Pregenerated sensors for PLD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055214Ensembl transcript IDs: ENSMUST00000065967.14, ENSMUST00000111166.2, ENSMUST00000111167.2, ENSMUST00000125404.8
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCCAAGCGATCGCCAGTCTAAGCCTGCACTGCCAATGTACACATaGTGTTTGTCCACAATCCAGAAGGACGACTGCAGCCGGCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: CPSDRQSKPALPMYT*CLSTIQKDDCSRPL Trigger: CAAGGGCCGGCTGCAGTCGTCCTTCTGGATTGTGGACAAACAGCATGTGTACATTGGCAGTGCAGGCTTAGACTGGCGATCGCTTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR GCA 90 bp | CACGTCCTTCAGTTGCTTAATGATGCTCCTGTTGTCTCTCACATCTaGCTGGTTGATGACAAGGCCCGTGCCAGCGTTCTGGGTAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: HVLQLLNDAPVVSHI*LVDDKARASVLGKV Trigger: GACTTTACCCAGAACGCTGGCACGGGCCTTGTCATCAACCAGGCAGATGTGAGAGACAACAGGAGCATCATTAAGCAACTGAAGGACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR CCA 90 bp | GTCTTGAAGGCTGGCATGAAATGGAGGTGCCTGTGCTCAGCTGCCTaGATAGGTCTTAGAGAGGATATGTCAGGGCAGATGCTTGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: VLKAGMKWRCLCSAA*IGLREDMSGQMLGS Trigger: AGAACCAAGCATCTGCCCTGACATATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCCAGCCTTCAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR TCA 90 bp | CCTTGTTGTAGGCGGTCATGTTCATGTATGTCACCTCAGCACCTTTaGATCTGCGGTCACGTCGCTCACCAGCTTGACTTCGATGTTTTG | + |
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Preference number: 1 (lower is better) Translates to: PCCRRSCSCMSPQHL*ICGHVAHQLDFDVL Trigger: CAAAACATCGAAGTCAAGCTGGTGAGCGACGTGACCGCAGATTCAAAGGTGCTGAGGTGACATACATGAACATGACCGCCTACAACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR GCA 90 bp | TGTTTTTCAGAAGTCTTGAAGGCTGGCATGAAATGGAGGTGCCTGTaGTCAGCTGCCTGGATAGGTCTTAGAGAGGATATGTCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CFSEVLKAGMKWRCL*SAAWIGLREDMSGQ Trigger: CTGCCCTGACATATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCCAGCCTTCAAGACTTCTGAAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR GCA 90 bp | CGAGTTCTTTCATCTGTCCAAGCGATCGCCAGTCTAAGCCTGCACTaGCAATGTACACATGCTGTTTGTCCACAATCCAGAAGGACGACT | + |
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Preference number: 1 (lower is better) Translates to: RVLSSVQAIASLSLH*QCTHAVCPQSRRTT Trigger: AGTCGTCCTTCTGGATTGTGGACAAACAGCATGTGTACATTGGCAGTGCAGGCTTAGACTGGCGATCGCTTGGACAGATGAAAGAACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR CCA 90 bp | TCCTTCAGTTGCTTAATGATGCTCCTGTTGTCTCTCACATCTGCCTaGTTGATGACAAGGCCCGTGCCAGCGTTCTGGGTAAAGTCATTC | + |
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Preference number: 1 (lower is better) Translates to: SFSCLMMLLLSLTSA*LMTRPVPAFWVKSF Trigger: GAATGACTTTACCCAGAACGCTGGCACGGGCCTTGTCATCAACCAGGCAGATGTGAGAGACAACAGGAGCATCATTAAGCAACTGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR CCA 90 bp | TGGACAGGCTTGAACAGTTCGGTTGTTTGGTGGGCTGTATGGATTTaGCATAAGGCGAATACCAGTCCCTCTCAAACACGTCCTTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: WTGLNSSVVWWAVWI*HKANTSPSQTRPSV Trigger: AACTGAAGGACGTGTTTGAGAGGGACTGGTATTCGCCTTATGCCAAATCCATACAGCCCACCAAACAACCGAACTGTTCAAGCCTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR TCA 90 bp | ATATCCTTTGTAAATCTAGGACCAGGCAGCTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCTGTCCAAGCGATCGCCAGTCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: ISFVNLGPGSCSCRR*HRVLSSVQAIASLS Trigger: GCTTAGACTGGCGATCGCTTGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAGCTGCCTGGTCCTAGATTTACAAAGGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR TCA 90 bp | GTTTTTAGGGCAAAAGAGTTTAGGAGAGTTCGACACAAAGGCCTGTaGCTTGGTTTCGTTCAATTGGAGCTGAAGCTTCTTCTCATTGTC | + |
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Preference number: 1 (lower is better) Translates to: VFRAKEFRRVRHKGL*LGFVQLELKLLLIV Trigger: GACAATGAGAAGAAGCTTCAGCTCCAATTGAACGAAACCAAGTCACAGGCCTTTGTGTCGAACTCTCCTAAACTCTTTTGCCCTAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR CCA 90 bp | TGTAAGCTGCCCCGTCTGTCACCATGTACTTGTTGCGGTTTAATTTaGGAAAGGTCTGATTCTTTTGTTCTTTCGTTGCACAAGCATTCT | + |
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Preference number: 1 (lower is better) Translates to: CKLPRLSPCTCCGLI*ERSDSFVLSLHKHS Trigger: AGAATGCTTGTGCAACGAAAGAACAAAAGAATCAGACCTTTCCCAAATTAAACCGCAACAAGTACATGGTGACAGACGGGGCAGCTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR CCA 90 bp | ACAAGAACATGTTTGTCAGAAGACAGACTGATACCCTCAAAACCCTaGTATCAGAAGACAAGGAACAAGGGGACAGAAATGAGTGTTTTT | + |
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Preference number: 1 (lower is better) Translates to: TRTCLSEDRLIPSKP*YQKTRNKGTEMSVF Trigger: AAAAACACTCATTTCTGTCCCCTTGTTCCTTGTCTTCTGATACCAGGGTTTTGAGGGTATCAGTCTGTCTTCTGACAAACATGTTCTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR CCA 90 bp | TCTAAGATCATAGTAAGAAGGAGTAGGGAAAATACAAAACAAGCTTaGAGAACTCTGGTACACCAGAAAGTAAGGGAAGGTTCCAAACTG | + |
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Preference number: 1 (lower is better) Translates to: SKIIVRRSRENTKQA*RTLVHQKVREGSKL Trigger: CAGTTTGGAACCTTCCCTTACTTTCTGGTGTACCAGAGTTCTCCAAGCTTGTTTTGTATTTTCCCTACTCCTTCTTACTATGATCTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
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| 3UTR GCA 90 bp | ATACTGTTAACCAAACAGAAATGTGAAACTGCTTTATTCTTCAAATaGAGACTTAATGGCTTGCTGGGTATTAGCAGGGGCACTTCATTT | + |
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Preference number: 1 (lower is better) Translates to: ILLTKQKCETALFFK*RLNGLLGISRGTSF Trigger: AAATGAAGTGCCCCTGCTAATACCCAGCAAGCCATTAAGTCTGCATTTGAAGAATAAAGCAGTTTCACATTTCTGTTTGGTTAACAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR CCA 90 bp | TTGAAAGGAGAAAGTGAAAGACTGATTTCCATTCTGTATACATTCTaGGGAATTCATATCATTTCCCCAAGACATTCTCACTTTTTGAAC | + |
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Preference number: 1 (lower is better) Translates to: LKGESERLISILYTF*GIHIISPRHSHFLN Trigger: GTTCAAAAAGTGAGAATGTCTTGGGGAAATGATATGAATTCCCCAGAATGTATACAGAATGGAAATCAGTCTTTCACTTTCTCCTTTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR CAA 90 bp | ACGCTCAGCGGCTCCCTCCCGGTGGCATTGGCCATGGCAGGTTGCTaGGAGGGAGACTTGAGTTTGGACAGGCTTGAACAGTTCGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: TLSGSLPVALAMAGC*EGDLSLDRLEQFGC Trigger: ACAACCGAACTGTTCAAGCCTGTCCAAACTCAAGTCTCCCTCCAAGCAACCTGCCATGGCCAATGCCACCGGGAGGGAGCCGCTGAGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAACCGGGGCCAAAGAGGGAAGGGCTCTGTTCTGAGCACAGAGTCAGGAGCCCCGTGCCAGCGTTCTaGGTAAAGTCATTCCCTACC | + |
