DGWAGP
Trigger: GGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGVLIQ*QPQTVH
Trigger: GTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTCAGCTGCTCCTCATaGGTTTTAAGCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVFSCSS*VLSTSS
Trigger: TGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTCAGCTGCTCCTCATaGGTTTTAAGCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKFSCSS*VLSTSS
Trigger: TGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATCCAGACTGAACCTTaGGCTTCTTGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVIQTEP*ASWQGR
Trigger: CCTCCCCTGCCAAGAAGCCCAAGGTTCAGTCTGGAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATGAACTTGATATACTaGCTCGTGAGCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKMNLIY*LVSVVS
Trigger: GCTGACCACGCTCACGAGCCAGTATATCAAGTTCAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASSSA*ALAWAC
Trigger: ACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTCCAGAGTCCTCTaGAAACCCTGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASRVL*KPCVSS
Trigger: AGAGGAGACACAGGGTTTCCAGAGGACTCTGGAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTAGCCACCTCGTCCTaGAAGAGCTGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLATSS*KSCSSL
Trigger: CAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGASVSHW*ASVTVL
Trigger: CAGGACTGTTACTGAAGCCCACCAATGAGAAACTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACACTCAGTTTCTCATTaGTGGGCTTCAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAHSVSH*WASVTV
Trigger: GACTGTTACTGAAGCCCACCAATGAGAAACTGAGTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCACAGGCACACGGTaGCTGTGCACAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSTGTR*LCTGSM
Trigger: CATTGATCCTGTGCACAGCCACCGTGTGCCTGTGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACGGTGCAGACACGGTaGCCTTTTCGAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTVQTR*PFRRRH
Trigger: GTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCCACAGCCACCTCTaGCTGCAGCAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGHSHL*LQQVFL
Trigger: AAGAAAGACTTGCTGCAGCCAGAGGTGGCTGTGGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTGGCTGTAGGTGACTaGCTCCTGGGTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILAVGD*LLGAGV
Trigger: GACCCCAGCACCCAGGAGCCAGTCACCTACAGCCAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCAAGCCGGTCAGCTaGTCAGACCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILKPVS*SDRHRC
Trigger: ACAGCGGTGCCGGTCTGACCAGCTGACCGGCTTGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGACAGCAGCTTCTCATaGAGTTCAGGGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVDSSFS*SSGPTT
Trigger: CGTAGTGGGCCCTGAACTCCATGAGAAGCTGCTGTC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTGGAACAGCGAGATaGTGTTGCCCGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPGTAR*CCPSRD
Trigger: ATCCCTACTCGGGCAACACCATCTCGCTGTTCCAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCCTTTTTCATGGCCTaGAACAGCGAGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPFFMA*NSEMVL
Trigger: CAACACCATCTCGCTGTTCCAGGCCATGAAAAAGGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCAGGCCCTTTTTCATaGCCTGGAACAGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPGPFS*PGTARW
Trigger: CCATCTCGCTGTTCCAGGCCATGAAAAAGGGCCTGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCCTTCTTCATAGCCTaGTACACCGAGAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPFFIA*YTESRS
Trigger: GGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGTCAAAGAAACCCTTaGTGTCATCTGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGQRNP*CHLRDQ
Trigger: CTGATCCCTCAGATGACACCAAGGGTTTCTTTGACC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGTCAAAGAAACCCTTaGTGTCATCTGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGQRNP*CHLRDQ
Trigger: CTGATCCCTCAGATGACACCAAGGGTTTCTTTGACC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGACACAGGCCCGTCTaGGGGTCAGTGATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRHRPV*GSVMQR
Trigger: GCGCTGCATCACTGACCCCCAGACGGGCCTGTGTCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCAGGTACGTCTGGTaGTCAATGAGACCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSRYVW*SMRPLR
Trigger: CCGCAAGGGTCTCATTGACCACCAGACGTACCTGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAACTCCAGGTACGTCTaGTGGTCAATGAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRNSRYV*WSMRPL
Trigger: CAAGGGTCTCATTGACCACCAGACGTACCTGGAGTT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGACCAGGAGGCTAGCTaGGTCCTGGGGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIDQEAS*VLGPAE
Trigger: TTCTGCTGGCCCCAGGACCCAGCTAGCCTCCTGGTC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCTCCAGCAGCCGCTaGCCGGTGATGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASSSR*PVMLST
Trigger: GGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGACTGTCCGCTCACCTaGATGTCTGAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVDCPLT*MSEIWK
Trigger: CTTCCAGATCTCAGACATTCAGGTGAGCGGACAGTC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCATCGTACAGGGATaGAACATAGGTGATGATGGA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSIVQG*NIGDDG
Trigger: TCCATCATCACCTATGTTTCATCCCTGTACGATGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGAAGTTCTGTCTCCTTaGACTTCAAAAACTGGCACC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKEVLSP*TSKTGT
Trigger: GGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGAAGTTCTGTCTCCTTaGACTTCAAAAACTGGCACC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVEVLSP*TSKTGT
Trigger: GGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGAAGTTCTGTCTCCTTaGACTTCAAAAACTGGCACC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSEVLSP*TSKTGT
Trigger: GGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCCAGGGGGAATCTTaGGCTGGCCCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISQGES*AGPLVL
Trigger: CAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTGCTCACAATGCGCTaGAGACACTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLLTMR*RHSSLS
Trigger: TGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRCWNH*APSSGM
Trigger: CATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGTGTGACCAGGGCCTaGTGCTGCGCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISVTRA*CCASSL
Trigger: TAGACTGGAGGCGCAGCATCAGGCCCTGGTCACACT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCAACCTTCTCACCATaGCGCTCAATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSTFSP*RSISSS
Trigger: GCTGGAGGAGATTGAGCGTCATGGTGAGAAGGTTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGACGGCACGCTCAGCTaGCAGCAGTTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIDGTLS*QQFVVQ
Trigger: CTGCACCACAAACTGCTGTCAGCTGAGCGTGCCGTC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCATGGCCTGGAAGAGTaGGATGGTCTGTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVHGLEE*DGLFRV
Trigger: TACACGGAACAGACCATCTCACTCTTCCAGGCCATG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCTCGTCCATGACTTaGGAGCGTACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASSMT*ERTSSS
Trigger: GGAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAALAH*GLGGCL
Trigger: AAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVLVQC*AVNEVL
Trigger: AAGAACCTCATTGACCGCTCAGCACTGGACCAGTAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCGGCGGCCATAGCCTaGGGAAGAGTAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAAAIA*GRVGGR
Trigger: TCTTCCTCCTACTCTTCCTCAGGCTATGGCCGCCGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTGAAAGTTTTCTTCTaGACACGGTCTCGTTCATCT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVKVFF*TRSRSS
Trigger: AGATGAACGAGACCGTGTGCAGAAGAAAACTTTCAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGGTCAGCTTGGGGTTaGCGTCAGCAATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGSAWG*RQQCHH
Trigger: ATGATGACATTGCTGACGGCAACCCCAAGCTGACCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTGAGATCTGGAAGTaGAGGATGATTGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSEIWK*RMIVQM
Trigger: CATCTGGACAATCATCCTGCACTTCCAGATCTCAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTGAGATCTGGAAGTaGAGGATGATTGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSEIWK*RMIVQM
Trigger: CATCTGGACAATCATCCTGCACTTCCAGATCTCAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTAGCTTGCTCACAATaGGCTGAAGACACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVACSQ*AEDTPA
Trigger: GGCTGGAGTGTCTTCAGCGCATTGTGAGCAAGCTAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCATCTTTAAGGGTCTaGACATCATTGAACAACAGC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPSLRV*TSLNNS
Trigger: GCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCSPCG*RPSLRV
Trigger: GACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTACCAGGCGCTCATaGAGACGATACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIATRRS*RRYTLR
Trigger: CCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGGGGCACCCACTCCTaGCTTCAGCCGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRGTHS*LQPEVV
Trigger: TACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATGCAGCAACACAGCTaGAGCATCCAGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVMQQHS*SIQLHC
Trigger: ACAGTGGAGCTGGATGCTGCAGCTGTGTTGCTGCAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCAAGTGTGCTTCAATaGAGCAACACAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSVLQ*SNTAAA
Trigger: TGCTGCAGCTGTGTTGCTGCATTGAAGCACACTTGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCTCCTGCTCACCCTaGTCCAGGCTTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSCSP*SRLCSN
Trigger: GTTACTACAAAGCCTGGAGCAGGGTGAGCAGGAGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTGTTGAATACTGGCTaGTGTGCCTCGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVLNTG*CASAWA
Trigger: GGCCCAGGCCGAGGCACAGCAGCCAGTATTCAACAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCATAGTCCTTGATTaGATTGATGTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLIVLD*IDVLLS
Trigger: GCTAAGCAGTACATCAATGCAATCAAGGACTATGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTCATAGTCCTTGATTaGATTGATGTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLIVLD*IDVLLS
Trigger: GCTAAGCAGTACATCAATGCAATCAAGGACTATGAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTCGCTGTAGCGCGTaGGCAGATCCACGTACTCCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIARCSA*ADPRTP
Trigger: AGGAGTACGTGGATCTGCGCACGCGCTACAGCGAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGTGCCTCAGCTAGCTaGCGCTGCTTCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICASAS*RCFSSA
Trigger: TGCGCTGGAGAAGCAGCGGCAGCTAGCTGAGGCACA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCAGCCGCAGCCGCAGTaGTTCATTGGCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIQPQPQ*FIGLQL
Trigger: CAGCTGAAGGCCAATGAAGCACTGCGGCTGCGGCTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCAGCAGCTGCCGCTaGTGCTCACCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSSCR*CSPCSV
Trigger: GACAGAGCAAGGTGAGCAGCAGCGGCAGCTGCTGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCGGCATCCTCCTCTaGCAACTGCCTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGGILL*QLPLPL
Trigger: AAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCCTTCTCTTTGAGTaGAATCTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLLLFE*NLCLRL
Trigger: AAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISMSAL*SAACSS
Trigger: GGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISTKPF*RSSSLS
Trigger: AGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTGTGTCCTCCGCGTTaGTGCGAATGCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILCPPR*CECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVPPAP*CALCPP
Trigger: CGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCATCTCCGCGTCGGCTaGCTGCTTCTGTTTCAGCGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIHLRVG*LLLFQR
Trigger: GCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCTGCAAACTTTTTATaGTTCTCCATCTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSANFL*FSISAS
Trigger: CGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTGCAAACTTTTTATaGTTCTCCATCTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSANFL*FSISAS
Trigger: CGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTGCAAACTTTTTATaGTTCTCCATCTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSANFL*FSISAS
Trigger: CGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCGGAGTGTCTGCTCTaGAAACTTTTTATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPECLL*KLFMLL
Trigger: GAGAAGCATAAAAAGTTTGCAGAGCAGACACTCCGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCGGAGTGTCTGCTCTaGAAACTTTTTATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPECLL*KLFMLL
Trigger: GAGAAGCATAAAAAGTTTGCAGAGCAGACACTCCGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTCTGCCGGAGTGTCTaGTCTGCAAACTTTTTATGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSFCRSV*SANFLC
Trigger: GCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISLVAS*TACIFS
Trigger: GGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASSFC*CSSSAS
Trigger: CGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGGCAAGCTCCTTCTaGTGCTGCAGCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWASSF*CCSSSA
Trigger: GGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGAGAGGAAGCTCTTCTaGAGGGCCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIERKLF*RAWVSC
Trigger: GCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISLAFS*SMKRSR
Trigger: GCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTGTTCCATCTGCTaGTGCTGCCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISCSIC*CCRCCS
Trigger: GGAGCAGCAGCGGCAGCAGCAGCAGATGGAACAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTGGCCATCAGCTCCTaGTTTTCCTGTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLAISS*FSCSIC
Trigger: GCAGATGGAACAGGAAAAGCAGGAGCTGATGGCCAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTGGCCTCCTCCATaGTGGCCATCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISWPPP*WPSAPA
Trigger: AGCAGGAGCTGATGGCCAGCATGGAGGAGGCCAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCAGTTCCTCTTGCTTaGGCCTCACGCCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAVPLA*ASRPPQ
Trigger: CTGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCTGCTGCCGCTGCTaGTCCAGATGCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICCCRC*SRCCSS
Trigger: GGAACTGCAGCATCTGGAGCAGCAGCGGCAGCAGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCCTGTGCCAAACGCTaGAGTTCCTCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPCAKR*SSSWLR
Trigger: CCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTGGGTCAGACAAGATaGGGTTCATCTCTTCATCGA +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLGQTR*GSSLHR
Trigger: TCGATGAAGAGATGAACCGCATCTTGTCTGACCCAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTGGGTCAGACAAGATaGGGTTCATCTCTTCATCGA +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLGQTR*GSSLHR
Trigger: TCGATGAAGAGATGAACCGCATCTTGTCTGACCCAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTGGGTCAGACAAGATaGGGTTCATCTCTTCATCGA +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLGQTR*GSSLHR
Trigger: TCGATGAAGAGATGAACCGCATCTTGTCTGACCCAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVELAKR*RHGGLF
Trigger: GAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCAGGGCCTCATAGATaGTCAGCTTCTGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSGPHR*SASALL
Trigger: AAGCAGGGCAGAAGCTGAGCATCTATGAGGCCCTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIKDSLS*RRVSTS
Trigger: GGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCGGAAGGTCAGCTTaGGGGCATCAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRGRSA*GHQRAA
Trigger: TGCTGCTCTCTGATGCCCGCAAGCTGACCTTCCGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPSRNF*RFLVTS
Trigger: GGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGACATAGCCGGTGGCTaGCTGTGCTTCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIDIAGG*LCFQEL
Trigger: GAGCTCCTGGAAGCACAGGCAGCCACCGGCTATGTC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACACAGACATCTCCTTaGCCGTCTCTGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTQTSP*PSLGPQ
Trigger: TTGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACATCTTGGTCTTGGTaGGTGGGTCCTCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTSWSW*VGPQTH
Trigger: GTGGGTTTGAGGACCCACGCACCAAGACCAAGATGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCACCGGTCAGGTACTaGACCTCCAGGAAACGCTGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPPVRY*TSRKRW
Trigger: CCAGCGTTTCCTGGAGGTGCAGTACCTGACCGGTGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCTGTAGTAGCCCTTaGTGGACTGTGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGCSSP*WTVPQP
Trigger: AGGCTGCGGCACAGTCCAGCAAGGGCTACTACAGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCCGAGGGTCAGCTTaGGGTTGCCGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGRGSA*GCRQQC
Trigger: ACATTGCTGACGGCAACCCCAAGCTGACCCTCGGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATGGGCTTGTGCCGGTaGATGATAGCATTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRMGLCR*MIALKR
Trigger: TCTCTTCAATGCTATCATCCACCGGCACAAGCCCAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTAGGTTCTCCAGGTTaGTCTGTCGATACACTTTAT +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALGSPG*SVDTLY
Trigger: ATAAAGTGTATCGACAGACCAACCTGGAGAACCTAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTTTGTCTGCCTCCTTaGCAGGAAGTTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRFCLPP*QEVLSP
Trigger: AGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGTAGGGCGTCCGCCTaGTTCAGCTGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISRASA*FSCSSH
Trigger: GTGTGAGGAGCAGCTGAACCAGGCGGACGCCCTACT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAGSAV*SPLALG
Trigger: GCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITGGGP*RSSAAL
Trigger: CAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGTAACTTTCTTTCTTaGCTGCCATGTTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSNFLS*LPCWYC
Trigger: GCAATACCAACATGGCAGCCAAGAAAGAAAGTTACT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGTTCCTTCTCATCCTaGGCATCCTGCAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCSFSS*ASCSRS
Trigger: GGATCTGCTGCAGGATGCCCAGGATGAGAAGGAACA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCAGGACCCACCAGCTaGCATTGGTCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAGPTS*HWSPLC
Trigger: GCACAAGGGTGACCAATGCCAGCTGGTGGGTCCTGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTTTCTCCAGGTAGATaGCAGACAGGCTTCGGACCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVSPGR*QTGFGP
Trigger: AGGTCCGAAGCCTGTCTGCCATCTACCTGGAGAAAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTCAGCTGCTCCTCATaGGTTTTAAGCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRFSCSS*VLSTSS
Trigger: TGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCAAGCTCTTGGAGAGTaGCAGGCACAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIQALGE*QAQPGP
Trigger: AGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCTGTGCCTCGGCCTaGGCCCGCAGCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICCASA*ARSFFS
Trigger: ACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATGAACTTGATATACTaGCTCGTGAGCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRMNLIY*LVSVVS
Trigger: GCTGACCACGCTCACGAGCCAGTATATCAAGTTCAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCGCAGTGCTTCATTaGCCTTCAGCTGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAAVLH*PSAASA
Trigger: AGCGCTGGCAGCTGAAGGCCAATGAAGCACTGCGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRRSAS*SLCCRW
Trigger: CCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWKRPG*WRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCTGCAGTTCCTCCTaGCTCAGGATGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRCSSS*LRMPAS
Trigger: GGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSVSHW*ASVTVL
Trigger: CAGGACTGTTACTGAAGCCCACCAATGAGAAACTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSVSHW*ASVTVL
Trigger: CAGGACTGTTACTGAAGCCCACCAATGAGAAACTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCACTCAGTTTCTCATTaGTGGGCTTCAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKHSVSH*WASVTV
Trigger: GACTGTTACTGAAGCCCACCAATGAGAAACTGAGTG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCACTCAGTTTCTCATTaGTGGGCTTCAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVHSVSH*WASVTV
Trigger: GACTGTTACTGAAGCCCACCAATGAGAAACTGAGTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCACTCAGTTTCTCATTaGTGGGCTTCAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSHSVSH*WASVTV
Trigger: GACTGTTACTGAAGCCCACCAATGAGAAACTGAGTG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCCTTATCTGTGAGTaGCAGGAGGCGCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISLICE*QEAQAG
Trigger: ACCGGCCTGCGCCTCCTGCCACTCACAGATAAGGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPSKQS*PFRSCS
Trigger: GGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGTCAAAGAAACCCTTaGTGTCATCTGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGQRNP*CHLRDQ
Trigger: CTGATCCCTCAGATGACACCAAGGGTTTCTTTGACC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSMSY*RPERRS
Trigger: CGACCGCCGCTCTGGTCGCCAGTATGACATCGACGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPQKAF*ARLIRS
Trigger: AGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTTGGTCTTGGTGCGTaGGTCCTCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLGLGA*VLKPTE
Trigger: TTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTCACCTGAATGTCTaGGATCTGGAAGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAHLNV*DLEVQD
Trigger: ATCCTGCACTTCCAGATCTCAGACATTCAGGTGAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGACTTTTCATCAGGCTaGGGGACGTCCACATCTTCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVDFSSG*GTSTSS
Trigger: AGAAGATGTGGACGTCCCTCAGCCTGATGAAAAGTC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCATCGTACAGGGATaGAACATAGGTGATGATGGA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSIVQG*NIGDDG
Trigger: TCCATCATCACCTATGTTTCATCCCTGTACGATGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGAAGTTCTGTCTCCTTaGACTTCAAAAACTGGCACC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGREVLSP*TSKTGT
Trigger: GGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGGTCTGCACATCATTaGACAACAGCCGGATCATAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGSAHH*TTAGSY
Trigger: GTATGATCCGGCTGTTGTTCAATGATGTGCAGACCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAATTCCTCTATAGACTaGTGCATGCCTCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVNSSID*CMPRWL
Trigger: CAGCCACCGAGGCATGCATCAGTCTATAGAGGAATT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCTTCACAGCCTCATTaGCTGTCAGCCGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPSQPH*LSAADS
Trigger: GGAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCACTACGCCCGCCTTaGCAGCCTCATGGACATACA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPLRPP*QPHGHT
Trigger: TGTATGTCCATGAGGCTGTCAAGGCGGGCGTAGTGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTGTGGCCTCGTCCATaGCTTGAGAGCGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILWPRP*LESVPA
Trigger: AGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITSGGQ*DPCGRP
Trigger: AGGCCTACCGCAAGGGTCTCATTGACCACCAGACGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTGAAAGTTTTCTTCTaGACACGGTCTCGTTCATCT +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVKVFF*TRSRSS
Trigger: AGATGAACGAGACCGTGTGCAGAAGAAAACTTTCAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCTCCCGGTACTCCTaGCAACGAAGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSRYS*QRSCSS
Trigger: TGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCTGGAGGGGAACTTaGGCTCCTCAAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISWRGT*APQKQR
Trigger: CCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTGGCCCGCTTGTACTaGCCCCTCCAAAGACTGGTA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILARLY*PLQRLV
Trigger: TACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCAGGATGGCCACATaGAGCTTGCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISRMAT*SLPHSF
Trigger: GAAGGAGTGGGGCAAGCTGCATGTGGCCATCCTGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCATCTTTAAGGGTCTaGACATCATTGAACAACAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPSLRV*TSLNNS
Trigger: GCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCATCTTTAAGGGTCTaGACATCATTGAACAACAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPSLRV*TSLNNS
Trigger: GCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCATCCTGGGCATCCTaGAGCAGATCCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSWAS*SRSSSL
Trigger: CAGGCTCGAGGATCTGCTGCAGGATGCCCAGGATGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCACAGGCCTCCAGCTaGAGCCGGATATCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISQASS*SRISLS
Trigger: GCTCAAGGATATCCGGCTGCAGCTGGAGGCCTGTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCACCAACCTCCTGTaGCCCCCGCAACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILTNLL*PPQLIS
Trigger: AGAGATGAGTTGCGGGGGGCACAGGAGGTTGGTGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTCCTCTTGGATGCTaGGCTTCTGCTGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAPLGC*ASAAVR
Trigger: ACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGGCCACTGTTACATaGTCCTCCTGCAGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWATVT*SSCRVR
Trigger: GCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGTGCCAGGCTCTTCTaGTGTGCCACCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICARLF*CATSSA
Trigger: GGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTTGAGTGCAATCTCTaGCTCCGTCTTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVFECNL*LRLEPC
Trigger: ACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTCTGCCGGAGTGTCTaGTCTGCAAACTTTTTATGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRFCRSV*SANFLC
Trigger: GCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGTGTGGTCAGCTCCTaGTCTACCTGGGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISVVSS*STWAFC
Trigger: GCAGAAGGCCCAGGTAGAGCAGGAGCTGACCACACT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPSSSI*TRTEKS
Trigger: GCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATGAAGCGCTCGCGCTaGAGCAGGCTGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIMKRSR*SRLSFS
Trigger: TGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPPGSG*LLPVAA
Trigger: AGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTACACATCTTCCCGCTaGGTGAGCTCAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIYTSSR*VSSATV
Trigger: CACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTGGGTCAGACAAGATaGGGTTCATCTCTTCATCGA +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLGQTR*GSSLHR
Trigger: TCGATGAAGAGATGAACCGCATCTTGTCTGACCCAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTGCCCTGGAACTTaGCAAACGGTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISCPGT*QTVQTR
Trigger: CCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCCGCAGCAACTCCTaGCGCTGCTCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICRSNS*RCSSVK
Trigger: CTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGGATCATGTTTGACTaGATCACCTCCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGIMFD*ITSHRD
Trigger: GTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCGGGCATCCACAGTaGCACGTTGCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICGHPQ*HVAELR
Trigger: ACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACATTCTGCAGCTTGTaGAAGCGCATCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTFCSL*KRILPF
Trigger: GAAAGGGAGGATGCGCTTCCACAAGCTGCAGAATGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTAGGTTCTCCAGGTTaGTCTGTCGATACACTTTAT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLGSPG*SVDTLY
Trigger: ATAAAGTGTATCGACAGACCAACCTGGAGAACCTAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTAGGTTCTCCAGGTTaGTCTGTCGATACACTTTAT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLGSPG*SVDTLY
Trigger: ATAAAGTGTATCGACAGACCAACCTGGAGAACCTAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCAATCTCTTCAAAGCTaGAGGGGAACTTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVQSLQS*RGTCAP
Trigger: AGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTGAACTTCAAAAACTaGCACCATAGGATCTCAATC +
Preference number: 4 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLNFKN*HHRISI
Trigger: GATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTGAACTTCAAAAACTaGCACCATAGGATCTCAATC +
Preference number: 4 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLNFKN*HHRISI
Trigger: GATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCTGTCCCCTGTGTTCTaGATCTCCTTGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLSPVF*ISLIFF
Trigger: AAAGAAAATCAAGGAGATCCAGAACACAGGGGACAG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTGTCCCCTGTGTTCTaGATCTCCTTGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLSPVF*ISLIFF
Trigger: AAAGAAAATCAAGGAGATCCAGAACACAGGGGACAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCCACCAGCTGGCATTaGTCACCCTTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPTSWH*SPLCTV
Trigger: GACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCTGCAGCTCCTCTTaGATGCTGCGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICCSSS*MLRFCC
Trigger: GCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCTTCTGCAGGGCCTaGGTCTCCTGCAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILFCRA*VSCSIC
Trigger: GCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTCACGGTCCTGCCCTaGAACTTGCCAAACGGTGCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVTVLP*NLPNGA
Trigger: TGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTTGGTGTCATCACTTaGATCTGCCAGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLGVIT*ICQHTV
Trigger: AACCGTGTGCTGGCAGATCCAAGTGATGACACCAAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCAGACGGATGCCATaGTCCTTCAGGATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISRRMP*SFRIRP
Trigger: GGGCCTGATCCTGAAGGACCATGGCATCCGTCTGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGGCAGCTGACATCTTaGTCTTGGTGCGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGQLTS*SWCVGP
Trigger: AGGACCCACGCACCAAGACCAAGATGTCAGCTGCCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACATCACGCAGCTTCTaGGCTGTGCGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITSRSF*AVRAST
Trigger: TGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGTAGTAGCCCTTGCTaGACTGTGCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICSSPC*TVPQPP
Trigger: TGGAGGCTGCGGCACAGTCCAGCAAGGGCTACTACA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGAAGCCAGAGCCAGTaGCATCAAAGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRSQSQ*HQSCHA
Trigger: GGCGTGGCAGCTTTGATGCCACTGGCTCTGGCTTCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCACTGATGTGCCTCTaGGCCTTGATAAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSLMCL*ALIRCL
Trigger: CAAACACCTTATCAAGGCTCAGAGGCACATCAGTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000023226.13
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILYHTL*PQQQLL
Trigger: GAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCTCCGATCCAGACTaGACCTTGGGCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILSDPD*TLGFLA
Trigger: TGCCAAGAAGCCCAAGGTTCAGTCTGGATCGGAGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCATCTCCTCCGACTTaGGCTGCAGTAACTTCGCCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASPPT*AAVTSP
Trigger: AGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCCGGGATCATGTTTaGCTGCATCACCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILRDHV*LHHLPQ
Trigger: CTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTTGACGACGCCATCTaGGGAGGAGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILDDAI*GGDGDL
Trigger: GAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGTCTTGGGGCACGTaGGGTACTTGGAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWSWGT*GTWSKH
Trigger: GTGCTTACTCCAAGTACCTCACGTGCCCCAAGACCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTTCGTACAGGTCACTaGTGTGCCTCTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILRTGH*CASEPL
Trigger: CAGAGGCTCAGAGGCACATCAGTGACCTGTACGAAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGTGCCGGATCCATTaGAGCAGCAGCAACACAAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWCRIH*SSSNTS
Trigger: GCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGCCACATGCAGCTTaGCCCACTCCTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWPHAA*PTPSPH
Trigger: ATGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAACTCGCTTCGCAGTTaGTTCTCCCGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDINSLRS*FSRSRM
Trigger: CATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCATCTTTAAGGGTCTaGACATCATTGAACAACAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPSLRV*TSLNNS
Trigger: GCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCAAGTGTGCTTCAATaGAGCAACACAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSVLQ*SNTAAA
Trigger: TGCTGCAGCTGTGTTGCTGCATTGAAGCACACTTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCAGGCCTGAGAGGTaGCCCTTGTACTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIARPER*PLYSFS
Trigger: ACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCATTGGTCACCCTTGTaGACAGTCACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIHWSPL*TVTSTC
Trigger: GCAGGTGGAGGTGACTGTGCACAAGGGTGACCAATG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGACCTGTTCCAGCTTaGCCAGGGTCAGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGPVPA*PGSVPT
Trigger: AGTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCTCATAGTCCTTGATTaGATTGATGTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLIVLD*IDVLLS
Trigger: GCTAAGCAGTACATCAATGCAATCAAGGACTATGAG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCATAGTCCTTGATTaGATTGATGTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLIVLD*IDVLLS
Trigger: GCTAAGCAGTACATCAATGCAATCAAGGACTATGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCTCATCCTGCACCTaGCTTCGCAAGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILSSCT*LRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCCTTCTCTTTGAGTaGAATCTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLLLFE*NLCLRL
Trigger: AAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCAGTCTCCTCTAGCTaGAGCCTCAGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISVSSS*SLSVVS
Trigger: GCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTTCCTGCACCGCCTaGATCTTCTCCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASCTA*IFSFSI
Trigger: GATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCACGCAGCTGCTTTaGTTTAGCCACCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILTQLL*FSHLVL
Trigger: CAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCTCCTCACGCAGCTaGTTTGCTTTAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICSSRS*FALATS
Trigger: CGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTTTCCTGTTCCATCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIFSCSI*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGATGGAACAGGAAAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGCTGCTGCTCCAGATaGTGCAGTTCCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRCCSR*CSSSCL
Trigger: CAAGCAAGAGGAACTGCAGCATCTGGAGCAGCAGCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTAACAGTCCTGCAATaGTGCTGCGGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVTVLQ*CCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGATGGTCACGGTCCTaGCCTGGAACTTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRWSRS*PGTCQT
Trigger: CGTTTGGCAAGTTCCAGGGCAGGACCGTGACCATCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCAACTCCTGCCGCTaGTCCTCAGTAAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSNSCR*SSVKYS
Trigger: TGAATACTTTACTGAGGAGCAGCGGCAGGAGTTGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCACAGTGCCACGTTaGAGAGCTTCGTCGAGAGAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISTVPR*RASSRD
Trigger: GTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTAGGTTCTCCAGGTTaGTCTGTCGATACACTTTAT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLGSPG*SVDTLY
Trigger: ATAAAGTGTATCGACAGACCAACCTGGAGAACCTAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCACCGAGAATGCCTaGTCTAGGTTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIATENA*SRFSRL
Trigger: CAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTGAACTTCAAAAACTaGCACCATAGGATCTCAATC +
Preference number: 4 (lower is better)
Translates to: QHPERGSTGLKSPWASGALNFKN*HHRISI
Trigger: GATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTTTGTCTGCCTCCTTaGCAGGAAGTTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVFCLPP*QEVLSP
Trigger: AGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICTQCG*LPGAHA
Trigger: TGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGTAACTTTCTTTCTTaGCTGCCATGTTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSNFLS*LPCWYC
Trigger: GCAATACCAACATGGCAGCCAAGAAAGAAAGTTACT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGTAACTTTCTTTCTTaGCTGCCATGTTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSNFLS*LPCWYC
Trigger: GCAATACCAACATGGCAGCCAAGAAAGAAAGTTACT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTGTCCCCTGTGTTCTaGATCTCCTTGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLSPVF*ISLIFF
Trigger: AAAGAAAATCAAGGAGATCCAGAACACAGGGGACAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATCCAGACTGAACCTTaGGCTTCTTGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIIQTEP*ASWQGR
Trigger: CCTCCCCTGCCAAGAAGCCCAAGGTTCAGTCTGGAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTAGCCACCTCGTCCTaGAAGAGCTGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILATSS*KSCSSL
Trigger: CAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCACAGGCACACGGTaGCTGTGCACAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISTGTR*LCTGSM
Trigger: CATTGATCCTGTGCACAGCCACCGTGTGCCTGTGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACGGTGCAGACACGGTaGCCTTTTCGAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITVQTR*PFRRRH
Trigger: GTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCCACAGCCACCTCTaGCTGCAGCAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGHSHL*LQQVFL
Trigger: AAGAAAGACTTGCTGCAGCCAGAGGTGGCTGTGGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGACATACAGACGTTaGTTCCGCACAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWTYRR*FRTGST
Trigger: GGTGGACCCTGTGCGGAACCAACGTCTGTATGTCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCAGGCCCTTTTTCATaGCCTGGAACAGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPGPFS*PGTARW
Trigger: CCATCTCGCTGTTCCAGGCCATGAAAAAGGGCCTGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCAGGTACGTCTGGTaGTCAATGAGACCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISRYVW*SMRPLR
Trigger: CCGCAAGGGTCTCATTGACCACCAGACGTACCTGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGACTGTCCGCTCACCTaGATGTCTGAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIDCPLT*MSEIWK
Trigger: CTTCCAGATCTCAGACATTCAGGTGAGCGGACAGTC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGCATCGTACAGGGATaGAACATAGGTGATGATGGA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSIVQG*NIGDDG
