Pregenerated sensors for PLD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052160Ensembl transcript IDs: ENSMUST00000063888.5
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCGGAAGCTGTTTGTCTGATGACAATCTCGGGCCCTCAGTGGTaGTCCTTTGCTTGCTTGGTTTCTGAGCTTGGGCAGATGGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: LPEAVCLMTISGPQW*SFACLVSELGQMEV Trigger: GACTTCCATCTGCCCAAGCTCAGAAACCAAGCAAGCAAAGGATCACCACTGAGGGCCCGAGATTGTCATCAGACAAACAGCTTCCGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR CCA 90 bp | CTCAGTGGTGATCCTTTGCTTGCTTGGTTTCTGAGCTTGGGCAGATaGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: LSGDPLLAWFLSLGR*KSGEHQCPSRAVGQ Trigger: CTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCCCAAGCTCAGAAACCAAGCAAGCAAAGGATCACCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR CAA 90 bp | TCTCGGGCCCTCAGTGGTGATCCTTTGCTTGCTTGGTTTCTGAGCTaGGGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: SRALSGDPLLAWFLS*GRWKSGEHQCPSRA Trigger: AGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCCCAAGCTCAGAAACCAAGCAAGCAAAGGATCACCACTGAGGGCCCGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR CAA 90 bp | CCACTTTTGACCTGGGTCAGGTCAGTAGCTGGTGGCAGGGTTTTATaGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: PLLTWVRSVAGGRVL*WLDSTNITSGNGPS Trigger: GCTAGGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCACCAGCTACTGACCTGACCCAGGTCAAAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCCGTGGTGCCTCCCTCTaGTTTAGCCTCTTCTTCGTT | + |
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Preference number: 2 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPRGASL*FSLFFV Trigger: AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACG...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR-3UTR CCA 90 bp | TTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTAGCAACTCACTGAGCTTGGGCAGATaGAAGTCTGGGGAGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: LLWLDSTNITSGNGPSNSLSLGR*KSGEHQ Trigger: CTGATGCTCCCCAGACTTCCATCTGCCCAAGCTCAG...TGAGTTGCTAGGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCGACCAGGGAGGGTTCTaGGGGTCACTTATATGTAGT | + |
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Preference number: 2 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPDQGGF*GSLICS Trigger: ACTACATATAAGTGACCCCCAGAACCCTCCCTGGTC...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR-3UTR TCA 90 bp | TTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTAGCAACTCATGCTTGCTTGGTTTCTaGGCTTGGGCAGATGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: LLWLDSTNITSGNGPSNSCLLGF*AWADGS Trigger: ACTTCCATCTGCCCAAGCTCAGAAACCAAGCAAGCA...TGAGTTGCTAGGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR-3UTR CAA 90 bp | GGTCACTTATATGTAGTTGCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCGCTTGGTTTCTGAGCTaGGGCAGATGGAAGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: GHLYVVAVFPCHRGASLCAWFLS*GRWKSG Trigger: CCCAGACTTCCATCTGCCCAAGCTCAGAAACCAAGC...GCAGAGGGAGGCACCACGGTGACATGGGAAGACAGCAACTACATATAAGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR CCA 72 bp | GATCCTTTGCTTGCTTGGTTTCTGAGCTTGGGCAGATaGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: DPLLAWFLSLGR*KSGEHQCPSRA Trigger: AGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCCCAAGCTCAGAAACCAAGCAAGCAAAGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATTCCCGGGTCCGGCCATaGGGGCAGAGGGAGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNSRVRP*GQREGG Trigger: CCCTCCCTCCCTCTGCCCGCATGGCCGGACCCGGGA...