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Preference number: 2 (lower is better) Translates to: RKPGPKREGLCSEHRVRSPVPAF*VKSFPT Trigger: GGTAGGGAATGACTTTACCCAGAACGCTGGCACGGG...GCTCCTGACTCTGTGCTCAGAACAGAGCCCTTCCCTCTTTGGCCCCGGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR CAA 90 bp | TCTGTTCTGAGCACAGAGTCAGGAGCCACACTGGGCATAGGCATCTaGACCACTTCCTCTGGCCCTGAAGAGGTCACACCCCTCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: SVLSTESGATLGIGI*TTSSGPEEVTPLSC Trigger: ACATGAGAGGGGTGTGACCTCTTCAGGGCCAGAGGAAGTGGTCAAGATGCCTATGCCCAGTGTGGCTCCTGACTCTGTGCTCAGAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATGAAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATGGCATGAAATGGAGGTaGCTGTGCTCAGCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GMKWRCLCSAAWIGLREDGMKWR*LCSAAW Trigger: CCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCC...ATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAACCGGGGCCAAAGAGGGAAGGGCTCTGTTCTGAGCACAGAGTCAGGAGCAAGGCTGGCATGAAATaGAGGTGCCTGTGCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RKPGPKREGLCSEHRVRSKAGMK*RCLCSA Trigger: AGCTGAGCACAGGCACCTCCATTTCATGCCAGCCTT...GCTCCTGACTCTGTGCTCAGAACAGAGCCCTTCCCTCTTTGGCCCCGGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR-3UTR TCA 90 bp | AAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATATGTCACACTTCCTCTGGCCCTaGAGAGGTCACACCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KWRCLCSAAWIGLREDMSHFLWP*RGHTPL Trigger: GAGAGGGGTGTGACCTCTTCAGGGCCAGAGGAAGTG...TGACATATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAACCGGGGCCAAAGAGGGAAGGGCTCTGTTCTGAGCACAGAGTCAGGAGCGTCAGGGCAGATGCTTaGTTCTGTCTGCATCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: RKPGPKREGLCSEHRVRSVRADA*FCLHLL Trigger: GAGAAGATGCAGACAGAACCAAGCATCTGCCCTGAC...GCTCCTGACTCTGTGCTCAGAACAGAGCCCTTCCCTCTTTGGCCCCGGTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR CAA 90 bp | CAGTCCCTCTCAAACACGTCCTTCAGTTGCTTAATGATGCTCCTGTaGTCTCTCACATCTGCCTGGTTGATGACAAGGCCCGTGCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: QSLSNTSFSCLMMLL*SLTSAWLMTRPVPA Trigger: CGCTGGCACGGGCCTTGTCATCAACCAGGCAGATGTGAGAGACAACAGGAGCATCATTAAGCAACTGAAGGACGTGTTTGAGAGGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCACAGAGTCAGGAGCCACACTGGGCATAGGCATCTTGACCACTTCCTCTCGACACAAAGGCCTGTaGCTTGGTTTCGTTCAATTG | + |
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Preference number: 2 (lower is better) Translates to: LSTESGATLGIGILTTSSRHKGL*LGFVQL Trigger: CAATTGAACGAAACCAAGTCACAGGCCTTTGTGTCG...AGAGGAAGTGGTCAAGATGCCTATGCCCAGTGTGGCTCCTGACTCTGTGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAAACCGGGGCCAAAGAGGGAAGGGCTCTGTTCTGAGCACAGAGTCAGGAGCTCCTTGCGAGGTAGGTaGGGATTATTGTCTACATTA | + |
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Preference number: 2 (lower is better) Translates to: RKPGPKREGLCSEHRVRSSLRGR*GLLSTL Trigger: TAATGTAGACAATAATCCTCACCTACCTCGCAAGGA...GCTCCTGACTCTGTGCTCAGAACAGAGCCCTTCCCTCTTTGGCCCCGGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCCCTCTGGATTCTTCGGGAGAGTGCCTGGTATTGGTGCTACCAGGATACGCAGACTTAATGGCTTaGTGGGTATTAGCAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: FCPLDSSGECLVLVLPGYADLMA*WVLAGA Trigger: TGCCCCTGCTAATACCCAGCAAGCCATTAAGTCTGC...GTATCCTGGTAGCACCAATACCAGGCACTCTCCCGAAGAATCCAGAGGGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCACAGAGTCAGGAGCCACACTGGGCATAGGCATCTTGACCACTTCCTCTTTTTGCGACGTCAGCTaGAGCAACTTCTCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LSTESGATLGIGILTTSSFCDVS*SNFSKR Trigger: TCTCTTTGAGAAGTTGCTCCAGCTGACGTCGCAAAA...AGAGGAAGTGGTCAAGATGCCTATGCCCAGTGTGGCTCCTGACTCTGTGCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR CCA 90 bp | AAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATATGTCACTCCATAGAGTCTCTTaGACCAGGTCTGAGGTACTC | + |
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Preference number: 2 (lower is better) Translates to: KWRCLCSAAWIGLREDMSLHRVS*TRSEVL Trigger: GAGTACCTCAGACCTGGTCCAAGAGACTCTATGGAG...TGACATATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAGAAGTCTTGAAGGCTGGCATGAAATGGAGGTGCCTGTGCTCAGCTGCCTTCCTGCATTTGGTCTaGAGCCTTGTGTGTCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: FSEVLKAGMKWRCLCSAAFLHLV*SLVCLL Trigger: TAACAGACACACAAGGCTTCAGACCAAATGCAGGAA...GGCAGCTGAGCACAGGCACCTCCATTTCATGCCAGCCTTCAAGACTTCTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCGGGAGAGTGCCTGGTATTGGTGCTACCAGGATACCACAGAGATTATTTGTCAGGGCAGATGCTTaGTTCTGTCTGCATCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: FFGRVPGIGATRIPQRLFVRADA*FCLHLL Trigger: GAGAAGATGCAGACAGAACCAAGCATCTGCCCTGAC...AAATAATCTCTGTGGTATCCTGGTAGCACCAATACCAGGCACTCTCCCGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| 3UTR-3UTR TCA 90 bp | AATGTACACGTACTGTTTGGCATCGTCAATCACACTGTAGATGGCATCGATGTCCTCTTGGACCAGGTCTaGGGTACTCTGCTCTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: NVHVLFGIVNHTVDGIDVLLDQV*GTLLLN Trigger: ATTCAAGAGCAGAGTACCTCAGACCTGGTCCAAGAG...GACATCGATGCCATCTACAGTGTGATTGACGATGCCAAACAGTACGTGTACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR GCA 90 bp | AAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATATGTCAAACACGTCCTTCAGTTaGTTAATGATGCTCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: KWRCLCSAAWIGLREDMSNTSFS*LMMLLL Trigger: CAACAGGAGCATCATTAAGCAACTGAAGGACGTGTT...TGACATATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR CAA 90 bp | CAGTTGGCTATTTCAGTGCAAATAGCTTTAAGAGACGAGATGAAGTaGAACGTGAGGGGATCAGTCTCCTTCCAGAAGCTTATGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: QLAISVQIALRDEMK*NVRGSVSFQKLMSS Trigger: GCTGCTCATAAGCTTCTGGAAGGAGACTGATCCCCTCACGTTCAACTTCATCTCGTCTCTTAAAGCTATTTGCACTGAAATAGCCAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR GCA 90 bp | CACCGACGCATAGACCTTTCCTTTATAATACTGTTAACCAAACAGAAATGTGAAGGCATGAAATGGAGGTaGCTGTGCTCAGCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: HRRIDLSFIILLTKQKCEGMKWR*LCSAAW Trigger: CCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCC...TTCACATTTCTGTTTGGTTAACAGTATTATAAAGGAAAGGTCTATGCGTCGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTTAACGCTTCGTAAAACTAATGCTTCTCTTATCTTCCCATCTAAATCTGGCTCACCTCAGCACCTTTaGATCTGCGGTCACGTCGCT | + |