Trigger: TCCATCATCACCTATGTTTCATCCCTGTACGATGCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGAAGTTCTGTCTCCTTaGACTTCAAAAACTGGCACC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVEVLSP*TSKTGT
Trigger: GGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCAACCTTCTCACCATaGCGCTCAATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISTFSP*RSISSS
Trigger: GCTGGAGGAGATTGAGCGTCATGGTGAGAAGGTTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTGAGCCTTGTACGTaGTCAGCTGGAGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAEPCT*SAGAHS
Trigger: ACTATGAGCTCCAGCTGATCACGTACAAGGCTCAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVLVQC*AVNEVL
Trigger: AAGAACCTCATTGACCGCTCAGCACTGGACCAGTAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACTTGGAGTAAGCACTaGCATCACGCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITWSKH*HHAASG
Trigger: CCCAGAAGCTGCGTGATGTCAGTGCTTACTCCAAGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTGAGATCTGGAAGTaGAGGATGATTGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSEIWK*RMIVQM
Trigger: CATCTGGACAATCATCCTGCACTTCCAGATCTCAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGACCGGTTTTTGTCTaGCTCCTTGGCAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGPVFV*LLGRKF
Trigger: GAACTTCCTGCCAAGGAGGCAGACAAAAACCGGTCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICSPCG*RPSLRV
Trigger: GACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATGCAGCAACACAGCTaGAGCATCCAGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIMQQHS*SIQLHC
Trigger: ACAGTGGAGCTGGATGCTGCAGCTGTGTTGCTGCAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTCCTGCTCACCCTaGTCCAGGCTTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSCSP*SRLCSN
Trigger: GTTACTACAAAGCCTGGAGCAGGGTGAGCAGGAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACTCATAGTCCTTGATTaGATTGATGTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLIVLD*IDVLLS
Trigger: GCTAAGCAGTACATCAATGCAATCAAGGACTATGAG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTGCAAACTTTTTATaGTTCTCCATCTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSANFL*FSISAS
Trigger: CGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCGGAGTGTCTGCTCTaGAAACTTTTTATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPECLL*KLFMLL
Trigger: GAGAAGCATAAAAAGTTTGCAGAGCAGACACTCCGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTCTGCCGGAGTGTCTaGTCTGCAAACTTTTTATGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVFCRSV*SANFLC
Trigger: GCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISICSC*TVCISS
Trigger: GGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICSICS*CTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTGGCCATCAGCTCCTaGTTTTCCTGTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILAISS*FSCSIC
Trigger: GCAGATGGAACAGGAAAAGCAGGAGCTGATGGCCAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTGGGTCAGACAAGATaGGGTTCATCTCTTCATCGA +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLGQTR*GSSLHR
Trigger: TCGATGAAGAGATGAACCGCATCTTGTCTGACCCAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPSRNF*RFLVTS
Trigger: GGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACACAGACATCTCCTTaGCCGTCTCTGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITQTSP*PSLGPQ
Trigger: TTGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACATCTTGGTCTTGGTaGGTGGGTCCTCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITSWSW*VGPQTH
Trigger: GTGGGTTTGAGGACCCACGCACCAAGACCAAGATGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGGTCTCGTTCATCTTaGTCATCCTTTGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRSRSS*SSFACR
Trigger: TCGGCAGGCAAAGGATGAGCAAGATGAACGAGACCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000054449.14
ENSMUST00000169714.8
CDS-3UTR CCA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTGAACTTCAAAAACTaGCACCATAGGATCTCAATC +
Preference number: 4 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLNFKN*HHRISI
Trigger: GATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTGAACTTCAAAAACTaGCACCATAGGATCTCAATC +
Preference number: 4 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLNFKN*HHRISI
Trigger: GATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGTAACTTTCTTTCTTaGCTGCCATGTTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSNFLS*LPCWYC
Trigger: GCAATACCAACATGGCAGCCAAGAAAGAAAGTTACT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGTTCCTTCTCATCCTaGGCATCCTGCAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICSFSS*ASCSRS
Trigger: GGATCTGCTGCAGGATGCCCAGGATGAGAAGGAACA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSVSHW*ASVTVL
Trigger: CAGGACTGTTACTGAAGCCCACCAATGAGAAACTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCACTCAGTTTCTCATTaGTGGGCTTCAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVHSVSH*WASVTV
Trigger: GACTGTTACTGAAGCCCACCAATGAGAAACTGAGTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGAGCCGTTCCTTGGTaGCATCAACAAAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRAVPW*HQQRLR
Trigger: CCGGAGTCTTTGTTGATGCCACCAAGGAACGGCTCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCGAGAGCCGTTCCTTaGTGGCATCAACAAAGACTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPRAVP*WHQQRL
Trigger: GAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPQKAF*ARLIRS
Trigger: AGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGACTTTTCATCAGGCTaGGGGACGTCCACATCTTCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIDFSSG*GTSTSS
Trigger: AGAAGATGTGGACGTCCCTCAGCCTGATGAAAAGTC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAATTCCTCTATAGACTaGTGCATGCCTCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDINSSID*CMPRWL
Trigger: CAGCCACCGAGGCATGCATCAGTCTATAGAGGAATT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGACAGCTCTTTGACTaGTGTCTTGCCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGQLFD*CLAILE
Trigger: CTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTTGAGTGCAATCTCTaGCTCCGTCTTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIFECNL*LRLEPC
Trigger: ACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGGATCATGTTTGACTaGATCACCTCCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGIMFD*ITSHRD
Trigger: GTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTAGGTTCTCCAGGTTaGTCTGTCGATACACTTTAT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLGSPG*SVDTLY
Trigger: ATAAAGTGTATCGACAGACCAACCTGGAGAACCTAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCAATCTCTTCAAAGCTaGAGGGGAACTTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIQSLQS*RGTCAP
Trigger: AGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTGTCCCCTGTGTTCTaGATCTCCTTGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLSPVF*ISLIFF
Trigger: AAAGAAAATCAAGGAGATCCAGAACACAGGGGACAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTTGGTGTCATCACTTaGATCTGCCAGCACACGGTT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILGVIT*ICQHTV
Trigger: AACCGTGTGCTGGCAGATCCAAGTGATGACACCAAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAACTCCAGGTACGTCTaGTGGTCAATGAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDINSRYV*WSMRPL
Trigger: CAAGGGTCTCATTGACCACCAGACGTACCTGGAGTT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCAAGTGTGCTTCAATaGAGCAACACAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSVLQ*SNTAAA
Trigger: TGCTGCAGCTGTGTTGCTGCATTGAAGCACACTTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCTCATAGTCCTTGATTaGATTGATGTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LEVWGPFPDRILPGETGVLIVLD*IDVLLS
Trigger: GCTAAGCAGTACATCAATGCAATCAAGGACTATGAG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCCTTCTCTTTGAGTaGAATCTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILLLFE*NLCLRL
Trigger: AAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCAACTCCTGCCGCTaGTCCTCAGTAAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISNSCR*SSVKYS
Trigger: TGAATACTTTACTGAGGAGCAGCGGCAGGAGTTGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATGGGCTTGTGCCGGTaGATGATAGCATTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIMGLCR*MIALKR
Trigger: TCTCTTCAATGCTATCATCCACCGGCACAAGCCCAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTTTGTCTGCCTCCTTaGCAGGAAGTTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIFCLPP*QEVLSP
Trigger: AGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR TCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGCATCGTACAGGGATaGAACATAGGTGATGATGGA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISIVQG*NIGDDG
Trigger: TCCATCATCACCTATGTTTCATCCCTGTACGATGCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCTGAGATCTGGAAGTaGAGGATGATTGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISEIWK*RMIVQM
Trigger: CATCTGGACAATCATCCTGCACTTCCAGATCTCAGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCGGAGTGTCTGCTCTaGAAACTTTTTATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPECLL*KLFMLL
Trigger: GAGAAGCATAAAAAGTTTGCAGAGCAGACACTCCGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTCTGCCGGAGTGTCTaGTCTGCAAACTTTTTATGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIFCRSV*SANFLC
Trigger: GCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTGGGTCAGACAAGATaGGGTTCATCTCTTCATCGA +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILGQTR*GSSLHR
Trigger: TCGATGAAGAGATGAACCGCATCTTGTCTGACCCAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISVSHW*ASVTVL
Trigger: CAGGACTGTTACTGAAGCCCACCAATGAGAAACTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCATCTTTAAGGGTCTaGACATCATTGAACAACAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPSLRV*TSLNNS
Trigger: GCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTAGGTTCTCCAGGTTaGTCTGTCGATACACTTTAT +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILGSPG*SVDTLY
Trigger: ATAAAGTGTATCGACAGACCAACCTGGAGAACCTAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR GCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCATAGTCCTTGATTaGATTGATGTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILIVLD*IDVLLS
Trigger: GCTAAGCAGTACATCAATGCAATCAAGGACTATGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGTAACTTTCTTTCTTaGCTGCCATGTTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISNFLS*LPCWYC
Trigger: GCAATACCAACATGGCAGCCAAGAAAGAAAGTTACT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CCA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTGAACTTCAAAAACTaGCACCATAGGATCTCAATC +
Preference number: 4 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILNFKN*HHRISI
Trigger: GATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CCTGCTCTGCCTGGGCCCGACGCGCCGCCTCCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCGCCTGCGCCTGAGCCTGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: PALPGPDAPPPAPLP*AASLRPPAPEPGPE
Trigger: CTCAGGCCCAGGCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCGGGCCCAGGCAGAGCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp CCTCCGCGCGGGCCTGAGCCCGGCTCATCTCAGCCATGCGCAGCTTaGGGCGCTCGGCCTCCGCGCTCATCTCCAGCTGCCGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: PPRGPEPGSSQPCAA*GARPPRSSPAAAAA
Trigger: AGCGGCAGCGGCAGCTGGAGATGAGCGCGGAGGCCGAGCGCCTCAAGCTGCGCATGGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TTCCGCACTGCGCTGTGCCGTCTCCAGGGCCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTGGCGCAGCCGCCGCTCGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: FRTALCRLQGHLHLA*PLCLGLAQPPLGLL
Trigger: GAGGAGGCCGAGCGGCGGCTGCGCCAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CGCTCTGCCTCGGCCCGCTGGCGGGCGGCATCCTCCTCTGCCAACTaGCTCTGCCTCTTGGCCTCCTCCGCCAGAGCACGCAGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: RSASARWRAASSSAN*LCLLASSARARSRA
Trigger: TGCCCGGCTGCGTGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCCCGCCAGCGGGCCGAGGCAGAGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp TCCACTTCCGCACTGCGCTGTGCCGTCTCCAGGGCCACCTGCACTTaGCGTGCCCGCTCTGCCTCGGCTTGGCGCAGCCGCCGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: STSALRCAVSRATCT*RARSASAWRSRRSA
Trigger: GGCCGAGCGGCGGCTGCGCCAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp TCAGCCTGCTTCCGGAAGCGCTGGGCGTCCTCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCCATGCGCAGCTTGAGGCGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SACFRKRWASSSARA*ARLISAMRSLRRSA
Trigger: GGCCGAGCGCCTCAAGCTGCGCATGGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAAGCAGGCTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGCAGCTCCACTTCCGCACTGCGCTGTGCCGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCTGCCTCGGCTTGGCGCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: CSSTSALRCAVSRAT*TWRARSASAWRSRR
Trigger: GCGGCGGCTGCGCCAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TTCTCTGCCAGGGCCCGCTGCTGCGCCAGGTCCTCCTCCGCTAGCTaGCTCAGCCGTGCTGCCTCCTGGGCGGCCACGCTCAACCGTGCC +
Preference number: 5 (lower is better)
Translates to: FSARARCCARSSSAS*LSRAASWAATLNRA
Trigger: GGCACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCTGAGGCAGCTAGCGGAGGAGGACCTGGCGCAGCAGCGGGCCCTGGCAGAGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCCCCGGTGCAGGCTaGGGCCTCCAGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAPGAG*GLQQPL
Trigger: CAGCGGCTGCTGGAGGCCCAAGCCTGCACCGGGGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCCCCGGTGCAGGCTaGGGCCTCCAGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAPGAG*GLQQPL
Trigger: CAGCGGCTGCTGGAGGCCCAAGCCTGCACCGGGGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGCCGCTTCTGCGCTTCTGCCTCCTCAGCCCGAGCGCGCAGAGCCTaGAGCTCGCCCTCCGCCCCTCCACGCTGCCGCTCAGTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: CRFCASASSARARRA*SSPSAPPRCRSVVS
Trigger: GGAGACAACTGAGCGGCAGCGTGGAGGGGCGGAGGGCGAGCTGCAGGCTCTGCGCGCTCGGGCTGAGGAGGCAGAAGCGCAGAAGCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp AGCCAGAGCCAGTGGCATCAAAGCTGCCACGCCGGGAGCCGGCCCTaGAGCCGGTGCGTGAACCAGTGCGTGAGCCGGCGGTCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SQSQWHQSCHAGSRP*SRCVNQCVSRRSSQ
Trigger: CTGGCTCGACCGCCGGCTCACGCACTGGTTCACGCACCGGCTCCAGGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTGGCTCTGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp GGCACGTGGCCCCGCACCGGGTGGGCAGGGTTGCGTGGCTTCAACTaGACAATAGCCTTGGCCCGCTTGGCCAGGCCTGAGAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: GTWPRTGWAGLRGFN*TIALARLARPERCP
Trigger: GGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGGTGCGGGGCCACGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp TCTGCCTGGGCCTTAGCCTGGGCGTGTGCCTCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCCACCTCGGCCAGTCGCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SAWALAWACASASCR*FSSAASTSASRSRS
Trigger: GGAGCGGGAGCGACTGGCCGAGGTGGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGAGGCACACGCCCAGGCTAAGGCCCAGGCAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCCGCCTTGCCCCGCCGCCGCGCTTCCCGCTCGGCCTCTTCCTTCTaGTTCTCGGCATCGGCCTGTGCCAGGCTCTTCTGCTGTGCCACC +
Preference number: 5 (lower is better)
Translates to: SALPRRRASRSASSF*FSASACARLFCCAT
Trigger: GGTGGCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAGAAGCAGAAGGAAGAGGCCGAGCGGGAAGCGCGGCGGCGGGGCAAGGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGCTGCTCACCTTGCTCTGTCTCGGCCCGCAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGCTGTGCGGTGCCCTCCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CCSPCSVSARRRISS*SAARRCCAVPSASC
Trigger: GCAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTGCGGGCCGAGACAGAGCAAGGTGAGCAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp GATGCCTTGCGCAGCTGGGCCAGGCGCTCCTCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCCAGACGCCGCCGCTGGAAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: DALRSWARRSSMSAL*SAACSSRRRRWKAS
Trigger: CGAGGCCTTCCAGCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CCGCCAACTGCCGCTGCCGGGCCGCCTCCAGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCGCGTTGCTGCGAATGCGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: PPTAAAGPPPVPPAP*CALCPPRCCECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGCGGCCCGGCAGCGGCAGTTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp GGCGGCCTCCTGGGCCAGCTGCAGCTGCCTGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCGTGCTTCTTCAACCTTGGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: GGLLGQLQLPGRLLL*PLSQAPCFFNLGLE
Trigger: CTCAAGGCCAAGGTTGAAGAAGCACGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCCAGGCAGCTGCAGCTGGCCCAGGAGGCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp TGCGCCAGGTCCTCCTCCGCTAGCTGCCTCAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGTGCCGCTTCCTCGGCCACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: CARSSSASCLSRAAS*AATLNRAASSATCF
Trigger: GAAACAGGTGGCCGAGGAAGCGGCACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCTGAGGCAGCTAGCGGAGGAGGACCTGGCGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp CGGGTTCAGCCTCCACGGACGGGCCATCGGGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAGCGGCCTGGGTGGTGGCGATCTCAG +
Preference number: 5 (lower is better)
Translates to: RVQPPRTGHRVHPGR*AVPSWKRPGWWRSQ
Trigger: CTGAGATCGCCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCCGGGATGCACCCGATGGCCCGTCCGTGGAGGCTGAACCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCCCCGGTGCAGGCTaGGGCCTCCAGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAPGAG*GLQQPL
Trigger: CAGCGGCTGCTGGAGGCCCAAGCCTGCACCGGGGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp ACTGCTGCCTCCTCGCGCCGCGCCACCTCCTCCTGCATGCGCCGCTaGAGTTCTTGTGCTTCCAGCTCTGCCTGGGCCTTAGCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: TAASSRRATSSCMRR*SSCASSSAWALAWA
Trigger: CGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAAGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCGGCGCGAGGAGGCAGCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGCTGTGCGTCCACTGCTGCCTCCTCGCGCCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCTTGTGCTTCCAGCTCTGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: CCASTAASSRRATSS*MRRCSSCASSSAWA
Trigger: GGCCCAGGCAGAGCTGGAAGCACAAGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CTGCAGCTCCTCTTGGATGCTGCGCTTCTGCTGCTGTGCGTCCACTaGTGCCTCCTCGCGCCGCGCCACCTCCTCCTGCATGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LQLLLDAALLLLCVH*CLLAPRHLLLHAPL
Trigger: CAGCGGCGCATGCAGGAGGAGGTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp AGCTGGGCCAGGCGCTCCTCGATGTCAGCCTTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGCTGGAAGGCCTCGTCTTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: SWARRSSMSALCSAA*SSRRRRWKASSSAR
Trigger: CCTGGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGAGCGCCTGGCCCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CTTGCGCAGCTGGGCCAGGCGCTCCTCGATGTCAGCCTTGTGCAGTaGCGCCTGCTCCTCCAGACGCCGCCGCTGGAAGGCCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LAQLGQALLDVSLVQ*RLLLQTPPLEGLVF
Trigger: GAAGACGAGGCCTTCCAGCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGAGCGCCTGGCCCAGCTGCGCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCCACCTGCCGCCGCTGTCGCAGGGTGTCCTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCTGATGCCTTGCGCAGCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: STCRRCRRVSSTKPF*RSSSLSDALRSWAR
Trigger: CCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGAGGACACCCTGCGACAGCGGCGGCAGGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CCAACTGCCGCTGCCGGGCCGCCTCCAGTTCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGTTGCTGCGAATGCGCCCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PTAAAGPPPVPPAPC*ALCPPRCCECAPAP
Trigger: TGGAGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGCGGCCCGGCAGCGGCAGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp ACCTTGGCCTTGAGTCGCTCGACCTCCTCCAGTGCCACCTTGCGCTaGCGAGCGGCTTCCTCCTCCGCTGCCAGGCTCCTCTGCACGCGC +
Preference number: 5 (lower is better)
Translates to: TLALSRSTSSSATLR*RAASSSAARLLCTR
Trigger: GCGCGTGCAGAGGAGCCTGGCAGCGGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAAGGT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCCTGCAGCCGCCGGGCCTGCTCCTGGGCAAGCTCCTTCTGCTGCTaGAGCAGCTCAGCCTCGGCCTTGAGCCTCGTGGCTTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: SCSRRACSWASSFCC*SSSASALSLVASCT
Trigger: GGTGCAGGAAGCCACGAGGCTCAAGGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCGGCTGCAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp AGCCTCCACGGACGGGCCATCGGGTGCATCCCGGCCGTTGGGCAGTaGCTTCGTGGAAGCGGCCTGGGTGGTGGCGATCTCAGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SLHGRAIGCIPAVGQ*LRGSGLGGGDLRVS
Trigger: GCTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCCGGGATGCACCCGATGGCCCGTCCGTGGAGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp AGCCTGCGCTGCCTGTTGCTCAGCGATGCGCTGGGCGCACTCCCGTaGGGGGTCCTTATCCAGTGGCAGCCGCAGACGGTGCACAGTCCG +
Preference number: 5 (lower is better)
Translates to: SLRCLLLSDALGALP*GVLIQWQPQTVHSP
Trigger: CGGACTGTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGGCAGCGCAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165210.8
CDS CCA 90 bp TGCACCACAAAGGCGTGTGCCTTCTCCTCCGCCTGCAGCCGTTTCTaGGCGGCCTCCTGGGCCAGCTGCAGCTGCCTGGCCGACTCCTGC +
Preference number: 5 (lower is better)
Translates to: CTTKACAFSSACSRF*AASWASCSCLADSC
Trigger: GCAGGAGTCGGCCAGGCAGCTGCAGCTGGCCCAGGAGGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGCACACGCCTTTGTGGTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp CGGACGGGCCATCGGGTGCATCCCGGCCGTTGGGCAGTGCCTTCGTaGAAGCGGCCTGGGTGGTGGCGATCTCAGAGTGAGCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: RTGHRVHPGRWAVPS*KRPGWWRSQSEPRQ
Trigger: CTGCCTTGGCTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCCGGGATGCACCCGATGGCCCGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCTCCTCTGCCCGCTGTaGCTCAGCCAGCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLLCPL*LSQPLL
Trigger: GAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGAG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCCTCTGCCCGCTGTaGCTCAGCCAGCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLLCPL*LSQPLL
Trigger: GAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGAG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCCCCGGTGCAGGCTaGGGCCTCCAGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAPGAG*GLQQPL
Trigger: CAGCGGCTGCTGGAGGCCCAAGCCTGCACCGGGGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCAGAGGCCCCCTCTTaGGTGGGCAGCCTAGGGGAC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAEAPS*VGSLGD
Trigger: GTCCCCTAGGCTGCCCACCAAAGAGGGGGCCTCTGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS TCA 90 bp GCTCTGCCCGCTCTCGCAGGCGCCGTGCTTCTTCAACCTTGGCCTTaGGTCGCTCGACCTCCTCCAGTGCCACCTTGCGCTGCCGAGCGG +
Preference number: 5 (lower is better)
Translates to: ALPALAGAVLLQPWP*VARPPPVPPCAAER
Trigger: CCGCTCGGCAGCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGAAGCACGGCGCCTGCGAGAGCGGGCAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp GCCCGAGCGCGCAGAGCCTGCAGCTCGCCCTCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGCTGCAGACGTACTACACGGATCTCT +
Preference number: 5 (lower is better)
Translates to: ARARRACSSPSAPPR*RSVVSSCRRTTRIS
Trigger: AGAGATCCGTGTAGTACGTCTGCAGCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGAGGGCGAGCTGCAGGCTCTGCGCGCTCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCTGCCCGGACCTTAGCCAGTTCAGCCTCCAGCTCCTGGCGCTTCTaGGTGGCTGCGGTGGCCTCGTGCTGTAGCCGGGCCAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SARTLASSASSSWRF*VAAVASCCSRASSS
Trigger: GGAAGAGCTGGCCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGAACTGGCTAAGGTCCGGGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TTCTCCATCTCCGCGTCGGCTGCCTGCTTCTGTTTCAGCGCTGCCTaGTCTGCCTGGGCCCGACGCGCCGCCTCCTGCTCCGCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: FSISASAACFCFSAA*SAWARRAASCSASL
Trigger: CAAGGAAGCGGAGCAGGAGGCGGCGCGTCGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATGGAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp ATGCTTCTCCATCTCCGCGTCGGCTGCCTGCTTCTGTTTCAGCGCTaGCTGCTCTGCCTGGGCCCGACGCGCCGCCTCCTGCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: MLLHLRVGCLLLFQR*LLCLGPTRRLLLRF
Trigger: GAAGCGGAGCAGGAGGCGGCGCGTCGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATGGAGAAGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp CTCAGCGATGCGCTGGGCGCACTCCCGTGCGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCACAGTCCGAGTCTCACAGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSDALGALPCGVLIQ*QPQTVHSPSLTGLQ
Trigger: CTGGAGGCCTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp ACCTCCATCTCTGCCCGGACCTTAGCCAGTTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCGGTGGCCTCGTGCTGTAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: TSISARTLASSASSS*RFCVAAVASCCSRA
Trigger: GGCCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGAACTGGCTAAGGTCCGGGCAGAGATGGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCTGGGCCTCCTGGTaGGGCGGCGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSWASW*GGGTRK
Trigger: CTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTGGGCCTCCTGGTaGGGCGGCGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSWASW*GGGTRK
Trigger: CTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCTCTTGCCGCCTCTaGGCATCCTGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCSCRL*ASCSQA
Trigger: CGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASACR*RWLSSC
Trigger: GCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDASACR*RWLSSC
Trigger: GCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCGCTCAGCCTCAGCTaGCTGCTGTGCCCGTCGCTC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSLSLS*LLCPSL
Trigger: GAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCTCCAGCTCTGCCTaGCCCGCGGCGGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSSSA*PAAAFS
Trigger: TGAGAAAGCCGCCGCGGGCAAGGCAGAGCTGGAGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTGCTCCGCTTCCTaGCGCAGCTTCTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSCSAS*RSFSAA
Trigger: GGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCTGCTCCGCTTCCTaGCGCAGCTTCTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSCSAS*RSFSAA
Trigger: GGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGASRP*GSAFVE
Trigger: TTCCACGAAGGCACTGCCCAACGGCCGGGATGCACC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCCCCGGTGCAGGCTaGGGCCTCCAGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAPGAG*GLQQPL
Trigger: CAGCGGCTGCTGGAGGCCCAAGCCTGCACCGGGGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCCCCGGTGCAGGCTaGGGCCTCCAGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAPGAG*GLQQPL
Trigger: CAGCGGCTGCTGGAGGCCCAAGCCTGCACCGGGGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCCCCGGTGCAGGCTaGGGCCTCCAGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAPGAG*GLQQPL
Trigger: CAGCGGCTGCTGGAGGCCCAAGCCTGCACCGGGGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp CGGTGCGTGAACCAGTGCGTGAGCCGGCGGTCGAGCCAGAGCCACTaGCGCTGTACGGGCTGTAGTAGCCCTTGCTGGACTGTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: RCVNQCVSRRSSQSH*RCTGCSSPCWTVPQ
Trigger: CTGCGGCACAGTCCAGCAAGGGCTACTACAGCCCGTACAGCGTCAGTGGCTCTGGCTCGACCGCCGGCTCACGCACTGGTTCACGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp GCGCACTCCCGTGCGGGGTCCTTATCCAGTGGCAGCCGCAGACGGTaGACAGTCCGAGTCTCACAGGCCTCCAGCTGCAGCCGGATATCC +
Preference number: 5 (lower is better)
Translates to: AHSRAGSLSSGSRRR*TVRVSQASSCSRIS
Trigger: GGATATCCGGCTGCAGCTGGAGGCCTGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCCGCACGGGAGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp AGCCTGCGCTTTCTGTTGCTCAGCGATGCGCTGGGCGCACTCCCGTaGGGGGTCCTTATCCAGTGGCAGCCGCAGACGGTGCACAGTCCG +
Preference number: 5 (lower is better)
Translates to: SLRFLLLSDALGALP*GVLIQWQPQTVHSP
Trigger: CGGACTGTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CCTCAGGTGCTGCAGCTCCTCTTGGATGCTGCGCTTCTGCTGCTGTaGGTCCACTGCTGCCTCCTCGCGCCGCGCCACCTCCTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: PQVLQLLLDAALLLL*VHCCLLAPRHLLLH
Trigger: ATGCAGGAGGAGGTGGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCACCTGAGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp AAAGGATGCCCGCTTGCTCTGCAGCTCCACTTCCGCACTGCGCTGTaGCGTCTCCAGGGCCACCTGCACTTGGCGTGCCCGCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: KGCPLALQLHFRTAL*RLQGHLHLACPLCL
Trigger: GAGGCAGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGCCGCCTGCTCCTCCAGACGCCGCCGCTGGAAGGCCTCGTCTTCTaGCAGGCGCCTCAGGCGCTCATTCTCGGCCTCCTTCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: CRLLLQTPPLEGLVF*QAPQALILGLLLFE
Trigger: CTCAAAGAGAAGGAGGCCGAGAATGAGCGCCTGAGGCGCCTGGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGAGGAGCAGGCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp CGCATCCGGCTGCGTTCTGCAGCCTCCACCTGCTGGGCCTTGGCCTaGATCTCTGCCTCCGAGCTCTGCCTCAGGTGCTGCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RIRLRSAASTCWALA*ISASELCLRCCSSS
Trigger: AGAGGAGCTGCAGCACCTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGAACGCAGCCGGATGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp AAGCCCTTCTGCCGCTCCAGCTCGCTCTCTGATGCCTTGCGCAGCTaGGCCAGGCGCTCCTCGATGTCAGCCTTGTGCAGTGCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: KPFCRSSSLSDALRS*ARRSSMSALCSAAC
Trigger: GCAGGCGGCACTGCACAAGGCTGACATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCAGAAGGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp GTGCATCCCGGCCGTTGGGCAGTGCCTTCGTGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAGCCAAGGCAGCGCGGTGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: VHPGRWAVPSWKRPG*WRSQSEPRQRGALP
Trigger: AGGAAGAGCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCCGGGATGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGGCCGAGGGTCAGCTaGGGGTTGCCGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRPRVS*GLPSAM
Trigger: CATTGCTGACGGCAACCCCAAGCTGACCCTCGGCCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGGCCGAGGGTCAGCTaGGGGTTGCCGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRPRVS*GLPSAM
Trigger: CATTGCTGACGGCAACCCCAAGCTGACCCTCGGCCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCAGGCCAGCAGGTCTaGCAGGTAGCGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPGQQV*QVAQCG
Trigger: TCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCAGGCCAGCAGGTCTaGCAGGTAGCGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPGQQV*QVAQCG
Trigger: TCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDQVAQS*SLLLGL
Trigger: AAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMQVAQS*SLLLGL
Trigger: AAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCTCCTCTGCCCGCTGTaGCTCAGCCAGCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLLCPL*LSQPLL
Trigger: GAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGAG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCTCCTCTGCCCGCTGTaGCTCAGCCAGCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLLCPL*LSQPLL
Trigger: GAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGAG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAGGCGGATCAGCTCTaGCTCCGCAGCCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQADQL*LRSQAL
Trigger: CAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCAGGCGGATCAGCTCTaGCTCCGCAGCCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQQADQL*LRSQAL
Trigger: CAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAACTGCCTCTGCCTCTaGGCCTCCTCCGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDNCLCL*ASSARA
Trigger: TGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAACTGCCTCTGCCTCTaGGCCTCCTCCGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMNCLCL*ASSARA
Trigger: TGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSLSDA*RSWARR
Trigger: GCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSLSDA*RSWARR
Trigger: GCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATTGTGTCCTCCGCGTaGCTGCGAATGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDIVSSA*LRMRPS
Trigger: GCTGGGGCGCATTCGCAGCAACGCGGAGGACACAAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAPCCA*CPPRCC
Trigger: GCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAPCCA*CPPRCC
Trigger: GCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGACCGGCACCGCTGTaGGAGCTGGCTGTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRPAPL*ELAVGD
Trigger: GTCACCTACAGCCAGCTCCAACAGCGGTGCCGGTCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTCTTCTCTGCCCCTTaGAGTGGCAGGAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVFSAP*SGRRRR
Trigger: CCTGCGCCTCCTGCCACTCAAAGGGGCAGAGAAGAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTTCTCTGCCCCTTaGAGTGGCAGGAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVFSAP*SGRRRR
Trigger: CCTGCGCCTCCTGCCACTCAAAGGGGCAGAGAAGAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMITTRR*RTEDLE
Trigger: CTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDITTRR*RTEDLE
Trigger: CTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp CAGGGTGTCCTCCACCAAGCCCTTCTGCCGCTCCAGCTCGCTCTCTaGTGCCTTGCGCAGCTGGGCCAGGCGCTCCTCGATGTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: QGVLHQALLPLQLAL*CLAQLGQALLDVSL
Trigger: AAGGCTGACATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGAGGACACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCTCTGCCTCCGAGCTCTGCCTCAGGTGCTGCAGCTCCTCTTGGATaGTGCGCTTCTGCTGCTGTGCGTCCACTGCTGCCTCCTCGCGCC +
Preference number: 5 (lower is better)
Translates to: SLPPSSASGAAAPLG*CASAAVRPLLPPRA
Trigger: GGCGCGAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCACCTGAGGCAGAGCTCGGAGGCAGAGA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCTCTGCAAAGGATGCCCGCTTGCTCTGCAGCTCCACTTCCGCACTaGGCTGTGCCGTCTCCAGGGCCACCTGCACTTGGCGTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: SLQRMPACSAAPLPH*AVPSPGPPALGVPA
Trigger: AGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGCAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CGCTTCCCGCTCGGCCTCTTCCTTCTGCTTCTCGGCATCGGCCTGTaGCAGGCTCTTCTGCTGTGCCACCTCTTCTGCCTGCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: RFPLGLFLLLLGIGL*QALLLCHLFCLQPQ
Trigger: CTGCGGCTGCAGGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAGAAGCAGAAGGAAGAGGCCGAGCGGGAAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CCTCCACCAAGCCCTTCTGCCGCTCCAGCTCGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCTCCTCGATGTCAGCCTTGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PPPSPSAAPARSLMP*AAGPGAPRCQPCAV
Trigger: CACTGCACAAGGCTGACATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CAGACACCACAGGGGTTTCAGGTGCCCCCTCCTCACGCTCCTTCCTaGGATAGACCTGCCGCTCCTCACGGGCAGGGTCCTCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: QTPQGFQVPPPHAPS*DRPAAPHGQGPQLA
Trigger: TGCCAGCTGAGGACCCTGCCCGTGAGGAGCGGCAGGTCTATCGCAGGAAGGAGCGTGAGGAGGGGGCACCTGAAACCCCTGTGGTGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
ENSMUST00000171634.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCT +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAFSRR*YSVRMA
Trigger: AGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGGACCTGTTCCAGCTaGCCCAGGGTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRTCSS*PRVSSN
Trigger: GTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGGACCTGTTCCAGCTaGCCCAGGGTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRTCSS*PRVSSN
Trigger: GTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTGGCTTCAAGCTCTaGGAGAGTGGCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGGFKL*ESGRHS
Trigger: GCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCTCTTGCCGCCTCTaGGCATCCTGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCSCRL*ASCSQA
Trigger: CGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCTCTTGCCGCCTCTaGGCATCCTGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCSCRL*ASCSQA
Trigger: CGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACTCCTCTGCCCGCTGTaGCTCAGCCAGCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGALLCPL*LSQPLL
Trigger: GAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGAG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWASACR*RWLSSC
Trigger: GCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQASACR*RWLSSC
Trigger: GCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCAAAGGATGCCCGCTaGCTCTGCAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAKDAR*LCSSTS
Trigger: GGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCGCTCAGCCTCAGCTaGCTGCTGTGCCCGTCGCTC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSLSLS*LLCPSL
Trigger: GAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACAGGCGGATCAGCTCTaGCTCCGCAGCCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAQADQL*LRSQAL
Trigger: CAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASLSDA*RSWARR
Trigger: GCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCTCCAGCTCTGCCTaGCCCGCGGCGGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSSSA*PAAAFS
Trigger: TGAGAAAGCCGCCGCGGGCAAGGCAGAGCTGGAGCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGCTCCAGCTCTGCCTaGCCCGCGGCGGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSSSA*PAAAFS
Trigger: TGAGAAAGCCGCCGCGGGCAAGGCAGAGCTGGAGCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCTGCTCCGCTTCCTaGCGCAGCTTCTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSCSAS*RSFSAA
Trigger: GGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTTCAATGCGAGCCTaGAGCTTGCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMASMRA*SLPSSS
Trigger: GGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCAGTTCCTCTTGCTaGCGCCTCACGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCSSSC*RLTPSS
Trigger: TGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCAGTTCCTCTTGCTaGCGCCTCACGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCSSSC*RLTPSS
Trigger: TGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGASRP*GSAFVE
Trigger: TTCCACGAAGGCACTGCCCAACGGCCGGGATGCACC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGASRP*GSAFVE
Trigger: TTCCACGAAGGCACTGCCCAACGGCCGGGATGCACC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTCTGCTGAGGATCTaGGCGTCCAGGAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDALLRI*ASRSSL
Trigger: CAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTCTGCTGAGGATCTaGGCGTCCAGGAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMALLRI*ASRSSL
Trigger: CAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCCTCGTCCATGACTaGAGAGCGTACCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGLVHD*RAYQLL
Trigger: GAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTCGTCCATGACTaGAGAGCGTACCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGLVHD*RAYQLL
Trigger: GAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGGAAGCCACCGGCATaGCCTGAGAGCATGTCAGCA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRKPPA*PESMSA
Trigger: TGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGGAAGCCACCGGCATaGCCTGAGAGCATGTCAGCA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRKPPA*PESMSA
Trigger: TGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCACCAGGCCCTTGTaGACAGCTTCAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSTRPL*TASVTG
Trigger: CCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCATGACCTGTAGATaGGTGACGCCGGGCACATGG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRMTCR*VTPGTW