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTCTCCTGCACGGTGGTTaGGCCTGGCTGGGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AVFPCHRGASLCFSLFFVLLHGG*AWLGSG Trigger: CCCAGAGCCCAGCCAGGCGCAACCACCGTGCAGGAG...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATCACGGTGGTTGCGCCTaGCTGGGCTCTGGGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNHGGCA*LGSGGL Trigger: AAGACCCCCAGAGCCCAGCCAGGCGCAACCACCGTG...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTGCTGGGCAGTGGGGCTaGCAGCTGCAAATGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: AVFPCHRGASLCFSLFFVAGQWG*QLQMAS Trigger: ACTTGCCATTTGCAGCTGGCAGCCCCACTGCCCAGC...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCCCAGGGGCTGGGCAGTaGGGCTGCCAGCTGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPPGAGQ*GCQLQM Trigger: CATTTGCAGCTGGCAGCCCCACTGCCCAGCCCCTGG...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATCAGCCGAGGGGTTACTaGAAGCCTGCAGGGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNQPRGY*KPAGTS Trigger: TGAGGTCCCTGCAGGCTTTCAGTAACCCCTCGGCTG...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTAGTGGGGCTGCCAGCTaGAAATGGCAAGTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: AVFPCHRGASLCFSLFFVSGAAS*KWQVLR Trigger: CCTGAGGACTTGCCATTTGCAGCTGGCAGCCCCACT...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | GGTCACTTATATGTAGTTGCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCGCCAATGTTGGGCTGTaGGTGGCCACCACCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: GHLYVVAVFPCHRGASLCANVGL*VATTTE Trigger: CTCTGTGGTGGTGGCCACCCACAGCCCAACATTGGC...GCAGAGGGAGGCACCACGGTGACATGGGAAGACAGCAACTACATATAAGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | GGTCACTTATATGTAGTTGCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCGGCCAGTACCTGGCATaGTGGGTGAAGCGCGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: GHLYVVAVFPCHRGASLCGQYLA*WVKRVV Trigger: TACCACGCGCTTCACCCACCATGCCAGGTACTGGCC...GCAGAGGGAGGCACCACGGTGACATGGGAAGACAGCAACTACATATAAGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCGCAGTGTCAAGAAGCTaGAGCCAAGCCTGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPAVSRS*SQAWAR Trigger: CCTGGCCCAGGCTTGGCTGCAGCTTCTTGACACTGC...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCCGTATCTGGGCACCATaGGCAGCCAAGACCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPRIWAP*AAKTWR Trigger: CCTCCAGGTCTTGGCTGCCCATGGTGCCCAGATACG...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | TTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTAGCAACTCAGTGGTTGCGCCTGGCTaGGCTCTGGGGGTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLWLDSTNITSGNGPSNSVVAPG*ALGVFW Trigger: CCAGAAGACCCCCAGAGCCCAGCCAGGCGCAACCAC...TGAGTTGCTAGGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATCCGCTATGTGGATCATaGGATGTGGAGCAGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNPLCGS*DVEQGQ Trigger: TTGGCCCTGCTCCACATCTCATGATCCACATAGCGG...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATCAATGTCCAGTCCAGTaGGGGACCAGTAGTACGAGG | + |
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Preference number: 4 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNQCPVQ*GTSSTR Trigger: CCTCGTACTACTGGTCCCTCACTGGACTGGACATTG...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | GGTCACTTATATGTAGTTGCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCGACTTTCACATCCACTaGGATGCCAGCCGAGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: GHLYVVAVFPCHRGASLCDFHIH*DASRGV Trigger: AACCCCTCGGCTGGCATCTCAGTGGATGTGAAAGTC...GCAGAGGGAGGCACCACGGTGACATGGGAAGACAGCAACTACATATAAGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTTCTCGTTCAAAGAGTTaGCTCAGCTGCTCCTGCACG | + |