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Preference number: 2 (lower is better) Translates to: TLTLRKTNASLIFPSKSGSPQHL*ICGHVA Trigger: AGCGACGTGACCGCAGATTCAAAGGTGCTGAGGTGA...GCCAGATTTAGATGGGAAGATAAGAGAAGCATTAGTTTTACGAAGCGTTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR GCA 90 bp | AAACTAACTCCTAGGCCAGAACAACATTCTCTGTCAGAGCTCATAGATACAAAATTGGCCATGGCAGGTTaGTTGGAGGGAGACTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: KLTPRPEQHSLSELIDTKLAMAG*LEGDLS Trigger: ACTCAAGTCTCCCTCCAAGCAACCTGCCATGGCCAA...TTTTGTATCTATGAGCTCTGACAGAGAATGTTGTTCTGGCCTAGGAGTTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTTTAGGAGAGTTCGACACAAAGGCCTGTGACTTGGTTTCGTTCAATTGGTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: KSLGEFDTKACDLVSFNWCSCRR*HRVLSS Trigger: AGATGAAAGAACTCGGTGTCATCTTCTACAACTGCA...CCAATTGAACGAAACCAAGTCACAGGCCTTTGTGTCGAACTCTCCTAAACTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR CCA 90 bp | CACCGACGCATAGACCTTTCCTTTATAATACTGTTAACCAAACAGAAATGTGAATCTCTCACATCTGCCTaGTTGATGACAAGGCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: HRRIDLSFIILLTKQKCESLTSA*LMTRPV Trigger: CACGGGCCTTGTCATCAACCAGGCAGATGTGAGAGA...TTCACATTTCTGTTTGGTTAACAGTATTATAAAGGAAAGGTCTATGCGTCGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR GCA 90 bp | AAACTAACTCCTAGGCCAGAACAACATTCTCTGTCAGAGCTCATAGATACAAAATCCTCTAGTCCTTCCTaGATTTGGTCTGAAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: KLTPRPEQHSLSELIDTKSSSPS*IWSEAL Trigger: CAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGA...TTTTGTATCTATGAGCTCTGACAGAGAATGTTGTTCTGGCCTAGGAGTTAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR-3UTR GCA 90 bp | CACCGACGCATAGACCTTTCCTTTATAATACTGTTAACCAAACAGAAATGTGAAGCAGACTTAATGGCTTaGTGGGTATTAGCAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: HRRIDLSFIILLTKQKCEADLMA*WVLAGA Trigger: TGCCCCTGCTAATACCCAGCAAGCCATTAAGTCTGC...TTCACATTTCTGTTTGGTTAACAGTATTATAAAGGAAAGGTCTATGCGTCGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR-3UTR GCA 90 bp | CACCGACGCATAGACCTTTCCTTTATAATACTGTTAACCAAACAGAAATGTGAATTGACTTCGATGTTTTaGGACGTCAGCTGGAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: HRRIDLSFIILLTKQKCELTSMF*DVSWSN Trigger: GTTGCTCCAGCTGACGTCGCAAAACATCGAAGTCAA...TTCACATTTCTGTTTGGTTAACAGTATTATAAAGGAAAGGTCTATGCGTCGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAGTGCAAATAGCTTTAAGAGACGAGATGAAGTTGAACGTGAGGGGATCAACAAGGGGACAGAAATaGGTGTTTTTCAGAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ISVQIALRDEMKLNVRGSTRGQK*VFFRSL Trigger: AAGACTTCTGAAAAACACTCATTTCTGTCCCCTTGT...TGATCCCCTCACGTTCAACTTCATCTCGTCTCTTAAAGCTATTTGCACTGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR GCA 90 bp | ATGACCTCACAAATGAAAAACATCATGCAGCTGTATCAAAGCACGCGCCCAAACAGGCTTACATCAGCTTaGACATATACATTAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: MTSQMKNIMQLYQSTRPNRLTSA*TYTLKT Trigger: AGTCTTTAATGTATATGTGCAAGCTGATGTAAGCCT...GTTTGGGCGCGTGCTTTGATACAGCTGCATGATGTTTTTCATTTGTGAGGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
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| 3UTR-3UTR GCA 90 bp | AAGACTGATTTCCATTCTGTATACATTCTGGGGAATTCATATCATTTCCCCAAGCTGCCAATGTACACATaGTGTTTGTCCACAATCCAG | + |
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Preference number: 2 (lower is better) Translates to: KTDFHSVYILGNSYHFPKLPMYT*CLSTIQ Trigger: CTGGATTGTGGACAAACAGCATGTGTACATTGGCAG...CTTGGGGAAATGATATGAATTCCCCAGAATGTATACAGAATGGAAATCAGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
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| 3UTR-3UTR TCA 90 bp | TCACCTCATGTTATTCTTCTTAAAACCAGTGCTGATGGGTCAGCAGAAAAGATTACAAGGGGACAGAAATaGGTGTTTTTCAGAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SPHVILLKTSADGSAEKITRGQK*VFFRSL Trigger: AAGACTTCTGAAAAACACTCATTTCTGTCCCCTTGT...AATCTTTTCTGCTGACCCATCAGCACTGGTTTTAAGAAGAATAACATGAGGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| 3UTR GCA 72 bp | AGCGGCTCCCTCCCGGTGGCATTGGCCATGGCAGGTTaGTTGGAGGGAGACTTGAGTTTGGACAGGCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SGSLPVALAMAG*LEGDLSLDRLE Trigger: TTCAAGCCTGTCCAAACTCAAGTCTCCCTCCAAGCAACCTGCCATGGCCAATGCCACCGGGAGGGAGCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR TCA 72 bp | ACTGGGCATAGGCATCTTGACCACTTCCTCTGGCCCTaGAGAGGTCACACCCCTCTCATGTACCAACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TGHRHLDHFLWP*RGHTPLMYQQS Trigger: AGACTGTTGGTACATGAGAGGGGTGTGACCTCTTCAGGGCCAGAGGAAGTGGTCAAGATGCCTATGCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGCACAGAGTCAGGAGCCACACTGGGCATAGGCATCTTGACCACTTCCTCTTGTCAGGGCAGATGCTaGGTTCTGTCTGCATCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSTESGATLGIGILTTSSCQGRC*VLSASS Trigger: AGAAGATGCAGACAGAACCAAGCATCTGCCCTGACA...AGAGGAAGTGGTCAAGATGCCTATGCCCAGTGTGGCTCCTGACTCTGTGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAACCGGGGCCAAAGAGGGAAGGGCTCTGTTCTGAGCACAGAGTCAGGAGCACAAAGGCCTGTGACTaGGTTTCGTTCAATTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RKPGPKREGLCSEHRVRSTKACD*VSFNWS Trigger: GCTCCAATTGAACGAAACCAAGTCACAGGCCTTTGT...GCTCCTGACTCTGTGCTCAGAACAGAGCCCTTCCCTCTTTGGCCCCGGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR TCA 72 bp | AGGCGGTCATGTTCATGTATGTCACCTCAGCACCTTTaGATCTGCGGTCACGTCGCTCACCAGCTTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: RRSCSCMSPQHL*ICGHVAHQLDF Trigger: GAAGTCAAGCTGGTGAGCGACGTGACCGCAGATTCAAAGGTGCTGAGGTGACATACATGAACATGACCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR TCA 72 bp | TGGCATTGGCCATGGCAGGTTGCTTGGAGGGAGACTTaGGTTTGGACAGGCTTGAACAGTTCGGTTGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WHWPWQVAWRET*VWTGLNSSVVW Trigger: CCAAACAACCGAACTGTTCAAGCCTGTCCAAACTCAAGTCTCCCTCCAAGCAACCTGCCATGGCCAATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR GCA 72 bp | GATCGCCAGTCTAAGCCTGCACTGCCAATGTACACATaGTGTTTGTCCACAATCCAGAAGGACGACTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DRQSKPALPMYT*CLSTIQKDDCS Trigger: GCTGCAGTCGTCCTTCTGGATTGTGGACAAACAGCATGTGTACATTGGCAGTGCAGGCTTAGACTGGCGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR GCA 72 bp | CAGTTGCTTAATGATGCTCCTGTTGTCTCTCACATCTaGCTGGTTGATGACAAGGCCCGTGCCAGCGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QLLNDAPVVSHI*LVDDKARASVL Trigger: CAGAACGCTGGCACGGGCCTTGTCATCAACCAGGCAGATGTGAGAGACAACAGGAGCATCATTAAGCAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR CCA 72 bp | TCTGCCTGGTTGATGACAAGGCCCGTGCCAGCGTTCTaGGTAAAGTCATTCCCTACCCAGTCAAAATTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: SAWLMTRPVPAF*VKSFPTQSKFP Trigger: CGGAAATTTTGACTGGGTAGGGAATGACTTTACCCAGAACGCTGGCACGGGCCTTGTCATCAACCAGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR CCA 72 bp | TGCTTAATGATGCTCCTGTTGTCTCTCACATCTGCCTaGTTGATGACAAGGCCCGTGCCAGCGTTCTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: CLMMLLLSLTSA*LMTRPVPAFWV Trigger: TACCCAGAACGCTGGCACGGGCCTTGTCATCAACCAGGCAGATGTGAGAGACAACAGGAGCATCATTAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGAAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATAGAGACGAGATGAAGTaGAACGTGAGGGGATCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GMKWRCLCSAAWIGLREDRDEMK*NVRGSV Trigger: GACTGATCCCCTCACGTTCAACTTCATCTCGTCTCT...ATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCATGTTCATGTATGTCACCTCAGCACCTTTGAATCTGCGGTCACGTCGCTCACTTGACTTCGATGTTTaGCGACGTCAGCTGGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VMFMYVTSAPLNLRSRRSLDFDV*RRQLEQ Trigger: TTGCTCCAGCTGACGTCGCAAAACATCGAAGTCAAG...TGAGCGACGTGACCGCAGATTCAAAGGTGCTGAGGTGACATACATGAACATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR TCA 72 bp | ATCATGCAGCTGTATCAAAGCACGCGCCCAAACACCTaGTCCAAACCTCGATGCAGCTCGATGAACTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: IMQLYQSTRPNT*SKPRCSSMNFY Trigger: GTAGAAGTTCATCGAGCTGCATCGAGGTTTGGATCAGGTGTTTGGGCGCGTGCTTTGATACAGCTGCATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
||
| 3UTR TCA 72 bp | GTAAATCTAGGACCAGGCAGCTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCTGTCCAAGCGATCGCC | + |
|
Preference number: 3 (lower is better) Translates to: VNLGPGSCSCRR*HRVLSSVQAIA Trigger: GGCGATCGCTTGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAGCTGCCTGGTCCTAGATTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR GCA 72 bp | TCATCTGTCCAAGCGATCGCCAGTCTAAGCCTGCACTaGCAATGTACACATGCTGTTTGTCCACAATCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSVQAIASLSLH*QCTHAVCPQSR Trigger: TCTGGATTGTGGACAAACAGCATGTGTACATTGGCAGTGCAGGCTTAGACTGGCGATCGCTTGGACAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR GCA 72 bp | GGCGAATACCAGTCCCTCTCAAACACGTCCTTCAGTTaGTTAATGATGCTCCTGTTGTCTCTCACATCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GEYQSLSNTSFS*LMMLLLSLTSA Trigger: GGCAGATGTGAGAGACAACAGGAGCATCATTAAGCAACTGAAGGACGTGTTTGAGAGGGACTGGTATTCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGAAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATTGTTTTTCAGAAGTCTaGAAGGCTGGCATGAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: GMKWRCLCSAAWIGLREDCFSEV*KAGMKW Trigger: CCATTTCATGCCAGCCTTCAAGACTTCTGAAAAACA...ATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| 3UTR TCA 72 bp | AGGTTGCTTGGAGGGAGACTTGAGTTTGGACAGGCTTaGACAGTTCGGTTGTTTGGTGGGCTGTATGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: RLLGGRLEFGQA*TVRLFGGLYGF Trigger: AAATCCATACAGCCCACCAAACAACCGAACTGTTCAAGCCTGTCCAAACTCAAGTCTCCCTCCAAGCAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR GCA 72 bp | AGTGCTTTATTTTGCCCTCTGGATTCTTCGGGAGAGTaGCTGGTATTGGTGCTACCAGGATACCACAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SALFCPLDSSGE*LVLVLPGYHRD Trigger: ATCTCTGTGGTATCCTGGTAGCACCAATACCAGGCACTCTCCCGAAGAATCCAGAGGGCAAAATAAAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| 3UTR CCA 72 bp | ACAGGCTTGAACAGTTCGGTTGTTTGGTGGGCTGTATaGATTTGGCATAAGGCGAATACCAGTCCCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TGLNSSVVWWAV*IWHKANTSPSQ Trigger: TTGAGAGGGACTGGTATTCGCCTTATGCCAAATCCATACAGCCCACCAAACAACCGAACTGTTCAAGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR GCA 72 bp | CACCAGAAAGTAAGGGAAGGTTCCAAACTGAAAGCGTaGAGGTATGTCCAGCGTCAGAGAATTCAGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HQKVREGSKLKA*RYVQRQRIQSS Trigger: AGAAGACTGAATTCTCTGACGCTGGACATACCTGCACGCTTTCAGTTTGGAACCTTCCCTTACTTTCTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
||
| 3UTR CCA 72 bp | TTGAACAGTTCGGTTGTTTGGTGGGCTGTATGGATTTaGCATAAGGCGAATACCAGTCCCTCTCAAACACGT | + |
|
Preference number: 3 (lower is better) Translates to: LNSSVVWWAVWI*HKANTSPSQTR Trigger: ACGTGTTTGAGAGGGACTGGTATTCGCCTTATGCCAAATCCATACAGCCCACCAAACAACCGAACTGTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCGACGCATAGACCTTTCCTTTATAATACTGTTAACCAAACAGAAATGTGAACTCACATCTGCCTGGTaGATGACAAGGCCCGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HRRIDLSFIILLTKQKCELTSAW*MTRPVP Trigger: TGGCACGGGCCTTGTCATCAACCAGGCAGATGTGAG...TTCACATTTCTGTTTGGTTAACAGTATTATAAAGGAAAGGTCTATGCGTCGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGACCTCACAAATGAAAAACATCATGCAGCTGTATCAAAGCACGCGCCCAAACGTTAGAACAGCTACTTaGAAGCTATGGAGCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: MTSQMKNIMQLYQSTRPNVRTAT*KLWSLA Trigger: AGCCAAGCTCCATAGCTTCAAAGTAGCTGTTCTAAC...GTTTGGGCGCGTGCTTTGATACAGCTGCATGATGTTTTTCATTTGTGAGGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
||
| 3UTR TCA 72 bp | GCAAAAGAGTTTAGGAGAGTTCGACACAAAGGCCTGTaGCTTGGTTTCGTTCAATTGGAGCTGAAGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AKEFRRVRHKGL*LGFVQLELKLL Trigger: AAGAAGCTTCAGCTCCAATTGAACGAAACCAAGTCACAGGCCTTTGTGTCGAACTCTCCTAAACTCTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR CCA 72 bp | TGTTTGTCAGAAGACAGACTGATACCCTCAAAACCCTaGTATCAGAAGACAAGGAACAAGGGGACAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: CLSEDRLIPSKP*YQKTRNKGTEM Trigger: CATTTCTGTCCCCTTGTTCCTTGTCTTCTGATACCAGGGTTTTGAGGGTATCAGTCTGTCTTCTGACAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| 3UTR TCA 72 bp | ATATCGCCTACCATGACAGCATCCTTGCGAGGTAGGTaGGGATTATTGTCTACATTAACAATAGAAAACCGG | + |
|
Preference number: 3 (lower is better) Translates to: ISPTMTASLRGR*GLLSTLTIENR Trigger: CCGGTTTTCTATTGTTAATGTAGACAATAATCCTCACCTACCTCGCAAGGATGCTGTCATGGTAGGCGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTCATGTTATTCTTCTTAAAACCAGTGCTGATGGGTCAGCAGAAAAGATTATGTACACATGCTGTTaGTCCACAATCCAGAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SPHVILLKTSADGSAEKIMYTCC*STIQKD Trigger: GTCCTTCTGGATTGTGGACAAACAGCATGTGTACAT...AATCTTTTCTGCTGACCCATCAGCACTGGTTTTAAGAAGAATAACATGAGGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR TCA 72 bp | GATGTAAAACAAGAACATGTTTGTCAGAAGACAGACTaGTACCCTCAAAACCCTGGTATCAGAAGACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DVKQEHVCQKTD*YPQNPGIRRQG Trigger: TCCTTGTCTTCTGATACCAGGGTTTTGAGGGTATCAGTCTGTCTTCTGACAAACATGTTCTTGTTTTACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| 3UTR CCA 72 bp | ATAGTAAGAAGGAGTAGGGAAAATACAAAACAAGCTTaGAGAACTCTGGTACACCAGAAAGTAAGGGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: IVRRSRENTKQA*RTLVHQKVREG Trigger: ACCTTCCCTTACTTTCTGGTGTACCAGAGTTCTCCAAGCTTGTTTTGTATTTTCCCTACTCCTTCTTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
||