Trigger: CCATGTGCCCGGCGTCACCAATCTACAGGTCATGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS GCA 90 bp GCCTCAGCTTCAGCCTTCACACGCAGGGCCAGCTCTGCCTCTGCCTaGCGTTTGCGCTGGCTCTCATCCTGCACCTGCCTTCGCAAGCGT +
Preference number: 5 (lower is better)
Translates to: ASASAFTRRASSASA*RLRWLSSCTCLRKR
Trigger: ACGCTTGCGAAGGCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGTGTGAAGGCTGAAGCTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CGCTGCCTCAGCTTCAGCCTTCACACGCAGGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCTCTCATCCTGCACCTGCCTTCGCAA +
Preference number: 5 (lower is better)
Translates to: RCLSFSLHTQGQLCL*LPFALALILHLPSQ
Trigger: TTGCGAAGGCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGTGTGAAGGCTGAAGCTGAGGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CTTTCTCCTTCGAGTCCTCCAGATAGATGCCGGCCAGGCAGCCGCTaGCCTGCAGCAGAGTCCGCACGGAGCCCACCTCGGACAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LSPSSPPDRCRPGSR*PAAESARSPPRTAL
Trigger: AAGAGCTGTCCGAGGTGGGCTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCTGGCCGGCATCTATCTGGAGGACTCGAAGGAGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp ACATCACGCAGCTTCTGGGCTGTGCGGGCATCCACAGTGCCACGTTaGAGAGCTTCGTCGAGAGACACACGGCCGGGCGTGTCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: TSRSFWAVRASTVPR*RASSRDTRPGVSGS
Trigger: CGAGCCTGACACGCCCGGCCGTGTGTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp ATGGCACGCATGACCTGTAGATTGGTGACGCCGGGCACATGGGGATaGAGGCTGCGGGGTCGCCGGTCCTTCTTGGCAACCATCACCCCC +
Preference number: 5 (lower is better)
Translates to: MARMTCRLVTPGTWG*RLRGRRSFLATITP
Trigger: GGGGGTGATGGTTGCCAAGAAGGACCGGCGACCCCGCAGCCTGCATCCCCATGTGCCCGGCGTCACCAATCTACAGGTCATGCGTGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
ENSMUST00000171634.8
CDS CCA 90 bp GTCTGCAAGGCAGCCTGGAAGGACTCCACCGTGGGCCGGGCAGGATaGTCTTCCCGCAGCAGCCTGTCCCCTGTGTTCTGGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: VCKAAWKDSTVGRAG*SSRSSLSPVFWISL
Trigger: CAAGGAGATCCAGAACACAGGGGACAGGCTGCTGCGGGAAGACCATCCTGCCCGGCCCACGGTGGAGTCCTTCCAGGCTGCCTTGCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 90 bp GCTGCTGTGCCTCGGCCTGGGCCCGCAGCTTCTTTAGTGAGGCCTTaGTGGCTTCAAGCTCTTGGAGAGTGGCAGGCACAGCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: AAVPRPGPAASLVRP*WLQALGEWQAQPGP
Trigger: AGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACCAAGGCCTCACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp TCCTCCTGCATGCGCCGCTGCAGTTCTTGTGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGTGCCTCAGCTAGCTGCCGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SSCMRRCSSCASSSA*ALAWACASASCRCF
Trigger: GAAGCAGCGGCAGCTAGCTGAGGCACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAAGAACTGCAGCGGCGCATGCAGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGCAGGGAGATGAGGTaGTGGCCATCACGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSREMR*WPSRRS
Trigger: AGACCTCCGTGATGGCCACAACCTCATCTCCCTGCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGGCCGAGGGTCAGCTaGGGGTTGCCGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRPRVS*GLPSAM
Trigger: CATTGCTGACGGCAACCCCAAGCTGACCCTCGGCCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGCCGAGGGTCAGCTaGGGGTTGCCGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRPRVS*GLPSAM
Trigger: CATTGCTGACGGCAACCCCAAGCTGACCCTCGGCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGGTGGATGATAGCATaGAAGAGACGGCCATCGCGC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRWMIA*KRRPSR
Trigger: GCGCGATGGCCGTCTCTTCAATGCTATCATCCACCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGGTGGATGATAGCATaGAAGAGACGGCCATCGCGC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRWMIA*KRRPSR
Trigger: GCGCGATGGCCGTCTCTTCAATGCTATCATCCACCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTGGTGCCGGATCCATaGCAGCAGCAGCAACACAAG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVVPDP*QQQQHK
Trigger: CTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGTGCCGGATCCATaGCAGCAGCAGCAACACAAG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDVVPDP*QQQQHK
Trigger: CTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCAC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMKLEGN*RSSKAA
Trigger: CGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATGGCCACATGCAGCTaGCCCCACTCCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMMATCS*PHSFST
Trigger: TGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATGGCCACATGCAGCTaGCCCCACTCCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDMATCS*PHSFST
Trigger: TGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGGCCAGCAGGTCTaGCAGGTAGCGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPGQQV*QVAQCG
Trigger: TCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGGCATTGGTCACCCTaGTGCACAGTCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDWHWSP*CTVTST
Trigger: GGTGGAGGTGACTGTGCACAAGGGTGACCAATGCCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGGCATTGGTCACCCTaGTGCACAGTCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMWHWSP*CTVTST
Trigger: GGTGGAGGTGACTGTGCACAAGGGTGACCAATGCCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACCCACCAGCTGGCATaGGTCACCCTTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTHQLA*VTLVHS
Trigger: ACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACCCACCAGCTGGCATaGGTCACCCTTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTHQLA*VTLVHS
Trigger: ACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCTGGGCCTCCTGGTaGGGCGGCGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASWASW*GGGTRK
Trigger: CTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQVAQS*SLLLGL
Trigger: AAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQQVAQS*SLLLGL
Trigger: AAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTGCAGCCGGATATCCTaGAGCTCCGAGATGCATCGC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDCSRIS*SSEMHR
Trigger: GCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTGCAGCCGGATATCCTaGAGCTCCGAGATGCATCGC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMCSRIS*SSEMHR
Trigger: GCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCTCTTGCCGCCTCTaGGCATCCTGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGACSCRL*ASCSQA
Trigger: CGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCTCCTCTGCCCGCTGTaGCTCAGCCAGCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSLLCPL*LSQPLL
Trigger: GAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGAG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCGCTCAGCCTCAGCTaGCTGCTGTGCCCGTCGCTC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASLSLS*LLCPSL
Trigger: GAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAGGCGGATCAGCTCTaGCTCCGCAGCCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQADQL*LRSQAL
Trigger: CAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAACTGCCTCTGCCTCTaGGCCTCCTCCGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWNCLCL*ASSARA
Trigger: TGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAACTGCCTCTGCCTCTaGGCCTCCTCCGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQNCLCL*ASSARA
Trigger: TGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCTCGATGTCAGCCTaGTGCAGTGCCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSMSA*CSAACS
Trigger: GGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSLSDA*RSWARR
Trigger: GCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSLSDA*RSWARR
Trigger: GCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSLSDA*RSWARR
Trigger: GCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGCTCCAGCTCTGCCTaGCCCGCGGCGGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSSSA*PAAAFS
Trigger: TGAGAAAGCCGCCGCGGGCAAGGCAGAGCTGGAGCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATTGTGTCCTCCGCGTaGCTGCGAATGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWIVSSA*LRMRPS
Trigger: GCTGGGGCGCATTCGCAGCAACGCGGAGGACACAAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATTGTGTCCTCCGCGTaGCTGCGAATGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQIVSSA*LRMRPS
Trigger: GCTGGGGCGCATTCGCAGCAACGCGGAGGACACAAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAPCCA*CPPRCC
Trigger: GCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSTLA*SRSTSS
Trigger: GGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSTLA*SRSTSS
Trigger: GGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCTGCTCCGCTTCCTaGCGCAGCTTCTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASCSAS*RSFSAA
Trigger: GGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRCVLS*SRRMRA
Trigger: GGCCCTCATCCTTCGTGACAAGGACAACACACAGCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRCVLS*SRRMRA
Trigger: GGCCCTCATCCTTCGTGACAAGGACAACACACAGCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGASRP*GSAFVE
Trigger: TTCCACGAAGGCACTGCCCAACGGCCGGGATGCACC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCAGCTGACAGCAGTTaGTGGTGCAGCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSADSS*WCSSGP
Trigger: GGGTCCTGAGCTGCACCACAAACTGCTGTCAGCTGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGCACACGGTGGCTTTaGCTGGGGTCTACAATGCCA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGTRWL*LGSTMP
Trigger: TGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGACCGGCACCGCTGTaGGAGCTGGCTGTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRPAPL*ELAVGD
Trigger: GTCACCTACAGCCAGCTCCAACAGCGGTGCCGGTCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACAGGAACCTCAACCTaGGCCTGCTCCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTGTST*ACSSVS
Trigger: GGAGACACTGGAGCAGGCCAAGGTTGAGGTTCCTGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTCTTCTCTGCCCCTTaGAGTGGCAGGAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVFSAP*SGRRRR
Trigger: CCTGCGCCTCCTGCCACTCAAAGGGGCAGAGAAGAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDIEVAA*VSHLQR
Trigger: CCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMIEVAA*VSHLQR
Trigger: CCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQITTRR*RTEDLE
Trigger: CTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWITTRR*RTEDLE
Trigger: CTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATGTTGTCTACCAGGTaGCGGTGCATGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDMLSTR*RCMASV
Trigger: CACGGAGGCCATGCACCGCAACCTGGTAGACAACAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATGTTGTCTACCAGGTaGCGGTGCATGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMMLSTR*RCMASV
Trigger: CACGGAGGCCATGCACCGCAACCTGGTAGACAACAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCCCCGGTGCAGGCTaGGGCCTCCAGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAPGAG*GLQQPL
Trigger: CAGCGGCTGCTGGAGGCCCAAGCCTGCACCGGGGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCAAGACGCTCCCATaGCCCACAGAACCACCTCCA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSKTLP*PTEPPP
Trigger: TGGAGGTGGTTCTGTGGGCAATGGGAGCGTCTTGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000089610.10
CDS TCA 90 bp CAAGAAAGCACACAGAAGGCACAGCGGCCTCGCTGCTGGAACCACTaGGCACCTTCCAGTGGGATGGCTGGGCAGGACCCACCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: QESTQKAQRPRCWNH*APSSGMAGQDPPAG
Trigger: GCCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGTGCTCAGTGGTTCCAGCAGCGAGGCCGCTGTGCCTTCTGTGTGCTTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp CGATGCCCCTTACGCCAGTGCCATACGGCAGCCAGAGTGACAACATaGCCCACGACTACCAGGGAGGGAAACAGGCTGCCCGACGGCTCC +
Preference number: 5 (lower is better)
Translates to: RCPLRQCHTAARVTT*PTTTREGNRLPDGS
Trigger: GGAGCCGTCGGGCAGCCTGTTTCCCTCCCTGGTAGTCGTGGGTCATGTTGTCACTCTGGCTGCCGTATGGCACTGGCGTAAGGGGCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000165453.8
ENSMUST00000169714.8
CDS GCA 90 bp TGCAGCAGCAGCAACACAAGCTCCCGGTACTCCTGCCAACGAAGCTaGAGCTCATTGGCCCTCACTCCGTCCTGTGCACCAGGCACGCGG +
Preference number: 5 (lower is better)
Translates to: CSSSNTSSRYSCQRS*SSLALTPSCAPGTR
Trigger: CCGCGTGCCTGGTGCACAGGACGGAGTGAGGGCCAATGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCTTGTGTTGCTGCTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp CCTTGTCCAGGTCTCTCTCGACTTCCCCAGCTCGCTGAGCCACCTTaGCTGAGGCCAGCAGCCGAATATCCGACTGCAGTAGGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: PCPGLSRLPQLAEPP*LRPAAEYPTAVGRP
Trigger: CGGACGCCCTACTGCAGTCGGATATTCGGCTGCTGGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGTCGAGAGAGACCTGGACAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp CTGTGTACTCTGCAGGGTCACCTGGGTCACAGGGGCACCCACTCCTaGCTTCAGCCGGAGGTTGTACTCAGTGCGGATGGCTACCAGGCG +
Preference number: 5 (lower is better)
Translates to: LCTLQGHLGHRGTHS*LQPEVVLSADGYQA
Trigger: CGCCTGGTAGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAGTACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp TGGGCCTTGGCCTGGATCTCTGCCTCCGAGCTCTGCCTCAGGTGCTaGAGCTCCTCTTGGATGCTGCGCTTCTGCTGCTGTGCGTCCACT +
Preference number: 5 (lower is better)
Translates to: WALAWISASELCLRC*SSSWMLRFCCCAST
Trigger: AGTGGACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCACCTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CGCTCCAATTGTGCGGTCTTCTCTGCAAAGGATGCCCGCTTGCTCTaGAGCTCCACTTCCGCACTGCGCTGTGCCGTCTCCAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: RSNCAVFSAKDARLL*SSTSALRCAVSRAT
Trigger: GGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGCAGAGAAGACCGCACAATTGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGTGCCCGTCGCTCGGCCTCCTCCCGCAGCTGGGCCACTGTTACATaGTCCTCCTGCAGAGTGCGCTCCAATTGTGCGGTCTTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: CARRSASSRSWATVT*SSCRVRSNCAVFSA
Trigger: TGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCAGCTGCGGGAGGAGGCCGAGCGACGGGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CTCTTCCTCGGCTCGCGCCTTGCTGGCCAGAAGTACCTCCATCTCTaGCCGGACCTTAGCCAGTTCAGCCTCCAGCTCCTGGCGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LFLGSRLAGQKYLHL*PDLSQFSLQLLALL
Trigger: CAGAAGCGCCAGGAGCTGGAGGCTGAACTGGCTAAGGTCCGGGCAGAGATGGAGGTACTTCTGGCCAGCAAGGCGCGAGCCGAGGAAGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp GGTCTCGTTCATCTACACAACAGAGTTGCCCGTAGAGGTAGCCCCTaGGGACCTGCTCGCAGCCCCCATCCAGCCAGCAGGGACGCTCCA +
Preference number: 5 (lower is better)
Translates to: GLVHLHNRVARRGSP*GPARSPHPASRDAP
Trigger: TGGAGCGTCCCTGCTGGCTGGATGGGGGCTGCGAGCAGGTCCGCAGGGGCTACCTCTACGGGCAACTCTGTTGTGTAGATGAACGAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072692.11
CDS CCA 90 bp GAGTCCTCTAGCTCTGGGCGCCTCTGTGTACTCTGCAGGGTCACCTaGGTCACAGGGGCACCCACTCCTGCCTTCAGCCGGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: ESSSSGRLCVLCRVT*VTGAPTPAFSRRLY
Trigger: GTACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCGCCCAGAGCTAGAGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 90 bp TCACGCTCCAGCTCCGCAATGGCCTCCCTCAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGGATCTCCAGCGTCTGCACCAACGTC +
Preference number: 5 (lower is better)
Translates to: SRSSSAMASLRRSAS*SLCCRWISSVCTNV
Trigger: GACGTTGGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCTGAGGGAGGCCATTGCGGAGCTGGAGCGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp AGCTCTGCGGCGGGCACGAGGGCACGGAGGCCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCCTCCACCACTGTGATGACGATTTTG +
Preference number: 5 (lower is better)
Translates to: SSAAGTRARRPSKQS*PFRSCSSTTVMTIL
Trigger: CAAAATCGTCATCACAGTGGTGGAGGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGGCCTCCGTGCCCTCGTGCCCGCCGCAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp GAAGCCATGGCACGCATGACCTGTAGATTGGTGACGCCGGGCACATaGGGATGCAGGCTGCGGGGTCGCCGGTCCTTCTTGGCAACCATC +
Preference number: 5 (lower is better)
Translates to: EAMARMTCRLVTPGT*GCRLRGRRSFLATI
Trigger: GATGGTTGCCAAGAAGGACCGGCGACCCCGCAGCCTGCATCCCCATGTGCCCGGCGTCACCAATCTACAGGTCATGCGTGCCATGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
ENSMUST00000171634.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTCGTTCATCTTTCTaGCCCTCGGAGGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSRSSF*PSEALS
Trigger: GCTCAGAGCCTCCGAGGGCAAGAAAGATGAACGAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023226.13
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATAGGGTCAGCTTGGGGTaGCCGTCAGCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRVSLG*PSAMSS
Trigger: TGATGACATTGCTGACGGCAACCCCAAGCTGACCCT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGGCCGAGGGTCAGCTaGGGGTTGCCGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARPRVS*GLPSAM
Trigger: CATTGCTGACGGCAACCCCAAGCTGACCCTCGGCCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCAGCAGCTTCTCCTTaGCTGTCATGTCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAAASP*LSCPPT
Trigger: AGTCGGAGGACATGACAGCAAAGGAGAAGCTGCTGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAAACTCGCTTCGCAGTaGCTTCTCCCGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMKLASQ*LLPLQD
Trigger: ATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTTT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCT +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAFSRR*YSVRMA
Trigger: AGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCT +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAFSRR*YSVRMA
Trigger: AGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCAGGCCAGCAGGTCTaGCAGGTAGCGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPGQQV*QVAQCG
Trigger: TCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGAGCCCGCTCGATCTaGGCCCGAAATTCCTCTATA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRARSI*ARNSSI
Trigger: TATAGAGGAATTTCGGGCCAAGATCGAGCGGGCTCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAACTGCACAATAGCCTaGGCCCGCTTGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWNCTIA*ARLARP
Trigger: AGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTGGGCCTCCTGGTaGGGCGGCGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSWASW*GGGTRK
Trigger: CTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCTGGGCCTCCTGGTaGGGCGGCGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSWASW*GGGTRK
Trigger: CTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCTGGGCCTCCTGGTaGGGCGGCGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSWASW*GGGTRK
Trigger: CTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAQVAQS*SLLLGL
Trigger: AAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGGACCTGTTCCAGCTaGCCCAGGGTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRTCSS*PRVSSN
Trigger: GTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGTGGCTTCAAGCTCTaGGAGAGTGGCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGGFKL*ESGRHS
Trigger: GCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCTCTTGCCGCCTCTaGGCATCCTGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCSCRL*ASCSQA
Trigger: CGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCTCTTGCCGCCTCTaGGCATCCTGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCSCRL*ASCSQA
Trigger: CGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCTCTTGCCGCCTCTaGGCATCCTGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCSCRL*ASCSQA
Trigger: CGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVASACR*RWLSSC
Trigger: GCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASACR*RWLSSC
Trigger: GCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCAAAGGATGCCCGCTaGCTCTGCAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAKDAR*LCSSTS
Trigger: GGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCGCTCAGCCTCAGCTaGCTGCTGTGCCCGTCGCTC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSLSLS*LLCPSL
Trigger: GAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCGCTCAGCCTCAGCTaGCTGCTGTGCCCGTCGCTC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSLSLS*LLCPSL
Trigger: GAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSASFS*SAISAS
Trigger: GGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSASFS*SAISAS
Trigger: GGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCTCGATGTCAGCCTaGTGCAGTGCCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSMSA*CSAACS
Trigger: GGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSLSDA*RSWARR
Trigger: GCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGCTCCAGCTCTGCCTaGCCCGCGGCGGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSSSA*PAAAFS
Trigger: TGAGAAAGCCGCCGCGGGCAAGGCAGAGCTGGAGCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCTCCAGCTCTGCCTaGCCCGCGGCGGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSSSA*PAAAFS
Trigger: TGAGAAAGCCGCCGCGGGCAAGGCAGAGCTGGAGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGCTCCAGCTCTGCCTaGCCCGCGGCGGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSSSA*PAAAFS
Trigger: TGAGAAAGCCGCCGCGGGCAAGGCAGAGCTGGAGCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAPCCA*CPPRCC
Trigger: GCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCTGCTCCGCTTCCTaGCGCAGCTTCTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSCSAS*RSFSAA
Trigger: GGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTGCTCCGCTTCCTaGCGCAGCTTCTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSCSAS*RSFSAA
Trigger: GGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTTCAATGCGAGCCTaGAGCTTGCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQASMRA*SLPSSS
Trigger: GGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCAACTGCTGAGCCATTaGCTCCTTGTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDQLLSH*LLVLLQ
Trigger: CTGCAGGAGGACAAGGAGCAAATGGCTCAGCAGTTG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGCAGTTCCTCTTGCTaGCGCCTCACGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQCSSSC*RLTPSS
Trigger: TGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGASRP*GSAFVE
Trigger: TTCCACGAAGGCACTGCCCAACGGCCGGGATGCACC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGASRP*GSAFVE
Trigger: TTCCACGAAGGCACTGCCCAACGGCCGGGATGCACC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGASRP*GSAFVE
Trigger: TTCCACGAAGGCACTGCCCAACGGCCGGGATGCACC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCCTTCACAGCCTCATaGACTGTCAGCCGCCGATTC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSFTAS*TVSRRF
Trigger: GAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCCTTCACAGCCTCATaGACTGTCAGCCGCCGATTC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSFTAS*TVSRRF
Trigger: GAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGACCGGCACCGCTGTaGGAGCTGGCTGTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARPAPL*ELAVGD
Trigger: GTCACCTACAGCCAGCTCCAACAGCGGTGCCGGTCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTCTGCTGAGGATCTaGGCGTCCAGGAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQALLRI*ASRSSL
Trigger: CAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCTCTGCTGAGGATCTaGGCGTCCAGGAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWALLRI*ASRSSL
Trigger: CAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATGGACATACAGACGTaGGTTCCGCACAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDMDIQT*VPHRVH
Trigger: GTGGACCCTGTGCGGAACCAACGTCTGTATGTCCAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATGGACATACAGACGTaGGTTCCGCACAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMMDIQT*VPHRVH
Trigger: GTGGACCCTGTGCGGAACCAACGTCTGTATGTCCAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTTGGTGTCATCACTaGGATCTGCCAGCACACGGT +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPWCHH*DLPAHG
Trigger: ACCGTGTGCTGGCAGATCCAAGTGATGACACCAAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTTGGTGTCATCACTaGGATCTGCCAGCACACGGT +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPWCHH*DLPAHG
Trigger: ACCGTGTGCTGGCAGATCCAAGTGATGACACCAAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTCCGGGATCATGTTaGACTGCATCACCTCCCACA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPPGSC*TASPPT
Trigger: TGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCCTCCGGGATCATGTTaGACTGCATCACCTCCCACA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDPPGSC*TASPPT
Trigger: TGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCCTCGTCCATGACTaGAGAGCGTACCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGLVHD*RAYQLL
Trigger: GAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCCTCGTCCATGACTaGAGAGCGTACCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGLVHD*RAYQLL
Trigger: GAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTTCCACCGTCAGCTaGAGTCCCTTGATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSSTVS*SPLMGS
Trigger: TGACCCCATCAAGGGACTCAAGCTGACGGTGGAAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTTCCACCGTCAGCTaGAGTCCCTTGATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSSTVS*SPLMGS
Trigger: TGACCCCATCAAGGGACTCAAGCTGACGGTGGAAGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCAGCTGACAGCAGCTaGTCCTTGAACTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSADSS*SLNSGP
Trigger: GGGCCCCGAGTTCAAGGACAAGCTGCTGTCAGCTGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTGCGCACTGAGGACTaGGAGGATGTCTTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLRTED*EDVFRS
Trigger: GGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAITTRR*RTEDLE
Trigger: CTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGGAAGCCACCGGCATaGCCTGAGAGCATGTCAGCA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRKPPA*PESMSA
Trigger: TGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCCACCAGGCCCTTGTaGACAGCTTCAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSTRPL*TASVTG
Trigger: CCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCCACCAGGCCCTTGTaGACAGCTTCAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSTRPL*TASVTG
Trigger: CCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDLSTRP*LTASVT
Trigger: GGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMLSTRP*LTASVT
Trigger: GGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATCGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDRSTMI*STRPLL
Trigger: CAACAAGGGCCTGGTGGACAAGATCATGGTAGACCG...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRSTMI*STRPLL
Trigger: CAACAAGGGCCTGGTGGACAAGATCATGGTAGACCG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCTGACATCTTGGTCTaGGTGCGTGGGTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMADILV*VRGSSN
Trigger: GTTTGAGGACCCACGCACCAAGACCAAGATGTCAGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCTGACATCTTGGTCTaGGTGCGTGGGTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDADILV*VRGSSN
Trigger: GTTTGAGGACCCACGCACCAAGACCAAGATGTCAGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGGCAGCTGACATCTaGGTCTTGGTGCGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWAADI*VLVRGS
Trigger: GGACCCACGCACCAAGACCAAGATGTCAGCTGCCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGGCAGCTGACATCTaGGTCTTGGTGCGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWAADI*VLVRGS
Trigger: GGACCCACGCACCAAGACCAAGATGTCAGCTGCCCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGTCGCCGGTCCTTCTaGGCAACCATCACCCCCTCA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGRRSF*ATITPS
Trigger: TGAGGGGGTGATGGTTGCCAAGAAGGACCGGCGACC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS TCA 90 bp CCTCGTCCTGGAAGAGCTGCTCCAGCTTGGCCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCAGGCTGTCCTTCTCAGAGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: PRPGRAAPAWPSPAR*SARAAAGCPSQRGS
Trigger: GCTTCCTCTCTGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTTCCAGGACGAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp TGCTGCTGCGGCCCTTCAGGTACCGGTACACATCTTCCCGCTGCGTaGGCTCAGCCACCGTGGTGTGACCCTGTGCCAAACGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: CCCGPSGTGTHLPAA*AQPPWCDPVPNAAV
Trigger: AACTGCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTACCGGTACCTGAAGGGCCGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp TGCGCACCTCGCTGGGCTCCGACAGCTGGTCGTGCGTGTCCTTATTaGGGTAGCCGCGTTGGTAAGCCACCTCCAGAGGGAGGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: CAPRWAPTAGRACPY*GSRVGKPPPEGGGN
Trigger: GTTTCCACCTCCCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAATAAGGACACGCACGACCAGCTGTCGGAGCCCAGCGAGGTGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp TTGCCTGCCGATGCCCCTTACGCCAGTGCCATACGGCAGCCAGAGTaGCAACATGACCCACGACTACCAGGGAGGGAAACAGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LPADAPYASAIRQPE*QHDPRLPGRETGCP
Trigger: CGGGCAGCCTGTTTCCCTCCCTGGTAGTCGTGGGTCATGTTGTCACTCTGGCTGCCGTATGGCACTGGCGTAAGGGGCATCGGCAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000165453.8
ENSMUST00000169714.8
CDS GCA 90 bp TCACAGGGGCACCCACTCCTGCCTTCAGCCGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCTCATGCAGACGATACACCCTCCGGT +
Preference number: 5 (lower is better)
Translates to: SQGHPLLPSAGGCTQ*GWLPGAHADDTPSG
Trigger: ACCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp TCATTCAGCCACATCAGCTCCTTGGTAGCTGCCGCCACAAACCCGTaGAAGCTCTCCAGGGACCGGAGGCGGGCCTTGGAGGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SFSHISSLVAAATNP*KLSRDRRRALEEFS
Trigger: GCTGAACTCCTCCAAGGCCCGCCTCCGGTCCCTGGAGAGCTTGCACGGGTTTGTGGCGGCAGCTACCAAGGAGCTGATGTGGCTGAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp GCTTCAATGCAGCAACACAGCTGCAGCATCCAGCTCCACTGTGTCTaGAAGGCAGCCTGGAAGGACTCCACCGTGGGCCGGGCAGGATGG +
Preference number: 5 (lower is better)
Translates to: ASMQQHSCSIQLHCV*KAAWKDSTVGRAGW
Trigger: CCATCCTGCCCGGCCCACGGTGGAGTCCTTCCAGGCTGCCTTGCAGACACAGTGGAGCTGGATGCTGCAGCTGTGTTGCTGCATTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp CTTCAGCCTTCACACGCAGGGCCAGCTCTGCCTCTGCCTGCCGTTTaGGCTGGCTCTCATCCTGCACCTGCCTTCGCAAGCGTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: LQPSHAGPALPLPAV*AGSHPAPAFASVQL
Trigger: AAGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGTGTGAAGGCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TTCCTTCTGCTTCTCGGCATCGGCCTGTGCCAGGCTCTTCTGCTGTaGCACCTCTTCTGCCTGCAGCCGCAGCCGCAGTGCTTCATTGGC +
Preference number: 5 (lower is better)
Translates to: FLLLLGIGLCQALLL*HLFCLQPQPQCFIG
Trigger: GCCAATGAAGCACTGCGGCTGCGGCTGCAGGCAGAAGAGGTGGCACAGCAGAAGAGCCTGGCACAGGCCGATGCCGAGAAGCAGAAGGAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp ATCTGCACACGGACAGAGAAGAGCTCCTCCTCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACCTCGGCCTTTAGTCGCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ICTRTEKSSSSTWLR*RAASVTSAFSRCSS
Trigger: GGAGCTGCAGCGACTAAAGGCCGAGGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCTCTTCTCTGTCCGTGTGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CCTCCATCTGCACACGGACAGAGAAGAGCTCCTCCTCTACCTGGCTaGGCTGCCGGGCTGCCTCTGTTACCTCGGCCTTTAGTCGCTGCA +
Preference number: 5 (lower is better)
Translates to: PPSAHGQRRAPPLPG*AAGLPLLPRPLVAA
Trigger: TGCAGCGACTAAAGGCCGAGGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCTCTTCTCTGTCCGTGTGCAGATGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp AGCTCCGCAATGGCCTCCCTCAGACGCTCGGCATCGTGGTCACTCTaGTGTCGCTGGATCTCCAGCGTCTGCACCAACGTCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SSAMASLRRSASWSL*CRWISSVCTNVTFS
Trigger: GGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCTGAGGGAGGCCATTGCGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CGCTCGCGCTGCAGCAGGCTGTCCTTCTCAGAGAGGAAGCTCTTCTaGAGGGCCTGGGTCTCCTGCAGTATCTGCTCCTGCTGCACAGTC +
Preference number: 5 (lower is better)
Translates to: RSRCSRLSFSERKLF*RAWVSCSICSCCTV
Trigger: GACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTCTGAGAAGGACAGCCTGCTGCAGCGCGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CACATCTTCCCGCTGCGTGAGCTCAGCCACCGTGGTGTGACCCTGTaGCAAACGCTGCAGTTCCTCCTGGCTCAGGATGCCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HIFPLRELSHRGVTL*QTLQFLLAQDACFL
Trigger: CAGGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGAGCTCACGCAGCGGGAAGATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CTGGCCGGCACAGGGGCACGGAGGCCACTAAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCCTCCACGATGGTGATGACAATCTTG +
Preference number: 5 (lower is better)
Translates to: LAGTGARRPLKDSLS*RRVSTSSTMVMTIL
Trigger: CAAGATTGTCATCACCATCGTGGAGGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTTTAGTGGCCTCCGTGCCCCTGTGCCGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp GACATGGAGGAGCCACCGTGGCTGCCACCACCCGGGATGTCAATCTaGGTCTCCTCGAACGCCCTCCGAGTCTCCTCCTCAGTATACACC +
Preference number: 5 (lower is better)
Translates to: DMEEPPWLPPPGMSI*VSSNALRVSSSVYT
Trigger: GGTGTATACTGAGGAGGAGACTCGGAGGGCGTTCGAGGAGACGCAGATTGACATCCCGGGTGGTGGCAGCCACGGTGGCTCCTCCATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp GACAGTTGGCTATTGGCACGGCCTGGATCTGCTCTTGCCGCCTCTTaGCATCCTGCAGCCAGGCGCTCAGAGGATCCGCGCTCTCACGAT +
Preference number: 5 (lower is better)
Translates to: DSWLLARPGSALAAS*HPAARRSEDPRSHD
Trigger: ATCGTGAGAGCGCGGATCCTCTGAGCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGCCAACTGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp CTTCTCCTGGCGCAGCTGTTCTCGCGCAGCCTGACAGTTGGCTATTaGCACGGCCTGGATCTGCTCTTGCCGCCTCTTGGCATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LLLAQLFSRSLTVGY*HGLDLLLPPLGILQ
Trigger: CTGCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGCCAACTGTCAGGCTGCGCGAGAACAGCTGCGCCAGGAGAAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp AGCTCCTCCATCTGCACACGGACAGAGAAGAGCTCCTCCTCTACCTaGCTGCGCTGCCGGGCTGCCTCTGTTACCTCGGCCTTTAGTCGC +
Preference number: 5 (lower is better)
Translates to: SSSICTRTEKSSSST*LRCRAASVTSAFSR
Trigger: GCGACTAAAGGCCGAGGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTGAGCTGGTTCTCTaGCTACCCAGGCCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASELVL*LPRPSG
Trigger: GCCGGAAGGCCTGGGTAGCAAGAGAACCAGCTCAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023226.13
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGGCCGAGGGTCAGCTaGGGGTTGCCGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRPRVS*GLPSAM
Trigger: CATTGCTGACGGCAACCCCAAGCTGACCCTCGGCCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGGCCGAGGGTCAGCTaGGGGTTGCCGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRPRVS*GLPSAM
Trigger: CATTGCTGACGGCAACCCCAAGCTGACCCTCGGCCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGGTGGATGATAGCATaGAAGAGACGGCCATCGCGC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRWMIA*KRRPSR
Trigger: GCGCGATGGCCGTCTCTTCAATGCTATCATCCACCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTGGTGCCGGATCCATaGCAGCAGCAGCAACACAAG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVVPDP*QQQQHK
Trigger: CTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWKLEGN*RSSKAA
Trigger: CGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQKLEGN*RSSKAA
Trigger: CGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGACTTTGGACCGGTTTTaGTCTGCCTCCTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMTLDRF*SASLAG
Trigger: TCCTGCCAAGGAGGCAGACAAAAACCGGTCCAAAGT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACTTTGGACCGGTTTTaGTCTGCCTCCTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTLDRF*SASLAG
Trigger: TCCTGCCAAGGAGGCAGACAAAAACCGGTCCAAAGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATGGCCACATGCAGCTaGCCCCACTCCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQMATCS*PHSFST
Trigger: TGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGGCCACATGCAGCTaGCCCCACTCCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMATCS*PHSFST
Trigger: TGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCT +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAFSRR*YSVRMA
Trigger: AGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCAGGCCAGCAGGTCTaGCAGGTAGCGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPGQQV*QVAQCG
Trigger: TCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCCAGGCCAGCAGGTCTaGCAGGTAGCGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVPGQQV*QVAQCG
Trigger: TCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGGAGTTCAGCAGCTTaGCATACTGCAGGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRSSAA*HTAGLG
Trigger: GCCTAGACCTGCAGTATGCAAAGCTGCTGAACTCCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTGAGAGGTGCCCCTaGTACTCATTCAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMPERCP*YSFSCS
Trigger: GGAACAACTGAATGAGTACAAGGGGCACCTCTCAGG...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGGCATTGGTCACCCTaGTGCACAGTCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWWHWSP*CTVTST
Trigger: GGTGGAGGTGACTGTGCACAAGGGTGACCAATGCCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTGGCATTGGTCACCCTaGTGCACAGTCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQWHWSP*CTVTST
Trigger: GGTGGAGGTGACTGTGCACAAGGGTGACCAATGCCA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACCCACCAGCTGGCATaGGTCACCCTTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTHQLA*VTLVHS
Trigger: ACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTGGGCCTCCTGGTaGGGCGGCGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSWASW*GGGTRK
Trigger: CTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQVAQS*SLLLGL
Trigger: AAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTGCAGCCGGATATCCTaGAGCTCCGAGATGCATCGC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWCSRIS*SSEMHR
Trigger: GCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGGACCTGTTCCAGCTaGCCCAGGGTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARTCSS*PRVSSN
Trigger: GTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGTGGCTTCAAGCTCTaGGAGAGTGGCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGGFKL*ESGRHS
Trigger: GCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCTCTTGCCGCCTCTaGGCATCCTGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCSCRL*ASCSQA
Trigger: CGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASACR*RWLSSC
Trigger: GCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAACTGCCTCTGCCTCTaGGCCTCCTCCGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVNCLCL*ASSARA
Trigger: TGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAACTGCCTCTGCCTCTaGGCCTCCTCCGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSNCLCL*ASSARA
Trigger: TGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAACTGCCTCTGCCTCTaGGCCTCCTCCGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKNCLCL*ASSARA
Trigger: TGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTCGATGTCAGCCTaGTGCAGTGCCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSMSA*CSAACS
Trigger: GGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCCTCGATGTCAGCCTaGTGCAGTGCCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSMSA*CSAACS
Trigger: GGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCTCCAGCTCTGCCTaGCCCGCGGCGGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSSSA*PAAAFS
Trigger: TGAGAAAGCCGCCGCGGGCAAGGCAGAGCTGGAGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATTGTGTCCTCCGCGTaGCTGCGAATGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSIVSSA*LRMRPS
Trigger: GCTGGGGCGCATTCGCAGCAACGCGGAGGACACAAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATTGTGTCCTCCGCGTaGCTGCGAATGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVIVSSA*LRMRPS
Trigger: GCTGGGGCGCATTCGCAGCAACGCGGAGGACACAAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATTGTGTCCTCCGCGTaGCTGCGAATGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKIVSSA*LRMRPS
Trigger: GCTGGGGCGCATTCGCAGCAACGCGGAGGACACAAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAPCCA*CPPRCC
Trigger: GCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAPCCA*CPPRCC