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Preference number: 4 (lower is better) Translates to: AVFPCHRGASLCFSLFFVSRSKS*LSCSCT Trigger: CGTGCAGGAGCAGCTGAGGCAACTCTTTGAACGAGA...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATACCATGAACTTGCTGTaGTTCACGCGGCTGAACGGG | + |
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Preference number: 4 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNTMNLL*FTRLNG Trigger: CCCGTTCAGCCGCGTGAACCACAGCAAGTTCATGGT...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | GGTCACTTATATGTAGTTGCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTGTGGTTCACGCGGCTaGACGGGATGTTGGAATGAT | + |
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Preference number: 4 (lower is better) Translates to: GHLYVVAVFPCHRGASLCCGSRG*TGCWND Trigger: ATCATTCCAACATCCCGTTCAGCCGCGTGAACCACA...GCAGAGGGAGGCACCACGGTGACATGGGAAGACAGCAACTACATATAAGTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTGTGGATCATGAGATGTaGAGCAGGGCCAATCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: AVFPCHRGASLCFSLFFVVDHEM*SRANQR Trigger: TCTCTGATTGGCCCTGCTCCACATCTCATGATCCAC...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTGGGCAGCCAAGACCTaGAGGTCAGTGGATGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPWAAKT*RSVDVL Trigger: CAAGACATCCACTGACCTCCAGGTCTTGGCTGCCCA...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTCCACAACCCAGAATTTaGAGTGTAGAACACCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: AVFPCHRGASLCFSLFFVPQPRI*SVEHPQ Trigger: CTGGGGGTGTTCTACACTCCAAATTCTGGGTTGTGG...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR CAA 72 bp | CTCAGTGGTGATCCTTTGCTTGCTTGGTTTCTGAGCTaGGGCAGATGGAAGTCTGGGGAGCATCAGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LSGDPLLAWFLS*GRWKSGEHQCP Trigger: TGGACACTGATGCTCCCCAGACTTCCATCTGCCCAAGCTCAGAAACCAAGCAAGCAAAGGATCACCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | GGTCACTTATATGTAGTTGCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCAACGGGATGTTGGAATaGTTTCCCACAGGCACGATG | + |
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Preference number: 4 (lower is better) Translates to: GHLYVVAVFPCHRGASLCNGMLE*FPTGTM Trigger: CATCGTGCCTGTGGGAAATCATTCCAACATCCCGTT...GCAGAGGGAGGCACCACGGTGACATGGGAAGACAGCAACTACATATAAGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCATCAGAGACCTCCACTaGTGTCTGGAGTGGTATCCG | + |
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Preference number: 4 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPIRDLH*CLEWYP Trigger: CGGATACCACTCCAGACAGCAGTGGAGGTCTCTGAT...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATCAGGAGTTATTCTGCTaGTCAGCGTCTCCTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNQELFC*SASPFR Trigger: CCTGAAAGGAGACGCTGAGCAGCAGAATAACTCCTG...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | TTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTAGCAACTCATGTCTTGGCCAATGTTaGGCTGTGGGTGGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: LLWLDSTNITSGNGPSNSCLGQC*AVGGHH Trigger: GTGGTGGCCACCCACAGCCCAACATTGGCCAAGACA...TGAGTTGCTAGGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTGGAAGCGGTTGATGTaGGATGAGAAGTTCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPWKRLM*DEKFRG Trigger: GCCTCGGAACTTCTCATCCCACATCAACCGCTTCCA...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTTGCTGCAGTTGTAGATaGTTGCACCAAGTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: AVFPCHRGASLCFSLFFVCCSCR*LHQVPS Trigger: TGAAGGAACTTGGTGCAATCATCTACAACTGCAGCA...