| 3UTR TCA 72 bp | TTGATTTCAAAAACAACTTATAAATATCGCCTACCATaGCAGCATCCTTGCGAGGTAGGTGAGGATTATTGT | + |
|
Preference number: 3 (lower is better) Translates to: LISKTTYKYRLP*QHPCEVGEDYC Trigger: ACAATAATCCTCACCTACCTCGCAAGGATGCTGTCATGGTAGGCGATATTTATAAGTTGTTTTTGAAATCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| 3UTR CAA 72 bp | GGCTCCCTCCCGGTGGCATTGGCCATGGCAGGTTGCTaGGAGGGAGACTTGAGTTTGGACAGGCTTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLPVALAMAGC*EGDLSLDRLEQ Trigger: CTGTTCAAGCCTGTCCAAACTCAAGTCTCCCTCCAAGCAACCTGCCATGGCCAATGCCACCGGGAGGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| 3UTR CAA 72 bp | AGCACAGAGTCAGGAGCCACACTGGGCATAGGCATCTaGACCACTTCCTCTGGCCCTGAAGAGGTCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: STESGATLGIGI*TTSSGPEEVTP Trigger: GGGTGTGACCTCTTCAGGGCCAGAGGAAGTGGTCAAGATGCCTATGCCCAGTGTGGCTCCTGACTCTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCACAGAGTCAGGAGCCACACTGGGCATAGGCATCTTGACCACTTCCTCTCCCGTGCCAGCGTTCTaGGTAAAGTCATTCCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: LSTESGATLGIGILTTSSPVPAF*VKSFPT Trigger: GGTAGGGAATGACTTTACCCAGAACGCTGGCACGGG...AGAGGAAGTGGTCAAGATGCCTATGCCCAGTGTGGCTCCTGACTCTGTGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| 3UTR CAA 72 bp | CAGTCTAAGCCTGCACTGCCAATGTACACATGCTGTTaGTCCACAATCCAGAAGGACGACTGCAGCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSKPALPMYTCC*STIQKDDCSRP Trigger: GGGCCGGCTGCAGTCGTCCTTCTGGATTGTGGACAAACAGCATGTGTACATTGGCAGTGCAGGCTTAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGAAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATCTTTTCAACCTCATCTaGTCGAAGCCCTCGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GMKWRCLCSAAWIGLREDLFNLI*SKPSWG Trigger: CCCCCACGAGGGCTTCGAGCAGATGAGGTTGAAAAG...ATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTTTATTTTGCCCTCTGGATTCTTCGGGAGAGTGCCTGGTATTGGTGCTACTTCGGAGCCAGACGCTaGCGCTGTAGTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYFALWILRESAWYWCYFGARR*RCSPAA Trigger: AGCAGCAGGACTACAGCGCCAGCGTCTGGCTCCGAA...GTAGCACCAATACCAGGCACTCTCCCGAAGAATCCAGAGGGCAAAATAAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR TCA 90 bp | AGAAAACCGGGGCCAAAGAGGGAAGGGCTCTGTTCTGAGCACAGAGTCAGGAGCGAGTTTGGACAGGCTTaGACAGTTCGGTTGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKPGPKREGLCSEHRVRSEFGQA*TVRLFG Trigger: ACCAAACAACCGAACTGTTCAAGCCTGTCCAAACTC...GCTCCTGACTCTGTGCTCAGAACAGAGCCCTTCCCTCTTTGGCCCCGGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR GCA 90 bp | GGCATGAAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATACGTTGACCCTGACATaGAGCTGGGTGTGTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GMKWRCLCSAAWIGLREDTLTLT*SWVCVV Trigger: AACCACACACACCCAGCTGCATGTCAGGGTCAACGT...ATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTTGCTCGAAGCCCTCGTaGGGGGAGGCCGAGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCCSKPS*GEAESH Trigger: GTGGCTCTCGGCCTCCCCCCACGAGGGCTTCGAGCA...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAACCGGGGCCAAAGAGGGAAGGGCTCTGTTCTGAGCACAGAGTCAGGAGCACGATGCACTTCTGCTaGGAGTGTTCCAGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RKPGPKREGLCSEHRVRSTMHFC*ECSSLS Trigger: AGATAAACTGGAACACTCTCAGCAGAAGTGCATCGT...GCTCCTGACTCTGTGCTCAGAACAGAGCCCTTCCCTCTTTGGCCCCGGTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCCTCTGGATTCTTCGGGAGAGTGCCTGGTATTGGTGCTACCAGGATACTTGGCCATGGCAGGTTaGTTGGAGGGAGACTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FCPLDSSGECLVLVLPGYLAMAG*LEGDLS Trigger: ACTCAAGTCTCCCTCCAAGCAACCTGCCATGGCCAA...GTATCCTGGTAGCACCAATACCAGGCACTCTCCCGAAGAATCCAGAGGGCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CCA 90 bp | AAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATATGTCAACCCTGACATGCAGCTaGGTGTGTGTGGTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KWRCLCSAAWIGLREDMSTLTCS*VCVVEV Trigger: GACCTCAACCACACACACCCAGCTGCATGTCAGGGT...TGACATATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CCA 90 bp | AGAAAACCGGGGCCAAAGAGGGAAGGGCTCTGTTCTGAGCACAGAGTCAGGAGCTTTTGCGACGTCAGCTaGAGCAACTTCTCAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKPGPKREGLCSEHRVRSFCDVS*SNFSKR Trigger: TCTCTTTGAGAAGTTGCTCCAGCTGACGTCGCAAAA...GCTCCTGACTCTGTGCTCAGAACAGAGCCCTTCCCTCTTTGGCCCCGGTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR TCA 90 bp | AGAAAACCGGGGCCAAAGAGGGAAGGGCTCTGTTCTGAGCACAGAGTCAGGAGCTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RKPGPKREGLCSEHRVRSCSCRR*HRVLSS Trigger: AGATGAAAGAACTCGGTGTCATCTTCTACAACTGCA...GCTCCTGACTCTGTGCTCAGAACAGAGCCCTTCCCTCTTTGGCCCCGGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCCTCTGGATTCTTCGGGAGAGTGCCTGGTATTGGTGCTACCAGGATACCGACACAAAGGCCTGTaGCTTGGTTTCGTTCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: FCPLDSSGECLVLVLPGYRHKGL*LGFVQL Trigger: CAATTGAACGAAACCAAGTCACAGGCCTTTGTGTCG...GTATCCTGGTAGCACCAATACCAGGCACTCTCCCGAAGAATCCAGAGGGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CCA 90 bp | ATCATAGTAAGAAGGAGTAGGGAAAATACAAAACAAGCTTGGAGAACTCTGGTATGCTCGAAGCCCTCGTaGGGGGAGGCCGAGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IIVRRSRENTKQAWRTLVCSKPS*GEAESH Trigger: GTGGCTCTCGGCCTCCCCCCACGAGGGCTTCGAGCA...TACCAGAGTTCTCCAAGCTTGTTTTGTATTTTCCCTACTCCTTCTTACTATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
||
| CDS-3UTR CCA 90 bp | AAGACTGATTTCCATTCTGTATACATTCTGGGGAATTCATATCATTTCCCCAAGTGCTCGAAGCCCTCGTaGGGGGAGGCCGAGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KTDFHSVYILGNSYHFPKCSKPS*GEAESH Trigger: GTGGCTCTCGGCCTCCCCCCACGAGGGCTTCGAGCA...CTTGGGGAAATGATATGAATTCCCCAGAATGTATACAGAATGGAAATCAGTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCGGTGGCATTGGCCATaGCAGGTTGCTTGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCRWHWP*QVAWRE Trigger: CTCCCTCCAAGCAACCTGCCATGGCCAATGCCACCG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGCACAGAGTCAGGAGCCACACTGGGCATAGGCATCTTGACCACTTCCTCTTCACCATGTACTTGTTaGGGTTTAATTTGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTESGATLGIGILTTSSSPCTC*GLIWER Trigger: CCTTTCCCAAATTAAACCGCAACAAGTACATGGTGA...AGAGGAAGTGGTCAAGATGCCTATGCCCAGTGTGGCTCCTGACTCTGTGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CCA 90 bp | CACCTCATGTTATTCTTCTTAAAACCAGTGCTGATGGGTCAGCAGAAAAGATTCTTCGGAGCCAGACGCTaGCGCTGTAGTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLMLFFLKPVLMGQQKRFFGARR*RCSPAA Trigger: AGCAGCAGGACTACAGCGCCAGCGTCTGGCTCCGAA...GAATCTTTTCTGCTGACCCATCAGCACTGGTTTTAAGAAGAATAACATGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| 3UTR CAA 72 bp | TCAAACACGTCCTTCAGTTGCTTAATGATGCTCCTGTaGTCTCTCACATCTGCCTGGTTGATGACAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNTSFSCLMMLL*SLTSAWLMTRP Trigger: GGGCCTTGTCATCAACCAGGCAGATGTGAGAGACAACAGGAGCATCATTAAGCAACTGAAGGACGTGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| CDS-3UTR GCA 90 bp | TGGATAGGTCTTAGAGAGGATATGTCAGGGCAGATGCTTGGTTCTGTCTGCATCTTGACTTCGATGTTTTaGGACGTCAGCTGGAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WIGLREDMSGQMLGSVCILTSMF*DVSWSN Trigger: GTTGCTCCAGCTGACGTCGCAAAACATCGAAGTCAA...GATGCAGACAGAACCAAGCATCTGCCCTGACATATCCTCTCTAAGACCTATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTACCCTGACATGCAGCTaGGTGTGTGTGGTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCTLTCS*VCVVEV Trigger: GACCTCAACCACACACACCCAGCTGCATGTCAGGGT...