Trigger: GCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAPCCA*CPPRCC
Trigger: GCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSTLA*SRSTSS
Trigger: GGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSTLA*SRSTSS
Trigger: GGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTGCTCCGCTTCCTaGCGCAGCTTCTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSCSAS*RSFSAA
Trigger: GGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTTCAATGCGAGCCTaGAGCTTGCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAASMRA*SLPSSS
Trigger: GGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRCVLS*SRRMRA
Trigger: GGCCCTCATCCTTCGTGACAAGGACAACACACAGCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRCVLS*SRRMRA
Trigger: GGCCCTCATCCTTCGTGACAAGGACAACACACAGCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRKRCV*SLSRRM
Trigger: CATCCTTCGTGACAAGGACAACACACAGCGCTTCCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAAGAGCTGCTCCAGCTaGGCCTTCTCCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWKSCSS*AFSCSM
Trigger: CATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAAGAGCTGCTCCAGCTaGGCCTTCTCCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQKSCSS*AFSCSM
Trigger: CATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGASRP*GSAFVE
Trigger: TTCCACGAAGGCACTGCCCAACGGCCGGGATGCACC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCAGCTGACAGCAGTTaGTGGTGCAGCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSADSS*WCSSGP
Trigger: GGGTCCTGAGCTGCACCACAAACTGCTGTCAGCTGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGCACACGGTGGCTTTaGCTGGGGTCTACAATGCCA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGTRWL*LGSTMP
Trigger: TGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGCACACGGTGGCTTTaGCTGGGGTCTACAATGCCA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGTRWL*LGSTMP
Trigger: TGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGACCGGCACCGCTGTaGGAGCTGGCTGTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRPAPL*ELAVGD
Trigger: GTCACCTACAGCCAGCTCCAACAGCGGTGCCGGTCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGACCGGCACCGCTGTaGGAGCTGGCTGTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRPAPL*ELAVGD
Trigger: GTCACCTACAGCCAGCTCCAACAGCGGTGCCGGTCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACAGGAACCTCAACCTaGGCCTGCTCCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTGTST*ACSSVS
Trigger: GGAGACACTGGAGCAGGCCAAGGTTGAGGTTCCTGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTCTGCTGAGGATCTaGGCGTCCAGGAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAALLRI*ASRSSL
Trigger: CAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACCTCGGACAGCTCTTaGACTGATGTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTSDSS*TDVLPS
Trigger: GGATGGCAAGACATCAGTCAAAGAGCTGTCCGAGGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGTCTTCTCTGCCCCTTaGAGTGGCAGGAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVVFSAP*SGRRRR
Trigger: CCTGCGCCTCCTGCCACTCAAAGGGGCAGAGAAGAC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTCTTCTCTGCCCCTTaGAGTGGCAGGAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVFSAP*SGRRRR
Trigger: CCTGCGCCTCCTGCCACTCAAAGGGGCAGAGAAGAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTCTTCTCTGCCCCTTaGAGTGGCAGGAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVFSAP*SGRRRR
Trigger: CCTGCGCCTCCTGCCACTCAAAGGGGCAGAGAAGAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGCCTCGTCCATGACTaGAGAGCGTACCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGLVHD*RAYQLL
Trigger: GAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACT +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTESRS*VASTKT
Trigger: AGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCAGCTGACAGCAGCTaGTCCTTGAACTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASADSS*SLNSGP
Trigger: GGGCCCCGAGTTCAAGGACAAGCTGCTGTCAGCTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSITTRR*RTEDLE
Trigger: CTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVITTRR*RTEDLE
Trigger: CTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGGAAGCCACCGGCATaGCCTGAGAGCATGTCAGCA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARKPPA*PESMSA
Trigger: TGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGTTGTCTACCAGGTaGCGGTGCATGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMLSTR*RCMASV
Trigger: CACGGAGGCCATGCACCGCAACCTGGTAGACAACAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATGTTGTCTACCAGGTaGCGGTGCATGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQMLSTR*RCMASV
Trigger: CACGGAGGCCATGCACCGCAACCTGGTAGACAACAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGCCTTCTGGGCCAGATaGATACGGTCTACCATGATC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMAFWAR*IRSTMI
Trigger: GATCATGGTAGACCGTATCAATCTGGCCCAGAAGGC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGCCTTCTGGGCCAGATaGATACGGTCTACCATGATC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDAFWAR*IRSTMI
Trigger: GATCATGGTAGACCGTATCAATCTGGCCCAGAAGGC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGGCAGCTGACATCTaGGTCTTGGTGCGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWAADI*VLVRGS
Trigger: GGACCCACGCACCAAGACCAAGATGTCAGCTGCCCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGATCTTGAGCTTGGTCTaGGGGCACGTGAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMILSLV*GHVRYL
Trigger: CAAGTACCTCACGTGCCCCAAGACCAAGCTCAAGAT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp TCATTCCGAGCCCGCTCGATCTTGGCCCGAAATTCCTCTATAGACTaGTGCATGCCTCGGTGGCTGCCCAGCTGGGCCTCCACACTGGGC +
Preference number: 5 (lower is better)
Translates to: SFRARSILARNSSID*CMPRWLPSWASTLG
Trigger: GCCCAGTGTGGAGGCCCAGCTGGGCAGCCACCGAGGCATGCATCAGTCTATAGAGGAATTTCGGGCCAAGATCGAGCGGGCTCGGAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 90 bp GCCTCCAGCTGCAGCCGGATATCCTTGAGCTCCGAGATGCATCGCTaGCAGCGGGACTCCTCCTGCTCACCCTGCTCCAGGCTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: ASSCSRISLSSEMHR*QRDSSCSPCSRLCS
Trigger: ACTACAAAGCCTGGAGCAGGGTGAGCAGGAGGAGTCCCGCTGTCAGCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCAGCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp GCCTCTGCCTCACTCCGCAGCCGATCCAGCATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCCTCCTCTCGCTGCTGCACCACAAAG +
Preference number: 5 (lower is better)
Translates to: ASASLRSRSSMFCSC*SVCCSSSSRCCTTK
Trigger: CTTTGTGGTGCAGCAGCGAGAGGAGGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACATGCTGGATCGGCTGCGGAGTGAGGCAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp TGGCTCAGGATGCCTGCTTCCTGTAGCTGCTGGGCCGGCACCTTCTaGCGTAGTCCCTCAAAGGTGTACTCGGGTTCAGCCTCCACGGAC +
Preference number: 5 (lower is better)
Translates to: WLRMPASCSCWAGTF*RSPSKVYSGSASTD
Trigger: GTCCGTGGAGGCTGAACCCGAGTACACCTTTGAGGGACTACGTCAGAAGGTGCCGGCCCAGCAGCTACAGGAAGCAGGCATCCTGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp TACCGGTACACATCTTCCCGCTGCGTGAGCTCAGCCACCGTGGTGTaGCCCTGTGCCAAACGCTGCAGTTCCTCCTGGCTCAGGATGCCT +
Preference number: 5 (lower is better)
Translates to: YRYTSSRCVSSATVV*PCAKRCSSSWLRMP
Trigger: AGGCATCCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTACCGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp CCGAGGCTGCCTGGGCCTCCAGCAAGATCAGAGCTGTTCCGGGGCTaGGCAGCTGCCGCTGTAGGGCTGTGTAGACACTCAGTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: PRLPGPPARSELFRG*AAAAVGLCRHSVSH
Trigger: ATGAGAAACTGAGTGTCTACACAGCCCTACAGCGGCAGCTGCTCAGCCCCGGAACAGCTCTGATCTTGCTGGAGGCCCAGGCAGCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CTCCTGCAGAGTGCGCTCCAATTGTGCGGTCTTCTCTGCAAAGGATaGCCGCTTGCTCTGCAGCTCCACTTCCGCACTGCGCTGTGCCGT +
Preference number: 5 (lower is better)
Translates to: LLQSALQLCGLLCKG*PLALQLHFRTALCR
Trigger: ACGGCACAGCGCAGTGCGGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CCTCCTCCCGCAGCTGGGCCACTGTTACATGCTCCTCCTGCAGAGTaGGCTCCAATTGTGCGGTCTTCTCTGCAAAGGATGCCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: PPPAAGPLLHAPPAE*APIVRSSLQRMPAC
Trigger: GCAAGCGGGCATCCTTTGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCAGCTGCGGGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCCTCGGCCAGTTCCCGAAAGCGGCCTGCCTCAGCCTCTAGCCTCTaGTTAGACTTTTCGCTGGTAGAGCGAGACTCTTCCTCGGCTCGC +
Preference number: 5 (lower is better)
Translates to: SSASSRKRPASASSL*LDFSLVERDSSSAR
Trigger: GCGAGCCGAGGAAGAGTCTCGCTCTACCAGCGAAAAGTCTAAGCAGAGGCTAGAGGCTGAGGCAGGCCGCTTTCGGGAACTGGCCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGCCAGGCGCCTCAGGCGCTCATTCTCGGCCTCCTTCTCTTTGAGTaGAATCTCTGCCTCCGTCTTGAGCCGTGTGGCCTCACTGATGGC +
Preference number: 5 (lower is better)
Translates to: CQAPQALILGLLLFE*NLCLRLEPCGLTDG
Trigger: GCCATCAGTGAGGCCACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGAGAATGAGCGCCTGAGGCGCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGCTCTGCAAACTTTTTATGCTTCTCCATCTCCGCGTCGGCTGCCTaGTTCTGTTTCAGCGCTGCCTGCTCTGCCTGGGCCCGACGCGCC +
Preference number: 5 (lower is better)
Translates to: CSANFLCFSISASAA*FCFSAACSAWARRA
Trigger: GGCGCGTCGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGGCTGCGCTGCCGGGCTGCCTCTGTTACCTCGGCCTTTAGTCGCTaGAGCTCCTCATCCAGGATGCTCTTCTGGTGGTCAGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: WLRCRAASVTSAFSR*SSSSRMLFWWSVSS
Trigger: AGAGGAGACTGACCACCAGAAGAGCATCCTGGATGAGGAGCTGCAGCGACTAAAGGCCGAGGTAACAGAGGCAGCCCGGCAGCGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CGCTCGGCATCGTGGTCACTCTGCTGTCGCTGGATCTCCAGCGTCTaGACCAACGTCACCTTCTCCTGTGTCGCAAGTTCAGTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: RSASWSLCCRWISSV*TNVTFSCVASSVRC
Trigger: GCACCGCACTGAACTTGCGACACAGGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGACCACGATGCCGAGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCCTCACGCAGCTGCTTTGCTTTAGCCACCTCGTCCTGGAAGAGCTaGTCCAGCTTGGCCTTCTCCTGCTCGATGAAGCGCTCGCGCTGC +
Preference number: 5 (lower is better)
Translates to: SSRSCFALATSSWKS*SSLAFSCSMKRSRC
Trigger: GCAGCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGGTGTGACCCTGTGCCAAACGCTGCAGTTCCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCTGGGCCGGCACCTTCTGACGTAGTC +
Preference number: 5 (lower is better)
Translates to: WCDPVPNAAVPPGSG*LLPVAAGPAPSDVV
Trigger: GACTACGTCAGAAGGTGCCGGCCCAGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGGTCACACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGGCCTCATAGATGGTTACTTTCTCCTTCGAGTCCTCCAGATAGATaGCGGCCAGGCAGCCGCTGCCCTGCAGCAGAGTCCGCACGGAGC +
Preference number: 5 (lower is better)
Translates to: WPHRWLLSPSSPPDR*RPGSRCPAAESARS
Trigger: GCTCCGTGCGGACTCTGCTGCAGGGCAGCGGCTGCCTGGCCGGCATCTATCTGGAGGACTCGAAGGAGAAAGTAACCATCTATGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp GGGCACCCACTCCTGCCTTCAGCCGGAGGTTGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCAGACGATACACCCTCCGGTACATCT +
Preference number: 5 (lower is better)
Translates to: GHPLLPSAGGCTQCG*LPGAHADDTPSGTS
Trigger: AGATGTACCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 90 bp GGTTCTCCTCTACCCAGGCCAGCAGGTCTTGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGCGCCTCTGTGTACTCTGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: GSPLPRPAGLAGSAV*SPLALGASVYSAGS
Trigger: TGACCCTGCAGAGTACACAGAGGCGCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGGGTAGAGGAGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 90 bp ATGGCCTCCCTCAGACGCTCGGCATCGTGGTCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACCAACGTCACCTTCTCCTGTGTCGCA +
Preference number: 5 (lower is better)
Translates to: MASLRRSASWSLCCR*ISSVCTNVTFSCVA
Trigger: TGCGACACAGGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCTGAGGGAGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGGTCAGCTTGGGGTaGCCGTCAGCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRVSLG*PSAMSS
Trigger: TGATGACATTGCTGACGGCAACCCCAAGCTGACCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGGGTCAGCTTGGGGTaGCCGTCAGCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRVSLG*PSAMSS
Trigger: TGATGACATTGCTGACGGCAACCCCAAGCTGACCCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGGCCGAGGGTCAGCTaGGGGTTGCCGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRPRVS*GLPSAM
Trigger: CATTGCTGACGGCAACCCCAAGCTGACCCTCGGCCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCAGCAGCTTCTCCTTaGCTGTCATGTCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQAAASP*LSCPPT
Trigger: AGTCGGAGGACATGACAGCAAAGGAGAAGCTGCTGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGCAGCAGCTTCTCCTTaGCTGTCATGTCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWAAASP*LSCPPT
Trigger: AGTCGGAGGACATGACAGCAAAGGAGAAGCTGCTGC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGGTGGATGATAGCATaGAAGAGACGGCCATCGCGC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARWMIA*KRRPSR
Trigger: GCGCGATGGCCGTCTCTTCAATGCTATCATCCACCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTGGTGCCGGATCCATaGCAGCAGCAGCAACACAAG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVVPDP*QQQQHK
Trigger: CTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAKLEGN*RSSKAA
Trigger: CGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTTTTTGTCTGCCTCCTaGGCAGGAAGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMFLSAS*AGSSVS
Trigger: GGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTTTTTGTCTGCCTCCTaGGCAGGAAGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDFLSAS*AGSSVS
Trigger: GGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATGGCCACATGCAGCTaGCCCCACTCCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAMATCS*PHSFST
Trigger: TGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAAACTCGCTTCGCAGTaGCTTCTCCCGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWKLASQ*LLPLQD
Trigger: ATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTTT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATCATACCATCAGCCTaGTCCAGGTCTCTCTCGACT +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDIIPSA*SRSLST
Trigger: AGTCGAGAGAGACCTGGACAAGGCTGATGGTATGAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCT +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAFSRR*YSVRMA
Trigger: AGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCT +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAFSRR*YSVRMA
Trigger: AGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGAGCCCGCTCGATCTaGGCCCGAAATTCCTCTATA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRARSI*ARNSSI
Trigger: TATAGAGGAATTTCGGGCCAAGATCGAGCGGGCTCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGAGCCCGCTCGATCTaGGCCCGAAATTCCTCTATA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRARSI*ARNSSI
Trigger: TATAGAGGAATTTCGGGCCAAGATCGAGCGGGCTCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAACTGCACAATAGCCTaGGCCCGCTTGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSNCTIA*ARLARP
Trigger: AGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAACTGCACAATAGCCTaGGCCCGCTTGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKNCTIA*ARLARP
Trigger: AGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAACTGCACAATAGCCTaGGCCCGCTTGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVNCTIA*ARLARP
Trigger: AGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGGCATTGGTCACCCTaGTGCACAGTCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAWHWSP*CTVTST
Trigger: GGTGGAGGTGACTGTGCACAAGGGTGACCAATGCCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRQVAQS*SLLLGL
Trigger: AAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATGCAGCCGGATATCCTaGAGCTCCGAGATGCATCGC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGACSRIS*SSEMHR
Trigger: GCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGGACCTGTTCCAGCTaGCCCAGGGTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRTCSS*PRVSSN
Trigger: GTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGGACCTGTTCCAGCTaGCCCAGGGTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRTCSS*PRVSSN
Trigger: GTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGGACCTGTTCCAGCTaGCCCAGGGTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRTCSS*PRVSSN
Trigger: GTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGTGGCTTCAAGCTCTaGGAGAGTGGCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGGFKL*ESGRHS
Trigger: GCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCAAAGGATGCCCGCTaGCTCTGCAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAKDAR*LCSSTS
Trigger: GGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCAAAGGATGCCCGCTaGCTCTGCAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKAKDAR*LCSSTS
Trigger: GGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCAAAGGATGCCCGCTaGCTCTGCAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAKDAR*LCSSTS
Trigger: GGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCAGGCGGATCAGCTCTaGCTCCGCAGCCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVQADQL*LRSQAL
Trigger: CAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSASFS*SAISAS
Trigger: GGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCCTCGATGTCAGCCTaGTGCAGTGCCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSMSA*CSAACS
Trigger: GGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSLSDA*RSWARR
Trigger: GCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATTGTGTCCTCCGCGTaGCTGCGAATGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRIVSSA*LRMRPS
Trigger: GCTGGGGCGCATTCGCAGCAACGCGGAGGACACAAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSTLA*SRSTSS
Trigger: GGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTTCAATGCGAGCCTaGAGCTTGCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSASMRA*SLPSSS
Trigger: GGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTTCAATGCGAGCCTaGAGCTTGCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKASMRA*SLPSSS
Trigger: GGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARCVLS*SRRMRA
Trigger: GGCCCTCATCCTTCGTGACAAGGACAACACACAGCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCAACTGCTGAGCCATTaGCTCCTTGTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQQLLSH*LLVLLQ
Trigger: CTGCAGGAGGACAAGGAGCAAATGGCTCAGCAGTTG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCAACTGCTGAGCCATTaGCTCCTTGTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWQLLSH*LLVLLQ
Trigger: CTGCAGGAGGACAAGGAGCAAATGGCTCAGCAGTTG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAAGAGCTGCTCCAGCTaGGCCTTCTCCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAKSCSS*AFSCSM
Trigger: CATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCAGTTCCTCTTGCTaGCGCCTCACGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCSSSC*RLTPSS
Trigger: TGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTGCAGTTCCTCTTGCTaGCGCCTCACGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKCSSSC*RLTPSS
Trigger: TGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGCA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCAGTTCCTCTTGCTaGCGCCTCACGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCSSSC*RLTPSS
Trigger: TGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCAGCTGACAGCAGTTaGTGGTGCAGCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASADSS*WCSSGP
Trigger: GGGTCCTGAGCTGCACCACAAACTGCTGTCAGCTGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGACCGGCACCGCTGTaGGAGCTGGCTGTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRPAPL*ELAVGD
Trigger: GTCACCTACAGCCAGCTCCAACAGCGGTGCCGGTCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGCTCTGCTGAGGATCTaGGCGTCCAGGAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKALLRI*ASRSSL
Trigger: CAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGGACATACAGACGTaGGTTCCGCACAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMDIQT*VPHRVH
Trigger: GTGGACCCTGTGCGGAACCAACGTCTGTATGTCCAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTTGGTGTCATCACTaGGATCTGCCAGCACACGGT +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPWCHH*DLPAHG
Trigger: ACCGTGTGCTGGCAGATCCAAGTGATGACACCAAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTTGGTGTCATCACTaGGATCTGCCAGCACACGGT +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPWCHH*DLPAHG
Trigger: ACCGTGTGCTGGCAGATCCAAGTGATGACACCAAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTCTTCTCTGCCCCTTaGAGTGGCAGGAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVFSAP*SGRRRR
Trigger: CCTGCGCCTCCTGCCACTCAAAGGGGCAGAGAAGAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCTCCGGGATCATGTTaGACTGCATCACCTCCCACA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQPPGSC*TASPPT
Trigger: TGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCCTCCGGGATCATGTTaGACTGCATCACCTCCCACA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWPPGSC*TASPPT
Trigger: TGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGCCTCGTCCATGACTaGAGAGCGTACCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGLVHD*RAYQLL
Trigger: GAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGCCTCGTCCATGACTaGAGAGCGTACCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGLVHD*RAYQLL
Trigger: GAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCTTCCACCGTCAGCTaGAGTCCCTTGATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSSTVS*SPLMGS
Trigger: TGACCCCATCAAGGGACTCAAGCTGACGGTGGAAGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTTCCACCGTCAGCTaGAGTCCCTTGATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSTVS*SPLMGS
Trigger: TGACCCCATCAAGGGACTCAAGCTGACGGTGGAAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCAGCTGACAGCAGCTaGTCCTTGAACTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSADSS*SLNSGP
Trigger: GGGCCCCGAGTTCAAGGACAAGCTGCTGTCAGCTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCAGCTGACAGCAGCTaGTCCTTGAACTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSADSS*SLNSGP
Trigger: GGGCCCCGAGTTCAAGGACAAGCTGCTGTCAGCTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCAGCTGACAGCAGCTaGTCCTTGAACTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSADSS*SLNSGP
Trigger: GGGCCCCGAGTTCAAGGACAAGCTGCTGTCAGCTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTGCGCACTGAGGACTaGGAGGATGTCTTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWLRTED*EDVFRS
Trigger: GGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTGCGCACTGAGGACTaGGAGGATGTCTTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLRTED*EDVFRS
Trigger: GGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRITTRR*RTEDLE
Trigger: CTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTACACAGACATCTCCTaGCCCGTCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQYTDIS*PVSGST
Trigger: TGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGTA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCGATGATCATAGACTaGACGACGCCATCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSMIID*TTPSEE
Trigger: CTCCTCAGATGGCGTCGTCAAGTCTATGATCATCGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGGAAGCCACCGGCATaGCCTGAGAGCATGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRKPPA*PESMSA
Trigger: TGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATGTTGTCTACCAGGTaGCGGTGCATGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAMLSTR*RCMASV
Trigger: CACGGAGGCCATGCACCGCAACCTGGTAGACAACAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCCCCGGTGCAGGCTaGGGCCTCCAGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAPGAG*GLQQPL
Trigger: CAGCGGCTGCTGGAGGCCCAAGCCTGCACCGGGGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCACCAGGCCCTTGTaGACAGCTTCAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSTRPL*TASVTG
Trigger: CCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCACCAGGCCCTTGTaGACAGCTTCAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSTRPL*TASVTG
Trigger: CCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQLSTRP*LTASVT
Trigger: GGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGCGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRSTMI*STRPLL
Trigger: CAACAAGGGCCTGGTGGACAAGATCATGGTAGACCG...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRSTMI*STRPLL
Trigger: CAACAAGGGCCTGGTGGACAAGATCATGGTAGACCG...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGCTGACATCTTGGTCTaGGTGCGTGGGTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQADILV*VRGSSN
Trigger: GTTTGAGGACCCACGCACCAAGACCAAGATGTCAGC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGGGCAGCTGACATCTaGGTCTTGGTGCGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSWAADI*VLVRGS
Trigger: GGACCCACGCACCAAGACCAAGATGTCAGCTGCCCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGGCAGCTGACATCTaGGTCTTGGTGCGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWAADI*VLVRGS
Trigger: GGACCCACGCACCAAGACCAAGATGTCAGCTGCCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGTCGCCGGTCCTTCTaGGCAACCATCACCCCCTCA +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGRRSF*ATITPS
Trigger: TGAGGGGGTGATGGTTGCCAAGAAGGACCGGCGACC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS TCA 90 bp CGCACATCTGTCTGGGCTAGAACAGCCTGCCAGCGCTCCAGCAACTaGGTGACACGTTCTCGCCAGCGCTCAACTTCTACGTCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: RTSVWARTACQRSSN*VTRSRQRSTSTSRS
Trigger: TGAGCGGGACGTAGAAGTTGAGCGCTGGCGAGAACGTGTCACTCAGTTGCTGGAGCGCTGGCAGGCTGTTCTAGCCCAGACAGATGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp CTTGCCCGTCTCTGGGTCCACAATCACCACGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTTCCGTTCCCGCTTCTTCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LARLWVHNHHAALAH*GLGGCLPFPLLLLQ
Trigger: CTGAAGGAGAAGAAGCGGGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGATTGTGGACCCAGAGACGGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp GCCTGCCTCATAGTACAGCCAGCCCTTCTTCAGGGCCTGGGCAGCTaGCATCTTGGTCTTGGTGCGTGGGTCCTCAAACCCACAGAAGGC +
Preference number: 5 (lower is better)
Translates to: ACLIVQPALLQGLGS*HLGLGAWVLKPTEG
Trigger: GCCTTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAGATGTCAGCTGCCCAGGCCCTGAAGAAGGGCTGGCTGTACTATGAGGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGCCGGATCCATTGCAGCAGCAGCAACACAAGCTCCCGGTACTCCTaGCAACGAAGCTGCAGCTCATTGGCCCTCACTCCGTCCTGTGCA +
Preference number: 5 (lower is better)
Translates to: CRIHCSSSNTSSRYS*QRSCSSLALTPSCA
Trigger: TGCACAGGACGGAGTGAGGGCCAATGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCTTGTGTTGCTGCTGCTGCAATGGATCCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp GGGAACTTGCGCTCCTCAAAAGCAGCGGTGTGGTGCCGGATCCATTaGAGCAGCAGCAACACAAGCTCCCGGTACTCCTGCCAACGAAGC +
Preference number: 5 (lower is better)
Translates to: GNLRSSKAAVWCRIH*SSSNTSSRYSCQRS
Trigger: GCTTCGTTGGCAGGAGTACCGGGAGCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCACACCGCTGCTTTTGAGGAGCGCAAGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp CATCCTGGCTGTCTCGAAGGAAGGCCTGGTAGTGCAATTCCAGGTTaGGCAGAGCTTGTCGCTGCTCCTCGGGCTTCAGTGTGCGGAACG +
Preference number: 5 (lower is better)
Translates to: HPGCLEGRPGSAIPG*AELVAAPRASVCGT
Trigger: CGTTCCGCACACTGAAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTGGAATTGCACTACCAGGCCTTCCTTCGAGACAGCCAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCAAGCTCTTGGAGAGTGGCAGGCACAGCCTGGGCCTCCTTCAGCTaGTCCTCATGGGTTTTAAGCACCTCCTCAGCCCCCTGGGTACTG +
Preference number: 5 (lower is better)
Translates to: SSSWRVAGTAWASFS*SSWVLSTSSAPWVL
Trigger: CAGTACCCAGGGGGCTGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp GTCTGCACCAACGTCACCTTCTCCTGTGTCGCAAGTTCAGTGCGGTaGAGCTTCTCGCCGATCTCTTCAGCCTGCTTCCGGAAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: VCTNVTFSCVASSVR*SFSPISSACFRKRW
Trigger: CCAGCGCTTCCGGAAGCAGGCTGAAGAGATCGGCGAGAAGCTGCACCGCACTGAACTTGCGACACAGGAGAAGGTGACGTTGGTGCAGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CCAGCGTCTGCACCAACGTCACCTTCTCCTGTGTCGCAAGTTCAGTaGGGTGCAGCTTCTCGCCGATCTCTTCAGCCTGCTTCCGGAAGC +
Preference number: 5 (lower is better)
Translates to: PASAPTSPSPVSQVQ*GAASRRSLQPASGS
Trigger: GCTTCCGGAAGCAGGCTGAAGAGATCGGCGAGAAGCTGCACCGCACTGAACTTGCGACACAGGAGAAGGTGACGTTGGTGCAGACGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TTCCATCTGCTGCTGCTGCCGCTGCTGCTCCTCACGCAGCTGCTTTaGTTTAGCCACCTCGTCCTGGAAGAGCTGCTCCAGCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: FHLLLLPLLLLTQLL*FSHLVLEELLQLGL
Trigger: AAGGCCAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGATGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCCTGTTCCATCTGCTGCTGCTGCCGCTGCTGCTCCTCACGCAGCTaGTTTGCTTTAGCCACCTCGTCCTGGAAGAGCTGCTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SCSICCCCRCCSSRS*FALATSSWKSCSSL
Trigger: CAAGCTGGAGCAGCTCTTCCAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGATGGAACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp GATCTCCCAGATGGTCACGGTCCTGCCCTGGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTCGAAGACGTCACGGGCCTCCGTATC +
Preference number: 5 (lower is better)
Translates to: DLPDGHGPALELAKR*RHGGLFEDVTGLRI
Trigger: GATACGGAGGCCCGTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGACCATCTGGGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp AGGAAGCTCTTCTGCAGGGCCTGGGTCTCCTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCCTCCTCTTCCATGCGGCGAAGGGTC +
Preference number: 5 (lower is better)
Translates to: RKLFCRAWVSCSICS*CTVCISSSSMRRRV
Trigger: GACCCTTCGCCGCATGGAAGAGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165210.8
CDS CCA 90 bp CCTGTTCCAGCTTGCCCAGGGTCAGTTCCAACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCTCTGGCAAGGCTAGAACTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: PVPACPGSVPTPSAE*VQQVTALARLELSQ
Trigger: CTGAGAAAGTTCTAGCCTTGCCAGAGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGTTGGAACTGACCCTGGGCAAGCTGGAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp TGGTCACGGTCCTGCCCTGGAACTTGCCAAACGGTGCAGACACGGTaGCCTTTTCGAAGACGTCACGGGCCTCCGTATCGGTGTACACCA +
Preference number: 5 (lower is better)
Translates to: WSRSCPGTCQTVQTR*PFRRRHGPPYRCTP
Trigger: TGGTGTACACCGATACGGAGGCCCGTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp GATCCTCCGGGATCATGTTTGACTGCATCACCTCCCACAGAGACATaGAGGAGCCACCGTGGCTGCCACCACCCGGGATGTCAATCTGCG +
Preference number: 5 (lower is better)
Translates to: DPPGSCLTASPPTET*RSHRGCHHPGCQSA
Trigger: CGCAGATTGACATCCCGGGTGGTGGCAGCCACGGTGGCTCCTCCATGTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp TCTCTGGGTCCACAATCACCACGCGGCGCTTGCGCACTGAGGACTTaGAGGATGTCTTCCGTTCCCGCTTCTTCTCCTTCAGGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: SLGPQSPRGACALRT*RMSSVPASSPSGAG
Trigger: TCCTGCCCCTGAAGGAGAAGAAGCGGGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGATTGTGGACCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGCAGGGAGATGAGGTaGTGGCCATCACGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSREMR*WPSRRS
Trigger: AGACCTCCGTGATGGCCACAACCTCATCTCCCTGCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGGGTCAGCTTGGGGTaGCCGTCAGCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARVSLG*PSAMSS
Trigger: TGATGACATTGCTGACGGCAACCCCAAGCTGACCCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCAGCAGCTTCTCCTTaGCTGTCATGTCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAAASP*LSCPPT
Trigger: AGTCGGAGGACATGACAGCAAAGGAGAAGCTGCTGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGGTGGATGATAGCATaGAAGAGACGGCCATCGCGC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRWMIA*KRRPSR
Trigger: GCGCGATGGCCGTCTCTTCAATGCTATCATCCACCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGGTGGATGATAGCATaGAAGAGACGGCCATCGCGC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRWMIA*KRRPSR
Trigger: GCGCGATGGCCGTCTCTTCAATGCTATCATCCACCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTGGTGCCGGATCCATaGCAGCAGCAGCAACACAAG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVVPDP*QQQQHK
Trigger: CTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVKLEGN*RSSKAA
Trigger: CGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKKLEGN*RSSKAA
Trigger: CGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSKLEGN*RSSKAA
Trigger: CGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGACTTTGGACCGGTTTTaGTCTGCCTCCTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWTLDRF*SASLAG
Trigger: TCCTGCCAAGGAGGCAGACAAAAACCGGTCCAAAGT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATGGCCACATGCAGCTaGCCCCACTCCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVMATCS*PHSFST
Trigger: TGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATGGCCACATGCAGCTaGCCCCACTCCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSMATCS*PHSFST
Trigger: TGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAAACTCGCTTCGCAGTaGCTTCTCCCGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAKLASQ*LLPLQD
Trigger: ATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTTT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGAGGGTCTGCACATCATaGAACAACAGCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMRVCTS*NNSRII
Trigger: TATGATCCGGCTGTTGTTCAATGATGTGCAGACCCT...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGAGCCCGCTCGATCTaGGCCCGAAATTCCTCTATA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARARSI*ARNSSI
Trigger: TATAGAGGAATTTCGGGCCAAGATCGAGCGGGCTCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGAGTTCAGCAGCTTaGCATACTGCAGGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRSSAA*HTAGLG
Trigger: GCCTAGACCTGCAGTATGCAAAGCTGCTGAACTCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGGAGTTCAGCAGCTTaGCATACTGCAGGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRSSAA*HTAGLG
Trigger: GCCTAGACCTGCAGTATGCAAAGCTGCTGAACTCCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAACTGCACAATAGCCTaGGCCCGCTTGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRNCTIA*ARLARP
Trigger: AGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGGCATTGGTCACCCTaGTGCACAGTCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVWHWSP*CTVTST
Trigger: GGTGGAGGTGACTGTGCACAAGGGTGACCAATGCCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACCCACCAGCTGGCATaGGTCACCCTTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTHQLA*VTLVHS
Trigger: ACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACCCACCAGCTGGCATaGGTCACCCTTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTHQLA*VTLVHS
Trigger: ACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACCCACCAGCTGGCATaGGTCACCCTTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTHQLA*VTLVHS
Trigger: ACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCTGGGCCTCCTGGTaGGGCGGCGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSWASW*GGGTRK
Trigger: CTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTGCAGCCGGATATCCTaGAGCTCCGAGATGCATCGC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVCSRIS*SSEMHR
Trigger: GCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTGCAGCCGGATATCCTaGAGCTCCGAGATGCATCGC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSCSRIS*SSEMHR
Trigger: GCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGGACCTGTTCCAGCTaGCCCAGGGTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRTCSS*PRVSSN
Trigger: GTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGTGGCTTCAAGCTCTaGGAGAGTGGCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGGFKL*ESGRHS
Trigger: GCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCTCTTGCCGCCTCTaGGCATCCTGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCSCRL*ASCSQA
Trigger: CGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGTCTCACTGATGAACTaGATATACTGGCTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMVSLMN*IYWLVS
Trigger: GCTCACGAGCCAGTATATCAAGTTCATCAGTGAGAC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASACR*RWLSSC
Trigger: GCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCAAAGGATGCCCGCTaGCTCTGCAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAKDAR*LCSSTS
Trigger: GGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCGCTCAGCCTCAGCTaGCTGCTGTGCCCGTCGCTC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSLSLS*LLCPSL
Trigger: GAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSTLA*SRSTSS
Trigger: GGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSTLA*SRSTSS
Trigger: GGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCTGCTCCGCTTCCTaGCGCAGCTTCTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSCSAS*RSFSAA
Trigger: GGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTTCAATGCGAGCCTaGAGCTTGCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRASMRA*SLPSSS
Trigger: GGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRCVLS*SRRMRA
Trigger: GGCCCTCATCCTTCGTGACAAGGACAACACACAGCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRCVLS*SRRMRA
Trigger: GGCCCTCATCCTTCGTGACAAGGACAACACACAGCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRKRCV*SLSRRM
Trigger: CATCCTTCGTGACAAGGACAACACACAGCGCTTCCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRKRCV*SLSRRM
Trigger: CATCCTTCGTGACAAGGACAACACACAGCGCTTCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACAACTGCTGAGCCATTaGCTCCTTGTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAQLLSH*LLVLLQ
Trigger: CTGCAGGAGGACAAGGAGCAAATGGCTCAGCAGTTG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAAGAGCTGCTCCAGCTaGGCCTTCTCCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKKSCSS*AFSCSM
Trigger: CATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAAGAGCTGCTCCAGCTaGGCCTTCTCCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSKSCSS*AFSCSM
Trigger: CATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAAGAGCTGCTCCAGCTaGGCCTTCTCCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVKSCSS*AFSCSM
Trigger: CATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCCTTCACAGCCTCATaGACTGTCAGCCGCCGATTC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASFTAS*TVSRRF
Trigger: GAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCAGCTGACAGCAGTTaGTGGTGCAGCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSADSS*WCSSGP
Trigger: GGGTCCTGAGCTGCACCACAAACTGCTGTCAGCTGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCAGCTGACAGCAGTTaGTGGTGCAGCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSADSS*WCSSGP
Trigger: GGGTCCTGAGCTGCACCACAAACTGCTGTCAGCTGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCAGCTGACAGCAGTTaGTGGTGCAGCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSADSS*WCSSGP
Trigger: GGGTCCTGAGCTGCACCACAAACTGCTGTCAGCTGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGCACACGGTGGCTTTaGCTGGGGTCTACAATGCCA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGTRWL*LGSTMP
Trigger: TGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGGCACACGGTGGCTTTaGCTGGGGTCTACAATGCCA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKGTRWL*LGSTMP
Trigger: TGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGCACACGGTGGCTTTaGCTGGGGTCTACAATGCCA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGTRWL*LGSTMP
Trigger: TGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACAGGAACCTCAACCTaGGCCTGCTCCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTGTST*ACSSVS
Trigger: GGAGACACTGGAGCAGGCCAAGGTTGAGGTTCCTGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACAGGAACCTCAACCTaGGCCTGCTCCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTGTST*ACSSVS
Trigger: GGAGACACTGGAGCAGGCCAAGGTTGAGGTTCCTGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACAGGAACCTCAACCTaGGCCTGCTCCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTGTST*ACSSVS