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATCTGAGAAGAAGCTGTTaGAACTTCTGTAGAAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNLRRSC*NFCRRA Trigger: GGCCCTTCTACAGAAGTTCCAACAGCTTCTTCTCAG...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| 3UTR CAA 72 bp | ACCTGGGTCAGGTCAGTAGCTGGTGGCAGGGTTTTATaGTGGCTGGACAGCACCAACATTACATCTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: TWVRSVAGGRVL*WLDSTNITSGN Trigger: ATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCACCAGCTACTGACCTGACCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | TTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTAGCAACTCAAGGGATGGAAGCGGTTaGTGTGGGATGAGAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LLWLDSTNITSGNGPSNSRDGSG*CGMRSS Trigger: GGAACTTCTCATCCCACATCAACCGCTTCCATCCCT...TGAGTTGCTAGGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCAAAGAAGTGGCCCCTTaGCACAGGAACAAGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPKEVAP*HRNKMR Trigger: TCTCATCTTGTTCCTGTGGCAAGGGGCCACTTCTTT...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR GCA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATGCAGTTGTAGATGATTaGACCAAGTTCCTTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNAVVDD*TKFLHL Trigger: CAGGTGAAGGAACTTGGTGCAATCATCTACAACTGC...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CCA 90 bp | TTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTAGCAACTCAAGAAATAGGCCGTGGTaGGAACCCCATCAAAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LLWLDSTNITSGNGPSNSRNRPW*EPHQRD Trigger: GTCCCTTTGATGGGGTTCCCACCACGGCCTATTTCT...TGAGTTGCTAGGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | TTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTAGCAACTCATCCACAAGGATGAGCTaGCAGGAGTTATTCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLWLDSTNITSGNGPSNSSTRMS*QELFCC Trigger: GCAGCAGAATAACTCCTGTCAGCTCATCCTTGTGGA...TGAGTTGCTAGGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR TCA 90 bp | TTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCTAGCAACTCACCACAGAGATGTTCCTaGGAAGAAGCTGTTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: LLWLDSTNITSGNGPSNSPQRCS*EEAVGT Trigger: AGTTCCAACAGCTTCTTCTCAGGAACATCTCTGTGG...TGAGTTGCTAGGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 90 bp | TCAAAGAGTTGCCTCAGCTGCTCCTGCACGGTGGTTGCGCCTGGCTaGGCTCTGGGGGTCTTCTGGCTGACAATCAGGCCCACACCAGCG | + |
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Preference number: 5 (lower is better) Translates to: SKSCLSCSCTVVAPG*ALGVFWLTIRPTPA Trigger: CGCTGGTGTGGGCCTGATTGTCAGCCAGAAGACCCCCAGAGCCCAGCCAGGCGCAACCACCGTGCAGGAGCAGCTGAGGCAACTCTTTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS GCA 90 bp | CCAGTCTCGTTCAAAGAGTTGCCTCAGCTGCTCCTGCACGGTGGTTaGGCCTGGCTGGGCTCTGGGGGTCTTCTGGCTGACAATCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: PVSFKELPQLLLHGG*AWLGSGGLLADNQA Trigger: GGCCTGATTGTCAGCCAGAAGACCCCCAGAGCCCAGCCAGGCGCAACCACCGTGCAGGAGCAGCTGAGGCAACTCTTTGAACGAGACTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 90 bp | TCGTTCAAAGAGTTGCCTCAGCTGCTCCTGCACGGTGGTTGCGCCTaGCTGGGCTCTGGGGGTCTTCTGGCTGACAATCAGGCCCACACC | + |
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Preference number: 5 (lower is better) Translates to: SFKELPQLLLHGGCA*LGSGGLLADNQAHT Trigger: GGTGTGGGCCTGATTGTCAGCCAGAAGACCCCCAGAGCCCAGCCAGGCGCAACCACCGTGCAGGAGCAGCTGAGGCAACTCTTTGAACGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 90 bp | TCTGGGCACCATGGGCAGCCAAGACCTGGAGGTCAGTGGATGTCTTaGCCAATGTTGGGCTGTGGGTGGCCACCACCACAGAGATGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SGHHGQPRPGGQWMS*PMLGCGWPPPQRCS Trigger: GGAACATCTCTGTGGTGGTGGCCACCCACAGCCCAACATTGGCCAAGACATCCACTGACCTCCAGGTCTTGGCTGCCCATGGTGCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 90 bp | CTTGTCGTATCTGGGCACCATGGGCAGCCAAGACCTGGAGGTCAGTaGATGTCTTGGCCAATGTTGGGCTGTGGGTGGCCACCACCACAG | + |