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR CCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCCCGTGCCAGCGTTCTaGGTAAAGTCATTCCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCPVPAF*VKSFPT Trigger: GGTAGGGAATGACTTTACCCAGAACGCTGGCACGGG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR CCA 90 bp | AAACTAACTCCTAGGCCAGAACAACATTCTCTGTCAGAGCTCATAGATACAAAACGGTGGCATTGGCCATaGCAGGTTGCTTGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLTPRPEQHSLSELIDTKRWHWP*QVAWRE Trigger: CTCCCTCCAAGCAACCTGCCATGGCCAATGCCACCG...TTTTGTATCTATGAGCTCTGACAGAGAATGTTGTTCTGGCCTAGGAGTTAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR GCA 90 bp | TTCTTCGGGAGAGTGCCTGGTATTGGTGCTACCAGGATACCACAGAGATTATTTGAGCGAAGATCACGATaGACTTCTGCTGAGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFGRVPGIGATRIPQRLFERRSR*TSAESV Trigger: AACACTCTCAGCAGAAGTGCATCGTGATCTTCGCTC...AAATAATCTCTGTGGTATCCTGGTAGCACCAATACCAGGCACTCTCCCGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR GCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTACGTTGACCCTGACATaGAGCTGGGTGTGTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCTLTLT*SWVCVV Trigger: AACCACACACACCCAGCTGCATGTCAGGGTCAACGT...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR GCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTTTGGCCATGGCAGGTTaGTTGGAGGGAGACTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCLAMAG*LEGDLS Trigger: ACTCAAGTCTCCCTCCAAGCAACCTGCCATGGCCAA...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR CCA 90 bp | AAACTAACTCCTAGGCCAGAACAACATTCTCTGTCAGAGCTCATAGATACAAAATGGGCGAGGGTTCCTTaGGGCGGCTTTTCAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLTPRPEQHSLSELIDTKWARVP*GGFSTS Trigger: TGAGGTTGAAAAGCCGCCCCAAGGAACCCTCGCCCA...TTTTGTATCTATGAGCTCTGACAGAGAATGTTGTTCTGGCCTAGGAGTTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTGCACATATACATTAAAGACTAGAATCAGTTCTAAAGATGCTTCAGCCTTCGGAGCCAGACGCTaGCGCTGTAGTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SACTYTLKTRISSKDASAFGARR*RCSPAA Trigger: AGCAGCAGGACTACAGCGCCAGCGTCTGGCTCCGAA...GGCTGAAGCATCTTTAGAACTGATTCTAGTCTTTAATGTATATGTGCAAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
||
| CDS-3UTR CCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTTCTCTCACATCTGCCTaGTTGATGACAAGGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCSLTSA*LMTRPV Trigger: CACGGGCCTTGTCATCAACCAGGCAGATGTGAGAGA...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| 3UTR CAA 72 bp | GAACAAGGGGACAGAAATGAGTGTTTTTCAGAAGTCTaGAAGGCTGGCATGAAATGGAGGTGCCTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQGDRNECFSEV*KAGMKWRCLCS Trigger: TGAGCACAGGCACCTCCATTTCATGCCAGCCTTCAAGACTTCTGAAAAACACTCATTTCTGTCCCCTTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| 3UTR CAA 72 bp | TTTTGCCCTCTGGATTCTTCGGGAGAGTGCCTGGTATaGGTGCTACCAGGATACCACAGAGATTATTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FCPLDSSGECLV*VLPGYHRDYFK Trigger: CTTGAAATAATCTCTGTGGTATCCTGGTAGCACCAATACCAGGCACTCTCCCGAAGAATCCAGAGGGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CCA 90 bp | TTAAAGACTAGAATCAGTTCTAAAGATGCTTCAGCCTCATCAGAACATGTCCATTGGGCGAGGGTTCCTTaGGGCGGCTTTTCAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKTRISSKDASASSEHVHWARVP*GGFSTS Trigger: TGAGGTTGAAAAGCCGCCCCAAGGAACCCTCGCCCA...ATGGACATGTTCTGATGAGGCTGAAGCATCTTTAGAACTGATTCTAGTCTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
||
| CDS-3UTR CCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCTCCATAGAGTCTCTTaGACCAGGTCTGAGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCLHRVS*TRSEVL Trigger: GAGTACCTCAGACCTGGTCCAAGAGACTCTATGGAG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR CCA 90 bp | TGGATAGGTCTTAGAGAGGATATGTCAGGGCAGATGCTTGGTTCTGTCTGCATCCAATCACACTGTAGATaGCATCGATGTCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WIGLREDMSGQMLGSVCIQSHCR*HRCQSF Trigger: GAAGCTTTGACATCGATGCCATCTACAGTGTGATTG...GATGCAGACAGAACCAAGCATCTGCCCTGACATATCCTCTCTAAGACCTATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR TCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCGACACAAAGGCCTGTaGCTTGGTTTCGTTCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCRHKGL*LGFVQL Trigger: CAATTGAACGAAACCAAGTCACAGGCCTTTGTGTCG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR TCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTGAGTTTGGACAGGCTTaGACAGTTCGGTTGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCEFGQA*TVRLFG Trigger: ACCAAACAACCGAACTGTTCAAGCCTGTCCAAACTC...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAGACTAGAATCAGTTCTAAAGATGCTTCAGCCTCATCAGAACATGTCCATCTTTTCAACCTCATCTaGTCGAAGCCCTCGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKTRISSKDASASSEHVHLFNLI*SKPSWG Trigger: CCCCCACGAGGGCTTCGAGCAGATGAGGTTGAAAAG...ATGGACATGTTCTGATGAGGCTGAAGCATCTTTAGAACTGATTCTAGTCTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
||