Trigger: GGAGACACTGGAGCAGGCCAAGGTTGAGGTTCCTGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATATGGTGATGACAATCTaGATGACCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDMVMTI*MTFSTV
Trigger: CACCGTGGAGAAGGTCATCAAGATTGTCATCACCAT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTCTGCTGAGGATCTaGGCGTCCAGGAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRALLRI*ASRSSL
Trigger: CAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATGGACATACAGACGTaGGTTCCGCACAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAMDIQT*VPHRVH
Trigger: GTGGACCCTGTGCGGAACCAACGTCTGTATGTCCAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTTGGTGTCATCACTaGGATCTGCCAGCACACGGT +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPWCHH*DLPAHG
Trigger: ACCGTGTGCTGGCAGATCCAAGTGATGACACCAAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACCTCCGGGATCATGTTaGACTGCATCACCTCCCACA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAPPGSC*TASPPT
Trigger: TGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKIEVAA*VSHLQR
Trigger: CCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSIEVAA*VSHLQR
Trigger: CCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVIEVAA*VSHLQR
Trigger: CCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACT +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTESRS*VASTKT
Trigger: AGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTTCCACCGTCAGCTaGAGTCCCTTGATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSTVS*SPLMGS
Trigger: TGACCCCATCAAGGGACTCAAGCTGACGGTGGAAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTGCGCACTGAGGACTaGGAGGATGTCTTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGALRTED*EDVFRS
Trigger: GGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGGAAGCCACCGGCATaGCCTGAGAGCATGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRKPPA*PESMSA
Trigger: TGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATGTTGTCTACCAGGTaGCGGTGCATGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKMLSTR*RCMASV
Trigger: CACGGAGGCCATGCACCGCAACCTGGTAGACAACAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATGTTGTCTACCAGGTaGCGGTGCATGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVMLSTR*RCMASV
Trigger: CACGGAGGCCATGCACCGCAACCTGGTAGACAACAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATGTTGTCTACCAGGTaGCGGTGCATGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSMLSTR*RCMASV
Trigger: CACGGAGGCCATGCACCGCAACCTGGTAGACAACAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGALSTRP*LTASVT
Trigger: GGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCACGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARSTMI*STRPLL
Trigger: CAACAAGGGCCTGGTGGACAAGATCATGGTAGACCG...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCTGACATCTTGGTCTaGGTGCGTGGGTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAADILV*VRGSSN
Trigger: GTTTGAGGACCCACGCACCAAGACCAAGATGTCAGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGGCAGCTGACATCTaGGTCTTGGTGCGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWAADI*VLVRGS
Trigger: GGACCCACGCACCAAGACCAAGATGTCAGCTGCCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATCTTGAGCTTGGTCTaGGGGCACGTGAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQILSLV*GHVRYL
Trigger: CAAGTACCTCACGTGCCCCAAGACCAAGCTCAAGAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp CATCTGTCTGGGCTAGAACAGCCTGCCAGCGCTCCAGCAACTGAGTaGCACGTTCTCGCCAGCGCTCAACTTCTACGTCCCGCTCACCAT +
Preference number: 5 (lower is better)
Translates to: HLSGLEQPASAPATE*HVLASAQLLRPAHH
Trigger: ATGGTGAGCGGGACGTAGAAGTTGAGCGCTGGCGAGAACGTGTCACTCAGTTGCTGGAGCGCTGGCAGGCTGTTCTAGCCCAGACAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp AAAGTCAGCCATGAGCCGGGCACGCTGATCCTCCGGGATCATGTTTaGCTGCATCACCTCCCACAGAGACATGGAGGAGCCACCGTGGCT +
Preference number: 5 (lower is better)
Translates to: KVSHEPGTLILRDHV*LHHLPQRHGGATVA
Trigger: AGCCACGGTGGCTCCTCCATGTCTCTGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGGATCAGCGTGCCCGGCTCATGGCTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp GTCAGGCCTTCTTGTAGCTGTAGCGCTGTGGCCTCGTCCATGACTTaGGAGCGTACCAGCTCCTCCACAGTGATCTGCTTGCGGAGACCG +
Preference number: 5 (lower is better)
Translates to: VRPSCSCSAVASSMT*ERTSSSTVICLRRP
Trigger: CGGTCTCCGCAAGCAGATCACTGTGGAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAGCGCTACAGCTACAAGAAGGCCTGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCAAAGCTGGAGGGGAACTTGCGCTCCTCAAAAGCAGCGGTGTGGTaGCGGATCCATTGCAGCAGCAGCAACACAAGCTCCCGGTACTCC +
Preference number: 5 (lower is better)
Translates to: SKLEGNLRSSKAAVW*RIHCSSSNTSSRYS
Trigger: GGAGTACCGGGAGCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCACACCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp TACATGCTCCTCCTGCAGAGTGCGCTCCAATTGTGCGGTCTTCTCTaGAAAGGATGCCCGCTTGCTCTGCAGCTCCACTTCCGCACTGCG +
Preference number: 5 (lower is better)
Translates to: YMLLLQSALQLCGLL*KGCPLALQLHFRTA
Trigger: CGCAGTGCGGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAGGAGCATGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CTGGGCCACTGTTACATGCTCCTCCTGCAGAGTGCGCTCCAATTGTaGGGTCTTCTCTGCAAAGGATGCCCGCTTGCTCTGCAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LGHCYMLLLQSALQL*GLLCKGCPLALQLH
Trigger: GTGGAGCTGCAGAGCAAGCGGGCATCCTTTGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGTCTGCTCTGCAAACTTTTTATGCTTCTCCATCTCCGCGTCGGCTaGCTGCTTCTGTTTCAGCGCTGCCTGCTCTGCCTGGGCCCGACG +
Preference number: 5 (lower is better)
Translates to: CLLCKLFMLLHLRVG*LLLFQRCLLCLGPT
Trigger: CGTCGGGCCCAGGCAGAGCAGGCAGCGCTGAAACAGAAGCAGGCAGCCGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGAGCAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp AGCTCCTCATCCAGGATGCTCTTCTGGTGGTCAGTCTCCTCTAGCTaGAGCCTCAGTGTGGTCAGCTCCTGCTCTACCTGGGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSSSRMLFWWSVSSS*SLSVVSSCSTWAFC
Trigger: GCAGAAGGCCCAGGTAGAGCAGGAGCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGACCACCAGAAGAGCATCCTGGATGAGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TGCAGGGCCTGGGTCTCCTGCAGTATCTGCTCCTGCTGCACAGTCTaGATCTCCTCCGACTTGAGCTGCAGTAACTTCGCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: CRAWVSCSICSCCTV*ISSDLSCSNFASCL
Trigger: CAAGCAGGAGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp ACATCTCCTTGCCCGTCTCTGGGTCCACAATCACCACGCGGCGCTTaGGCACTGAGGACTTGGAGGATGTCTTCCGTTCCCGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TSPCPSLGPQSPRGA*ALRTWRMSSVPASS
Trigger: AGAAGAAGCGGGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGATTGTGGACCCAGAGACGGGCAAGGAGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCAGAGAGGAAGCTCTTCTGCAGGGCCTGGGTCTCCTGCAGTATCTaGTCCTGCTGCACAGTCTGCATCTCCTCCTCTTCCATGCGGCGA +
Preference number: 5 (lower is better)
Translates to: SERKLFCRAWVSCSI*SCCTVCISSSSMRR
Trigger: TCGCCGCATGGAAGAGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165210.8
CDS CCA 90 bp GAGGCCTTGGTGGCTTCAAGCTCTTGGAGAGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCCTCATGGGTTTTAAGCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: EALVASSSWRVAGTA*ASFSCSSWVLSTSS
Trigger: TGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACCAAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp TCGGCCTTTAGTCGCTGCAGCTCCTCATCCAGGATGCTCTTCTGGTaGTCAGTCTCCTCTAGCTGCAGCCTCAGTGTGGTCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SAFSRCSSSSRMLFW*SVSSSCSLSVVSSC
Trigger: GCAGGAGCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGACCACCAGAAGAGCATCCTGGATGAGGAGCTGCAGCGACTAAAGGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp ACCTCGGCCTTTAGTCGCTGCAGCTCCTCATCCAGGATGCTCTTCTaGTGGTCAGTCTCCTCTAGCTGCAGCCTCAGTGTGGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TSAFSRCSSSSRMLF*WSVSSSCSLSVVSS
Trigger: GGAGCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGACCACCAGAAGAGCATCCTGGATGAGGAGCTGCAGCGACTAAAGGCCGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp TGCAGCAGGCTGTCCTTCTCAGAGAGGAAGCTCTTCTGCAGGGCCTaGGTCTCCTGCAGTATCTGCTCCTGCTGCACAGTCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: CSRLSFSERKLFCRA*VSCSICSCCTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTCTGAGAAGGACAGCCTGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGCAGGGAGATGAGGTaGTGGCCATCACGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSREMR*WPSRRS
Trigger: AGACCTCCGTGATGGCCACAACCTCATCTCCCTGCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGGGTCAGCTTGGGGTaGCCGTCAGCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRVSLG*PSAMSS
Trigger: TGATGACATTGCTGACGGCAACCCCAAGCTGACCCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGGGTCAGCTTGGGGTaGCCGTCAGCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRVSLG*PSAMSS
Trigger: TGATGACATTGCTGACGGCAACCCCAAGCTGACCCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCAGCAGCTTCTCCTTaGCTGTCATGTCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAAASP*LSCPPT
Trigger: AGTCGGAGGACATGACAGCAAAGGAGAAGCTGCTGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATTCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTA +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDSRFSR*VCRYTL
Trigger: TAAAGTGTATCGACAGACCAACCTGGAGAACCTAGA...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGTCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTA +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMSRFSR*VCRYTL
Trigger: TAAAGTGTATCGACAGACCAACCTGGAGAACCTAGA...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTGGTGCCGGATCCATaGCAGCAGCAGCAACACAAG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVVPDP*QQQQHK
Trigger: CTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRKLEGN*RSSKAA
Trigger: CGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp ACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: TPVPPQGARPHAEREGRMGSSVS*NFKNWH
Trigger: GTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCC...CATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDGSSVS*NFKNWH
Trigger: GTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCC...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTTTTTGTCTGCCTCCTaGGCAGGAAGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQFLSAS*AGSSVS
Trigger: GGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTTTTTGTCTGCCTCCTaGGCAGGAAGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWFLSAS*AGSSVS
Trigger: GGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACTTTGGACCGGTTTTaGTCTGCCTCCTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGATLDRF*SASLAG
Trigger: TCCTGCCAAGGAGGCAGACAAAAACCGGTCCAAAGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAAACTCGCTTCGCAGTaGCTTCTCCCGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSKLASQ*LLPLQD
Trigger: ATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTTT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAAACTCGCTTCGCAGTaGCTTCTCCCGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVKLASQ*LLPLQD
Trigger: ATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTTT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAAACTCGCTTCGCAGTaGCTTCTCCCGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKKLASQ*LLPLQD
Trigger: ATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTTT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATCATACCATCAGCCTaGTCCAGGTCTCTCTCGACT +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWIIPSA*SRSLST
Trigger: AGTCGAGAGAGACCTGGACAAGGCTGATGGTATGAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATCATACCATCAGCCTaGTCCAGGTCTCTCTCGACT +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQIIPSA*SRSLST
Trigger: AGTCGAGAGAGACCTGGACAAGGCTGATGGTATGAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCAGGCCAGCAGGTCTaGCAGGTAGCGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPGQQV*QVAQCG
Trigger: TCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGAGCCCGCTCGATCTaGGCCCGAAATTCCTCTATA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRARSI*ARNSSI
Trigger: TATAGAGGAATTTCGGGCCAAGATCGAGCGGGCTCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGAGCCCGCTCGATCTaGGCCCGAAATTCCTCTATA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRARSI*ARNSSI
Trigger: TATAGAGGAATTTCGGGCCAAGATCGAGCGGGCTCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGGAGTTCAGCAGCTTaGCATACTGCAGGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARSSAA*HTAGLG
Trigger: GCCTAGACCTGCAGTATGCAAAGCTGCTGAACTCCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGGCATTGGTCACCCTaGTGCACAGTCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRWHWSP*CTVTST
Trigger: GGTGGAGGTGACTGTGCACAAGGGTGACCAATGCCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACCCACCAGCTGGCATaGGTCACCCTTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTHQLA*VTLVHS
Trigger: ACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVQVAQS*SLLLGL
Trigger: AAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATGCAGCCGGATATCCTaGAGCTCCGAGATGCATCGC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRCSRIS*SSEMHR
Trigger: GCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCATCTCTTAGGGTGTaGAATACTGGCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSSLRV*NTGCCA
Trigger: GGCACAGCAGCCAGTATTCAACACCCTAAGAGATGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAACTGCCTCTGCCTCTaGGCCTCCTCCGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVNCLCL*ASSARA
Trigger: TGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSASFS*SAISAS
Trigger: GGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSASFS*SAISAS
Trigger: GGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCTCGATGTCAGCCTaGTGCAGTGCCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSSMSA*CSAACS
Trigger: GGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATTGTGTCCTCCGCGTaGCTGCGAATGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVIVSSA*LRMRPS
Trigger: GCTGGGGCGCATTCGCAGCAACGCGGAGGACACAAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSTLA*SRSTSS
Trigger: GGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRCVLS*SRRMRA
Trigger: GGCCCTCATCCTTCGTGACAAGGACAACACACAGCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGARKRCV*SLSRRM
Trigger: CATCCTTCGTGACAAGGACAACACACAGCGCTTCCT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCAACTGCTGAGCCATTaGCTCCTTGTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVQLLSH*LLVLLQ
Trigger: CTGCAGGAGGACAAGGAGCAAATGGCTCAGCAGTTG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCCTTCACAGCCTCATaGACTGTCAGCCGCCGATTC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSFTAS*TVSRRF
Trigger: GAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCCTTCACAGCCTCATaGACTGTCAGCCGCCGATTC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSFTAS*TVSRRF
Trigger: GAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCAGCTGACAGCAGTTaGTGGTGCAGCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSADSS*WCSSGP
Trigger: GGGTCCTGAGCTGCACCACAAACTGCTGTCAGCTGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGGCACACGGTGGCTTTaGCTGGGGTCTACAATGCCA +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRGTRWL*LGSTMP
Trigger: TGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGACCGGCACCGCTGTaGGAGCTGGCTGTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRPAPL*ELAVGD
Trigger: GTCACCTACAGCCAGCTCCAACAGCGGTGCCGGTCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACAGGAACCTCAACCTaGGCCTGCTCCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTGTST*ACSSVS
Trigger: GGAGACACTGGAGCAGGCCAAGGTTGAGGTTCCTGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATGGACATACAGACGTaGGTTCCGCACAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVMDIQT*VPHRVH
Trigger: GTGGACCCTGTGCGGAACCAACGTCTGTATGTCCAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTTGGTGTCATCACTaGGATCTGCCAGCACACGGT +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPWCHH*DLPAHG
Trigger: ACCGTGTGCTGGCAGATCCAAGTGATGACACCAAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTTGGTGTCATCACTaGGATCTGCCAGCACACGGT +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPWCHH*DLPAHG
Trigger: ACCGTGTGCTGGCAGATCCAAGTGATGACACCAAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGTCTTCTCTGCCCCTTaGAGTGGCAGGAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVVFSAP*SGRRRR
Trigger: CCTGCGCCTCCTGCCACTCAAAGGGGCAGAGAAGAC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTCCGGGATCATGTTaGACTGCATCACCTCCCACA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPPGSC*TASPPT
Trigger: TGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRIEVAA*VSHLQR
Trigger: CCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACT +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGATESRS*VASTKT
Trigger: AGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTTCCACCGTCAGCTaGAGTCCCTTGATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSTVS*SPLMGS
Trigger: TGACCCCATCAAGGGACTCAAGCTGACGGTGGAAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTCTTCCACCGTCAGCTaGAGTCCCTTGATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKSSTVS*SPLMGS
Trigger: TGACCCCATCAAGGGACTCAAGCTGACGGTGGAAGA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTTCCACCGTCAGCTaGAGTCCCTTGATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSTVS*SPLMGS
Trigger: TGACCCCATCAAGGGACTCAAGCTGACGGTGGAAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTGCGCACTGAGGACTaGGAGGATGTCTTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLRTED*EDVFRS
Trigger: GGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTGCGCACTGAGGACTaGGAGGATGTCTTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLRTED*EDVFRS
Trigger: GGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVITTRR*RTEDLE
Trigger: CTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTACACAGACATCTCCTaGCCCGTCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVYTDIS*PVSGST
Trigger: TGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGTA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTACACAGACATCTCCTaGCCCGTCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKYTDIS*PVSGST
Trigger: TGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGTA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTACACAGACATCTCCTaGCCCGTCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSYTDIS*PVSGST
Trigger: TGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGTA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCGATGATCATAGACTaGACGACGCCATCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSMIID*TTPSEE
Trigger: CTCCTCAGATGGCGTCGTCAAGTCTATGATCATCGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGTCGATGATCATAGACTaGACGACGCCATCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWSMIID*TTPSEE
Trigger: CTCCTCAGATGGCGTCGTCAAGTCTATGATCATCGA...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVLSTRP*LTASVT
Trigger: GGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGTTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKLSTRP*LTASVT
Trigger: GGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAA...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRSTMI*STRPLL
Trigger: CAACAAGGGCCTGGTGGACAAGATCATGGTAGACCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRSTMI*STRPLL
Trigger: CAACAAGGGCCTGGTGGACAAGATCATGGTAGACCG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCCGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRSTMI*STRPLL
Trigger: CAACAAGGGCCTGGTGGACAAGATCATGGTAGACCG...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGCCTTCTGGGCCAGATaGATACGGTCTACCATGATC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAAFWAR*IRSTMI
Trigger: GATCATGGTAGACCGTATCAATCTGGCCCAGAAGGC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCTGACATCTTGGTCTaGGTGCGTGGGTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSADILV*VRGSSN
Trigger: GTTTGAGGACCCACGCACCAAGACCAAGATGTCAGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATCTTGAGCTTGGTCTaGGGGCACGTGAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAILSLV*GHVRYL
Trigger: CAAGTACCTCACGTGCCCCAAGACCAAGCTCAAGAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCGGTCTCGTTCATCTTaGAGGGAGCTGATCTCGTGC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRSRSS*RELISC
Trigger: GCACGAGATCAGCTCCCTCAAAGATGAACGAGACCG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071869.12
CDS TCA 90 bp CTGCAGCAGAGTCCGCACGGAGCCCACCTCGGACAGCTCTTTGACTaGTGTCTTGCCATCCTTGAGCTGGTCAAACTGAGCTCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LQQSPHGAHLGQLFD*CLAILELVKLSSAE
Trigger: CTCAGCAGAGCTCAGTTTGACCAGCTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTCCGAGGTGGGCTCCGTGCGGACTCTGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp ACTCACACTCCTGCTCCGACAACTCCAGGTACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCTCGTACACAGACATCTCCTTGCCCG +
Preference number: 5 (lower is better)
Translates to: THTPAPTTPGTSGGQ*DPCGRPRTQTSPCP
Trigger: CGGGCAAGGAGATGTCTGTGTACGAGGCCTACCGCAAGGGTCTCATTGACCACCAGACGTACCTGGAGTTGTCGGAGCAGGAGTGTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp GCGACCAGAGCGGCGGTCGATGATCATAGACTTGACGACGCCATCTaGGGAGGAGATGGTGATCTCTTCCCACTCACACTCCTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: ATRAAVDDHRLDDAI*GGDGDLFPLTLLLR
Trigger: TCGGAGCAGGAGTGTGAGTGGGAAGAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAGTCTATGATCATCGACCGCCGCTCTGGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp AACGGAAGCCACCGGCATTGCCTGAGAGCATGTCAGCAAACTCAGTaGTCGAAAGCGTACCAGCGCGGTACTGGTCCAGTGCTGAGCGGT +
Preference number: 5 (lower is better)
Translates to: NGSHRHCLRACQQTQ*SKAYQRGTGPVLSG
Trigger: ACCGCTCAGCACTGGACCAGTACCGCGCTGGTACGCTTTCGATCACTGAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TTCAGCCGGAGGTTGTACTCAGTGCGGATGGCTACCAGGCGCTCATaGAGACGATACACCCTCCGGTACATCTGTTCACCCTGTGGATGC +
Preference number: 5 (lower is better)
Translates to: FSRRLYSVRMATRRS*RRYTLRYICSPCGC
Trigger: GCATCCACAGGGTGAACAGATGTACCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCCGGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp TTTTCAGCTTCAATGCGAGCCTTGAGCTTGCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGCTCCTCCTCTACCTGGCTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: FSASMRALSLPSSSI*TRTEKSSSSTWLRC
Trigger: GCAGCGCAGCCAGGTAGAGGAGGAGCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGCTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp AAGCTCTTCTGCAGGGCCTGGGTCTCCTGCAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCCGACTTGAGCTGCAGTAACTTCGCC +
Preference number: 5 (lower is better)
Translates to: KLFCRAWVSCSICSC*TVCISSDLSCSNFA
Trigger: GGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCAGAGAGGAAGCTCTTCTGCAGGGCCTGGGTCTCCTGCAGTATCTaGTCCTGCTGCACAGTCTGCATCTCCTCCGACTTGAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SERKLFCRAWVSCSI*SCCTVCISSDLSCS
Trigger: ACTGCAGCTCAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CTGTCCTTCTCAGAGAGGAAGCTCTTCTGCAGGGCCTGGGTCTCCTaGAGTATCTGCTCCTGCTGCACAGTCTGCATCTCCTCCGACTTG +
Preference number: 5 (lower is better)
Translates to: LSFSERKLFCRAWVS*SICSCCTVCISSDL
Trigger: CAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTCTGAGAAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CTGTCCTTCTCAGAGAGGAAGCTCTTCTGCAGGGCCTGGGTCTCCTaGAGTATCTGCTCCTGCTGCACAGTCTGCATCTCCTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSFSERKLFCRAWVS*SICSCCTVCISSSS
Trigger: GGAAGAGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTCTGAGAAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165210.8
CDS CCA 90 bp TCTTCAAAGCTGGAGGGGAACTTGCGCTCCTCAAAAGCAGCGGTGTaGTGCCGGATCCATTGCAGCAGCAGCAACACAAGCTCCCGGTAC +
Preference number: 5 (lower is better)
Translates to: SSKLEGNLRSSKAAV*CRIHCSSSNTSSRY
Trigger: GTACCGGGAGCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCACACCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTTTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGGGTCAGCTTGGGGTaGCCGTCAGCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRVSLG*PSAMSS
Trigger: TGATGACATTGCTGACGGCAACCCCAAGCTGACCCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATTTTTGTCTGCCTCCTaGGCAGGAAGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAFLSAS*AGSSVS
Trigger: GGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACTTTGGACCGGTTTTaGTCTGCCTCCTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTLDRF*SASLAG
Trigger: TCCTGCCAAGGAGGCAGACAAAAACCGGTCCAAAGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCACTTTGGACCGGTTTTaGTCTGCCTCCTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSTLDRF*SASLAG
Trigger: TCCTGCCAAGGAGGCAGACAAAAACCGGTCCAAAGT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACTTTGGACCGGTTTTaGTCTGCCTCCTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTLDRF*SASLAG
Trigger: TCCTGCCAAGGAGGCAGACAAAAACCGGTCCAAAGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAAACTCGCTTCGCAGTaGCTTCTCCCGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRKLASQ*LLPLQD
Trigger: ATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTTT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGAGGGTCTGCACATCATaGAACAACAGCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQRVCTS*NNSRII
Trigger: TATGATCCGGCTGTTGTTCAATGATGTGCAGACCCT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGGGTCTGCACATCATaGAACAACAGCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWRVCTS*NNSRII
Trigger: TATGATCCGGCTGTTGTTCAATGATGTGCAGACCCT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCT +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAFSRR*YSVRMA
Trigger: AGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACGAGCCCGCTCGATCTaGGCCCGAAATTCCTCTATA +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRARSI*ARNSSI
Trigger: TATAGAGGAATTTCGGGCCAAGATCGAGCGGGCTCG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGGAGTTCAGCAGCTTaGCATACTGCAGGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRSSAA*HTAGLG
Trigger: GCCTAGACCTGCAGTATGCAAAGCTGCTGAACTCCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCCCTGAGAGGTGCCCCTaGTACTCATTCAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSPERCP*YSFSCS
Trigger: GGAACAACTGAATGAGTACAAGGGGCACCTCTCAGG...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGCCTGAGAGGTGCCCCTaGTACTCATTCAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKPERCP*YSFSCS
Trigger: GGAACAACTGAATGAGTACAAGGGGCACCTCTCAGG...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGTGGCTTCAAGCTCTaGGAGAGTGGCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGGFKL*ESGRHS
Trigger: GCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCATCTCTTAGGGTGTaGAATACTGGCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASSLRV*NTGCCA
Trigger: GGCACAGCAGCCAGTATTCAACACCCTAAGAGATGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGTCTCACTGATGAACTaGATATACTGGCTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQVSLMN*IYWLVS
Trigger: GCTCACGAGCCAGTATATCAAGTTCATCAGTGAGAC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGTCTCACTGATGAACTaGATATACTGGCTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWVSLMN*IYWLVS
Trigger: GCTCACGAGCCAGTATATCAAGTTCATCAGTGAGAC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCTCCTCTGCCCGCTGTaGCTCAGCCAGCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILLCPL*LSQPLL
Trigger: GAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGAG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCAAAGGATGCCCGCTaGCTCTGCAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAKDAR*LCSSTS
Trigger: GGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCAGGCGGATCAGCTCTaGCTCCGCAGCCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIQADQL*LRSQAL
Trigger: CAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCGCTGCTGCTCACCTaGCTCTGTCTCGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPLLLT*LCLGPQ
Trigger: CTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAGCGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSASFS*SAISAS
Trigger: GGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISLSDA*RSWARR
Trigger: GCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTTCAATGCGAGCCTaGAGCTTGCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVASMRA*SLPSSS
Trigger: GGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRKRCV*SLSRRM
Trigger: CATCCTTCGTGACAAGGACAACACACAGCGCTTCCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRKRCV*SLSRRM
Trigger: CATCCTTCGTGACAAGGACAACACACAGCGCTTCCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRKRCV*SLSRRM
Trigger: CATCCTTCGTGACAAGGACAACACACAGCGCTTCCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACAACTGCTGAGCCATTaGCTCCTTGTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRQLLSH*LLVLLQ
Trigger: CTGCAGGAGGACAAGGAGCAAATGGCTCAGCAGTTG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTGCAGTTCCTCTTGCTaGCGCCTCACGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVCSSSC*RLTPSS
Trigger: TGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGCA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GACCCCAGTGCCTCCACAGGGAGCCCGGCCACATGCAGAGCGGGAAGGCAGGATACTGTGATGACGATTTaGATGATTTTCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: DPSASTGSPATCRAGRQDTVMTI*MIFSTV
Trigger: CACGGTGGAGAAAATCATCAAAATCGTCATCACAGT...ATCCTGCCTTCCCGCTCTGCATGTGGCCGGGCTCCCTGTGGAGGCACTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGATGGTGATGACAATCTaGATGACCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWMVMTI*MTFSTV
Trigger: CACCGTGGAGAAGGTCATCAAGATTGTCATCACCAT...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGATGGTGATGACAATCTaGATGACCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQMVMTI*MTFSTV
Trigger: CACCGTGGAGAAGGTCATCAAGATTGTCATCACCAT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCTCTGCTGAGGATCTaGGCGTCCAGGAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVALLRI*ASRSSL
Trigger: CAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACCTCGGACAGCTCTTaGACTGATGTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTSDSS*TDVLPS
Trigger: GGATGGCAAGACATCAGTCAAAGAGCTGTCCGAGGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACCTCGGACAGCTCTTaGACTGATGTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTSDSS*TDVLPS
Trigger: GGATGGCAAGACATCAGTCAAAGAGCTGTCCGAGGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCCTCGTCCATGACTaGAGAGCGTACCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGLVHD*RAYQLL
Trigger: GAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACT +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTESRS*VASTKT
Trigger: AGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACT +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTESRS*VASTKT
Trigger: AGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCAGCTGACAGCAGCTaGTCCTTGAACTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSADSS*SLNSGP
Trigger: GGGCCCCGAGTTCAAGGACAAGCTGCTGTCAGCTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTGCGCACTGAGGACTaGGAGGATGTCTTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLRTED*EDVFRS
Trigger: GGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCGATGATCATAGACTaGACGACGCCATCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASMIID*TTPSEE
Trigger: CTCCTCAGATGGCGTCGTCAAGTCTATGATCATCGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGGAAGCCACCGGCATaGCCTGAGAGCATGTCAGCA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRKPPA*PESMSA
Trigger: TGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCACCAGGCCCTTGTaGACAGCTTCAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSTRPL*TASVTG
Trigger: CCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRLSTRP*LTASVT
Trigger: GGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGCCTTCTGGGCCAGATaGATACGGTCTACCATGATC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVAFWAR*IRSTMI
Trigger: GATCATGGTAGACCGTATCAATCTGGCCCAGAAGGC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGCCTTCTGGGCCAGATaGATACGGTCTACCATGATC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSAFWAR*IRSTMI
Trigger: GATCATGGTAGACCGTATCAATCTGGCCCAGAAGGC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCTGACATCTTGGTCTaGGTGCGTGGGTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRADILV*VRGSSN
Trigger: GTTTGAGGACCCACGCACCAAGACCAAGATGTCAGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATCTTGAGCTTGGTCTaGGGGCACGTGAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKILSLV*GHVRYL
Trigger: CAAGTACCTCACGTGCCCCAAGACCAAGCTCAAGAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATCTTGAGCTTGGTCTaGGGGCACGTGAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSILSLV*GHVRYL
Trigger: CAAGTACCTCACGTGCCCCAAGACCAAGCTCAAGAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATCTTGAGCTTGGTCTaGGGGCACGTGAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVILSLV*GHVRYL
Trigger: CAAGTACCTCACGTGCCCCAAGACCAAGCTCAAGAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTGCCCTCCAGTGCTaGATAAGGTGTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASALQC*IRCLLT
Trigger: GGTCAACAAACACCTTATCAAGCACTGGAGGGCAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCATGACCTGTAGATaGGTGACGCCGGGCACATGG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRMTCR*VTPGTW
Trigger: CCATGTGCCCGGCGTCACCAATCTACAGGTCATGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCAGAGGCCCCCTCTTaGGTGGGCAGCCTAGGGGAC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAEAPS*VGSLGD
Trigger: GTCCCCTAGGCTGCCCACCAAAGAGGGGGCCTCTGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
CDS TCA 90 bp GAAGTTGTCACAGCGCAGGCCTTGGTAGCCCTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTCCTTTGCTGTCATGTCCTCCGACTG +
Preference number: 5 (lower is better)
Translates to: EVVTAQALVALYHTL*PQQQLLLCCHVLRL
Trigger: CAGTCGGAGGACATGACAGCAAAGGAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAGGGCTACCAAGGCCTGCGCTGTGACAACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169714.8
ENSMUST00000171634.8
CDS TCA 90 bp GCGTGGCTTCAACTGCACAATAGCCTTGGCCCGCTTGGCCAGGCCTaGGAGGTGCCCCTTGTACTCATTCAGTTGTTCCTTCTCATCCTG +
Preference number: 5 (lower is better)
Translates to: AWLQLHNSLGPLGQA*EVPLVLIQLFLLIL
Trigger: CAGGATGAGAAGGAACAACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 90 bp GACAGCTCTTTGACTGATGTCTTGCCATCCTTGAGCTGGTCAAACTaGGCTCTGCTGAGGATCTTGGCGTCCAGGAGCTCACTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: DSSLTDVLPSLSWSN*ALLRILASRSSLAG
Trigger: GCCGGCCAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGCTCAGTTTGACCAGCTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp CCTGGTTCAGCTGCTCCTCACACAGCCCAGCCTCCATCTGTAGCTTaGTCACAATGCGCTGAAGACACTCCAGCCTCTCAAACTCGCTTC +
Preference number: 5 (lower is better)
Translates to: PGSAAPHTAQPPSVA*SQCAEDTPASQTRF
Trigger: GAAGCGAGTTTGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAAGCTACAGATGGAGGCTGGGCTGTGTGAGGAGCAGCTGAACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp AGGAAGCTCTTCTGCAGGGCCTGGGTCTCCTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCCTCCGACTTGAGCTGCAGTAACTTC +
Preference number: 5 (lower is better)
Translates to: RKLFCRAWVSCSICS*CTVCISSDLSCSNF
Trigger: GAAGTTACTGCAGCTCAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp GCAGCTGCCGCTGTAGGGCTGTGTAGACACTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTGCAATGCTGCTGCGGCCCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: AAAAVGLCRHSVSHW*ASVTVLQCCCGPSG
Trigger: ACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTACTGAAGCCCACCAATGAGAAACTGAGTGTCTACACAGCCCTACAGCGGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp GAGCGGTCAATGAGGTTCTTGGTGATGGCGTCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCGATGATCATAGACTTGACGACGCCA +
Preference number: 5 (lower is better)
Translates to: ERSMRFLVMASSMSY*RPERRSMIIDLTTP
Trigger: TGGCGTCGTCAAGTCTATGATCATCGACCGCCGCTCTGGTCGCCAGTATGACATCGACGACGCCATCACCAAGAACCTCATTGACCGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGGTGGATGATAGCATaGAAGAGACGGCCATCGCGC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRWMIA*KRRPSR
Trigger: GCGCGATGGCCGTCTCTTCAATGCTATCATCCACCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGTCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTA +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQSRFSR*VCRYTL
Trigger: TAAAGTGTATCGACAGACCAACCTGGAGAACCTAGA...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGCAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: AAAPREGFHRLEESLGLWGSSVS*NFKNWH
Trigger: GTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCC...CCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQGSSVS*NFKNWH
Trigger: GTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCC...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTTTTTGTCTGCCTCCTaGGCAGGAAGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSFLSAS*AGSSVS
Trigger: GGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCATCATACCATCAGCCTaGTCCAGGTCTCTCTCGACT +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSIIPSA*SRSLST
Trigger: AGTCGAGAGAGACCTGGACAAGGCTGATGGTATGAT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATCATACCATCAGCCTaGTCCAGGTCTCTCTCGACT +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKIIPSA*SRSLST
Trigger: AGTCGAGAGAGACCTGGACAAGGCTGATGGTATGAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGGAGTTCAGCAGCTTaGCATACTGCAGGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRSSAA*HTAGLG
Trigger: GCCTAGACCTGCAGTATGCAAAGCTGCTGAACTCCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGACCTGAGAGGTGCCCCTaGTACTCATTCAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRPERCP*YSFSCS
Trigger: GGAACAACTGAATGAGTACAAGGGGCACCTCTCAGG...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTGGGCCTCCTGGTaGGGCGGCGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISWASW*GGGTRK
Trigger: CTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCATCTCTTAGGGTGTaGAATACTGGCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSSLRV*NTGCCA
Trigger: GGCACAGCAGCCAGTATTCAACACCCTAAGAGATGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCATCTCTTAGGGTGTaGAATACTGGCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSSLRV*NTGCCA
Trigger: GGCACAGCAGCCAGTATTCAACACCCTAAGAGATGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGTCTCACTGATGAACTaGATATACTGGCTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAVSLMN*IYWLVS
Trigger: GCTCACGAGCCAGTATATCAAGTTCATCAGTGAGAC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASACR*RWLSSC
Trigger: GCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCGCTCAGCCTCAGCTaGCTGCTGTGCCCGTCGCTC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISLSLS*LLCPSL
Trigger: GAGCGACGGGCACAGCAGCAAGCTGAGGCTGAGCGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRCVLS*SRRMRA
Trigger: GGCCCTCATCCTTCGTGACAAGGACAACACACAGCG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRKRCV*SLSRRM
Trigger: CATCCTTCGTGACAAGGACAACACACAGCGCTTCCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAAGAGCTGCTCCAGCTaGGCCTTCTCCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVKSCSS*AFSCSM
Trigger: CATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGASRP*GSAFVE
Trigger: TTCCACGAAGGCACTGCCCAACGGCCGGGATGCACC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCAGCTGACAGCAGTTaGTGGTGCAGCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSADSS*WCSSGP