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Preference number: 5 (lower is better) Translates to: LVVSGHHGQPRPGGQ*MSWPMLGCGWPPPQ Trigger: CTGTGGTGGTGGCCACCCACAGCCCAACATTGGCCAAGACATCCACTGACCTCCAGGTCTTGGCTGCCCATGGTGCCCAGATACGACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS GCA 90 bp | ATGGTGGGGTCTGTGTTGAACCAGCAGCTGACCAGTAAGCGCACATaGACACCCTTATTGAGGGCCGCTGCCCGTAGCGCATTGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: MVGSVLNQQLTSKRT*TPLLRAAARSALSS Trigger: GCTGGACAATGCGCTACGGGCAGCGGCCCTCAATAAGGGTGTGCATGTGCGCTTACTGGTCAGCTGCTGGTTCAACACAGACCCCACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 90 bp | TTCATGGGCACTTGTCGTATCTGGGCACCATGGGCAGCCAAGACCTaGAGGTCAGTGGATGTCTTGGCCAATGTTGGGCTGTGGGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: FMGTCRIWAPWAAKT*RSVDVLANVGLWVA Trigger: GGCCACCCACAGCCCAACATTGGCCAAGACATCCACTGACCTCCAGGTCTTGGCTGCCCATGGTGCCCAGATACGACAAGTGCCCATGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 90 bp | GCCAAGACCTGGAGGTCAGTGGATGTCTTGGCCAATGTTGGGCTGTaGGTGGCCACCACCACAGAGATGTTCCTGAGAAGAAGCTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: AKTWRSVDVLANVGL*VATTTEMFLRRSCW Trigger: CCAACAGCTTCTTCTCAGGAACATCTCTGTGGTGGTGGCCACCCACAGCCCAACATTGGCCAAGACATCCACTGACCTCCAGGTCTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS TCA 90 bp | ACAGCTAGCATCCCCAGTACCATGCCAAGTCCGCTATGTGGATCATaGGATGTGGAGCAGGGCCAATCAGAGACCTCCACTGCTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TASIPSTMPSPLCGS*DVEQGQSETSTAVW Trigger: CCAGACAGCAGTGGAGGTCTCTGATTGGCCCTGCTCCACATCTCATGATCCACATAGCGGACTTGGCATGGTACTGGGGATGCTAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CAA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTATGGTGGGGTCTGTGTaGAACCAGCAGCTGACCAGT | + |
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Preference number: 5 (lower is better) Translates to: AVFPCHRGASLCFSLFFVMVGSV*NQQLTS Trigger: ACTGGTCAGCTGCTGGTTCAACACAGACCCCACCAT...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CAA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTGTCTCGTTCAAAGAGTaGCCTCAGCTGCTCCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: AVFPCHRGASLCFSLFFVVSFKE*PQLLLH Trigger: GTGCAGGAGCAGCTGAGGCAACTCTTTGAACGAGAC...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CAA 90 bp | TGGCAGGGTTTTATTGTGGCTGGACAGCACCAACATTACATCTGGGAATGGCCCATGTCTTGGCCAATGTaGGGCTGTGGGTGGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: WQGFIVAGQHQHYIWEWPMSWPM*GCGWPP Trigger: TGGTGGCCACCCACAGCCCAACATTGGCCAAGACAT...GGGCCATTCCCAGATGTAATGTTGGTGCTGTCCAGCCACAATAAAACCCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CAA 90 bp | GGCAGATGGAAGTCTGGGGAGCATCAGTGTCCATCTAGAGCTGTAGGCCAGAATTCTGTGACCATGAACTaGCTGTGGTTCACGCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GRWKSGEHQCPSRAVGQNSVTMN*LWFTRL Trigger: CAGCCGCGTGAACCACAGCAAGTTCATGGTCACAGA...ATTCTGGCCTACAGCTCTAGATGGACACTGATGCTCCCCAGACTTCCATCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS TCA 90 bp | GCTGCAAATGGCAAGTCCTCAGGGATGCTTTCCACAAGGATGAGCTaGCAGGAGTTATTCTGCTGCTCAGCGTCTCCTTTCAGGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: AANGKSSGMLSTRMS*QELFCCSASPFRVS Trigger: GGAGACCCTGAAAGGAGACGCTGAGCAGCAGAATAACTCCTGTCAGCTCATCCTTGTGGAAAGCATCCCTGAGGACTTGCCATTTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS TCA 90 bp | TGCCAGCTGCAAATGGCAAGTCCTCAGGGATGCTTTCCACAAGGATaGGCTGACAGGAGTTATTCTGCTGCTCAGCGTCTCCTTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CQLQMASPQGCFPQG*ADRSYSAAQRLLSG Trigger: CCCTGAAAGGAGACGCTGAGCAGCAGAATAACTCCTGTCAGCTCATCCTTGTGGAAAGCATCCCTGAGGACTTGCCATTTGCAGCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CAA 90 bp | GCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCTTTAGCCTCTTCTTCGTTTCCACAACCCAGAATTaGGAGTGTAGAACACCCCCA | + |