| CDS-3UTR GCA 90 bp | CACCGACGCATAGACCTTTCCTTTATAATACTGTTAACCAAACAGAAATGTGAACTTTTCAACCTCATCTaGTCGAAGCCCTCGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRRIDLSFIILLTKQKCELFNLI*SKPSWG Trigger: CCCCCACGAGGGCTTCGAGCAGATGAGGTTGAAAAG...TTCACATTTCTGTTTGGTTAACAGTATTATAAAGGAAAGGTCTATGCGTCGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR GCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTTTGACTTCGATGTTTTaGGACGTCAGCTGGAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCLTSMF*DVSWSN Trigger: GTTGCTCCAGCTGACGTCGCAAAACATCGAAGTCAA...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTTTATTTTGCCCTCTGGATTCTTCGGGAGAGTGCCTGGTATTGGTGCTACCTTTTGTTCTTTCGTTaGACAAGCATTCTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLYFALWILRESAWYWCYLLFFR*TSILSF Trigger: GAAAGAGAGAATGCTTGTGCAACGAAAGAACAAAAG...GTAGCACCAATACCAGGCACTCTCCCGAAGAATCCAGAGGGCAAAATAAAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR TCA 90 bp | AAACTAACTCCTAGGCCAGAACAACATTCTCTGTCAGAGCTCATAGATACAAAACTCTTGGACCAGGTCTaGGGTACTCTGCTCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLTPRPEQHSLSELIDTKLLDQV*GTLLLN Trigger: ATTCAAGAGCAGAGTACCTCAGACCTGGTCCAAGAG...TTTTGTATCTATGAGCTCTGACAGAGAATGTTGTTCTGGCCTAGGAGTTAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR GCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCTGCCAATGTACACATaGTGTTTGTCCACAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCLPMYT*CLSTIQ Trigger: CTGGATTGTGGACAAACAGCATGTGTACATTGGCAG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR CCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTTTTTGCGACGTCAGCTaGAGCAACTTCTCAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCFCDVS*SNFSKR Trigger: TCTCTTTGAGAAGTTGCTCCAGCTGACGTCGCAAAA...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR CCA 90 bp | AAACTAACTCCTAGGCCAGAACAACATTCTCTGTCAGAGCTCATAGATACAAAACTCCATAGAGTCTCTTaGACCAGGTCTGAGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: KLTPRPEQHSLSELIDTKLHRVS*TRSEVL Trigger: GAGTACCTCAGACCTGGTCCAAGAGACTCTATGGAG...TTTTGTATCTATGAGCTCTGACAGAGAATGTTGTTCTGGCCTAGGAGTTAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| 3UTR CAA 72 bp | ATTTCAGTGCAAATAGCTTTAAGAGACGAGATGAAGTaGAACGTGAGGGGATCAGTCTCCTTCCAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISVQIALRDEMK*NVRGSVSFQKL Trigger: AAGCTTCTGGAAGGAGACTGATCCCCTCACGTTCAACTTCATCTCGTCTCTTAAAGCTATTTGCACTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| CDS-3UTR TCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCCSCRR*HRVLSS Trigger: AGATGAAAGAACTCGGTGTCATCTTCTACAACTGCA...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR GCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTAACACGTCCTTCAGTTaGTTAATGATGCTCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCNTSFS*LMMLLL Trigger: CAACAGGAGCATCATTAAGCAACTGAAGGACGTGTT...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR CCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCAATCACACTGTAGATaGCATCGATGTCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCQSHCR*HRCQSF Trigger: GAAGCTTTGACATCGATGCCATCTACAGTGTGATTG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR TCA 90 bp | AAACTAACTCCTAGGCCAGAACAACATTCTCTGTCAGAGCTCATAGATACAAAAACGATGCACTTCTGCTaGGAGTGTTCCAGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLTPRPEQHSLSELIDTKTMHFC*ECSSLS Trigger: AGATAAACTGGAACACTCTCAGCAGAAGTGCATCGT...TTTTGTATCTATGAGCTCTGACAGAGAATGTTGTTCTGGCCTAGGAGTTAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTAACGCTTCGTAAAACTAATGCTTCTCTTATCTTCCCATCTAAATCTGGCGAGCGAAGATCACGATaGACTTCTGCTGAGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLTLRKTNASLIFPSKSGERRSR*TSAESV Trigger: AACACTCTCAGCAGAAGTGCATCGTGATCTTCGCTC...GCCAGATTTAGATGGGAAGATAAGAGAAGCATTAGTTTTACGAAGCGTTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125404.8 |
||
| CDS-3UTR GCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTTCACCATGTACTTGTTaGGGTTTAATTTGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCSPCTC*GLIWER Trigger: CCTTTCCCAAATTAAACCGCAACAAGTACATGGTGA...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| CDS-3UTR GCA 90 bp | CACCGACGCATAGACCTTTCCTTTATAATACTGTTAACCAAACAGAAATGTGAACTGCCAATGTACACATaGTGTTTGTCCACAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRRIDLSFIILLTKQKCELPMYT*CLSTIQ Trigger: CTGGATTGTGGACAAACAGCATGTGTACATTGGCAG...TTCACATTTCTGTTTGGTTAACAGTATTATAAAGGAAAGGTCTATGCGTCGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR GCA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCTTTTGTTCTTTCGTTaGACAAGCATTCTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VNCCLSSSPSCIWSEALCLLFFR*TSILSF Trigger: GAAAGAGAGAATGCTTGTGCAACGAAAGAACAAAAG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
||
| 3UTR CAA 72 bp | GAAACTGCTTTATTCTTCAAATGCAGACTTAATGGCTaGCTGGGTATTAGCAGGGGCACTTCATTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETALFFKCRLNG*LGISRGTSFLF Trigger: AAAAAGAAATGAAGTGCCCCTGCTAATACCCAGCAAGCCATTAAGTCTGCATTTGAAGAATAAAGCAGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTGCAGGTATGTCCAGCGTCAGAGAATTCAGTCTTCTGCAGGTCTCCAACGCTGGGCGAGGGTTCCTaGGGGCGGCTTTTCAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVQVCPASENSVFCRSPTLGEGS*GRLFNL Trigger: GAGGTTGAAAAGCCGCCCCAAGGAACCCTCGCCCAG...CGTTGGAGACCTGCAGAAGACTGAATTCTCTGACGCTGGACATACCTGCACGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111166.2 |
||
| CDS GCA 90 bp | GAGCGACCAGAACGGCGAAGCAGCAGACCAGAGCGAAGATCACGATaGACTTCTGCTGAGAGTGTTCCAGTTTATCTTTCCTTCGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ERPERRSSRPERRSR*TSAESVPVYLSFGA Trigger: GGCTCCGAAGGAAAGATAAACTGGAACACTCTCAGCAGAAGTGCATCGTGATCTTCGCTCTGGTCTGCTGCTTCGCCGTTCTGGTCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCGGGAGAGTGCCTGGTATTGGTGCTACCAGGATACCACAGAGATTATTTCTGGGCGAGGGTTCCTaGGGGCGGCTTTTCAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFGRVPGIGATRIPQRLFLGEGS*GRLFNL Trigger: GAGGTTGAAAAGCCGCCCCAAGGAACCCTCGCCCAG...AAATAATCTCTGTGGTATCCTGGTAGCACCAATACCAGGCACTCTCCCGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CAA 90 bp | TGGATAGGTCTTAGAGAGGATATGTCAGGGCAGATGCTTGGTTCTGTCTGCATCCTCACATCTGCCTGGTaGATGACAAGGCCCGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WIGLREDMSGQMLGSVCILTSAW*MTRPVP Trigger: TGGCACGGGCCTTGTCATCAACCAGGCAGATGTGAG...GATGCAGACAGAACCAAGCATCTGCCCTGACATATCCTCTCTAAGACCTATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CAA 90 bp | GTGCTTTATTTTGCCCTCTGGATTCTTCGGGAGAGTGCCTGGTATTGGTGCTACCTTGACTTCGATGTTTaGCGACGTCAGCTGGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLYFALWILRESAWYWCYLDFDV*RRQLEQ Trigger: TTGCTCCAGCTGACGTCGCAAAACATCGAAGTCAAG...GTAGCACCAATACCAGGCACTCTCCCGAAGAATCCAGAGGGCAAAATAAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
||
| CDS-3UTR CAA 90 bp | AAACTAACTCCTAGGCCAGAACAACATTCTCTGTCAGAGCTCATAGATACAAAACTGGGCGAGGGTTCCTaGGGGCGGCTTTTCAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: KLTPRPEQHSLSELIDTKLGEGS*GRLFNL Trigger: GAGGTTGAAAAGCCGCCCCAAGGAACCCTCGCCCAG...TTTTGTATCTATGAGCTCTGACAGAGAATGTTGTTCTGGCCTAGGAGTTAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000125404.8 |