Trigger: GGGTCCTGAGCTGCACCACAAACTGCTGTCAGCTGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGGCACACGGTGGCTTTaGCTGGGGTCTACAATGCCA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVGTRWL*LGSTMP
Trigger: TGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACAGGAACCTCAACCTaGGCCTGCTCCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTGTST*ACSSVS
Trigger: GGAGACACTGGAGCAGGCCAAGGTTGAGGTTCCTGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAATGGTGATGACAATCTaGATGACCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAMVMTI*MTFSTV
Trigger: CACCGTGGAGAAGGTCATCAAGATTGTCATCACCAT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVIEVAA*VSHLQR
Trigger: CCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACT +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTESRS*VASTKT
Trigger: AGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATGTTGTCTACCAGGTaGCGGTGCATGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVMLSTR*RCMASV
Trigger: CACGGAGGCCATGCACCGCAACCTGGTAGACAACAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGCCTTCTGGGCCAGATaGATACGGTCTACCATGATC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRAFWAR*IRSTMI
Trigger: GATCATGGTAGACCGTATCAATCTGGCCCAGAAGGC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp TCTTCTGCACACGGTCTCGTTCATCTTTCTTGCCCTCGGAGGCTCTaGGCACAGCCAGGTAGAGGTTGTCCTCTGAGCTGGTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: SSAHGLVHLSCPRRL*AQPGRGCPLSWFSC
Trigger: GCAAGAGAACCAGCTCAGAGGACAACCTCTACCTGGCTGTGCTCAGAGCCTCCGAGGGCAAGAAAGATGAACGAGACCGTGTGCAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023226.13
CDS GCA 90 bp TTCAACTGCACAATAGCCTTGGCCCGCTTGGCCAGGCCTGAGAGGTaGCCCTTGTACTCATTCAGTTGTTCCTTCTCATCCTGGGCATCC +
Preference number: 5 (lower is better)
Translates to: FNCTIALARLARPER*PLYSFSCSFSSWAS
Trigger: GGATGCCCAGGATGAGAAGGAACAACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp AGCTGCAGCCTCAGTGTGGTCAGCTCCTGCTCTACCTGGGCCTTCTaGCGGAGTGTCTGCTCTGCAAACTTTTTATGCTTCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: SCSLSVVSSCSTWAF*RSVCSANFLCFSIS
Trigger: GGAGATGGAGAAGCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAAGGCCCAGGTAGAGCAGGAGCTGACCACACTGAGGCTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp ACGCCATCTGAGGAGGAGATGGTGATCTCTTCCCACTCACACTCCTaGTCCGACAACTCCAGGTACGTCTGGTGGTCAATGAGACCCTTG +
Preference number: 5 (lower is better)
Translates to: TPSEEEMVISSHSHS*SDNSRYVWWSMRPL
Trigger: CAAGGGTCTCATTGACCACCAGACGTACCTGGAGTTGTCGGAGCAGGAGTGTGAGTGGGAAGAGATCACCATCTCCTCCTCAGATGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp AACTCATCTCTTAGGGTGTTGAATACTGGCTGCTGTGCCTCGGCCTaGGCCCGCAGCTTCTTTAGTGAGGCCTTGGTGGCTTCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: NSSLRVLNTGCCASA*ARSFFSEALVASSS
Trigger: AGAGCTTGAAGCCACCAAGGCCTCACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTCAACACCCTAAGAGATGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp GTCTCCTCTAGCTGCAGCCTCAGTGTGGTCAGCTCCTGCTCTACCTaGGCCTTCTGCCGGAGTGTCTGCTCTGCAAACTTTTTATGCTTC +
Preference number: 5 (lower is better)
Translates to: VSSSCSLSVVSSCST*AFCRSVCSANFLCF
Trigger: GAAGCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAAGGCCCAGGTAGAGCAGGAGCTGACCACACTGAGGCTGCAGCTAGAGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp AGCATGTCAGCAAACTCAGTGATCGAAAGCGTACCAGCGCGGTACTaGTCCAGTGCTGAGCGGTCAATGAGGTTCTTGGTGATGGCGTCG +
Preference number: 5 (lower is better)
Translates to: SMSANSVIESVPARY*SSAERSMRFLVMAS
Trigger: CGACGCCATCACCAAGAACCTCATTGACCGCTCAGCACTGGACCAGTACCGCGCTGGTACGCTTTCGATCACTGAGTTTGCTGACATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp ATCTTGGTCTTGGTGCGTGGGTCCTCAAACCCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCTACCATGATCTTGTCCACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: ILVLVRGSSNPQKAF*ARLIRSTMILSTRP
Trigger: GGGCCTGGTGGACAAGATCATGGTAGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGGCCGAGGGTCAGCTaGGGGTTGCCGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRPRVS*GLPSAM
Trigger: CATTGCTGACGGCAACCCCAAGCTGACCCTCGGCCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCAGCAGCTTCTCCTTaGCTGTCATGTCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAAASP*LSCPPT
Trigger: AGTCGGAGGACATGACAGCAAAGGAGAAGCTGCTGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCATCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTA +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGASRFSR*VCRYTL
Trigger: TAAAGTGTATCGACAGACCAACCTGGAGAACCTAGA...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGAGSSVS*NFKNWH
Trigger: GTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCC...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATTTTTGTCTGCCTCCTaGGCAGGAAGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRFLSAS*AGSSVS
Trigger: GGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAAACTCGCTTCGCAGTaGCTTCTCCCGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVKLASQ*LLPLQD
Trigger: ATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTTT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCAGGGTCTGCACATCATaGAACAACAGCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSRVCTS*NNSRII
Trigger: TATGATCCGGCTGTTGTTCAATGATGTGCAGACCCT...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGAGGGTCTGCACATCATaGAACAACAGCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKRVCTS*NNSRII
Trigger: TATGATCCGGCTGTTGTTCAATGATGTGCAGACCCT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCAGGGTCTGCACATCATaGAACAACAGCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVRVCTS*NNSRII
Trigger: TATGATCCGGCTGTTGTTCAATGATGTGCAGACCCT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCAGGCCAGCAGGTCTaGCAGGTAGCGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPGQQV*QVAQCG
Trigger: TCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIQVAQS*SLLLGL
Trigger: AAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCATCTCTTAGGGTGTaGAATACTGGCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSSLRV*NTGCCA
Trigger: GGCACAGCAGCCAGTATTCAACACCCTAAGAGATGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGGTCTCACTGATGAACTaGATATACTGGCTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKVSLMN*IYWLVS
Trigger: GCTCACGAGCCAGTATATCAAGTTCATCAGTGAGAC...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGTCTCACTGATGAACTaGATATACTGGCTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSVSLMN*IYWLVS
Trigger: GCTCACGAGCCAGTATATCAAGTTCATCAGTGAGAC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAACTGCCTCTGCCTCTaGGCCTCCTCCGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDINCLCL*ASSARA
Trigger: TGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSASFS*SAISAS
Trigger: GGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTCGATGTCAGCCTaGTGCAGTGCCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSMSA*CSAACS
Trigger: GGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAPCCA*CPPRCC
Trigger: GCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCAACTGCTGAGCCATTaGCTCCTTGTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVQLLSH*LLVLLQ
Trigger: CTGCAGGAGGACAAGGAGCAAATGGCTCAGCAGTTG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCCTTCACAGCCTCATaGACTGTCAGCCGCCGATTC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSFTAS*TVSRRF
Trigger: GAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GGCCTCTGGAGCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGACTGTGATGACGATTTaGATGATTTTCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: GLWSRRSLRSAEPSSPAQTVMTI*MIFSTV
Trigger: CACGGTGGAGAAAATCATCAAAATCGTCATCACAGT...CTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGCTCCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGACCGGCACCGCTGTaGGAGCTGGCTGTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRPAPL*ELAVGD
Trigger: GTCACCTACAGCCAGCTCCAACAGCGGTGCCGGTCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGATGGTGATGACAATCTaGATGACCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKMVMTI*MTFSTV
Trigger: CACCGTGGAGAAGGTCATCAAGATTGTCATCACCAT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCATGGTGATGACAATCTaGATGACCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVMVMTI*MTFSTV
Trigger: CACCGTGGAGAAGGTCATCAAGATTGTCATCACCAT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATGGACATACAGACGTaGGTTCCGCACAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVMDIQT*VPHRVH
Trigger: GTGGACCCTGTGCGGAACCAACGTCTGTATGTCCAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTTGGTGTCATCACTaGGATCTGCCAGCACACGGT +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPWCHH*DLPAHG
Trigger: ACCGTGTGCTGGCAGATCCAAGTGATGACACCAAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTCCGGGATCATGTTaGACTGCATCACCTCCCACA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPPGSC*TASPPT
Trigger: TGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTACACAGACATCTCCTaGCCCGTCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVYTDIS*PVSGST
Trigger: TGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGTA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCGATGATCATAGACTaGACGACGCCATCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSMIID*TTPSEE
Trigger: CTCCTCAGATGGCGTCGTCAAGTCTATGATCATCGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGATCTGCCCTCCAGTGCTaGATAAGGTGTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRSALQC*IRCLLT
Trigger: GGTCAACAAACACCTTATCAAGCACTGGAGGGCAGA...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS TCA 90 bp TTGTGGCCATCACGGAGGTCTTCGTACAGGTCACTGATGTGCCTCTaGGCCTCTGCCCTCCAGTGCTTGATAAGGTGTTTGTTGACCCAC +
Preference number: 5 (lower is better)
Translates to: LWPSRRSSYRSLMCL*ASALQCLIRCLLTH
Trigger: GTGGGTCAACAAACACCTTATCAAGCACTGGAGGGCAGAGGCTCAGAGGCACATCAGTGACCTGTACGAAGACCTCCGTGATGGCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000171634.8
CDS GCA 90 bp ACTGGCACCATAGGATCTCAATCTCTTCAAAGCTGGAGGGGAACTTaGGCTCCTCAAAAGCAGCGGTGTGGTGCCGGATCCATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: TGTIGSQSLQSWRGT*APQKQRCGAGSIAA
Trigger: TGCTGCAATGGATCCGGCACCACACCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTGAGATCCTATGGTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp GTGCGGTCACAGCTGTACTTCCTGCGTAACGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCCCGAACATCTGAGAAGAACTGGAAG +
Preference number: 5 (lower is better)
Translates to: VRSQLYFLRNVSCSF*NCSSASRTSEKNWK
Trigger: CTTCCAGTTCTTCTCAGATGTTCGGGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGACGTTACGCAGGAAGTACAGCTGTGACCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp ACAATCTTGATGACCTTCTCCACGGTGACCTTGCCTGTGCGGAACTaGCGCAGCAACTCCTGCCGCTGCTCCTCAGTAAAGTATTCAGAG +
Preference number: 5 (lower is better)
Translates to: TILMTFSTVTLPVRN*RSNSCRCSSVKYSE
Trigger: CTCTGAATACTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCAGTTCCGCACAGGCAAGGTCACCGTGGAGAAGGTCATCAAGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp TCCTTCAGCTGCTCCTCATGGGTTTTAAGCACCTCCTCAGCCCCCTaGGTACTGCGAATCACCAAGCTGATGGTCTTGAGTTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SFSCSSWVLSTSSAP*VLRITKLMVLSFSR
Trigger: CCTGGAGAAACTCAAGACCATCAGCTTGGTGATTCGCAGTACCCAGGGGGCTGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCTCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTA +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVSRFSR*VCRYTL
Trigger: TAAAGTGTATCGACAGACCAACCTGGAGAACCTAGA...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTA +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSSRFSR*VCRYTL
Trigger: TAAAGTGTATCGACAGACCAACCTGGAGAACCTAGA...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAGGCCTCAAGAGCTGTCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: RGLKSCLLTRLSPVPLSSGSSVS*NFKNWH
Trigger: GTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCC...GCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGACAGCTCTTGAGGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVGSSVS*NFKNWH
Trigger: GTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCC...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACTTTGGACCGGTTTTaGTCTGCCTCCTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTLDRF*SASLAG
Trigger: TCCTGCCAAGGAGGCAGACAAAAACCGGTCCAAAGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAAGGGTCTGCACATCATaGAACAACAGCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRRVCTS*NNSRII
Trigger: TATGATCCGGCTGTTGTTCAATGATGTGCAGACCCT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCT +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAFSRR*YSVRMA
Trigger: AGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGCCTGAGAGGTGCCCCTaGTACTCATTCAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVPERCP*YSFSCS
Trigger: GGAACAACTGAATGAGTACAAGGGGCACCTCTCAGG...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAACTGCACAATAGCCTaGGCCCGCTTGGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDINCTIA*ARLARP
Trigger: AGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGGACCTGTTCCAGCTaGCCCAGGGTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRTCSS*PRVSSN
Trigger: GTTGGAACTGACCCTGGGCAAGCTGGAACAGGTCCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGTGGCTTCAAGCTCTaGGAGAGTGGCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGGFKL*ESGRHS
Trigger: GCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAGTCTCACTGATGAACTaGATATACTGGCTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRVSLMN*IYWLVS
Trigger: GCTCACGAGCCAGTATATCAAGTTCATCAGTGAGAC...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCAAAGGATGCCCGCTaGCTCTGCAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAKDAR*LCSSTS
Trigger: GGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTTCAATGCGAGCCTaGAGCTTGCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIASMRA*SLPSSS
Trigger: GGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCAGTTCCTCTTGCTaGCGCCTCACGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICSSSC*RLTPSS
Trigger: TGAGGAGGGCGTGAGGCGCAAGCAAGAGGAACTGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp CAGCACCCAGAGAGGGGTTCCACAGGCTTGAAGAGTCCCTGGGCCTCTGGAGCAACTGTGATGACGATTTaGATGATTTTCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: QHPERGSTGLKSPWASGATVMTI*MIFSTV
Trigger: CACGGTGGAGAAAATCATCAAAATCGTCATCACAGT...TGCTCCAGAGGCCCAGGGACTCTTCAAGCCTGTGGAACCCCTCTCTGGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAATGGTGATGACAATCTaGATGACCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRMVMTI*MTFSTV
Trigger: CACCGTGGAGAAGGTCATCAAGATTGTCATCACCAT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTCTGCTGAGGATCTaGGCGTCCAGGAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIALLRI*ASRSSL
Trigger: CAGTGAGCTCCTGGACGCCAAGATCCTCAGCAGAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCCTCGTCCATGACTaGAGAGCGTACCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGLVHD*RAYQLL
Trigger: GAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACT +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTESRS*VASTKT
Trigger: AGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCAGCTGACAGCAGCTaGTCCTTGAACTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISADSS*SLNSGP
Trigger: GGGCCCCGAGTTCAAGGACAAGCTGCTGTCAGCTGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGGCCTTCTGGGCCAGATaGATACGGTCTACCATGATC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVAFWAR*IRSTMI
Trigger: GATCATGGTAGACCGTATCAATCTGGCCCAGAAGGC...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGGCAGCTGACATCTaGGTCTTGGTGCGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWAADI*VLVRGS
Trigger: GGACCCACGCACCAAGACCAAGATGTCAGCTGCCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATCTTGAGCTTGGTCTaGGGGCACGTGAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVILSLV*GHVRYL
Trigger: CAAGTACCTCACGTGCCCCAAGACCAAGCTCAAGAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp AAACTCAGTGATCGAAAGCGTACCAGCGCGGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTTGGTGATGGCGTCGTCGATGTCATA +
Preference number: 5 (lower is better)
Translates to: KLSDRKRTSAVLVQC*AVNEVLGDGVVDVI
Trigger: TATGACATCGACGACGCCATCACCAAGAACCTCATTGACCGCTCAGCACTGGACCAGTACCGCGCTGGTACGCTTTCGATCACTGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TCATGCAGACGATACACCCTCCGGTACATCTGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTCTGCACATCATTGAACAACAGCCGG +
Preference number: 5 (lower is better)
Translates to: SCRRYTLRYICSPCG*RPSLRVCTSLNNSR
Trigger: CCGGCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGGGCGGCATCCACAGGGTGAACAGATGTACCGGAGGGTGTATCGTCTGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 90 bp TCAACAAAGACTCCGGCAATGCAGCTGGTACCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCCTCGATGGAGGTCAGGCCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: STKTPAMQLVPSRNF*RFLVTSSMEVRPSC
Trigger: ACAAGAAGGCCTGACCTCCATCGAGGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGGTACCAGCTGCATTGCCGGAGTCTTTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp GCGCTCATGCAGACGATACACCCTCCGGTACATCTGTTCACCCTGTaGATGCCGCCCATCTTTAAGGGTCTGCACATCATTGAACAACAG +
Preference number: 5 (lower is better)
Translates to: ALMQTIHPPVHLFTL*MPPIFKGLHIIEQQ
Trigger: CTGTTGTTCAATGATGTGCAGACCCTTAAAGATGGGCGGCATCCACAGGGTGAACAGATGTACCGGAGGGTGTATCGTCTGCATGAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGGTGGATGATAGCATaGAAGAGACGGCCATCGCGC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRWMIA*KRRPSR
Trigger: GCGCGATGGCCGTCTCTTCAATGCTATCATCCACCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIKLEGN*RSSKAA
Trigger: CGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTTTTTGTCTGCCTCCTaGGCAGGAAGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVFLSAS*AGSSVS
Trigger: GGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATGGCCACATGCAGCTaGCCCCACTCCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIMATCS*PHSFST
Trigger: TGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATCATACCATCAGCCTaGTCCAGGTCTCTCTCGACT +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVIIPSA*SRSLST
Trigger: AGTCGAGAGAGACCTGGACAAGGCTGATGGTATGAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGGCATTGGTCACCCTaGTGCACAGTCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIWHWSP*CTVTST
Trigger: GGTGGAGGTGACTGTGCACAAGGGTGACCAATGCCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACCCACCAGCTGGCATaGGTCACCCTTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITHQLA*VTLVHS
Trigger: ACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTGCAGCCGGATATCCTaGAGCTCCGAGATGCATCGC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDICSRIS*SSEMHR
Trigger: GCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSTLA*SRSTSS
Trigger: GGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAAGAGCTGCTCCAGCTaGGCCTTCTCCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIKSCSS*AFSCSM
Trigger: CATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp AGAACCCAGGAGATTGAAGTGGTCACTGGGCCTGGGCCAGCCCTGTTCCCCAAGACTGTGATGACGATTTaGATGATTTTCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: RTQEIEVVTGPGPALFPKTVMTI*MIFSTV
Trigger: CACGGTGGAGAAAATCATCAAAATCGTCATCACAGT...CTTGGGGAACAGGGCTGGCCCAGGCCCAGTGACCACTTCAATCTCCTGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GCAGGAGAAGTCTCAGATCTGCAGAACCCTCCAGCCCCGCCCAGCCAGAATGTCACTGTGATGACGATTTaGATGATTTTCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: AGEVSDLQNPPAPPSQNVTVMTI*MIFSTV
Trigger: CACGGTGGAGAAAATCATCAAAATCGTCATCACAGT...GACATTCTGGCTGGGCGGGGCTGGAGGGTTCTGCAGATCTGAGACTTCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGCACACGGTGGCTTTaGCTGGGGTCTACAATGCCA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGTRWL*LGSTMP
Trigger: TGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACAGGAACCTCAACCTaGGCCTGCTCCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITGTST*ACSSVS
Trigger: GGAGACACTGGAGCAGGCCAAGGTTGAGGTTCCTGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIIEVAA*VSHLQR
Trigger: CCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTGCCCTCCAGTGCTaGATAAGGTGTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSALQC*IRCLLT
Trigger: GGTCAACAAACACCTTATCAAGCACTGGAGGGCAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000073418.13
ENSMUST00000089610.10
CDS GCA 90 bp CGGTACATCTGTTCACCCTGTGGATGCCGCCCATCTTTAAGGGTCTaGACATCATTGAACAACAGCCGGATCATACCATCAGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RYICSPCGCRPSLRV*TSLNNSRIIPSALS
Trigger: GGACAAGGCTGATGGTATGATCCGGCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGGGCGGCATCCACAGGGTGAACAGATGTACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCAGCAGCTTCTCCTTaGCTGTCATGTCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAAASP*LSCPPT
Trigger: AGTCGGAGGACATGACAGCAAAGGAGAAGCTGCTGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169714.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAAACTCGCTTCGCAGTaGCTTCTCCCGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIKLASQ*LLPLQD
Trigger: ATCCTGGAGCGGGAGAAGCAACTGCGAAGCGAGTTT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGAGGGTCTGCACATCATaGAACAACAGCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVRVCTS*NNSRII
Trigger: TATGATCCGGCTGTTGTTCAATGATGTGCAGACCCT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCGAGCCCGCTCGATCTaGGCCCGAAATTCCTCTATA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRARSI*ARNSSI
Trigger: TATAGAGGAATTTCGGGCCAAGATCGAGCGGGCTCG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISASFS*SAISAS
Trigger: GGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCAACTGCTGAGCCATTaGCTCCTTGTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIQLLSH*LLVLLQ
Trigger: CTGCAGGAGGACAAGGAGCAAATGGCTCAGCAGTTG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCCTTCACAGCCTCATaGACTGTCAGCCGCCGATTC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISFTAS*TVSRRF
Trigger: GAATCGGCGGCTGACAGTCAATGAGGCTGTGAAGGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TCTGCTCACACGACTGTCCCCAGTTCCCCTCAGCAGCTAGGACCAGCAGGTAGAACTGTGATGACGATTTaGATGATTTTCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: SAHTTVPSSPQQLGPAGRTVMTI*MIFSTV
Trigger: CACGGTGGAGAAAATCATCAAAATCGTCATCACAGT...TCTACCTGCTGGTCCTAGCTGCTGAGGGGAACTGGGGACAGTCGTGTGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGATGGTGATGACAATCTaGATGACCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVMVMTI*MTFSTV
Trigger: CACCGTGGAGAAGGTCATCAAGATTGTCATCACCAT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATGGACATACAGACGTaGGTTCCGCACAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIMDIQT*VPHRVH
Trigger: GTGGACCCTGTGCGGAACCAACGTCTGTATGTCCAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCTTGGTGTCATCACTaGGATCTGCCAGCACACGGT +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPWCHH*DLPAHG
Trigger: ACCGTGTGCTGGCAGATCCAAGTGATGACACCAAGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCTCCGGGATCATGTTaGACTGCATCACCTCCCACA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPPGSC*TASPPT
Trigger: TGTGGGAGGTGATGCAGTCAAACATGATCCCGGAGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTGCGCACTGAGGACTaGGAGGATGTCTTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILRTED*EDVFRS
Trigger: GGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTACACAGACATCTCCTaGCCCGTCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIYTDIS*PVSGST
Trigger: TGTGGACCCAGAGACGGGCAAGGAGATGTCTGTGTA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDILSTRP*LTASVT
Trigger: GGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCTGACATCTTGGTCTaGGTGCGTGGGTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIADILV*VRGSSN
Trigger: GTTTGAGGACCCACGCACCAAGACCAAGATGTCAGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGTCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTA +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVSRFSR*VCRYTL
Trigger: TAAAGTGTATCGACAGACCAACCTGGAGAACCTAGA...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACTTTGGACCGGTTTTaGTCTGCCTCCTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITLDRF*SASLAG
Trigger: TCCTGCCAAGGAGGCAGACAAAAACCGGTCCAAAGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGGAGTTCAGCAGCTTaGCATACTGCAGGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRSSAA*HTAGLG
Trigger: GCCTAGACCTGCAGTATGCAAAGCTGCTGAACTCCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTCCTGAGAGGTGCCCCTaGTACTCATTCAGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIPERCP*YSFSCS
Trigger: GGAACAACTGAATGAGTACAAGGGGCACCTCTCAGG...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRKRCV*SLSRRM
Trigger: CATCCTTCGTGACAAGGACAACACACAGCGCTTCCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACCTCGGACAGCTCTTaGACTGATGTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITSDSS*TDVLPS
Trigger: GGATGGCAAGACATCAGTCAAAGAGCTGTCCGAGGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACT +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDITESRS*VASTKT
Trigger: AGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGCCTTCTGGGCCAGATaGATACGGTCTACCATGATC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIAFWAR*IRSTMI
Trigger: GATCATGGTAGACCGTATCAATCTGGCCCAGAAGGC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATCTTGAGCTTGGTCTaGGGGCACGTGAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIILSLV*GHVRYL
Trigger: CAAGTACCTCACGTGCCCCAAGACCAAGCTCAAGAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 90 bp TGTCGATACACTTTATTCATATCTATGAGCATGGGCTTGTGCCGGTaGATGATAGCATTGAAGAGACGGCCATCGCGCCAACTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CRYTLFISMSMGLCR*MIALKRRPSRQLVV
Trigger: CACCACCAGTTGGCGCGATGGCCGTCTCTTCAATGCTATCATCCACCGGCACAAGCCCATGCTCATAGATATGAATAAAGTGTATCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCATCTCTTAGGGTGTaGAATACTGGCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISSLRV*NTGCCA
Trigger: GGCACAGCAGCCAGTATTCAACACCCTAAGAGATGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp TTAGAGGTCTGGGGGCCTTTCCCAGATAGAATCCTCCCAGGAGAGACAGGAGTGACTGTGATGACGATTTaGATGATTTTCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: LEVWGPFPDRILPGETGVTVMTI*MIFSTV
Trigger: CACGGTGGAGAAAATCATCAAAATCGTCATCACAGT...CACTCCTGTCTCTCCTGGGAGGATTCTATCTGGGAAAGGCCCCCAGACCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCGATGATCATAGACTaGACGACGCCATCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISMIID*TTPSEE
Trigger: CTCCTCAGATGGCGTCGTCAAGTCTATGATCATCGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 90 bp TTGGTCTGTCGATACACTTTATTCATATCTATGAGCATGGGCTTGTaGCGGTGGATGATAGCATTGAAGAGACGGCCATCGCGCCAACTG +
Preference number: 5 (lower is better)
Translates to: LVCRYTLFISMSMGL*RWMIALKRRPSRQL
Trigger: CAGTTGGCGCGATGGCCGTCTCTTCAATGCTATCATCCACCGGCACAAGCCCATGCTCATAGATATGAATAAAGTGTATCGACAGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTAGGGTCTGCACATCATaGAACAACAGCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIRVCTS*NNSRII
Trigger: TATGATCCGGCTGTTGTTCAATGATGTGCAGACCCT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGTCTCACTGATGAACTaGATATACTGGCTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIVSLMN*IYWLVS
Trigger: GCTCACGAGCCAGTATATCAAGTTCATCAGTGAGAC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTATGGTGATGACAATCTaGATGACCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIMVMTI*MTFSTV
Trigger: CACCGTGGAGAAGGTCATCAAGATTGTCATCACCAT...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTTCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTA +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDISRFSR*VCRYTL
Trigger: TAAAGTGTATCGACAGACCAACCTGGAGAACCTAGA...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS-3UTR CAA 90 bp GTTGGCCTGGGATCTTCCCTTGGCCAGCAAAACCCACTGAATATACAGGACATTGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: VGLGSSLGQQNPLNIQDIGSSVS*NFKNWH
Trigger: GTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCC...AATGTCCTGTATATTCAGTGGGTTTTGCTGGCCAAGGGAAGATCCCAGGCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 90 bp TGGACCGGTTTTTGTCTGCCTCCTTGGCAGGAAGTTCTGTCTCCTTaGACTTCAAAAACTGGCACCATAGGATCTCAATCTCTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: WTGFCLPPWQEVLSP*TSKTGTIGSQSLQS
Trigger: GCTTTGAAGAGATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAACCGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp GCGCTGTGCCGTCTCCAGGGCCACCTGCACTTGGCGTaGCCGCTCTGCCTCGGCTTGGCGCAGCCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: ALCRLQGHLHLA*PLCLGLAQPPL
Trigger: GAGCGGCGGCTGCGCCAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCCGAGCGGCTTCCTCCTCCGCTGCCAGGCTCCTCTaGACGCGCTCCTCGGCCTCCCGGCGCCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: CRAASSSAARLL*TRSSASRRLCS
Trigger: GGAGCAGAGGCGCCGGGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGCGGAGGAGGAAGCCGCTCGGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CCTGGGCCCGACGCGCCGCCTCCTGCTCCGCTTCCTTaGGCAGCTTCTCTGCGGCCGCCTGCGCCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: PGPDAPPPAPLP*AASLRPPAPEP
Trigger: AGGCTCAGGCGCAGGCGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCGGGCCCAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCTGCCTGCTCTGCCTGGGCCCGACGCGCCGCCTCCTaGTCCGCTTCCTTGCGCAGCTTCTCTGCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: AACSAWARRAAS*SASLRSFSAAA
Trigger: GGCGGCCGCAGAGAAGCTGCGCAAGGAAGCGGAGCAGGAGGCGGCGCGTCGGGCCCAGGCAGAGCAGGCAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp AGGGCCCGCTGCTGCGCCAGGTCCTCCTCCGCTAGCTaGCTCAGCCGTGCTGCCTCCTGGGCGGCCACGCTC +
Preference number: 6 (lower is better)
Translates to: RARCCARSSSAS*LSRAASWAATL
Trigger: GAGCGTGGCCGCCCAGGAGGCAGCACGGCTGAGGCAGCTAGCGGAGGAGGACCTGGCGCAGCAGCGGGCCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCGCTTCTGCCTCCTCAGCCCGAGCGCGCAGAGCCTaGAGCTCGCCCTCCGCCCCTCCACGCTGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: CASASSARARRA*SSPSAPPRCRS
Trigger: TGAGCGGCAGCGTGGAGGGGCGGAGGGCGAGCTGCAGGCTCTGCGCGCTCGGGCTGAGGAGGCAGAAGCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCCACCTTGCGCTGCCGAGCGGCTTCCTCCTCCGCTaGCAGGCTCCTCTGCACGCGCTCCTCGGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: CHLALPSGFLLR*QAPLHALLGLP
Trigger: CGGGAGGCCGAGGAGCGCGTGCAGAGGAGCCTGGCAGCGGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GCACTGCGCTGTGCCGTCTCCAGGGCCACCTGCACTTaGCGTGCCCGCTCTGCCTCGGCTTGGCGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ALRCAVSRATCT*RARSASAWRSR
Trigger: GCGGCTGCGCCAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGCAGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CGCACTGCGCTGTGCCGTCTCCAGGGCCACCTGCACTaGGCGTGCCCGCTCTGCCTCGGCTTGGCGCAGCCG +
Preference number: 6 (lower is better)
Translates to: RTALCRLQGHLH*ACPLCLGLAQP
Trigger: CGGCTGCGCCAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGCAGTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp CTCCACTTCCGCACTGCGCTGTGCCGTCTCCAGGGCCACCTGCACTaGGCGTGCCCGCTCTGCCTCGGCTTGGCGCAGCCGCCGCTCGGC +
Preference number: 6 (lower is better)
Translates to: LHFRTALCRLQGHLH*ACPLCLGLAQPPLG
Trigger: GCCGAGCGGCGGCTGCGCCAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAAGTGGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TCCTGCTCCGCCAGCTCCCGCTGCCGCACAGCCTGCTCCTCCGCCTaGCCCCGCCGCCGCGCTTCCCGCTCGGCCTCTTCCTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SCSASSRCRTACSSA*PRRRASRSASSFCF
Trigger: GAAGCAGAAGGAAGAGGCCGAGCGGGAAGCGCGGCGGCGGGGCAAGGCGGAGGAGCAGGCTGTGCGGCAGCGGGAGCTGGCGGAGCAGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CGCTGGCGGGCGGCATCCTCCTCTGCCAACTGCCTCTaGCTCTTGGCCTCCTCCGCCAGAGCACGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: RWRAASSSANCL*LLASSARARSR
Trigger: CCGGCTGCGTGCTCTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCCCGCCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CTCTGCCTCGGCCCGCTGGCGGGCGGCATCCTCCTCTaGCAACTGCCTCTGCCTCTTGGCCTCCTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: LCLGPLAGGILL*QLPLPLGLLRQ
Trigger: CTGGCGGAGGAGGCCAAGAGGCAGAGGCAGTTGGCAGAGGAGGATGCCGCCCGCCAGCGGGCCGAGGCAGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CGCAGCTGGGCCAGGCGCTCCTCGATGTCAGCCTTGTaGAGTGCCGCCTGCTCCTCCAGACGCCGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: RSWARRSSMSAL*SAACSSRRRRW
Trigger: CCAGCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGAGCGCCTGGCCCAGCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp TCCTCCTCCGCTAGCTGCCTCAGCCGTGCTGCCTCCTaGGCGGCCACGCTCAACCGTGCCGCTTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: SSSASCLSRAAS*AATLNRAASSA
Trigger: GGCCGAGGAAGCGGCACGGTTGAGCGTGGCCGCCCAGGAGGCAGCACGGCTGAGGCAGCTAGCGGAGGAGGA
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp CCTCCACGGACGGGCCATCGGGTGCATCCCGGCCGTTaGGCAGTGCCTTCGTGGAAGCGGCCTGGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: PPRTGHRVHPGR*AVPSWKRPGWW
Trigger: CCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCCGGGATGCACCCGATGGCCCGTCCGTGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp CAGTGGCATCAAAGCTGCCACGCCGGGAGCCGGCCCTaGAGCCGGTGCGTGAACCAGTGCGTGAGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: QWHQSCHAGSRP*SRCVNQCVSRR
Trigger: CCGCCGGCTCACGCACTGGTTCACGCACCGGCTCCAGGGCCGGCTCCCGGCGTGGCAGCTTTGATGCCACTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp GCCTCCACGGACGGGCCATCGGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAAGCGGCCTGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: ASTDGPSGASRP*GSAFVEAAWVV
Trigger: CACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCCGGGATGCACCCGATGGCCCGTCCGTGGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GCCGCCAACTGCCGCTGCCGGGCCGCCTCCAGTTCCGCCTGCTCCTaGCTGCGCATTGTGTCCTCCGCGTTGCTGCGAATGCGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: AANCRCRAASSSACS*LRIVSSALLRMRPS
Trigger: GCTGGGGCGCATTCGCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGCGGCCCGGCAGCGGCAGTTGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GGGCCTGAGCCCGGCTCATCTCAGCCATGCGCAGCTTaGGGCGCTCGGCCTCCGCGCTCATCTCCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: GPEPGSSQPCAA*GARPPRSSPAA
Trigger: GGCAGCTGGAGATGAGCGCGGAGGCCGAGCGCCTCAAGCTGCGCATGGCTGAGATGAGCCGGGCTCAGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp TTCCGGAAGCGCTGGGCGTCCTCCTCCGCGCGGGCCTaGGCCCGGCTCATCTCAGCCATGCGCAGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: FRKRWASSSARA*ARLISAMRSLR
Trigger: CCTCAAGCTGCGCATGGCTGAGATGAGCCGGGCTCAGGCCCGCGCGGAGGAGGACGCCCAGCGCTTCCGGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CGCAGCCTCCACCTCGGCCAGTCGCTCCCGCTCCTCTaGCCGCTGTTGCTCAGCCAGCCGCTCCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: RSLHLGQSLPLL*PLLLSQPLLLF
Trigger: GAAGAGGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGAGCGGGAGCGACTGGCCGAGGTGGAGGCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ACTTCCGCACTGCGCTGTGCCGTCTCCAGGGCCACCTaGACTTGGCGTGCCCGCTCTGCCTCGGCTTGGCGC +
Preference number: 6 (lower is better)
Translates to: TSALRCAVSRAT*TWRARSASAWR
Trigger: GCGCCAAGCCGAGGCAGAGCGGGCACGCCAAGTGCAGGTGGCCCTGGAGACGGCACAGCGCAGTGCGGAAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CCTTGCTCTGTCTCGGCCCGCAGGCGGATCAGCTCTTaGTCCGCAGCCAGGCGCTGCTGTGCGGTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PCSVSARRRISS*SAARRCCAVPS
Trigger: GGAGGGCACCGCACAGCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTGCGGGCCGAGACAGAGCAAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CTGGGCCAGGCGCTCCTCGATGTCAGCCTTGTGCAGTaGCGCCTGCTCCTCCAGACGCCGCCGCTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: LGQALLDVSLVQ*RLLLQTPPLEG
Trigger: GCCTTCCAGCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGAGCGCCTGGCCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCCTCCTGGGCCAGCTGCAGCTGCCTGGCCGACTCCTaGTCTGCCCGCTCTCGCAGGCGCCGTGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: ASWASCSCLADS*SARSRRRRASS
Trigger: TGAAGAAGCACGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCCAGGCAGCTGCAGCTGGCCCAGGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GGACGGGCCATCGGGTGCATCCCGGCCGTTGGGCAGTaGCTTCGTGGAAGCGGCCTGGGTGGTGGCGATCTC +
Preference number: 6 (lower is better)
Translates to: GRAIGCIPAVGQ*LRGSGLGGGDL
Trigger: GAGATCGCCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCCGGGATGCACCCGATGGCCCGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp CGCAGCCTCCACCTCGGCCAGTCGCTCCCGCTCCTCTGCCCGCTGTaGCTCAGCCAGCCGCTCCTCCTCTTCCATGCGGCGAAGGGTCTC +
Preference number: 6 (lower is better)
Translates to: RSLHLGQSLPLLCPL*LSQPLLLFHAAKGL
Trigger: GAGACCCTTCGCCGCATGGAAGAGGAGGAGCGGCTGGCTGAGCAACAGCGGGCAGAGGAGCGGGAGCGACTGGCCGAGGTGGAGGCTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp CTGCTGCTCACCTTGCTCTGTCTCGGCCCGCAGGCGGATCAGCTCTaGCTCCGCAGCCAGGCGCTGCTGTGCGGTGCCCTCCGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LLLTLLCLGPQADQL*LRSQALLCGALRQL
Trigger: CAGCTGGCGGAGGGCACCGCACAGCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTGCGGGCCGAGACAGAGCAAGGTGAGCAGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GCCGCTGCCGGGCCGCCTCCAGTTCCGCCTGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGCGAATGCGCCCCAGCTCCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: AAAGPPPVPPAPCCA*CPPRCCECAPAPAP
Trigger: TGGAGCTGGAGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGCGGCCCGGCAGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TCGGGTTCAGCCTCCACGGACGGGCCATCGGGTGCATCCCGGCCGTaGGGCAGTGCCTTCGTGGAAGCGGCCTGGGTGGTGGCGATCTCA +
Preference number: 6 (lower is better)
Translates to: SGSASTDGPSGASRP*GSAFVEAAWVVAIS
Trigger: TGAGATCGCCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCCGGGATGCACCCGATGGCCCGTCCGTGGAGGCTGAACCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCCTTAGCCTGGGCGTGTGCCTCAGCTAGCTGCCGCTaGTTCTCCAGCGCAGCCTCCACCTCGGCCAGTCGC +
Preference number: 6 (lower is better)
Translates to: ALAWACASASCR*FSSAASTSASR
Trigger: GCGACTGGCCGAGGTGGAGGCTGCGCTGGAGAAGCAGCGGCAGCTAGCTGAGGCACACGCCCAGGCTAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp AGCTCCTGGCGCTTCTGCGTGGCTGCGGTGGCCTCGTaGTGTAGCCGGGCCAGCTCTTCCTCCAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSWRFCVAAVAS*CSRASSSSSSC
Trigger: GCAGCTGCTGGAGGAAGAGCTGGCCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGAAGCGCCAGGAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCTGCCGGGCCGCCTCCAGTTCCGCCTGCTCCTTGCTaGGCATTGTGTCCTCCGCGTTGCTGCGAATGCGCC +
Preference number: 6 (lower is better)
Translates to: AAGPPPVPPAPC*ALCPPRCCECA
Trigger: GGCGCATTCGCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGCGGCCCGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCCGCTGCCGGGCCGCCTCCAGTTCCGCCTGCTCCTTaGTGCGCATTGTGTCCTCCGCGTTGCTGCGAATGC +
Preference number: 6 (lower is better)
Translates to: AAAGPPPVPPAP*CALCPPRCCEC
Trigger: GCATTCGCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGCGGCCCGGCAGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCCAACTGCCGCTGCCGGGCCGCCTCCAGTTCCGCCTaGTCCTTGCTGCGCATTGTGTCCTCCGCGTTGCTG +
Preference number: 6 (lower is better)
Translates to: ANCRCRAASSSA*SLLRIVSSALL
Trigger: CAGCAACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGCGGCCCGGCAGCGGCAGTTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp AGCCGCCGGGCCTGCTCCTGGGCAAGCTCCTTCTGCTaGTGCAGCAGCTCAGCCTCGGCCTTGAGCCTCGTG +
Preference number: 6 (lower is better)