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Preference number: 5 (lower is better) Translates to: AVFPCHRGASLCFSLFFVSTTQN*ECRTPP Trigger: TGGGGGTGTTCTACACTCCAAATTCTGGGTTGTGGA...AACGAAGAAGAGGCTAAAGCAGAGGGAGGCACCACGGTGACATGGGAAGACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS GCA 90 bp | ATGTGGATCATGAGATGTGGAGCAGGGCCAATCAGAGACCTCCACTaGTGTCTGGAGTGGTATCCGCATCTCTGGGTGCTCTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MWIMRCGAGPIRDLH*CLEWYPHLWVLFLL Trigger: AAGAAGAAAGAGCACCCAGAGATGCGGATACCACTCCAGACAGCAGTGGAGGTCTCTGATTGGCCCTGCTCCACATCTCATGATCCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS GCA 90 bp | TTCCTGAGAAGAAGCTGTTGGAACTTCTGTAGAAGGGCCTCTCCCTaGCGAGAAGACGAGTCATTGACTCCAATGTCCAGTCCAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLRRSCWNFCRRASP*REDESLTPMSSPVR Trigger: CCTCACTGGACTGGACATTGGAGTCAATGACTCGTCTTCTCGGCAGGGAGAGGCCCTTCTACAGAAGTTCCAACAGCTTCTTCTCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS-3UTR CAA 90 bp | GGTCACTTATATGTAGTTGCTGTCTTCCCATGTCACCGTGGTGCCTCCCTCTGCCGAGAAGACGAGTCATaGACTCCAATGTCCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GHLYVVAVFPCHRGASLCREDES*TPMSSP Trigger: TGGACTGGACATTGGAGTCAATGACTCGTCTTCTCG...GCAGAGGGAGGCACCACGGTGACATGGGAAGACAGCAACTACATATAAGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS TCA 90 bp | ACCATGAACTTGCTGTGGTTCACGCGGCTGAACGGGATGTTGGAATaGTTTCCCACAGGCACGATGAAGACTTTCACATCCACTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TMNLLWFTRLNGMLE*FPTGTMKTFTSTEM Trigger: CATCTCAGTGGATGTGAAAGTCTTCATCGTGCCTGTGGGAAATCATTCCAACATCCCGTTCAGCCGCGTGAACCACAGCAAGTTCATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | ACGGTGGTTGCGCCTGGCTGGGCTCTGGGGGTCTTCTaGCTGACAATCAGGCCCACACCAGCGGTGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TVVAPGWALGVF*LTIRPTPAVWL Trigger: CAGCCACACCGCTGGTGTGGGCCTGATTGTCAGCCAGAAGACCCCCAGAGCCCAGCCAGGCGCAACCACCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | TGCCTCAGCTGCTCCTGCACGGTGGTTGCGCCTGGCTaGGCTCTGGGGGTCTTCTGGCTGACAATCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CLSCSCTVVAPG*ALGVFWLTIRP Trigger: GGGCCTGATTGTCAGCCAGAAGACCCCCAGAGCCCAGCCAGGCGCAACCACCGTGCAGGAGCAGCTGAGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS GCA 72 bp | GATGAACTGGCGAGCACCCTCCATCACTCCCAACACTaGGTCCAGATCCCGGGTCCGGCCATGCGGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: DELASTLHHSQH*VQIPGPAMRAE Trigger: CTCTGCCCGCATGGCCGGACCCGGGATCTGGACGCAGTGTTGGGAGTGATGGAGGGTGCTCGCCAGTTCATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS GCA 72 bp | CTCCAGTCTCGTTCAAAGAGTTGCCTCAGCTGCTCCTaGACGGTGGTTGCGCCTGGCTGGGCTCTGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQSRSKSCLSCS*TVVAPGWALGV Trigger: GACCCCCAGAGCCCAGCCAGGCGCAACCACCGTGCAGGAGCAGCTGAGGCAACTCTTTGAACGAGACTGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | GAGTTGCCTCAGCTGCTCCTGCACGGTGGTTGCGCCTaGCTGGGCTCTGGGGGTCTTCTGGCTGACAATCAG | + |