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| CDS-3UTR CAA 90 bp | TTTTCAGAAGTCTTGAAGGCTGGCATGAAATGGAGGTGCCTGTGCTCAGCTGCCCTTGGTTTCGTTCAATaGGAGCTGAAGCTTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: FSEVLKAGMKWRCLCSAALGFVQ*ELKLLL Trigger: GAGAAGAAGCTTCAGCTCCAATTGAACGAAACCAAG...GGCAGCTGAGCACAGGCACCTCCATTTCATGCCAGCCTTCAAGACTTCTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCTCACATCTGCCTGGTaGATGACAAGGCCCGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCLTSAW*MTRPVP Trigger: TGGCACGGGCCTTGTCATCAACCAGGCAGATGTGAG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | CCCTCAAAACCCTGGTATCAGAAGACAAGGAACAAGGGGACAGAAATGAGTGTTAGAGACGAGATGAAGTaGAACGTGAGGGGATCAGTC | + |
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Preference number: 5 (lower is better) Translates to: PSKPWYQKTRNKGTEMSVRDEMK*NVRGSV Trigger: GACTGATCCCCTCACGTTCAACTTCATCTCGTCTCT...AACACTCATTTCTGTCCCCTTGTTCCTTGTCTTCTGATACCAGGGTTTTGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| CDS-3UTR CAA 90 bp | GGCATGAAATGGAGGTGCCTGTGCTCAGCTGCCTGGATAGGTCTTAGAGAGGATAAAGGTCTGATTCTTTaGTTCTTTCGTTGCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: GMKWRCLCSAAWIGLREDKGLIL*FFRCTS Trigger: GCTTGTGCAACGAAAGAACAAAAGAATCAGACCTTT...ATCCTCTCTAAGACCTATCCAGGCAGCTGAGCACAGGCACCTCCATTTCATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTGCCATGGCAGGTTGCTaGGAGGGAGACTTGAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCAMAGC*EGDLSL Trigger: CAAACTCAAGTCTCCCTCCAAGCAACCTGCCATGGC...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCTTGACTTCGATGTTTaGCGACGTCAGCTGGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCLDFDV*RRQLEQ Trigger: TTGCTCCAGCTGACGTCGCAAAACATCGAAGTCAAG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTAGAGACGAGATGAAGTaGAACGTGAGGGGATCAGTC | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCRDEMK*NVRGSV Trigger: GACTGATCCCCTCACGTTCAACTTCATCTCGTCTCT...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTACAAAGGCCTGTGACTaGGTTTCGTTCAATTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCTKACD*VSFNWS Trigger: GCTCCAATTGAACGAAACCAAGTCACAGGCCTTTGT...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | TTCTTCGGGAGAGTGCCTGGTATTGGTGCTACCAGGATACCACAGAGATTATTTTCTGTCACCATGTACTaGTTGCGGTTTAATTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: FFGRVPGIGATRIPQRLFSVTMY*LRFNLG Trigger: TCCCAAATTAAACCGCAACAAGTACATGGTGACAGA...AAATAATCTCTGTGGTATCCTGGTAGCACCAATACCAGGCACTCTCCCGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTTTAATGATGCTCCTGTaGTCTCTCACATCTGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCLMMLL*SLTSAW Trigger: CCAGGCAGATGTGAGAGACAACAGGAGCATCATTAA...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | CACCGACGCATAGACCTTTCCTTTATAATACTGTTAACCAAACAGAAATGTGAAGCCATGGCAGGTTGCTaGGAGGGAGACTTGAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: HRRIDLSFIILLTKQKCEAMAGC*EGDLSL Trigger: CAAACTCAAGTCTCCCTCCAAGCAACCTGCCATGGC...TTCACATTTCTGTTTGGTTAACAGTATTATAAAGGAAAGGTCTATGCGTCGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTATGTACACATGCTGTTaGTCCACAATCCAGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCMYTCC*STIQKD Trigger: GTCCTTCTGGATTGTGGACAAACAGCATGTGTACAT...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTCTTGGTTTCGTTCAATaGGAGCTGAAGCTTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCLGFVQ*ELKLLL Trigger: GAGAAGAAGCTTCAGCTCCAATTGAACGAAACCAAG...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | CCCTCAAAACCCTGGTATCAGAAGACAAGGAACAAGGGGACAGAAATGAGTGTTACTTTCAAACTGCAGTaGGCTATTTCAGTGCAAATA | + |
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Preference number: 5 (lower is better) Translates to: PSKPWYQKTRNKGTEMSVTFKLQ*AISVQI Trigger: TATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGT...AACACTCATTTCTGTCCCCTTGTTCCTTGTCTTCTGATACCAGGGTTTTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTGTCACCATGTACTTGTaGCGGTTTAATTTGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCVTMYL*RFNLGK Trigger: CTTTCCCAAATTAAACCGCAACAAGTACATGGTGAC...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTTCTGTCACCATGTACTaGTTGCGGTTTAATTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCSVTMY*LRFNLG Trigger: TCCCAAATTAAACCGCAACAAGTACATGGTGACAGA...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | TCACCTCATGTTATTCTTCTTAAAACCAGTGCTGATGGGTCAGCAGAAAAGATTTTAATGATGCTCCTGTaGTCTCTCACATCTGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPHVILLKTSADGSAEKILMMLL*SLTSAW Trigger: CCAGGCAGATGTGAGAGACAACAGGAGCATCATTAA...AATCTTTTCTGCTGACCCATCAGCACTGGTTTTAAGAAGAATAACATGAGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTAAAGGTCTGATTCTTTaGTTCTTTCGTTGCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCKGLIL*FFRCTS Trigger: GCTTGTGCAACGAAAGAACAAAAGAATCAGACCTTT...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | GTAAATTGTTGTCTTTCCTCTAGTCCTTCCTGCATTTGGTCTGAAGCCTTGTGTACTTTCAAACTGCAGTaGGCTATTTCAGTGCAAATA | + |
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Preference number: 5 (lower is better) Translates to: VNCCLSSSPSCIWSEALCTFKLQ*AISVQI Trigger: TATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGT...ACACAAGGCTTCAGACCAAATGCAGGAAGGACTAGAGGAAAGACAACAATTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065967.14 ENSMUST00000111167.2 |
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| CDS-3UTR CAA 90 bp | TCACCTCATGTTATTCTTCTTAAAACCAGTGCTGATGGGTCAGCAGAAAAGATTGTCACCATGTACTTGTaGCGGTTTAATTTGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SPHVILLKTSADGSAEKIVTMYL*RFNLGK Trigger: CTTTCCCAAATTAAACCGCAACAAGTACATGGTGAC...AATCTTTTCTGCTGACCCATCAGCACTGGTTTTAAGAAGAATAACATGAGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065967.14 |
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| CDS CCA 72 bp | GGGCGGCTTTTCAACCTCATCTGCTCGAAGCCCTCGTaGGGGGAGGCCGAGAGCCACTCGTGCTGCCGGATC | + |
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Preference number: 6 (lower is better) Translates to: GRLFNLICSKPS*GEAESHSCCRI Trigger: GATCCGGCAGCACGAGTGGCTCTCGGCCTCCCCCCACGAGGGCTTCGAGCAGATGAGGTTGAAAAGCCGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065967.14 ENSMUST00000111166.2 ENSMUST00000125404.8 |
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| CDS CCA 72 bp | TCGCGCCCACTCGGGTCAGGCTGGGCGAGGGTTCCTTaGGGCGGCTTTTCAACCTCATCTGCTCGAAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SRPLGSGWARVP*GGFSTSSARSP Trigger: AGGGCTTCGAGCAGATGAGGTTGAAAAGCCGCCCCAAGGAACCCTCGCCCAGCCTGACCCGAGTGGGCGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065967.14 ENSMUST00000111166.2 ENSMUST00000125404.8 |
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