Translates to: SRRACSWASSFC*CSSSASALSLV
Trigger: CACGAGGCTCAAGGCCGAGGCTGAGCTGCTGCAGCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GGGCACGTGGCCCCGCACCGGGTGGGCAGGGTTGCGTaGCTTCAACTGCACAATAGCCTTGGCCCGCTTGGC +
Preference number: 6 (lower is better)
Translates to: GHVAPHRVGRVA*LQLHNSLGPLG
Trigger: GCCAAGCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGGTGCGGGGCCACGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp ACCTTGCTCTGTCTCGGCCCGCAGGCGGATCAGCTCTaGCTCCGCAGCCAGGCGCTGCTGTGCGGTGCCCTC +
Preference number: 6 (lower is better)
Translates to: TLLCLGPQADQL*LRSQALLCGAL
Trigger: GAGGGCACCGCACAGCAGCGCCTGGCTGCGGAGCAAGAGCTGATCCGCCTGCGGGCCGAGACAGAGCAAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp CACACGGCTATCAGGGGCACGTGGCCCCGCACCGGGTGGGCAGGGTaGCGTGGCTTCAACTGCACAATAGCCTTGGCCCGCTTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: HTAIRGTWPRTGWAG*RGFNCTIALARLAR
Trigger: CCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGGTGCGGGGCCACGTGCCCCTGATAGCCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 72 bp CGGTGCAGGCTTGGGCCTCCAGCAGCCGCTGGCCGGTaGTGTTGTCTACCAGGTTGCGGTGCATGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: RCRLGPPAAAGR*CCLPGCGAWPP
Trigger: CGGAGGCCATGCACCGCAACCTGGTAGACAACATCACCGGCCAGCGGCTGCTGGAGGCCCAAGCCTGCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CCCCGCACCGGGTGGGCAGGGTTGCGTGGCTTCAACTaGACAATAGCCTTGGCCCGCTTGGCCAGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: PRTGWAGLRGFN*TIALARLARPE
Trigger: CTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGGTGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp AGGTGCTGCAGCTCCTCTTGGATGCTGCGCTTCTGCTaGTGTGCGTCCACTGCTGCCTCCTCGCGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: RCCSSSWMLRFC*CASTAASSRRA
Trigger: GGCGCGGCGCGAGGAGGCAGCAGTGGACGCACAGCAGCAGAAGCGCAGCATCCAAGAGGAGCTGCAGCACCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ACCTTAGCCAGTTCAGCCTCCAGCTCCTGGCGCTTCTaGGTGGCTGCGGTGGCCTCGTGCTGTAGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: TLASSASSSWRF*VAAVASCCSRA
Trigger: GGCCCGGCTACAGCACGAGGCCACCGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGAACTGGCTAAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CTCCTCCAGACGCCGCCGCTGGAAGGCCTCGTCTTCTaGCAGGCGCCTCAGGCGCTCATTCTCGGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LLQTPPLEGLVF*QAPQALILGLL
Trigger: AAGGAGGCCGAGAATGAGCGCCTGAGGCGCCTGGCAGAAGACGAGGCCTTCCAGCGGCGGCGTCTGGAGGAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp AGGCGCTCCTCGATGTCAGCCTTGTGCAGTGCCGCCTaGTCCTCCAGACGCCGCCGCTGGAAGGCCTCGTCT +
Preference number: 6 (lower is better)
Translates to: RRSSMSALCSAA*SSRRRRWKASS
Trigger: AGACGAGGCCTTCCAGCGGCGGCGTCTGGAGGAGCAGGCGGCACTGCACAAGGCTGACATCGAGGAGCGCCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CGCCGCTGTCGCAGGGTGTCCTCCACCAAGCCCTTCTaGCGCTCCAGCTCGCTCTCTGATGCCTTGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RRCRRVSSTKPF*RSSSLSDALRS
Trigger: GCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGAGGACACCCTGCGACAGCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TTGAGTCGCTCGACCTCCTCCAGTGCCACCTTGCGCTaGCGAGCGGCTTCCTCCTCCGCTGCCAGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LSRSTSSSATLR*RAASSSAARLL
Trigger: GAGGAGCCTGGCAGCGGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CTGGGCCAGCTGCAGCTGCCTGGCCGACTCCTGCTCTaGCCGCTCTCGCAGGCGCCGTGCTTCTTCAACCTT +
Preference number: 6 (lower is better)
Translates to: LGQLQLPGRLLL*PLSQAPCFFNL
Trigger: AAGGTTGAAGAAGCACGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCCAGGCAGCTGCAGCTGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCTGCACCACAAAGGCGTGTGCCTTCTCCTCCGCCTaGAGCCGTTTCTGGGCGGCCTCCTGGGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: CCTTKACAFSSA*SRFWAASWASC
Trigger: GCAGCTGGCCCAGGAGGCCGCCCAGAAACGGCTGCAGGCGGAGGAGAAGGCACACGCCTTTGTGGTGCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp AGCTTGAGGCGCTCGGCCTCCGCGCTCATCTCCAGCTaGCGCTGCCGCTCGGCCTCCAGAGTCCTCTGGAAA +
Preference number: 6 (lower is better)
Translates to: SLRRSASALISS*RCRSASRVLWK
Trigger: TTTCCAGAGGACTCTGGAGGCCGAGCGGCAGCGGCAGCTGGAGATGAGCGCGGAGGCCGAGCGCCTCAAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCCTGTTGCTCAGCGATGCGCTGGGCGCACTCCCGTaGGGGGTCCTTATCCAGTGGCAGCCGCAGACGGTG +
Preference number: 6 (lower is better)
Translates to: CLLLSDALGALP*GVLIQWQPQTV
Trigger: CACCGTCTGCGGCTGCCACTGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165210.8
CDS GCA 72 bp CCTCCACCTCAGCCTGCGCTGCCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTGCGGGGTCCTTATCCA +
Preference number: 6 (lower is better)
Translates to: PPPQPALPVAQR*AGRTPVRGPYP
Trigger: TGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGGCAGCGCAGGCTGAGGTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165210.8
CDS CCA 72 bp GCAGCCTGGAAGGACTCCACCGTGGGCCGGGCAGGATaGTCTTCCCGCAGCAGCCTGTCCCCTGTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: AAWKDSTVGRAG*SSRSSLSPVFW
Trigger: CCAGAACACAGGGGACAGGCTGCTGCGGGAAGACCATCCTGCCCGGCCCACGGTGGAGTCCTTCCAGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp GCGCTGGGCGCACTCCCGTGCGGGGTCCTTATCCAGTaGCAGCCGCAGACGGTGCACAGTCCGAGTCTCACA +
Preference number: 6 (lower is better)
Translates to: ALGALPCGVLIQ*QPQTVHSPSLT
Trigger: TGTGAGACTCGGACTGTGCACCGTCTGCGGCTGCCACTGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GGCCGTTGGGCAGTGCCTTCGTGGAAGCGGCCTGGGTaGTGGCGATCTCAGAGTGAGCCAAGGCAGCGCGGT +
Preference number: 6 (lower is better)
Translates to: GRWAVPSWKRPG*WRSQSEPRQRG
Trigger: ACCGCGCTGCCTTGGCTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp ACCTCAGCCTGCGCTGCCTGTTGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGGTCCTTATCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: TSACAACCSAMR*AHSRAGSLSSG
Trigger: GCCACTGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGGCAGCGCAGGCTGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165210.8
CDS CAA 72 bp ATCAGGGGCACGTGGCCCCGCACCGGGTGGGCAGGGTaGCGTGGCTTCAACTGCACAATAGCCTTGGCCCGC +
Preference number: 6 (lower is better)
Translates to: IRGTWPRTGWAG*RGFNCTIALAR
Trigger: GCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGGTGCGGGGCCACGTGCCCCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp GGGCCGCCTCCAGTTCCGCCTGCTCCTTGCTGCGCATaGTGTCCTCCGCGTTGCTGCGAATGCGCCCCAGCT +
Preference number: 6 (lower is better)
Translates to: GPPPVPPAPCCA*CPPRCCECAPA
Trigger: AGCTGGGGCGCATTCGCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TGCCGCTGCCGGGCCGCCTCCAGTTCCGCCTGCTCCTaGCTGCGCATTGTGTCCTCCGCGTTGCTGCGAATG +
Preference number: 6 (lower is better)
Translates to: CRCRAASSSACS*LRIVSSALLRM
Trigger: CATTCGCAGCAACGCGGAGGACACAATGCGCAGCAAGGAGCAGGCGGAACTGGAGGCGGCCCGGCAGCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TTGGCCTTGAGTCGCTCGACCTCCTCCAGTGCCACCTaGCGCTGCCGAGCGGCTTCCTCCTCCGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: LALSRSTSSSAT*RCRAASSSAAR
Trigger: CCTGGCAGCGGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TGCTCTGCCCGCTCTCGCAGGCGCCGTGCTTCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCCAGTGCCACCTTGCGCTGCCGAGCG +
Preference number: 6 (lower is better)
Translates to: CSARSRRRRASSTLA*SRSTSSSATLRCRA
Trigger: CGCTCGGCAGCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGAAGCACGGCGCCTGCGAGAGCGGGCAGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp CTCCACCAAGCCCTTCTGCCGCTCCAGCTCGCTCTCTaGTGCCTTGCGCAGCTGGGCCAGGCGCTCCTCGAT +
Preference number: 6 (lower is better)
Translates to: LHQALLPLQLAL*CLAQLGQALLD
Trigger: ATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp TTCGTGGAAGCGGCCTGGGTGGTGGCGATCTCAGAGTaGGCCAAGGCAGCGCGGTGCTCTTCCTCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: FVEAAWVVAISE*AKAARCSSSRR
Trigger: GCGCCTGGAGGAAGAGCACCGCGCTGCCTTGGCTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCACGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp CGTCCACAGTCAGCCTGGCGCTGGTGGCAGGGTCGATaGTATGCCCAGTGCCAGCCTGGGCCTCCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: RPQSAWRWWQGR*YAQCQPGPPAR
Trigger: CCTTGCTGGAGGCCCAGGCTGGCACTGGGCATATCATCGACCCTGCCACCAGCGCCAGGCTGACTGTGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GCATCCTCCCTTTCTCGCGGGGCAGGCGCACACTCCTaGTTACGTCCCGCTCCCTCGGCAGGCTGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: ASSLSRGAGAHS*LRPAPSAGCLL
Trigger: CAGGAGACAGCCTGCCGAGGGAGCGGGACGTAATCAGGAGTGTGCGCCTGCCCCGCGAGAAAGGGAGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089610.10
ENSMUST00000166428.8
ENSMUST00000167754.8
CDS GCA 72 bp TCCACTGCTGCCTCCTCGCGCCGCGCCACCTCCTCCTaGATGCGCCGCTGCAGTTCTTGTGCTTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: STAASSRRATSS*MRRCSSCASSS
Trigger: AGAGCTGGAAGCACAAGAACTGCAGCGGCGCATGCAGGAGGAGGTGGCGCGGCGCGAGGAGGCAGCAGTGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CGCAGAGCCTGCAGCTCGCCCTCCGCCCCTCCACGCTaGCGCTCAGTTGTCTCCAGCTGCAGACGTACTACA +
Preference number: 6 (lower is better)
Translates to: RRACSSPSAPPR*RSVVSSCRRTT
Trigger: TGTAGTACGTCTGCAGCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGAGGGCGAGCTGCAGGCTCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp AGCCCTTCTGCCGCTCCAGCTCGCTCTCTGATGCCTTaGGCAGCTGGGCCAGGCGCTCCTCGATGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: SPSAAPARSLMP*AAGPGAPRCQP
Trigger: AGGCTGACATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCAGAAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GGCCGACTCCTGCTCTGCCCGCTCTCGCAGGCGCCGTaGTTCTTCAACCTTGGCCTTGAGTCGCTCGACCTC +
Preference number: 6 (lower is better)
Translates to: GRLLLCPLSQAP*FFNLGLESLDL
Trigger: GAGGTCGAGCGACTCAAGGCCAAGGTTGAAGAAGCACGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCCATTTGCTCCTTGTCCTCCTGCAGCCGCCGGGCCTaGTCCTGGGCAAGCTCCTTCTGCTGCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: AICSLSSCSRRA*SWASSFCCCSS
Trigger: GCTGCTGCAGCAGCAGAAGGAGCTTGCCCAGGAGCAGGCCCGGCGGCTGCAGGAGGACAAGGAGCAAATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CAGGGGTTTCAGGTGCCCCCTCCTCACGCTCCTTCCTaGGATAGACCTGCCGCTCCTCACGGGCAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: QGFQVPPPHAPS*DRPAAPHGQGP
Trigger: AGGACCCTGCCCGTGAGGAGCGGCAGGTCTATCGCAGGAAGGAGCGTGAGGAGGGGGCACCTGAAACCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
ENSMUST00000171634.8
CDS CCA 72 bp GCTCCCGGTACTCCTGCCAACGAAGCTGCAGCTCATTaGCCCTCACTCCGTCCTGTGCACCAGGCACGCGGG +
Preference number: 6 (lower is better)
Translates to: APGTPANEAAAH*PSLRPVHQARG
Trigger: CCCGCGTGCCTGGTGCACAGGACGGAGTGAGGGCCAATGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp AGCTCTGGGCGCCTCTGTGTACTCTGCAGGGTCACCTaGGTCACAGGGGCACCCACTCCTGCCTTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: SSGRLCVLCRVT*VTGAPTPAFSR
Trigger: CCGGCTGAAGGCAGGAGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCGCCCAGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp CACACGGCTATCAGGGGCACGTGGCCCCGCACCGGGTaGGCAGGGTTGCGTGGCTTCAACTGCACAATAGCC +
Preference number: 6 (lower is better)
Translates to: HTAIRGTWPRTG*AGLRGFNCTIA
Trigger: GGCTATTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGGTGCGGGGCCACGTGCCCCTGATAGCCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp CTGCGTTCTGCAGCCTCCACCTGCTGGGCCTTGGCCTaGATCTCTGCCTCCGAGCTCTGCCTCAGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LRSAASTCWALA*ISASELCLRCC
Trigger: GCAGCACCTGAGGCAGAGCTCGGAGGCAGAGATCCAGGCCAAGGCCCAGCAGGTGGAGGCTGCAGAACGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp TCTGCCCGGACCTTAGCCAGTTCAGCCTCCAGCTCCTaGCGCTTCTGCGTGGCTGCGGTGGCCTCGTGCTGT +
Preference number: 6 (lower is better)
Translates to: SARTLASSASSS*RFCVAAVASCC
Trigger: ACAGCACGAGGCCACCGCAGCCACGCAGAAGCGCCAGGAGCTGGAGGCTGAACTGGCTAAGGTCCGGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp CATCGGGTGCATCCCGGCCGTTGGGCAGTGCCTTCGTaGAAGCGGCCTGGGTGGTGGCGATCTCAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: HRVHPGRWAVPS*KRPGWWRSQSE
Trigger: CTCACTCTGAGATCGCCACCACCCAGGCCGCTTCCACGAAGGCACTGCCCAACGGCCGGGATGCACCCGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GCGGGCACGAGGGCACGGAGGCCCTCAAAGCAGAGCTaGCCCTTCCGCTCGTGTTCCTCCACCACTGTGATG +
Preference number: 6 (lower is better)
Translates to: AGTRARRPSKQS*PFRSCSSTTVM
Trigger: CATCACAGTGGTGGAGGAACACGAGCGGAAGGGCCAGCTCTGCTTTGAGGGCCTCCGTGCCCTCGTGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp AAGCCCTTCTGCCGCTCCAGCTCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGCTCCTCGATGTCAGCC +
Preference number: 6 (lower is better)
Translates to: KPFCRSSSLSDA*RSWARRSSMSA
Trigger: GGCTGACATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCAGAAGGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TGCCCTGCTTCTTCCAGCCACACACCGGCGATGACATaGGTACCCCGCAGGGCCTGCCTCACGCTGTCCGCC +
Preference number: 6 (lower is better)
Translates to: CPASSSHTPAMT*VPRRACLTLSA
Trigger: GGCGGACAGCGTGAGGCAGGCCCTGCGGGGTACCAATGTCATCGCCGGTGTGTGGCTGGAAGAAGCAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CACGGGCAGGGTCCTCAGCTGGCAGAGGCCCCCTCTTaGGTGGGCAGCCTAGGGGACCTTGCATGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: HGQGPQLAEAPS*VGSLGDLAWSA
Trigger: TGCAGACCATGCAAGGTCCCCTAGGCTGCCCACCAAAGAGGGGGCCTCTGCCAGCTGAGGACCCTGCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
ENSMUST00000171634.8
CDS CAA 90 bp GGCTGCTGTGCCTCGGCCTGGGCCCGCAGCTTCTTTAGTGAGGCCTaGGTGGCTTCAAGCTCTTGGAGAGTGGCAGGCACAGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GCCASAWARSFFSEA*VASSSWRVAGTAWA
Trigger: GGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACCAAGGCCTCACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TCTTCAACCTTGGCCTTGAGTCGCTCGACCTCCTCCAGTGCCACCTaGCGCTGCCGAGCGGCTTCCTCCTCCGCTGCCAGGCTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: SSTLALSRSTSSSAT*RCRAASSSAARLLC
Trigger: GCAGAGGAGCCTGGCAGCGGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GACTCCTGCTCTGCCCGCTCTCGCAGGCGCCGTGCTTCTTCAACCTaGGCCTTGAGTCGCTCGACCTCCTCCAGTGCCACCTTGCGCTGC +
Preference number: 6 (lower is better)
Translates to: DSCSARSRRRRASST*ALSRSTSSSATLRC
Trigger: GCAGCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGAAGCACGGCGCCTGCGAGAGCGGGCAGAGCAGGAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CACATCAGCTCCTTGGTAGCTGCCGCCACAAACCCGTaGAAGCTCTCCAGGGACCGGAGGCGGGCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: HISSLVAAATNP*KLSRDRRRALE
Trigger: CTCCAAGGCCCGCCTCCGGTCCCTGGAGAGCTTGCACGGGTTTGTGGCGGCAGCTACCAAGGAGCTGATGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp TTTCTGTTGCTCAGCGATGCGCTGGGCGCACTCCCGTaGGGGGTCCTTATCCAGTGGCAGCCGCAGACGGTG +
Preference number: 6 (lower is better)
Translates to: FLLLSDALGALP*GVLIQWQPQTV
Trigger: CACCGTCTGCGGCTGCCACTGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CCTCCACCTCAGCCTGCGCTTTCTGTTGCTCAGCGATaGGCTGGGCGCACTCCCGTGCGGGGTCCTTATCCA +
Preference number: 6 (lower is better)
Translates to: PPPQPALSVAQR*AGRTPVRGPYP
Trigger: TGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGCTGAGGTGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ACGGCCTGGATCTGCTCTTGCCGCCTCTTGGCATCCTaGAGCCAGGCGCTCAGAGGATCCGCGCTCTCACGA +
Preference number: 6 (lower is better)
Translates to: TAWICSCRLLAS*SQALRGSALSR
Trigger: TCGTGAGAGCGCGGATCCTCTGAGCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CGCTCGGCCTCCTCCCGCAGCTGGGCCACTGTTACATaGTCCTCCTGCAGAGTGCGCTCCAATTGTGCGGTC +
Preference number: 6 (lower is better)
Translates to: RSASSRSWATVT*SSCRVRSNCAV
Trigger: GACCGCACAATTGGAGCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCAGCTGCGGGAGGAGGCCGAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TTCAACCTTGGCCTTGAGTCGCTCGACCTCCTCCAGTaGCACCTTGCGCTGCCGAGCGGCTTCCTCCTCCGC +
Preference number: 6 (lower is better)
Translates to: FNLGLESLDLLQ*HLALPSGFLLR
Trigger: GCGGAGGAGGAAGCCGCTCGGCAGCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CCGCTGCGTGAGCTCAGCCACCGTGGTGTGACCCTGTaGCAAACGCTGCAGTTCCTCCTGGCTCAGGATGCC +
Preference number: 6 (lower is better)
Translates to: PLRELSHRGVTL*QTLQFLLAQDA
Trigger: GGCATCCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGAGCTCACGCAGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CCAGAGGGAGGTGGAAACCCAGGCGGGGGTCCACAATaGCTCCTGTGGCTAGCTGCGCATCCAGCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: PEGGGNPGGGPQ*LLWLAAHPAAS
Trigger: TGAGGCTGCTGGATGCGCAGCTAGCCACAGGAGGCATTGTGGACCCCCGCCTGGGTTTCCACCTCCCTCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp ACCTCAGCCTGCGCTTTCTGTTGCTCAGCGATGCGCTaGGCGCACTCCCGTGCGGGGTCCTTATCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: TSACAFCCSAMR*AHSRAGSLSSG
Trigger: GCCACTGGATAAGGACCCCGCACGGGAGTGCGCCCAGCGCATCGCTGAGCAACAGAAAGCGCAGGCTGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp TGCCGCTCCAGCTCGCTCTCTGATGCCTTGCGCAGCTaGGCCAGGCGCTCCTCGATGTCAGCCTTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: CRSSSLSDALRS*ARRSSMSALCS
Trigger: ACTGCACAAGGCTGACATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GTCAGCTTGCGGGCATCAGAGAGCAGCAGCAGCATCTaGCCGCTGGGGTCATCACGGCGGCAACGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: VSLRASESSSSI*PLGSSRRQRLS
Trigger: GCTCAAGCGTTGCCGCCGTGATGACCCCAGCGGCCAGATGCTGCTGCTGCTCTCTGATGCCCGCAAGCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GCACGCATGACCTGTAGATTGGTGACGCCGGGCACATaGGGATGCAGGCTGCGGGGTCGCCGGTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: ARMTCRLVTPGT*GCRLRGRRSFL
Trigger: CAAGAAGGACCGGCGACCCCGCAGCCTGCATCCCCATGTGCCCGGCGTCACCAATCTACAGGTCATGCGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
ENSMUST00000171634.8
CDS CCA 72 bp GGTGGGCAGCCTAGGGGACCTTGCATGGTCTGCACATaGGGGGAGCGACGACGTGCAGGTATCACCATGGCG +
Preference number: 6 (lower is better)
Translates to: GGQPRGPCMVCT*GERRRAGITMA
Trigger: CGCCATGGTGATACCTGCACGTCGTCGCTCCCCCCATGTGCAGACCATGCAAGGTCCCCTAGGCTGCCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
ENSMUST00000171634.8
CDS CAA 72 bp AGCTCCCGGTACTCCTGCCAACGAAGCTGCAGCTCATaGGCCCTCACTCCGTCCTGTGCACCAGGCACGCGG +
Preference number: 6 (lower is better)
Translates to: SSRYSCQRSCSS*ALTPSCAPGTR
Trigger: CCGCGTGCCTGGTGCACAGGACGGAGTGAGGGCCAATGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp CGCTCTCGCAGGCGCCGTGCTTCTTCAACCTTGGCCTaGAGTCGCTCGACCTCCTCCAGTGCCACCTTGCGC +
Preference number: 6 (lower is better)
Translates to: RSRRRRASSTLA*SRSTSSSATLR
Trigger: GCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGAAGCACGGCGCCTGCGAGAGCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TCTGCCCGCTCTCGCAGGCGCCGTGCTTCTTCAACCTaGGCCTTGAGTCGCTCGACCTCCTCCAGTGCCACC +
Preference number: 6 (lower is better)
Translates to: SARSRRRRASST*ALSRSTSSSAT
Trigger: GGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGAAGCACGGCGCCTGCGAGAGCGGGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TCGCGCAGCCTGACAGTTGGCTATTGGCACGGCCTGGATCTGCTCTaGCCGCCTCTTGGCATCCTGCAGCCAGGCGCTCAGAGGATCCGC +
Preference number: 6 (lower is better)
Translates to: SRSLTVGYWHGLDLL*PPLGILQPGAQRIR
Trigger: GCGGATCCTCTGAGCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGCCAACTGTCAGGCTGCGCGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TCCTCCACCAAGCCCTTCTGCCGCTCCAGCTCGCTCTCTGATGCCTaGCGCAGCTGGGCCAGGCGCTCCTCGATGTCAGCCTTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: SSTKPFCRSSSLSDA*RSWARRSSMSALCS
Trigger: ACTGCACAAGGCTGACATCGAGGAGCGCCTGGCCCAGCTGCGCAAGGCATCAGAGAGCGAGCTGGAGCGGCAGAAGGGCTTGGTGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GGGCTCCGACAGCTGGTCGTGCGTGTCCTTATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGGGAGGTGGAAACCCAGGCGGGGGTC +
Preference number: 6 (lower is better)
Translates to: GLRQLVVRVLIEVAA*VSHLQREVETQAGV
Trigger: GACCCCCGCCTGGGTTTCCACCTCCCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAATAAGGACACGCACGACCAGCTGTCGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GACATCACGCAGCTTCTGGGCTGTGCGGGCATCCACAGTGCCACGTaGCAGAGCTTCGTCGAGAGACACACGGCCGGGCGTGTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: DITQLLGCAGIHSAT*QSFVERHTAGRVRL
Trigger: GAGCCTGACACGCCCGGCCGTGTGTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GCTCTCGCAGGCGCCGTGCTTCTTCAACCTTGGCCTTaGGTCGCTCGACCTCCTCCAGTGCCACCTTGCGCT +
Preference number: 6 (lower is better)
Translates to: ALAGAVLLQPWP*VARPPPVPPCA
Trigger: AGCGCAAGGTGGCACTGGAGGAGGTCGAGCGACTCAAGGCCAAGGTTGAAGAAGCACGGCGCCTGCGAGAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GCTTCTGCCCTGCTTCTTCCAGCCACACACCGGCGATaGCATTGGTACCCCGCAGGGCCTGCCTCACGCTGT +
Preference number: 6 (lower is better)
Translates to: ASALLLPATHRR*HWYPAGPASRC
Trigger: ACAGCGTGAGGCAGGCCCTGCGGGGTACCAATGTCATCGCCGGTGTGTGGCTGGAAGAAGCAGGGCAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp AACCAGTGCGTGAGCCGGCGGTCGAGCCAGAGCCACTaGCGCTGTACGGGCTGTAGTAGCCCTTGCTGGACT +
Preference number: 6 (lower is better)
Translates to: NQCVSRRSSQSH*RCTGCSSPCWT
Trigger: AGTCCAGCAAGGGCTACTACAGCCCGTACAGCGTCAGTGGCTCTGGCTCGACCGCCGGCTCACGCACTGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GTGGAGTCCTCTAGCTCTGGGCGCCTCTGTGTACTCTaGAGGGTCACCTGGGTCACAGGGGCACCCACTCCT +
Preference number: 6 (lower is better)
Translates to: VESSSSGRLCVL*RVTWVTGAPTP
Trigger: AGGAGTGGGTGCCCCTGTGACCCAGGTGACCCTGCAGAGTACACAGAGGCGCCCAGAGCTAGAGGACTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp TCTCGCCAGCGCTCAACTTCTACGTCCCGCTCACCATaGCGCTGCTGTAGCCGCTCACCAACCTCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: SRQRSTSTSRSP*RCCSRSPTSCA
Trigger: GGCACAGGAGGTTGGTGAGCGGCTACAGCAGCGGCATGGTGAGCGGGACGTAGAAGTTGAGCGCTGGCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCAGCCTTCACACGCAGGGCCAGCTCTGCCTCTGCCTaGCGTTTGCGCTGGCTCTCATCCTGCACCTGCCTT +
Preference number: 6 (lower is better)
Translates to: SAFTRRASSASA*RLRWLSSCTCL
Trigger: AAGGCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGTGTGAAGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp AGCTTCAGCCTTCACACGCAGGGCCAGCTCTGCCTCTaGCTGCCGTTTGCGCTGGCTCTCATCCTGCACCTG +
Preference number: 6 (lower is better)
Translates to: SFSLHTQGQLCL*LPFALALILHL
Trigger: CAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGTGTGAAGGCTGAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCCTCAGCTTCAGCCTTCACACGCAGGGCCAGCTCTaGCTCTGCCTGCCGTTTGCGCTGGCTCTCATCCTG +
Preference number: 6 (lower is better)
Translates to: CLSFSLHTQGQL*LCLPFALALIL
Trigger: CAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGTGTGAAGGCTGAAGCTGAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GGCTCGCGCCTTGCTGGCCAGAAGTACCTCCATCTCTaGCCGGACCTTAGCCAGTTCAGCCTCCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: GSRLAGQKYLHL*PDLSQFSLQLL
Trigger: CAGGAGCTGGAGGCTGAACTGGCTAAGGTCCGGGCAGAGATGGAGGTACTTCTGGCCAGCAAGGCGCGAGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CGGACAGAGAAGAGCTCCTCCTCTACCTGGCTGCGCTaGCGGGCTGCCTCTGTTACCTCGGCCTTTAGTCGC +
Preference number: 6 (lower is better)
Translates to: RTEKSSSSTWLR*RAASVTSAFSR
Trigger: GCGACTAAAGGCCGAGGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCTCTTCTCTGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCGTCCTGGAAGAGCTGCTCCAGCTTGGCCTTCTCCTaGTCGATGAAGCGCTCGCGCTGCAGCAGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SSWKSCSSLAFS*SMKRSRCSRLS
Trigger: GGACAGCCTGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTTCCAGGACGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ATGACCTGTAGATTGGTGACGCCGGGCACATGGGGATaGAGGCTGCGGGGTCGCCGGTCCTTCTTGGCAACC +
Preference number: 6 (lower is better)
Translates to: MTCRLVTPGTWG*RLRGRRSFLAT
Trigger: GGTTGCCAAGAAGGACCGGCGACCCCGCAGCCTGCATCCCCATGTGCCCGGCGTCACCAATCTACAGGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000073418.13
ENSMUST00000076442.12
ENSMUST00000171634.8
CDS CCA 72 bp TGCGCCTCCAGTCTAGCGACAGCTTCCTGGGCCTCCTaGTTGGGCGGCGGCACAAGAAAGCACACAGAAGGC +
Preference number: 6 (lower is better)
Translates to: CASSLATASWAS*LGGGTRKHTEG
Trigger: GCCTTCTGTGTGCTTTCTTGTGCCGCCGCCCAACCAGGAGGCCCAGGAAGCTGTCGCTAGACTGGAGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp TCTCCTGGCGCAGCTGTTCTCGCGCAGCCTGACAGTTaGCTATTGGCACGGCCTGGATCTGCTCTTGCCGCC +
Preference number: 6 (lower is better)
Translates to: SPGAAVLAQPDS*LLARPGSALAA
Trigger: GGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGCCAACTGTCAGGCTGCGCGAGAACAGCTGCGCCAGGAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp ATGCGCCGCTGCAGTTCTTGTGCTTCCAGCTCTGCCTaGGCCTTAGCCTGGGCGTGTGCCTCAGCTAGCTGC +
Preference number: 6 (lower is better)
Translates to: MRRCSSCASSSA*ALAWACASASC
Trigger: GCAGCTAGCTGAGGCACACGCCCAGGCTAAGGCCCAGGCAGAGCTGGAAGCACAAGAACTGCAGCGGCGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp ATCTGCACACGGACAGAGAAGAGCTCCTCCTCTACCTaGCTGCGCTGCCGGGCTGCCTCTGTTACCTCGGCC +
Preference number: 6 (lower is better)
Translates to: ICTRTEKSSSST*LRCRAASVTSA
Trigger: GGCCGAGGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCTCTTCTCTGTCCGTGTGCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp AGCTCCGCAATGGCCTCCCTCAGACGCTCGGCATCGTaGTCACTCTGCTGTCGCTGGATCTCCAGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: SSAMASLRRSAS*SLCCRWISSVC
Trigger: GCAGACGCTGGAGATCCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCTGAGGGAGGCCATTGCGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp GTCACAGGGGCACCCACTCCTGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCTACCAGGCGCTCATGC +
Preference number: 6 (lower is better)
Translates to: VTGAPTPAFSRR*YSVRMATRRSC
Trigger: GCATGAGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCTGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp TGGGCAGGGTTGCGTGGCTTCAACTGCACAATAGCCTaGGCCCGCTTGGCCAGGCCTGAGAGGTGCCCCTTG +
Preference number: 6 (lower is better)
Translates to: WAGLRGFNCTIA*ARLARPERCPL
Trigger: CAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGCAACCCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp GCAGCTCGCCCTCCGCCCCTCCACGCTGCCGCTCAGTaGTCTCCAGCTGCAGACGTACTACACGGATCTCTT +
Preference number: 6 (lower is better)
Translates to: AARPPPLHAAAQ*SPAADVLHGSL
Trigger: AAGAGATCCGTGTAGTACGTCTGCAGCTGGAGACAACTGAGCGGCAGCGTGGAGGGGCGGAGGGCGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TCGCTGGTAGAGCGAGACTCTTCCTCGGCTCGCGCCTaGCTGGCCAGAAGTACCTCCATCTCTGCCCGGACC +
Preference number: 6 (lower is better)
Translates to: SLVERDSSSARA*LARSTSISART
Trigger: GGTCCGGGCAGAGATGGAGGTACTTCTGGCCAGCAAGGCGCGAGCCGAGGAAGAGTCTCGCTCTACCAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp CGCACCGGGTGGGCAGGGTTGCGTGGCTTCAACTGCACAATAGCCTaGGCCCGCTTGGCCAGGCCTGAGAGGTGCCCCTTGTACTCATTC +
Preference number: 6 (lower is better)
Translates to: RTGWAGLRGFNCTIA*ARLARPERCPLYSF
Trigger: GAATGAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGCAACCCTGCCCACCCGGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 90 bp GCTTCAGCCTTCACACGCAGGGCCAGCTCTGCCTCTGCCTGCCGTTaGCGCTGGCTCTCATCCTGCACCTGCCTTCGCAAGCGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: ASAFTRRASSASACR*RWLSSCTCLRKRSA
Trigger: AGCTGAACGCTTGCGAAGGCAGGTGCAGGATGAGAGCCAGCGCAAACGGCAGGCAGAGGCAGAGCTGGCCCTGCGTGTGAAGGCTGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GTCACCTGGGTCACAGGGGCACCCACTCCTGCCTTCAGCCGGAGGTaGTACTCAGTGCGGATGGCTACCAGGCGCTCATGCAGACGATAC +
Preference number: 6 (lower is better)
Translates to: VTWVTGAPTPAFSRR*YSVRMATRRSCRRY
Trigger: GTATCGTCTGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGCAGGAGTGGGTGCCCCTGTGACCCAGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 72 bp GCCCGCTCGATCTTGGCCCGAAATTCCTCTATAGACTaGTGCATGCCTCGGTGGCTGCCCAGCTGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: ARSILARNSSID*CMPRWLPSWAS
Trigger: GGAGGCCCAGCTGGGCAGCCACCGAGGCATGCATCAGTCTATAGAGGAATTTCGGGCCAAGATCGAGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 72 bp TGCAGCCGGATATCCTTGAGCTCCGAGATGCATCGCTaGCAGCGGGACTCCTCCTGCTCACCCTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: CSRISLSSEMHR*QRDSSCSPCSR
Trigger: CCTGGAGCAGGGTGAGCAGGAGGAGTCCCGCTGTCAGCGATGCATCTCGGAGCTCAAGGATATCCGGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp AGGGCCTTCTCCTGGCGCAGCTGTTCTCGCGCAGCCTaGCAGTTGGCTATTGGCACGGCCTGGATCTGCTCT +
Preference number: 6 (lower is better)
Translates to: RAFSWRSCSRAA*QLAIGTAWICS
Trigger: AGAGCAGATCCAGGCCGTGCCAATAGCCAACTGTCAGGCTGCGCGAGAACAGCTGCGCCAGGAGAAGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GGAAGAGCTGCTCCAGCTTGGCCTTCTCCTGCTCGATaGAGCGCTCGCGCTGCAGCAGGCTGTCCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: GRAAPAWPSPAR*SARAAAGCPSQ
Trigger: CTGAGAAGGACAGCCTGCTGCAGCGCGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp ACATCTTCCCGCTGCGTGAGCTCAGCCACCGTGGTGTaGCCCTGTGCCAAACGCTGCAGTTCCTCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: TSSRCVSSATVV*PCAKRCSSSWL
Trigger: GAGCCAGGAGGAACTGCAGCGTTTGGCACAGGGTCACACCACGGTGGCTGAGCTCACGCAGCGGGAAGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GGCCCTTCAGGTACCGGTACACATCTTCCCGCTGCGTaGGCTCAGCCACCGTGGTGTGACCCTGTGCCAAAC +
Preference number: 6 (lower is better)
Translates to: GPSGTGTHLPAA*AQPPWCDPVPN
Trigger: GTTTGGCACAGGGTCACACCACGGTGGCTGAGCTCACGCAGCGGGAAGATGTGTACCGGTACCTGAAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp CGCTGGGCTCCGACAGCTGGTCGTGCGTGTCCTTATTaGGGTAGCCGCGTTGGTAAGCCACCTCCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: RWAPTAGRACPY*GSRVGKPPPEG
Trigger: TCCCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAATAAGGACACGCACGACCAGCTGTCGGAGCCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp CCTGATTACGTCCCGCTCCCTCGGCAGGCTGTCTCCTaGGAGGACTTCCAGCAGGGAGATGAGGTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: PDYVPLPRQAVS*EDFQQGDEVVA
Trigger: GGCCACAACCTCATCTCCCTGCTGGAAGTCCTCTCAGGAGACAGCCTGCCGAGGGAGCGGGACGTAATCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089610.10
ENSMUST00000166428.8
ENSMUST00000167754.8
CDS GCA 72 bp TGGAGAGTGGCAGGCACAGCCTGGGCCTCCTTCAGCTaGTCCTCATGGGTTTTAAGCACCTCCTCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: WRVAGTAWASFS*SSWVLSTSSAP
Trigger: GGGGGCTGAGGAGGTGCTTAAAACCCATGAGGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCACTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGTGCGGTCTTCTCTGCAAAGGATGCCCGCTTGCTCTaGAGCTCCACTTCCGCACTGCGCTGTGCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: CAVFSAKDARLL*SSTSALRCAVS
Trigger: GGAGACGGCACAGCGCAGTGCGGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGCAGAGAAGACCGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCACACGGACAGAGAAGAGCTCCTCCTCTACCTGGCTaGGCTGCCGGGCTGCCTCTGTTACCTCGGCCTTTA +
Preference number: 6 (lower is better)
Translates to: AHGQRRAPPLPG*AAGLPLLPRPL
Trigger: TAAAGGCCGAGGTAACAGAGGCAGCCCGGCAGCGCAGCCAGGTAGAGGAGGAGCTCTTCTCTGTCCGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ATGGCCTCCCTCAGACGCTCGGCATCGTGGTCACTCTaGTGTCGCTGGATCTCCAGCGTCTGCACCAACGTC +
Preference number: 6 (lower is better)
Translates to: MASLRRSASWSL*CRWISSVCTNV
Trigger: GACGTTGGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCTGAGGGAGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CCTGTGCCAAACGCTGCAGTTCCTCCTGGCTCAGGATaGCTGCTTCCTGTAGCTGCTGGGCCGGCACCTTCT +
Preference number: 6 (lower is better)
Translates to: PVPNAAVPPGSG*LLPVAAGPAPS
Trigger: AGAAGGTGCCGGCCCAGCAGCTACAGGAAGCAGGCATCCTGAGCCAGGAGGAACTGCAGCGTTTGGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ACAGGGGCACGGAGGCCACTAAAGGACAGTCTCTCCTaGCGCCGAGTCTCCACCTCCTCCACGATGGTGATG +
Preference number: 6 (lower is better)
Translates to: TGARRPLKDSLS*RRVSTSSTMVM
Trigger: CATCACCATCGTGGAGGAGGTGGAGACTCGGCGGCAGGAGAGACTGTCCTTTAGTGGCCTCCGTGCCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCACCTCCCACAGAGACATGGAGGAGCCACCGTGGCTaGCACCACCCGGGATGTCAATCTGCGTCTCCTCGA +
Preference number: 6 (lower is better)
Translates to: SPPTETWRSHRG*HHPGCQSASPR
Trigger: TCGAGGAGACGCAGATTGACATCCCGGGTGGTGGCAGCCACGGTGGCTCCTCCATGTCTCTGTGGGAGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CATCACGCAGCTTCTGGGCTGTGCGGGCATCCACAGTaGCACGTTGCAGAGCTTCGTCGAGAGACACACGGC +
Preference number: 6 (lower is better)
Translates to: HHAASGLCGHPQ*HVAELRRETHG
Trigger: GCCGTGTGTCTCTCGACGAAGCTCTGCAACGTGGCACTGTGGATGCCCGCACAGCCCAGAAGCTGCGTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp AGCAGCCGAATATCCGACTGCAGTAGGGCGTCCGCCTaGTTCAGCTGCTCCTCACACAGCCCAGCCTCCATC +
Preference number: 6 (lower is better)
Translates to: SSRISDCSRASA*FSCSSHSPASI
Trigger: GATGGAGGCTGGGCTGTGTGAGGAGCAGCTGAACCAGGCGGACGCCCTACTGCAGTCGGATATTCGGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp ACCTTCCAGTGGGATGGCTGGGCAGGACCCACCAGCTaGCATTGGTCACCCTTGTGCACAGTCACCTCCACC +
Preference number: 6 (lower is better)
Translates to: TFQWDGWAGPTS*HWSPLCTVTST
Trigger: GGTGGAGGTGACTGTGCACAAGGGTGACCAATGCCAGCTGGTGGGTCCTGCCCAGCCATCCCACTGGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GCTTGCCCAGGGTCAGTTCCAACTCCGAGCGCAGAGTaGGTGCAGCAGGTGACGGCTCTGGCAAGGCTAGAA +
Preference number: 6 (lower is better)
Translates to: ACPGSVPTPSAE*VQQVTALARLE
Trigger: TTCTAGCCTTGCCAGAGCCGTCACCTGCTGCACCCACTCTGCGCTCGGAGTTGGAACTGACCCTGGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp CGGCCTGGGCCCGCAGCTTCTTTAGTGAGGCCTTGGTaGCTTCAAGCTCTTGGAGAGTGGCAGGCACAGCCT +
Preference number: 6 (lower is better)
Translates to: RPGPAASLVRPW*LQALGEWQAQP
Trigger: AGGCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACCAAGGCCTCACTAAAGAAGCTGCGGGCCCAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp CCTCGGCCTGGGCCCGCAGCTTCTTTAGTGAGGCCTTaGTGGCTTCAAGCTCTTGGAGAGTGGCAGGCACAG +
Preference number: 6 (lower is better)
Translates to: PRPGPAASLVRP*WLQALGEWQAQ
Trigger: CTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACCAAGGCCTCACTAAAGAAGCTGCGGGCCCAGGCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp GCCTCGGCCTGGGCCCGCAGCTTCTTTAGTGAGGCCTaGGTGGCTTCAAGCTCTTGGAGAGTGGCAGGCACA +
Preference number: 6 (lower is better)
Translates to: ASAWARSFFSEA*VASSSWRVAGT
Trigger: TGTGCCTGCCACTCTCCAAGAGCTTGAAGCCACCAAGGCCTCACTAAAGAAGCTGCGGGCCCAGGCCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CTGACAGTTGGCTATTGGCACGGCCTGGATCTGCTCTaGCCGCCTCTTGGCATCCTGCAGCCAGGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: LTVGYWHGLDLL*PPLGILQPGAQ
Trigger: CTGAGCGCCTGGCTGCAGGATGCCAAGAGGCGGCAAGAGCAGATCCAGGCCGTGCCAATAGCCAACTGTCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GTACCAGCGCGGTACTGGTCCAGTGCTGAGCGGTCAATGAGGTTCTaGGTGATGGCGTCGTCGATGTCATACTGGCGACCAGAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: VPARYWSSAERSMRF*VMASSMSYWRPERR
Trigger: CCGCCGCTCTGGTCGCCAGTATGACATCGACGACGCCATCACCAAGAACCTCATTGACCGCTCAGCACTGGACCAGTACCGCGCTGGTAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GGGCTAGAACAGCCTGCCAGCGCTCCAGCAACTGAGTaGCACGTTCTCGCCAGCGCTCAACTTCTACGTCCC +
Preference number: 6 (lower is better)
Translates to: GLEQPASAPATE*HVLASAQLLRP
Trigger: GGGACGTAGAAGTTGAGCGCTGGCGAGAACGTGTCACTCAGTTGCTGGAGCGCTGGCAGGCTGTTCTAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp TCACTCCGCAGCCGATCCAGCATGTTCTGCTCTTGCTaGAGCGTCTGCTGCAGCTCCTCCTCTCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SLRSRSSMFCSC*SVCCSSSSRCC
Trigger: GCAGCAGCGAGAGGAGGAGCTGCAGCAGACGCTTCAGCAAGAGCAGAACATGCTGGATCGGCTGCGGAGTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GGTCTCTCTCGACTTCCCCAGCTCGCTGAGCCACCTTaGCTGAGGCCAGCAGCCGAATATCCGACTGCAGTA +
Preference number: 6 (lower is better)
Translates to: GLSRLPQLAEPP*LRPAAEYPTAV
Trigger: TACTGCAGTCGGATATTCGGCTGCTGGCCTCAGGCAAGGTGGCTCAGCGAGCTGGGGAAGTCGAGAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp GTACTACACGGATCTCTTCCTCAATGCGCATCCGGCTaGGTTCTGCAGCCTCCACCTGCTGGGCCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: VLHGSLPQCASG*VLQPPPAGPWP
Trigger: AGGCCAAGGCCCAGCAGGTGGAGGCTGCAGAACGCAGCCGGATGCGCATTGAGGAAGAGATCCGTGTAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ATCTGCTGCTGCTGCCGCTGCTGCTCCTCACGCAGCTaGTTTGCTTTAGCCACCTCGTCCTGGAAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: ICCCCRCCSSRS*FALATSSWKSC
Trigger: GCAGCTCTTCCAGGACGAGGTGGCTAAAGCAAAGCAGCTGCGTGAGGAGCAGCAGCGGCAGCAGCAGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GATGGTCACGGTCCTGCCCTGGAACTTGCCAAACGGTaGAGACACGGTGGCCTTTTCGAAGACGTCACGGGC +
Preference number: 6 (lower is better)
Translates to: DGHGPALELAKR*RHGGLFEDVTG
Trigger: GCCCGTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ACCGGTCAGGTACTGCACCTCCAGGAAACGCTGGCCTaGCTCATAGTACAGCCAGCCCTTCTTCAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: TGQVLHLQETLA*LIVQPALLQGL
Trigger: CAGGCCCTGAAGAAGGGCTGGCTGTACTATGAGGCAGGCCAGCGTTTCCTGGAGGTGCAGTACCTGACCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCAGGGCCTGGGTCTCCTGCAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCCTCTTCCATGCGGCGA +
Preference number: 6 (lower is better)
Translates to: CRAWVSCSICSC*TVCISSSSMRR
Trigger: TCGCCGCATGGAAGAGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165210.8
CDS CCA 72 bp CTCCTGCCTTCAGCCGGAGGTTGTACTCAGTGCGGATaGCTACCAGGCGCTCATGCAGACGATACACCCTCC +
Preference number: 6 (lower is better)
Translates to: LLPSAGGCTQCG*LPGAHADDTPS
Trigger: GGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp CTACCCAGGCCAGCAGGTCTTGCAGGTAGCGCAGTGTaGAGTCCTCTAGCTCTGGGCGCCTCTGTGTACTCT +
Preference number: 6 (lower is better)
Translates to: LPRPAGLAGSAV*SPLALGASVYS
Trigger: AGAGTACACAGAGGCGCCCAGAGCTAGAGGACTCCACACTGCGCTACCTGCAAGACCTGCTGGCCTGGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp ACCCGTGCAAGCTCTCCAGGGACCGGAGGCGGGCCTTaGAGGAGTTCAGCAGCTTTGCATACTGCAGGTCTA +
Preference number: 6 (lower is better)
Translates to: TRASSPGTGGGP*RSSAALHTAGL
Trigger: TAGACCTGCAGTATGCAAAGCTGCTGAACTCCTCCAAGGCCCGCCTCCGGTCCCTGGAGAGCTTGCACGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp CTCAGACGCTCGGCATCGTGGTCACTCTGCTGTCGCTaGATCTCCAGCGTCTGCACCAACGTCACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LRRSASWSLCCR*ISSVCTNVTFS
Trigger: GGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGACCACGATGCCGAGCGTCTGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TTGCCCGTCTCTGGGTCCACAATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAGGATGTCTTCCGTTCC +
Preference number: 6 (lower is better)
Translates to: LPVSGSTITTRR*RTEDLEDVFRS
Trigger: GGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGATTGTGGACCCAGAGACGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GGGGAACTTGCGCTCCTCAAAAGCAGCGGTGTGGTGCCGGATCCATaGCAGCAGCAGCAACACAAGCTCCCGGTACTCCTGCCAACGAAG +
Preference number: 6 (lower is better)
Translates to: GELALLKSSGVVPDP*QQQQHKLPVLLPTK
Trigger: CTTCGTTGGCAGGAGTACCGGGAGCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCACACCGCTGCTTTTGAGGAGCGCAAGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 90 bp TCTTCTGCCAGGCGCCTCAGGCGCTCATTCTCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCCGTCTTGAGCCGTGTGGCCTCACTG +
Preference number: 6 (lower is better)
Translates to: SSARRLRRSFSASFS*SAISASVLSRVASL
Trigger: CAGTGAGGCCACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGAGAATGAGCGCCTGAGGCGCCTGGCAGAAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GACATCTCCTTGCCCGTCTCTGGGTCCACAATCACCACGCGGCGCTaGCGCACTGAGGACTTGGAGGATGTCTTCCGTTCCCGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: DISLPVSGSTITTRR*RTEDLEDVFRSRFF
Trigger: GAAGAAGCGGGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGATTGTGGACCCAGAGACGGGCAAGGAGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GTCTGGGCTAGAACAGCCTGCCAGCGCTCCAGCAACTaGGTGACACGTTCTCGCCAGCGCTCAACTTCTACG +
Preference number: 6 (lower is better)