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Preference number: 6 (lower is better) Translates to: ELPQLLLHGGCA*LGSGGLLADNQ Trigger: CTGATTGTCAGCCAGAAGACCCCCAGAGCCCAGCCAGGCGCAACCACCGTGCAGGAGCAGCTGAGGCAACTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | CTCGTTCAAAGAGTTGCCTCAGCTGCTCCTGCACGGTaGTTGCGCCTGGCTGGGCTCTGGGGGTCTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVQRVASAAPAR*LRLAGLWGSSG Trigger: GCCAGAAGACCCCCAGAGCCCAGCCAGGCGCAACCACCGTGCAGGAGCAGCTGAGGCAACTCTTTGAACGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CAA 72 bp | TGCACACCCTTATTGAGGGCCGCTGCCCGTAGCGCATaGTCCAGCACGGGCCAGTACCTGGCATGGTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CTPLLRAAARSA*SSTGQYLAWWV Trigger: CACCCACCATGCCAGGTACTGGCCCGTGCTGGACAATGCGCTACGGGCAGCGGCCCTCAATAAGGGTGTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CAA 90 bp | AAGCGCACATGCACACCCTTATTGAGGGCCGCTGCCCGTAGCGCATaGTCCAGCACGGGCCAGTACCTGGCATGGTGGGTGAAGCGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: KRTCTPLLRAAARSA*SSTGQYLAWWVKRV Trigger: CACGCGCTTCACCCACCATGCCAGGTACTGGCCCGTGCTGGACAATGCGCTACGGGCAGCGGCCCTCAATAAGGGTGTGCATGTGCGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS GCA 72 bp | TGGGAACTCCAGTCTCGTTCAAAGAGTTGCCTCAGCTaGTCCTGCACGGTGGTTGCGCCTGGCTGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WELQSRSKSCLS*SCTVVAPGWAL Trigger: CAGAGCCCAGCCAGGCGCAACCACCGTGCAGGAGCAGCTGAGGCAACTCTTTGAACGAGACTGGAGTTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | CATGGGCAGCCAAGACCTGGAGGTCAGTGGATGTCTTaGCCAATGTTGGGCTGTGGGTGGCCACCACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: HGQPRPGGQWMS*PMLGCGWPPPQ Trigger: CTGTGGTGGTGGCCACCCACAGCCCAACATTGGCCAAGACATCCACTGACCTCCAGGTCTTGGCTGCCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | TCTGGGCACCATGGGCAGCCAAGACCTGGAGGTCAGTaGATGTCTTGGCCAATGTTGGGCTGTGGGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGHHGQPRPGGQ*MSWPMLGCGWP Trigger: TGGCCACCCACAGCCCAACATTGGCCAAGACATCCACTGACCTCCAGGTCTTGGCTGCCCATGGTGCCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CAA 72 bp | CAGCAGCTGACCAGTAAGCGCACATGCACACCCTTATaGAGGGCCGCTGCCCGTAGCGCATTGTCCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: QQLTSKRTCTPL*RAAARSALSST Trigger: CGTGCTGGACAATGCGCTACGGGCAGCGGCCCTCAATAAGGGTGTGCATGTGCGCTTACTGGTCAGCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CAA 90 bp | GTGTTGAACCAGCAGCTGACCAGTAAGCGCACATGCACACCCTTATaGAGGGCCGCTGCCCGTAGCGCATTGTCCAGCACGGGCCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: VLNQQLTSKRTCTPL*RAAARSALSSTGQY Trigger: GTACTGGCCCGTGCTGGACAATGCGCTACGGGCAGCGGCCCTCAATAAGGGTGTGCATGTGCGCTTACTGGTCAGCTGCTGGTTCAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | GTGGTGGGAACCCCATCAAAGGGACCCCGCAAGGGATaGAAGCGGTTGATGTGGGATGAGAAGTTCCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VVGTPSKGPRKG*KRLMWDEKFRG Trigger: GCCTCGGAACTTCTCATCCCACATCAACCGCTTCCATCCCTTGCGGGGTCCCTTTGATGGGGTTCCCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CAA 90 bp | ATCTGGGCACCATGGGCAGCCAAGACCTGGAGGTCAGTGGATGTCTaGGCCAATGTTGGGCTGTGGGTGGCCACCACCACAGAGATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: IWAPWAAKTWRSVDV*ANVGLWVATTTEMF Trigger: GAACATCTCTGTGGTGGTGGCCACCCACAGCCCAACATTGGCCAAGACATCCACTGACCTCCAGGTCTTGGCTGCCCATGGTGCCCAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS TCA 72 bp | GGGACCCCGCAAGGGATGGAAGCGGTTGATGTGGGATaGGAAGTTCCGAGGCCAGGTTTTAGGGAGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: GTPQGMEAVDVG*EVPRPGFRENS Trigger: GCTGTTCTCCCTAAAACCTGGCCTCGGAACTTCTCATCCCACATCAACCGCTTCCATCCCTTGCGGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS GCA 72 bp | ATGAGATGTGGAGCAGGGCCAATCAGAGACCTCCACTaGTGTCTGGAGTGGTATCCGCATCTCTGGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: MRCGAGPIRDLH*CLEWYPHLWVL Trigger: GAGCACCCAGAGATGCGGATACCACTCCAGACAGCAGTGGAGGTCTCTGATTGGCCCTGCTCCACATCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | GTGGAGCAGGGCCAATCAGAGACCTCCACTGCTGTCTaGAGTGGTATCCGCATCTCTGGGTGCTCTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VEQGQSETSTAV*SGIRISGCSFF Trigger: GAAGAAAGAGCACCCAGAGATGCGGATACCACTCCAGACAGCAGTGGAGGTCTCTGATTGGCCCTGCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | ACTTGTCGTATCTGGGCACCATGGGCAGCCAAGACCTaGAGGTCAGTGGATGTCTTGGCCAATGTTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TCRIWAPWAAKT*RSVDVLANVGL Trigger: CAGCCCAACATTGGCCAAGACATCCACTGACCTCCAGGTCTTGGCTGCCCATGGTGCCCAGATACGACAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CAA 72 bp | CATAGCATAGTGGGAACTCCAGTCTCGTTCAAAGAGTaGCCTCAGCTGCTCCTGCACGGTGGTTGCGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HSIVGTPVSFKE*PQLLLHGGCAW Trigger: CCAGGCGCAACCACCGTGCAGGAGCAGCTGAGGCAACTCTTTGAACGAGACTGGAGTTCCCACTATGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS TCA 72 bp | CAGGCCCACACCAGCGGTGTGGCTGAAGTAGTCTTCTaGCCAGTTAGAGGTGCCTACATAGGCTGTCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QAHTSGVAEVVF*PVRGAYIGCLV Trigger: GACAAGACAGCCTATGTAGGCACCTCTAACTGGTCAGAAGACTACTTCAGCCACACCGCTGGTGTGGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | TGGAGGTCAGTGGATGTCTTGGCCAATGTTGGGCTGTaGGTGGCCACCACCACAGAGATGTTCCTGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WRSVDVLANVGL*VATTTEMFLRR Trigger: TCTTCTCAGGAACATCTCTGTGGTGGTGGCCACCCACAGCCCAACATTGGCCAAGACATCCACTGACCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | TCAAAGGGACCCCGCAAGGGATGGAAGCGGTTGATGTaGGATGAGAAGTTCCGAGGCCAGGTTTTAGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SKGPRKGWKRLM*DEKFRGQVLGR Trigger: TCTCCCTAAAACCTGGCCTCGGAACTTCTCATCCCACATCAACCGCTTCCATCCCTTGCGGGGTCCCTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS TCA 72 bp | ATCCCCAGTACCATGCCAAGTCCGCTATGTGGATCATaGGATGTGGAGCAGGGCCAATCAGAGACCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: IPSTMPSPLCGS*DVEQGQSETST Trigger: AGTGGAGGTCTCTGATTGGCCCTGCTCCACATCTCATGATCCACATAGCGGACTTGGCATGGTACTGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CCA 72 bp | GTACCATGCCAAGTCCGCTATGTGGATCATGAGATGTaGAGCAGGGCCAATCAGAGACCTCCACTGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VPCQVRYVDHEM*SRANQRPPLLS Trigger: AGACAGCAGTGGAGGTCTCTGATTGGCCCTGCTCCACATCTCATGATCCACATAGCGGACTTGGCATGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS TCA 72 bp | GGCAAGTCCTCAGGGATGCTTTCCACAAGGATGAGCTaGCAGGAGTTATTCTGCTGCTCAGCGTCTCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GKSSGMLSTRMS*QELFCCSASPF Trigger: GAAAGGAGACGCTGAGCAGCAGAATAACTCCTGTCAGCTCATCCTTGTGGAAAGCATCCCTGAGGACTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS TCA 72 bp | ATTTCCCACAGGCACGATGAAGACTTTCACATCCACTaGGATGCCAGCCGAGGGGTTACTGAAAGCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISHRHDEDFHIH*DASRGVTESLQ Trigger: CTGCAGGCTTTCAGTAACCCCTCGGCTGGCATCTCAGTGGATGTGAAAGTCTTCATCGTGCCTGTGGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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| CDS CAA 72 bp | AGGGAACATCCGATGACTGGTGAAAGAAGTGGCCCCTaGCCACAGGAACAAGATGAGAGTCACAGAGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: REHPMTGERSGP*PQEQDESHRAE Trigger: CTCAGCTCTGTGACTCTCATCTTGTTCCTGTGGCAAGGGGCCACTTCTTTCACCAGTCATCGGATGTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063888.5 |
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