Translates to: VWARTACQRSSN*VTRSRQRSTST
Trigger: CGTAGAAGTTGAGCGCTGGCGAGAACGTGTCACTCAGTTGCTGGAGCGCTGGCAGGCTGTTCTAGCCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp CGCTGTAGCGCGTGCGCAGATCCACGTACTCCTGGATaGCGCTCTCCGATCCAGACTGAACCTTGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: RCSACADPRTPG*RSPIQTEPWAS
Trigger: AGAAGCCCAAGGTTCAGTCTGGATCGGAGAGCGTCATCCAGGAGTACGTGGATCTGCGCACGCGCTACAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp CTCTGGGTCCACAATCACCACGCGGCGCTTGCGCACTaGGGACTTGGAGGATGTCTTCCGTTCCCGCTTCTT +
Preference number: 6 (lower is better)
Translates to: LWVHNHHAALAH*GLGGCLPFPLL
Trigger: AAGAAGCGGGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGATTGTGGACCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp TTACGCCAGTGCCATACGGCAGCCAGAGTGACAACATaGCCCACGACTACCAGGGAGGGAAACAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LRQCHTAARVTT*PTTTREGNRLP
Trigger: GGGCAGCCTGTTTCCCTCCCTGGTAGTCGTGGGTCATGTTGTCACTCTGGCTGCCGTATGGCACTGGCGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000165453.8
ENSMUST00000169714.8
CDS TCA 72 bp TCTTCTGCACACGGTCTCGTTCATCTGCAATGCGGATaGCGGCCCGCTCTGCAGGGTCCAAGACGCTCCCAT +
Preference number: 6 (lower is better)
Translates to: SSAHGLVHLQCG*RPALQGPRRSH
Trigger: ATGGGAGCGTCTTGGACCCTGCAGAGCGGGCCGTCATCCGCATTGCAGATGAACGAGACCGTGTGCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089610.10
ENSMUST00000166428.8
ENSMUST00000167754.8
CDS GCA 72 bp AGCAACACAAGCTCCCGGTACTCCTGCCAACGAAGCTaGAGCTCATTGGCCCTCACTCCGTCCTGTGCACCA +
Preference number: 6 (lower is better)
Translates to: SNTSSRYSCQRS*SSLALTPSCAP
Trigger: TGGTGCACAGGACGGAGTGAGGGCCAATGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCTTGTGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp CATTGCAGCAGCAGCAACACAAGCTCCCGGTACTCCTaGCAACGAAGCTGCAGCTCATTGGCCCTCACTCCG +
Preference number: 6 (lower is better)
Translates to: HCSSSNTSSRYS*QRSCSSLALTP
Trigger: CGGAGTGAGGGCCAATGAGCTGCAGCTTCGTTGGCAGGAGTACCGGGAGCTTGTGTTGCTGCTGCTGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp CTTCGCAGTTGCTTCTCCCGCTCCAGGATGGCCACATaGAGCTTGCCCCACTCCTTCTCCACATCTAGTGGG +
Preference number: 6 (lower is better)
Translates to: LRSCFSRSRMAT*SLPHSFSTSSG
Trigger: CCCACTAGATGTGGAGAAGGAGTGGGGCAAGCTGCATGTGGCCATCCTGGAGCGGGAGAAGCAACTGCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp CACCCACTCCTGCCTTCAGCCGGAGGTTGTACTCAGTaGGGATGGCTACCAGGCGCTCATGCAGACGATACA +
Preference number: 6 (lower is better)
Translates to: HPLLPSAGGCTQ*GWLPGAHADDT
Trigger: TGTATCGTCTGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACAACCTCCGGCTGAAGGCAGGAGTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp AGTGCGCTCCAATTGTGCGGTCTTCTCTGCAAAGGATaGCCGCTTGCTCTGCAGCTCCACTTCCGCACTGCG +
Preference number: 6 (lower is better)
Translates to: SALQLCGLLCKG*PLALQLHFRTA
Trigger: CGCAGTGCGGAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGCAGAGAAGACCGCACAATTGGAGCGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCCTCCCGCAGCTGGGCCACTGTTACATGCTCCTCCTaGAGAGTGCGCTCCAATTGTGCGGTCTTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SSRSWATVTCSS*RVRSNCAVFSA
Trigger: TGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCAGCTGCGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CCTCAGGCGCTCATTCTCGGCCTCCTTCTCTTTGAGTaGAATCTCTGCCTCCGTCTTGAGCCGTGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: PQALILGLLLFE*NLCLRLEPCGL
Trigger: GAGGCCACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGAGAATGAGCGCCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCCGGGCTGCCTCTGTTACCTCGGCCTTTAGTCGCTaGAGCTCCTCATCCAGGATGCTCTTCTGGTGGTCA +
Preference number: 6 (lower is better)
Translates to: CRAASVTSAFSR*SSSSRMLFWWS
Trigger: TGACCACCAGAAGAGCATCCTGGATGAGGAGCTGCAGCGACTAAAGGCCGAGGTAACAGAGGCAGCCCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp AGCAGCTCAGCCTCGGCCTTGAGCCTCGTGGCTTCCTaGACCGCCTGCATCTTCTCCTTCAGCATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SSSASALSLVAS*TACIFSFSIFS
Trigger: AGAGAAGATGCTGAAGGAGAAGATGCAGGCGGTGCAGGAAGCCACGAGGCTCAAGGCCGAGGCTGAGCTGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCAGGGCCTGGGTCTCCTGCAGTATCTGCTCCTGCTaGACAGTCTGCATCTCCTCCGACTTGAGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: CRAWVSCSICSC*TVCISSDLSCS
Trigger: ACTGCAGCTCAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TTCTGCAGGGCCTGGGTCTCCTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCCTCCGACTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: FCRAWVSCSICS*CTVCISSDLSC
Trigger: GCAGCTCAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ATGACCTTCTCCACGGTGACCTTGCCTGTGCGGAACTaGCGCAGCAACTCCTGCCGCTGCTCCTCAGTAAAG +
Preference number: 6 (lower is better)
Translates to: MTFSTVTLPVRN*RSNSCRCSSVK
Trigger: CTTTACTGAGGAGCAGCGGCAGGAGTTGCTGCGGCAGTTCCGCACAGGCAAGGTCACCGTGGAGAAGGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCTTCAGGGCCTGGGCAGCTGACATCTTGGTCTTGGTaGGTGGGTCCTCAAACCCACAGAAGGCCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: SSGPGQLTSWSW*VGPQTHRRPSG
Trigger: CCCAGAAGGCCTTCTGTGGGTTTGAGGACCCACGCACCAAGACCAAGATGTCAGCTGCCCAGGCCCTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGCACACGGTCTCGTTCATCTTGCTCATCCTTTGCCTaGCGATGCCCCTTACGCCAGTGCCATACGGCAGCC +
Preference number: 6 (lower is better)
Translates to: CTRSRSSCSSFA*RCPLRQCHTAA
Trigger: GGCTGCCGTATGGCACTGGCGTAAGGGGCATCGGCAGGCAAAGGATGAGCAAGATGAACGAGACCGTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000165453.8
ENSMUST00000169714.8
CDS GCA 72 bp TTCTGCAGGGCCTGGGTCTCCTGCAGTATCTGCTCCTaGTGCACAGTCTGCATCTCCTCCTCTTCCATGCGG +
Preference number: 6 (lower is better)
Translates to: FCRAWVSCSICS*CTVCISSSSMR
Trigger: CCGCATGGAAGAGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165210.8
CDS CCA 72 bp CTGGAGGGGAACTTGCGCTCCTCAAAAGCAGCGGTGTaGTGCCGGATCCATTGCAGCAGCAGCAACACAAGC +
Preference number: 6 (lower is better)
Translates to: LEGNLRSSKAAV*CRIHCSSSNTS
Trigger: GCTTGTGTTGCTGCTGCTGCAATGGATCCGGCACCACACCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp AAGTCCACGCCCCACTCAGCACTGTCTATTCGACGCTaGTTCTCCTCTACCCAGGCCAGCAGGTCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: KSTPHSALSIRR*FSSTQASRSCR
Trigger: CCTGCAAGACCTGCTGGCCTGGGTAGAGGAGAACCAGCGTCGAATAGACAGTGCTGAGTGGGGCGTGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp CTTAGGGTGTTGAATACTGGCTGCTGTGCCTCGGCCTaGGCCCGCAGCTTCTTTAGTGAGGCCTTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: LRVLNTGCCASA*ARSFFSEALVA
Trigger: AGCCACCAAGGCCTCACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTCAACACCCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp GCCTTGGCCCGCTTGGCCAGGCCTGAGAGGTGCCCCTaGTACTCATTCAGTTGTTCCTTCTCATCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: ALARLARPERCP*YSFSCSFSSWA
Trigger: TGCCCAGGATGAGAAGGAACAACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp GAAGGCCTGGTAGTGCAATTCCAGGTTGCGCAGAGCTaGTCGCTGCTCCTCGGGCTTCAGTGTGCGGAACGT +
Preference number: 6 (lower is better)
Translates to: EGLVVQFQVAQS*SLLLGLQCAER
Trigger: ACGTTCCGCACACTGAAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTGGAATTGCACTACCAGGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp AGGCGCCTCAGGCGCTCATTCTCGGCCTCCTTCTCTTaGAGTGCAATCTCTGCCTCCGTCTTGAGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: RRLRRSFSASFS*SAISASVLSRV
Trigger: CACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGAGAATGAGCGCCTGAGGCGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CAGCTGGTCGTGCGTGTCCTTATTGAGGTAGCCGCGTaGGTAAGCCACCTCCAGAGGGAGGTGGAAACCCAG +
Preference number: 6 (lower is better)
Translates to: QLVVRVLIEVAA*VSHLQREVETQ
Trigger: CTGGGTTTCCACCTCCCTCTGGAGGTGGCTTACCAACGCGGCTACCTCAATAAGGACACGCACGACCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TGGGCAGGGTTGCGTGGCTTCAACTGCACAATAGCCTTGGCCCGCTaGGCCAGGCCTGAGAGGTGCCCCTTGTACTCATTCAGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: WAGLRGFNCTIALAR*ARPERCPLYSFSCS
Trigger: GGAACAACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGCAACCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 90 bp CAGCTGGGCCACTGTTACATGCTCCTCCTGCAGAGTGCGCTCCAATaGTGCGGTCTTCTCTGCAAAGGATGCCCGCTTGCTCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: QLGHCYMLLLQSALQ*CGLLCKGCPLALQL
Trigger: GAGCTGCAGAGCAAGCGGGCATCCTTTGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp CGAAGGATGAGGGCCCGGTTTTCAGCTTCAATGCGAGCCTTGAGCTaGCCCAGCTCCTCCATCTGCACACGGACAGAGAAGAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RRMRARFSASMRALS*PSSSICTRTEKSSS
Trigger: GGAGGAGCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGCTGAAAACCGGGCCCTCATCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GTCTGCATCTCCTCCGACTTGAGCTGCAGTAACTTCGCCTCCTGCTaGAGCTTCTCCTTCTCACGCTCCAGCTCCGCAATGGCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: VCISSDLSCSNFASC*SFSFSRSSSAMASL
Trigger: GAGGGAGGCCATTGCGGAGCTGGAGCGTGAGAAGGAGAAGCTCAAGCAGGAGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TGCACAATAGCCTTGGCCCGCTTGGCCAGGCCTGAGAGGTGCCCCTaGTACTCATTCAGTTGTTCCTTCTCATCCTGGGCATCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: CTIALARLARPERCP*YSFSCSFSSWASCS
Trigger: GCTGCAGGATGCCCAGGATGAGAAGGAACAACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 90 bp TTAGACTTTTCGCTGGTAGAGCGAGACTCTTCCTCGGCTCGCGCCTaGCTGGCCAGAAGTACCTCCATCTCTGCCCGGACCTTAGCCAGT +
Preference number: 6 (lower is better)
Translates to: LDFSLVERDSSSARA*LARSTSISARTLAS
Trigger: ACTGGCTAAGGTCCGGGCAGAGATGGAGGTACTTCTGGCCAGCAAGGCGCGAGCCGAGGAAGAGTCTCGCTCTACCAGCGAAAAGTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TCCGAGTTGATGATCTCCCAGATGGTCACGGTCCTGCCCTGGAACTaGCCAAACGGTGCAGACACGGTGGCCTTTTCGAAGACGTCACGG +
Preference number: 6 (lower is better)
Translates to: SELMISQMVTVLPWN*PNGADTVAFSKTSR
Trigger: CCGTGACGTCTTCGAAAAGGCCACCGTGTCTGCACCGTTTGGCAAGTTCCAGGGCAGGACCGTGACCATCTGGGAGATCATCAACTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TGGGCCAGATTGATACGGTCTACCATGATCTTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACCGGGAAGCGCTCACCAGTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: WARLIRSTMILSTRP*LTASVTGKRSPVLG
Trigger: CCCCAGCACTGGTGAGCGCTTCCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAAGATCATGGTAGACCGTATCAATCTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp CACGGTCTCGTTCATCTTTCTTGCCCTCGGAGGCTCTaGGCACAGCCAGGTAGAGGTTGTCCTCTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: HGLVHLSCPRRL*AQPGRGCPLSW
Trigger: CCAGCTCAGAGGACAACCTCTACCTGGCTGTGCTCAGAGCCTCCGAGGGCAAGAAAGATGAACGAGACCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023226.13
CDS TCA 72 bp TCTCCACATCTAGTGGGTGGTAGCCAGGGGGAATCTTaGGCTGGCCCGCTTGTACTGCCCCCTCCAAAGACT +
Preference number: 6 (lower is better)
Translates to: SPHLVGGSQGES*AGPLVLPPPKT
Trigger: AGTCTTTGGAGGGGGCAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCTACCACCCACTAGATGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 72 bp GCTTCTCATGGAGTTCAGGGCCCACTACGCCCGCCTTaGCAGCCTCATGGACATACAGACGTTGGTTCCGCA +
Preference number: 6 (lower is better)
Translates to: ASHGVQGPLRPP*QPHGHTDVGSA
Trigger: TGCGGAACCAACGTCTGTATGTCCATGAGGCTGTCAAGGCGGGCGTAGTGGGCCCTGAACTCCATGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GTTCCTTGGTTACCCTCCCAGCCTGAAAGTCAGCCATaGGCCGGGCACGCTGATCCTCCGGGATCATGTTTG +
Preference number: 6 (lower is better)
Translates to: VPWLPSQPESQP*AGHADPPGSCL
Trigger: CAAACATGATCCCGGAGGATCAGCGTGCCCGGCTCATGGCTGACTTTCAGGCTGGGAGGGTAACCAAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GATCGAAAGCGTACCAGCGCGGTACTGGTCCAGTGCTaGGCGGTCAATGAGGTTCTTGGTGATGGCGTCGTC +
Preference number: 6 (lower is better)
Translates to: DRKRTSAVLVQC*AVNEVLGDGVV
Trigger: GACGACGCCATCACCAAGAACCTCATTGACCGCTCAGCACTGGACCAGTACCGCGCTGGTACGCTTTCGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp GATGCCCCTTACGCCAGTGCCATACGGCAGCCAGAGTaGCAACATGACCCACGACTACCAGGGAGGGAAACA +
Preference number: 6 (lower is better)
Translates to: DAPYASAIRQPE*QHDPRLPGRET
Trigger: TGTTTCCCTCCCTGGTAGTCGTGGGTCATGTTGTCACTCTGGCTGCCGTATGGCACTGGCGTAAGGGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000165453.8
ENSMUST00000169714.8
CDS GCA 72 bp TGTCTCGAAGGAAGGCCTGGTAGTGCAATTCCAGGTTaGGCAGAGCTTGTCGCTGCTCCTCGGGCTTCAGTG +
Preference number: 6 (lower is better)
Translates to: CLEGRPGSAIPG*AELVAAPRASV
Trigger: CACTGAAGCCCGAGGAGCAGCGACAAGCTCTGCGCAACCTGGAATTGCACTACCAGGCCTTCCTTCGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CCCCGCAACTCATCTCTTAGGGTGTTGAATACTGGCTaGTGTGCCTCGGCCTGGGCCCGCAGCTTCTTTAGT +
Preference number: 6 (lower is better)
Translates to: PRNSSLRVLNTG*CASAWARSFFS
Trigger: ACTAAAGAAGCTGCGGGCCCAGGCCGAGGCACAGCAGCCAGTATTCAACACCCTAAGAGATGAGTTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CTCCTGCAGAGTGCGCTCCAATTGTGCGGTCTTCTCTaGAAAGGATGCCCGCTTGCTCTGCAGCTCCACTTC +
Preference number: 6 (lower is better)
Translates to: LLQSALQLCGLL*KGCPLALQLHF
Trigger: GAAGTGGAGCTGCAGAGCAAGCGGGCATCCTTTGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCCAGGATGCTCTTCTGGTGGTCAGTCTCCTCTAGCTaGAGCCTCAGTGTGGTCAGCTCCTGCTCTACCTGG +
Preference number: 6 (lower is better)
Translates to: SRMLFWWSVSSS*SLSVVSSCSTW
Trigger: CCAGGTAGAGCAGGAGCTGACCACACTGAGGCTGCAGCTAGAGGAGACTGACCACCAGAAGAGCATCCTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCAATGCGAGCCTTGAGCTTGCCCAGCTCCTCCATCTaGACACGGACAGAGAAGAGCTCCTCCTCTACCTGG +
Preference number: 6 (lower is better)
Translates to: SMRALSLPSSSI*TRTEKSSSSTW
Trigger: CCAGGTAGAGGAGGAGCTCTTCTCTGTCCGTGTGCAGATGGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp AAGCTCTTCTGCAGGGCCTGGGTCTCCTGCAGTATCTaGTCCTGCTGCACAGTCTGCATCTCCTCCGACTTG +
Preference number: 6 (lower is better)
Translates to: KLFCRAWVSCSI*SCCTVCISSDL
Trigger: CAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCAGAGAGGAAGCTCTTCTGCAGGGCCTGGGTCTCCTaGAGTATCTGCTCCTGCTGCACAGTCTGCATCTCC +
Preference number: 6 (lower is better)
Translates to: SERKLFCRAWVS*SICSCCTVCIS
Trigger: GGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCAGGCCCTGCAGAAGAGCTTCCTCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GTGGCTTCAAGCTCTTGGAGAGTGGCAGGCACAGCCTaGGCCTCCTTCAGCTGCTCCTCATGGGTTTTAAGC +
Preference number: 6 (lower is better)
Translates to: VASSSWRVAGTA*ASFSCSSWVLS
Trigger: GCTTAAAACCCATGAGGAGCAGCTGAAGGAGGCCCAGGCTGTGCCTGCCACTCTCCAAGAGCTTGAAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp CCACAATCACCACGCGGCGCTTGCGCACTGAGGACTTaGAGGATGTCTTCCGTTCCCGCTTCTTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: PQSPRGACALRT*RMSSVPASSPS
Trigger: TGAAGGAGAAGAAGCGGGAACGGAAGACATCCTCCAAGTCCTCAGTGCGCAAGCGCCGCGTGGTGATTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TTGCGTGGCTTCAACTGCACAATAGCCTTGGCCCGCTaGGCCAGGCCTGAGAGGTGCCCCTTGTACTCATTC +
Preference number: 6 (lower is better)
Translates to: LRGFNCTIALAR*ARPERCPLYSF
Trigger: GAATGAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTGAAGCCACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp AGGATGAGGGCCCGGTTTTCAGCTTCAATGCGAGCCTaGAGCTTGCCCAGCTCCTCCATCTGCACACGGACA +
Preference number: 6 (lower is better)
Translates to: RMRARFSASMRA*SLPSSSICTRT
Trigger: TGTCCGTGTGCAGATGGAGGAGCTGGGCAAGCTCAAGGCTCGCATTGAAGCTGAAAACCGGGCCCTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp AGCTTCTCATGGAGTTCAGGGCCCACTACGCCCGCCTaGACAGCCTCATGGACATACAGACGTTGGTTCCGC +
Preference number: 6 (lower is better)
Translates to: SFSWSSGPTTPA*TASWTYRRWFR
Trigger: GCGGAACCAACGTCTGTATGTCCATGAGGCTGTCAAGGCGGGCGTAGTGGGCCCTGAACTCCATGAGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CCCACAGAGGAGGAGCGGGAACGGAAGCCACCGGCATaGCCTGAGAGCATGTCAGCAAACTCAGTGATCGAA +
Preference number: 6 (lower is better)
Translates to: PTEEERERKPPA*PESMSANSVIE
Trigger: TTCGATCACTGAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCGTTCCCGCTCCTCCTCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CTTCTGCACACGGTCTCGTTCATCTACACAACAGAGTaGCCCGTAGAGGTAGCCCCTGCGGACCTGCTCGCA +
Preference number: 6 (lower is better)
Translates to: LLHTVSFIYTTE*PVEVAPADLLA
Trigger: TGCGAGCAGGTCCGCAGGGGCTACCTCTACGGGCAACTCTGTTGTGTAGATGAACGAGACCGTGTGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072692.11
CDS CAA 90 bp TTCATCTTCTCGGCCTCCTCCTCCAGGAAGCGCTGTGTGTTGTCCTaGTCACGAAGGATGAGGGCCCGGTTTTCAGCTTCAATGCGAGCC +
Preference number: 6 (lower is better)
Translates to: FIFSASSSRKRCVLS*SRRMRARFSASMRA
Trigger: GGCTCGCATTGAAGCTGAAAACCGGGCCCTCATCCTTCGTGACAAGGACAACACACAGCGCTTCCTGGAGGAGGAGGCCGAGAAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp CGGATGATGCCCTTCTTCATAGCCTGGTACACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACTCCGGCAATGCAGCTGGTACCCTCG +
Preference number: 6 (lower is better)
Translates to: RMMPFFIAWYTESRS*VASTKTPAMQLVPS
Trigger: CGAGGGTACCAGCTGCATTGCCGGAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGGCATCATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GAAGATGAGCCCACAGAGGAGGAGCGGGAACGGAAGCCACCGGCATaGCCTGAGAGCATGTCAGCAAACTCAGTGATCGAAAGCGTACCA +
Preference number: 6 (lower is better)
Translates to: EDEPTEEERERKPPA*PESMSANSVIESVP
Trigger: TGGTACGCTTTCGATCACTGAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCGTTCCCGCTCCTCCTCTGTGGGCTCATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp GCCAGATTGATACGGTCTACCATGATCTTGTCCACCAGGCCCTTGTaGACAGCTTCAGTGACCGGGAAGCGCTCACCAGTGCTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: ARLIRSTMILSTRPL*TASVTGKRSPVLGS
Trigger: TGACCCCAGCACTGGTGAGCGCTTCCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAAGATCATGGTAGACCGTATCAATCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp CCACAGAAGGCCTTCTGGGCCAGATTGATACGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTGACAGCTTCAGTGACCGGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: PQKAFWARLIRSTMI*STRPLLTASVTGKR
Trigger: GCGCTTCCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAAGATCATGGTAGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp ACAGCGCAGGCCTTGGTAGCCCTCTACCATACGCTGTaGCCACAGCAGCAGCTTCTCCTTTGCTGTCATGTC +
Preference number: 6 (lower is better)
Translates to: TAQALVALYHTL*PQQQLLLCCHV
Trigger: GACATGACAGCAAAGGAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAGGGCTACCAAGGCCTGCGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169714.8
ENSMUST00000171634.8
CDS TCA 72 bp AGTCCGCACGGAGCCCACCTCGGACAGCTCTTTGACTaGTGTCTTGCCATCCTTGAGCTGGTCAAACTGAGC +
Preference number: 6 (lower is better)
Translates to: SPHGAHLGQLFD*CLAILELVKLS
Trigger: GCTCAGTTTGACCAGCTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTCCGAGGTGGGCTCCGTGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp CCTGCTCCGACAACTCCAGGTACGTCTGGTGGTCAATaGGACCCTTGCGGTAGGCCTCGTACACAGACATCT +
Preference number: 6 (lower is better)
Translates to: PAPTTPGTSGGQ*DPCGRPRTQTS
Trigger: AGATGTCTGTGTACGAGGCCTACCGCAAGGGTCTCATTGACCACCAGACGTACCTGGAGTTGTCGGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp CACCGGCATTGCCTGAGAGCATGTCAGCAAACTCAGTaGTCGAAAGCGTACCAGCGCGGTACTGGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: HRHCLRACQQTQ*SKAYQRGTGPV
Trigger: CACTGGACCAGTACCGCGCTGGTACGCTTTCGATCACTGAGTTTGCTGACATGCTCTCAGGCAATGCCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS TCA 72 bp AGAGGAGGAGCGGGAACGGAAGCCACCGGCATTGCCTaGGAGCATGTCAGCAAACTCAGTGATCGAAAGCGT +
Preference number: 6 (lower is better)
Translates to: RGGAGTEATGIA*EHVSKLSDRKR
Trigger: ACGCTTTCGATCACTGAGTTTGCTGACATGCTCTCAGGCAATGCCGGTGGCTTCCGTTCCCGCTCCTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GTAGCCAGGGGGAATCTTGAGCTGGCCCGCTTGTACTaGCCCCTCCAAAGACTGGTAGATAACTTTGGACCG +
Preference number: 6 (lower is better)
Translates to: VARGNLELARLY*PLQRLVDNFGP
Trigger: CGGTCCAAAGTTATCTACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp AGGTTGTACTCAGTGCGGATGGCTACCAGGCGCTCATaGAGACGATACACCCTCCGGTACATCTGTTCACCC +
Preference number: 6 (lower is better)
Translates to: RLYSVRMATRRS*RRYTLRYICSP
Trigger: GGGTGAACAGATGTACCGGAGGGTGTATCGTCTGCATGAGCGCCTGGTAGCCATCCGCACTGAGTACAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp GCAGCTGGGCCACTGTTACATGCTCCTCCTGCAGAGTaGGCTCCAATTGTGCGGTCTTCTCTGCAAAGGATG +
Preference number: 6 (lower is better)
Translates to: AAGPLLHAPPAE*APIVRSSLQRM
Trigger: CATCCTTTGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAGGAGCATGTAACAGTGGCCCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CTCATTCTCGGCCTCCTTCTCTTTGAGTGCAATCTCTaGCTCCGTCTTGAGCCGTGTGGCCTCACTGATGGC +
Preference number: 6 (lower is better)
Translates to: LILGLLLFECNL*LRLEPCGLTDG
Trigger: GCCATCAGTGAGGCCACACGGCTCAAGACGGAGGCAGAGATTGCACTCAAAGAGAAGGAGGCCGAGAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCGTGGTCACTCTGCTGTCGCTGGATCTCCAGCGTCTaGACCAACGTCACCTTCTCCTGTGTCGCAAGTTCA +
Preference number: 6 (lower is better)
Translates to: SWSLCCRWISSV*TNVTFSCVASS
Trigger: TGAACTTGCGACACAGGAGAAGGTGACGTTGGTGCAGACGCTGGAGATCCAGCGACAGCAGAGTGACCACGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TGGGTCTCCTGCAGTATCTGCTCCTGCTGCACAGTCTaGATCTCCTCCGACTTGAGCTGCAGTAACTTCGCC +
Preference number: 6 (lower is better)
Translates to: WVSCSICSCCTV*ISSDLSCSNFA
Trigger: GGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGATACTGCAGGAGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ACTCCGGCAATGCAGCTGGTACCCTCGAGGAACTTCTaGAGGTTCTTAGTGACCTCCTCGATGGAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: TPAMQLVPSRNF*RFLVTSSMEVR
Trigger: CCTGACCTCCATCGAGGAGGTCACTAAGAACCTGCAGAAGTTCCTCGAGGGTACCAGCTGCATTGCCGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CGAGTCTCCACCTCCTCCACGATGGTGATGACAATCTaGATGACCTTCTCCACGGTGACCTTGCCTGTGCGG +
Preference number: 6 (lower is better)
Translates to: RVSTSSTMVMTI*MTFSTVTLPVR
Trigger: CCGCACAGGCAAGGTCACCGTGGAGAAGGTCATCAAGATTGTCATCACCATCGTGGAGGAGGTGGAGACTCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp AGCAGAGTCCGCACGGAGCCCACCTCGGACAGCTCTTaGACTGATGTCTTGCCATCCTTGAGCTGGTCAAAC +
Preference number: 6 (lower is better)
Translates to: SRVRTEPTSDSS*TDVLPSLSWSN
Trigger: GTTTGACCAGCTCAAGGATGGCAAGACATCAGTCAAAGAGCTGTCCGAGGTGGGCTCCGTGCGGACTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CGGTACTGGTCCAGTGCTGAGCGGTCAATGAGGTTCTaGGTGATGGCGTCGTCGATGTCATACTGGCGACCA +
Preference number: 6 (lower is better)
Translates to: RYWSSAERSMRF*VMASSMSYWRP
Trigger: TGGTCGCCAGTATGACATCGACGACGCCATCACCAAGAACCTCATTGACCGCTCAGCACTGGACCAGTACCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp GGGTCCTCAAACCCACAGAAGGCCTTCTGGGCCAGATaGATACGGTCTACCATGATCTTGTCCACCAGGCCC +
Preference number: 6 (lower is better)
Translates to: GSSNPQKAFWAR*IRSTMILSTRP
Trigger: GGGCCTGGTGGACAAGATCATGGTAGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGGGTTTGAGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TCTTCTGCACACGGTCTCGTTCATCTTGCTCATCCTTaGCCTGCCGATGCCCCTTACGCCAGTGCCATACGG +
Preference number: 6 (lower is better)
Translates to: SSAHGLVHLAHP*PADAPYASAIR
Trigger: CCGTATGGCACTGGCGTAAGGGGCATCGGCAGGCAAAGGATGAGCAAGATGAACGAGACCGTGTGCAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000054449.14
ENSMUST00000165453.8
ENSMUST00000169714.8
CDS CAA 90 bp GGTAGCCCTCTACCATACGCTGTGACCACAGCAGCAGCTTCTCCTTaGCTGTCATGTCCTCCGACTGTCCGCTCACCTGAATGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: GSPLPYAVTTAAASP*LSCPPTVRSPECLR
Trigger: TCTCAGACATTCAGGTGAGCGGACAGTCGGAGGACATGACAGCAAAGGAGAAGCTGCTGCTGTGGTCACAGCGTATGGTAGAGGGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169714.8
ENSMUST00000171634.8
CDS TCA 72 bp AGCCCAGCCTCCATCTGTAGCTTGCTCACAATGCGCTaGAGACACTCCAGCCTCTCAAACTCGCTTCGCAGT +
Preference number: 6 (lower is better)
Translates to: SPASICSLLTMR*RHSSLSNSLRS
Trigger: ACTGCGAAGCGAGTTTGAGAGGCTGGAGTGTCTTCAGCGCATTGTGAGCAAGCTACAGATGGAGGCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 72 bp CAACTGCACAATAGCCTTGGCCCGCTTGGCCAGGCCTaGGAGGTGCCCCTTGTACTCATTCAGTTGTTCCTT +
Preference number: 6 (lower is better)
Translates to: QLHNSLGPLGQA*EVPLVLIQLFL
Trigger: AAGGAACAACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGTGCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 72 bp TCTTGTAGCTGTAGCGCTGTGGCCTCGTCCATGACTTaGGAGCGTACCAGCTCCTCCACAGTGATCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SCSCSAVASSMT*ERTSSSTVICL
Trigger: CAAGCAGATCACTGTGGAGGAGCTGGTACGCTCTCAAGTCATGGACGAGGCCACAGCGCTACAGCTACAAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ACAATAGCCTTGGCCCGCTTGGCCAGGCCTGAGAGGTaGCCCTTGTACTCATTCAGTTGTTCCTTCTCATCC +
Preference number: 6 (lower is better)
Translates to: TIALARLARPER*PLYSFSCSFSS
Trigger: GGATGAGAAGGAACAACTGAATGAGTACAAGGGGCACCTCTCAGGCCTGGCCAAGCGGGCCAAGGCTATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp GCTCCAGGCTTTGTAGTAACTGCTGGTAATGGCGGCTaGAAGATCCATACTCGCGCTCTGCCACTAGACGGT +
Preference number: 6 (lower is better)
Translates to: APGFVVTAGNGG*KIHTRALPLDG
Trigger: ACCGTCTAGTGGCAGAGCGCGAGTATGGATCTTGCAGCCGCCATTACCAGCAGTTACTACAAAGCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCCTTCTGCCGGAGTGTCTGCTCTGCAAACTTTTTATaGTTCTCCATCTCCGCGTCGGCTGCCTGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: AFCRSVCSANFL*FSISASAACFC
Trigger: ACAGAAGCAGGCAGCCGACGCGGAGATGGAGAAGCATAAAAAGTTTGCAGAGCAGACACTCCGGCAGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp TCTCATTGGTGGGCTTCAGTAACAGTCCTGCAATGCTaGTGCGGCCCTTCAGGTACCGGTACACATCTTCCC +
Preference number: 6 (lower is better)
Translates to: SHWWASVTVLQC*CGPSGTGTHLP
Trigger: GGGAAGATGTGTACCGGTACCTGAAGGGCCGCAGCAGCATTGCAGGACTGTTACTGAAGCCCACCAATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GCCGTTCCTTGGTGGCATCAACAAAGACTCCGGCAATaGAGCTGGTACCCTCGAGGAACTTCTGCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: AVPWWHQQRLRQ*SWYPRGTSAGS
Trigger: AGAACCTGCAGAAGTTCCTCGAGGGTACCAGCTGCATTGCCGGAGTCTTTGTTGATGCCACCAAGGAACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp GAGGAGGAGATGGTGATCTCTTCCCACTCACACTCCTaGTCCGACAACTCCAGGTACGTCTGGTGGTCAATG +
Preference number: 6 (lower is better)
Translates to: EEEMVISSHSHS*SDNSRYVWWSM
Trigger: CATTGACCACCAGACGTACCTGGAGTTGTCGGAGCAGGAGTGTGAGTGGGAAGAGATCACCATCTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp CATAGGCAACATCCAGGGGCACACGGTGGCTTTTGCTaGGGTCTACAATGCCACCAGTGGATAACTGGGCAT +
Preference number: 6 (lower is better)
Translates to: HRQHPGAHGGFC*GLQCHQWITGH
Trigger: ATGCCCAGTTATCCACTGGTGGCATTGTAGACCCCAGCAAAAGCCACCGTGTGCCCCTGGATGTTGCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp AGGCAGATTCCATCTCCAGCACTTCACGGAGGTTCTTaGTGCCTTCCCGGAAGAGGTTGTAGGTCTCAAGGG +
Preference number: 6 (lower is better)
Translates to: RQIPSPALHGGS*CLPGRGCRSQG
Trigger: CCCTTGAGACCTACAACCTCTTCCGGGAAGGCACCAAGAACCTCCGTGAAGTGCTGGAGATGGAATCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GCAAACTCAGTGATCGAAAGCGTACCAGCGCGGTACTaGTCCAGTGCTGAGCGGTCAATGAGGTTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: ANSVIESVPARY*SSAERSMRFLV
Trigger: CACCAAGAACCTCATTGACCGCTCAGCACTGGACCAGTACCGCGCTGGTACGCTTTCGATCACTGAGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TGGGTGGTAGCCAGGGGGAATCTTGAGCTGGCCCGCTaGTACTGCCCCCTCCAAAGACTGGTAGATAACTTT +
Preference number: 6 (lower is better)
Translates to: WVVARGNLELAR*YCPLQRLVDNF
Trigger: AAAGTTATCTACCAGTCTTTGGAGGGGGCAGTACAAGCGGGCCAGCTCAAGATTCCCCCTGGCTACCACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp CACTGTTACATGCTCCTCCTGCAGAGTGCGCTCCAATaGTGCGGTCTTCTCTGCAAAGGATGCCCGCTTGCT +
Preference number: 6 (lower is better)
Translates to: HCYMLLLQSALQ*CGLLCKGCPLA
Trigger: AGCAAGCGGGCATCCTTTGCAGAGAAGACCGCACAATTGGAGCGCACTCTGCAGGAGGAGCATGTAACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp ATCTGCTCCTGCTGCACAGTCTGCATCTCCTCCGACTaGAGCTGCAGTAACTTCGCCTCCTGCTTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: ICSCCTVCISSD*SCSNFASCLSF
Trigger: GAAGCTCAAGCAGGAGGCGAAGTTACTGCAGCTCAAGTCGGAGGAGATGCAGACTGTGCAGCAGGAGCAGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CCCTTCTTCATAGCCTGGTACACCGAGAGCCGTTCCTaGGTGGCATCAACAAAGACTCCGGCAATGCAGCTG +
Preference number: 6 (lower is better)
Translates to: PFFIAWYTESRS*VASTKTPAMQL
Trigger: CAGCTGCATTGCCGGAGTCTTTGTTGATGCCACCAAGGAACGGCTCTCGGTGTACCAGGCTATGAAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TACTGGCGACCAGAGCGGCGGTCGATGATCATAGACTaGACGACGCCATCTGAGGAGGAGATGGTGATCTCT +
Preference number: 6 (lower is better)
Translates to: YWRPERRSMIID*TTPSEEEMVIS
Trigger: AGAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAGTCTATGATCATCGACCGCCGCTCTGGTCGCCAGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp ATACGGTCTACCATGATCTTGTCCACCAGGCCCTTGTaGACAGCTTCAGTGACCGGGAAGCGCTCACCAGTG +
Preference number: 6 (lower is better)
Translates to: IRSTMILSTRPL*TASVTGKRSPV
Trigger: CACTGGTGAGCGCTTCCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAAGATCATGGTAGACCGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp AACTGGCACCATAGGATCTCAATCTCTTCAAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCGGTGTGGTGCCGGATCCATTGCAGC +
Preference number: 6 (lower is better)
Translates to: NWHHRISISSKLEGN*RSSKAAVWCRIHCS
Trigger: GCTGCAATGGATCCGGCACCACACCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTGAGATCCTATGGTGCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 90 bp ACCTGTTTCATCTTCTCGGCCTCCTCCTCCAGGAAGCGCTGTGTGTaGTCCTTGTCACGAAGGATGAGGGCCCGGTTTTCAGCTTCAATG +
Preference number: 6 (lower is better)
Translates to: TCFIFSASSSRKRCV*SLSRRMRARFSASM
Trigger: CATTGAAGCTGAAAACCGGGCCCTCATCCTTCGTGACAAGGACAACACACAGCGCTTCCTGGAGGAGGAGGCCGAGAAGATGAAACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TCGATGTCATACTGGCGACCAGAGCGGCGGTCGATGATCATAGACTaGACGACGCCATCTGAGGAGGAGATGGTGATCTCTTCCCACTCA +
Preference number: 6 (lower is better)
Translates to: SMSYWRPERRSMIID*TTPSEEEMVISSHS
Trigger: TGAGTGGGAAGAGATCACCATCTCCTCCTCAGATGGCGTCGTCAAGTCTATGATCATCGACCGCCGCTCTGGTCGCCAGTATGACATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 90 bp TTGGTGCGTGGGTCCTCAAACCCACAGAAGGCCTTCTGGGCCAGATaGATACGGTCTACCATGATCTTGTCCACCAGGCCCTTGTTGACA +
Preference number: 6 (lower is better)
Translates to: LVRGSSNPQKAFWAR*IRSTMILSTRPLLT
Trigger: TGTCAACAAGGGCCTGGTGGACAAGATCATGGTAGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGGGTTTGAGGACCCACGCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp ATAGGATCTCAATCTCTTCAAAGCTGGAGGGGAACTTaGGCTCCTCAAAAGCAGCGGTGTGGTGCCGGATCC +
Preference number: 6 (lower is better)
Translates to: IGSQSLQSWRGT*APQKQRCGAGS
Trigger: GGATCCGGCACCACACCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTGAGATCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp CAGCTGTACTTCCTGCGTAACGTCTCCTGTAGCTTCTaGAACTGTTCCTCCGCCTCCCGAACATCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: QLYFLRNVSCSF*NCSSASRTSEK
Trigger: CTTCTCAGATGTTCGGGAGGCGGAGGAACAGTTGCAGAAGCTACAGGAGACGTTACGCAGGAAGTACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp CAGATTCCATCTCCAGCACTTCACGGAGGTTCTTGGTaGCTTCCCGGAAGAGGTTGTAGGTCTCAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: QIPSPALHGGSW*LPGRGCRSQGR
Trigger: TCTCCCTTGAGACCTACAACCTCTTCCGGGAAGGCACCAAGAACCTCCGTGAAGTGCTGGAGATGGAATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp TGCTCCTCATGGGTTTTAAGCACCTCCTCAGCCCCCTaGGTACTGCGAATCACCAAGCTGATGGTCTTGAGT +
Preference number: 6 (lower is better)
Translates to: CSSWVLSTSSAP*VLRITKLMVLS
Trigger: ACTCAAGACCATCAGCTTGGTGATTCGCAGTACCCAGGGGGCTGAGGAGGTGCTTAAAACCCATGAGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp GCTGTAGGGCTGTGTAGACACTCAGTTTCTCATTGGTaGGCTTCAGTAACAGTCCTGCAATGCTGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: AVGLCRHSVSHW*ASVTVLQCCCG
Trigger: GCCGCAGCAGCATTGCAGGACTGTTACTGAAGCCCACCAATGAGAAACTGAGTGTCTACACAGCCCTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp ATGAGGTTCTTGGTGATGGCGTCGTCGATGTCATACTaGCGACCAGAGCGGCGGTCGATGATCATAGACTTG +
Preference number: 6 (lower is better)
Translates to: MRFLVMASSMSY*RPERRSMIIDL
Trigger: CAAGTCTATGATCATCGACCGCCGCTCTGGTCGCCAGTATGACATCGACGACGCCATCACCAAGAACCTCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CCA 72 bp TTGGTGCGTGGGTCCTCAAACCCACAGAAGGCCTTCTaGGCCAGATTGATACGGTCTACCATGATCTTGTCC +
Preference number: 6 (lower is better)
Translates to: LVRGSSNPQKAF*ARLIRSTMILS
Trigger: GGACAAGATCATGGTAGACCGTATCAATCTGGCCCAGAAGGCCTTCTGTGGGTTTGAGGACCCACGCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp CATAGGATCTCAATCTCTTCAAAGCTGGAGGGGAACTaGCGCTCCTCAAAAGCAGCGGTGTGGTGCCGGATC +
Preference number: 6 (lower is better)
Translates to: HRISISSKLEGN*RSSKAAVWCRI
Trigger: GATCCGGCACCACACCGCTGCTTTTGAGGAGCGCAAGTTCCCCTCCAGCTTTGAAGAGATTGAGATCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp TTCCGCTCGTGTTCCTCCACCACTGTGATGACGATTTaGATGATTTTCTCCACCGTGATGTGGCCCGTGCGG +
Preference number: 6 (lower is better)
Translates to: FRSCSSTTVMTI*MIFSTVMWPVR
Trigger: CCGCACGGGCCACATCACGGTGGAGAAAATCATCAAAATCGTCATCACAGTGGTGGAGGAACACGAGCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TTGATACGGTCTACCATGATCTTGTCCACCAGGCCCTaGTTGACAGCTTCAGTGACCGGGAAGCGCTCACCA +
Preference number: 6 (lower is better)
Translates to: LIRSTMILSTRP*LTASVTGKRSP
Trigger: TGGTGAGCGCTTCCCGGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAAGATCATGGTAGACCGTATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp GCCTTCTGGGCCAGATTGATACGGTCTACCATGATCTaGTCCACCAGGCCCTTGTTGACAGCTTCAGTGACC +
Preference number: 6 (lower is better)
Translates to: AFWARLIRSTMI*STRPLLTASVT
Trigger: GGTCACTGAAGCTGTCAACAAGGGCCTGGTGGACAAGATCATGGTAGACCGTATCAATCTGGCCCAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS GCA 72 bp CGATACACCCTCCGGTACATCTGTTCACCCTGTGGATaGCGCCCATCTTTAAGGGTCTGCACATCATTGAAC +
Preference number: 6 (lower is better)
Translates to: RYTLRYICSPCG*RPSLRVCTSLN
Trigger: GTTCAATGATGTGCAGACCCTTAAAGATGGGCGGCATCCACAGGGTGAACAGATGTACCGGAGGGTGTATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp CAGACGATACACCCTCCGGTACATCTGTTCACCCTGTaGATGCCGCCCATCTTTAAGGGTCTGCACATCATT +
Preference number: 6 (lower is better)
Translates to: QTIHPPVHLFTL*MPPIFKGLHII
Trigger: AATGATGTGCAGACCCTTAAAGATGGGCGGCATCCACAGGGTGAACAGATGTACCGGAGGGTGTATCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 90 bp TGTTCACCCTGTGGATGCCGCCCATCTTTAAGGGTCTGCACATCATaGAACAACAGCCGGATCATACCATCAGCCTTGTCCAGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: CSPCGCRPSLRVCTS*NNSRIIPSALSRSL
Trigger: GAGAGACCTGGACAAGGCTGATGGTATGATCCGGCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 90 bp AGGTCCCGCTCTGCCACCGAGAATGCCTGGTCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTATTCATATCTATGAGCATGGGCTTG +
Preference number: 6 (lower is better)
Translates to: RSRSATENAWSRFSR*VCRYTLFISMSMGL
Trigger: CAAGCCCATGCTCATAGATATGAATAAAGTGTATCGACAGACCAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGCAGAGCGGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 72 bp TCCTTTGCTGTCATGTCCTCCGACTGTCCGCTCACCTaGATGTCTGAGATCTGGAAGTGCAGGATGATTGTC +
Preference number: 6 (lower is better)
Translates to: SFAVMSSDCPLT*MSEIWKCRMIV
Trigger: GACAATCATCCTGCACTTCCAGATCTCAGACATTCAGGTGAGCGGACAGTCGGAGGACATGACAGCAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169714.8
ENSMUST00000171634.8
CDS CAA 72 bp TGTGGATGCCGCCCATCTTTAAGGGTCTGCACATCATaGAACAACAGCCGGATCATACCATCAGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: CGCRPSLRVCTS*NNSRIIPSALS
Trigger: GGACAAGGCTGATGGTATGATCCGGCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGGGCGGCATCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp TGTTCACCCTGTGGATGCCGCCCATCTTTAAGGGTCTaGACATCATTGAACAACAGCCGGATCATACCATCA +
Preference number: 6 (lower is better)
Translates to: CSPCGCRPSLRV*TSLNNSRIIPS
Trigger: TGATGGTATGATCCGGCTGTTGTTCAATGATGTGCAGACCCTTAAAGATGGGCGGCATCCACAGGGTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp TCAGGGCCGAGTAACTTTCTTTCTTGGCTGCCATGTTaGTATTGCGGTCACTCCAATCAAAGCCCACTTCCT +
Preference number: 6 (lower is better)
Translates to: SGPSNFLSWLPC*YCGHSNQSPLP
Trigger: AGGAAGTGGGCTTTGATTGGAGTGACCGCAATACCAACATGGCAGCCAAGAAAGAAAGTTACTCGGCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp CCAGTTCTCGCATCAGGGCCGAGTAACTTTCTTTCTTaGCTGCCATGTTGGTATTGCGGTCACTCCAATCAA +
Preference number: 6 (lower is better)
Translates to: PVLASGPSNFLS*LPCWYCGHSNQ
Trigger: TTGATTGGAGTGACCGCAATACCAACATGGCAGCCAAGAAAGAAAGTTACTCGGCCCTGATGCGAGAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp ACTTTATTCATATCTATGAGCATGGGCTTGTGCCGGTaGATGATAGCATTGAAGAGACGGCCATCGCGCCAA +
Preference number: 6 (lower is better)
Translates to: TLFISMSMGLCR*MIALKRRPSRQ
Trigger: TTGGCGCGATGGCCGTCTCTTCAATGCTATCATCCACCGGCACAAGCCCATGCTCATAGATATGAATAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp CGATACACTTTATTCATATCTATGAGCATGGGCTTGTaGCGGTGGATGATAGCATTGAAGAGACGGCCATCG +
Preference number: 6 (lower is better)
Translates to: RYTLFISMSMGL*RWMIALKRRPS
Trigger: CGATGGCCGTCTCTTCAATGCTATCATCCACCGGCACAAGCCCATGCTCATAGATATGAATAAAGTGTATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp TCTGCCACCGAGAATGCCTGGTCTAGGTTCTCCAGGTaGGTCTGTCGATACACTTTATTCATATCTATGAGC +
Preference number: 6 (lower is better)
Translates to: SATENAWSRFSR*VCRYTLFISMS
Trigger: GCTCATAGATATGAATAAAGTGTATCGACAGACCAACCTGGAGAACCTAGACCAGGCATTCTCGGTGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 90 bp TTGGACCGGTTTTTGTCTGCCTCCTTGGCAGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCACCATAGGATCTCAATCTCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: LDRFLSASLAGSSVS*NFKNWHHRISISSK
Trigger: CTTTGAAGAGATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAACCGGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS GCA 72 bp CTTGTACGTGATCAGCTGGAGCTCATAGTCCTTGATTaGATTGATGTACTGCTTAGCAAACTTCTGGCACTC +
Preference number: 6 (lower is better)
Translates to: LVRDQLELIVLD*IDVLLSKLLAL
Trigger: GAGTGCCAGAAGTTTGCTAAGCAGTACATCAATGCAATCAAGGACTATGAGCTCCAGCTGATCACGTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165210.8
ENSMUST00000169108.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
CDS CAA 72 bp TGTCGATACACTTTATTCATATCTATGAGCATGGGCTaGTGCCGGTGGATGATAGCATTGAAGAGACGGCCA +
Preference number: 6 (lower is better)
Translates to: CRYTLFISMSMG*CRWMIALKRRP
Trigger: TGGCCGTCTCTTCAATGCTATCATCCACCGGCACAAGCCCATGCTCATAGATATGAATAAAGTGTATCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS TCA 72 bp TTTTGTCTGCCTCCTTGGCAGGAAGTTCTGTCTCCTTaGACTTCAAAAACTGGCACCATAGGATCTCAATCT +
Preference number: 6 (lower is better)
Translates to: FCLPPWQEVLSP*TSKTGTIGSQS
Trigger: AGATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CCA 72 bp TTGGCAGGAAGTTCTGTCTCCTTGAACTTCAAAAACTaGCACCATAGGATCTCAATCTCTTCAAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LAGSSVSLNFKN*HHRISISSKLE
Trigger: CTCCAGCTTTGAAGAGATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCCTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8
CDS CAA 72 bp TTTTTGTCTGCCTCCTTGGCAGGAAGTTCTGTCTCCTaGAACTTCAAAAACTGGCACCATAGGATCTCAATC +
Preference number: 6 (lower is better)
Translates to: FLSASLAGSSVS*NFKNWHHRISI
Trigger: GATTGAGATCCTATGGTGCCAGTTTTTGAAGTTCAAGGAGACAGAACTTCCTGCCAAGGAGGCAGACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 18 transcripts:
ENSMUST00000023226.13
ENSMUST00000054449.14
ENSMUST00000071869.12
ENSMUST00000072692.11
ENSMUST00000073418.13
ENSMUST00000074834.12
ENSMUST00000076442.12
ENSMUST00000080857.12
ENSMUST00000089610.10
ENSMUST00000165453.8
ENSMUST00000166428.8
ENSMUST00000167754.8
ENSMUST00000169108.8
ENSMUST00000169289.8
ENSMUST00000169438.8
ENSMUST00000169714.8
ENSMUST00000171562.8
ENSMUST00000171634.8