Pregenerated sensors for PLD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003363Ensembl transcript IDs: ENSMUST00000117095.8, ENSMUST00000117611.8, ENSMUST00000127240.8, ENSMUST00000131106.8, ENSMUST00000150964.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CACCCTGCTGGGCAGAGGGCTCTTGCGTGTGGGTGTCATTATTTGTaGGGGTCCAGTAGAAGGATGCGATGTCCAGGCTGCTGTGAGCAC | + |
Preference number: 1 (lower is better) Translates to: HPAGQRALACGCHYL*GSSRRMRCPGCCEH Trigger: GTGCTCACAGCAGCCTGGACATCGCATCCTTCTACTGGACCCTCACAAATAATGACACCCACACGCAAGAGCCCTCTGCCCAGCAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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3UTR GCA 90 bp | CTCTTGCGTGTGGGTGTCATTATTTGTGAGGGTCCAGTAGAAGGATaGGATGTCCAGGCTGCTGTGAGCACCGGCAAGGAGGCCCAACCA | + |
Preference number: 1 (lower is better) Translates to: LLRVGVIICEGPVEG*DVQAAVSTGKEAQP Trigger: TGGTTGGGCCTCCTTGCCGGTGCTCACAGCAGCCTGGACATCGCATCCTTCTACTGGACCCTCACAAATAATGACACCCACACGCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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3UTR-3UTR TCA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACACCAGGACCCAGAGCTaGGTCCAAGGAGGCCTGGAA | + |
Preference number: 2 (lower is better) Translates to: GGGSSRSIVESTEPHGIDTRTQS*VQGGLE Trigger: TTCCAGGCCTCCTTGGACTCAGCTCTGGGTCCTGGT...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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3UTR-3UTR TCA 90 bp | AGAGGGCTCTTGCGTGTGGGTGTCATTATTTGTGAGGGTCCAGTAGAAGGATGCATGTCCAGGCTGCTGTaGGCACCGGCAAGGAGGCCC | + |
Preference number: 2 (lower is better) Translates to: RGLLRVGVIICEGPVEGCMSRLL*APARRP Trigger: GGGCCTCCTTGCCGGTGCTCACAGCAGCCTGGACAT...GCATCCTTCTACTGGACCCTCACAAATAATGACACCCACACGCAAGAGCCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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3UTR-3UTR TCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGACCAGGACCCAGAGCTaGGTCCAAGGAGGCCTGGAA | + |
Preference number: 2 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMTRTQS*VQGGLE Trigger: TTCCAGGCCTCCTTGGACTCAGCTCTGGGTCCTGGT...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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3UTR-3UTR CAA 90 bp | AGTAGAAGGATGCGATGTCCAGGCTGCTGTGAGCACCGGCAAGGAGGCCCAACCTGGCTAGTGGAGGGGTaGCTCGTGGTGGCATTGGGA | + |
Preference number: 3 (lower is better) Translates to: SRRMRCPGCCEHRQGGPTWLVEG*LVVALG Trigger: TCCCAATGCCACCACGAGCAACCCCTCCACTAGCCA...GGTTGGGCCTCCTTGCCGGTGCTCACAGCAGCCTGGACATCGCATCCTTCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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3UTR TCA 72 bp | GGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTaGGTCCAAGGAGGCCTGGAAGGCTTTGACCTGTCC | + |
Preference number: 3 (lower is better) Translates to: GKGMGTVTRTQS*VQGGLEGFDLS Trigger: GGACAGGTCAAAGCCTTCCAGGCCTCCTTGGACTCAGCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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3UTR TCA 72 bp | GGGCAGAGGGCTCTTGCGTGTGGGTGTCATTATTTGTaGGGGTCCAGTAGAAGGATGCGATGTCCAGGCTGC | + |
Preference number: 3 (lower is better) Translates to: GQRALACGCHYL*GSSRRMRCPGC Trigger: GCAGCCTGGACATCGCATCCTTCTACTGGACCCTCACAAATAATGACACCCACACGCAAGAGCCCTCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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CDS-3UTR CCA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGCAGAGCCTTCAGGTCTaGGGTGCGGCCACTTGGACA | + |
Preference number: 4 (lower is better) Translates to: PSSARSTGARVSGQWRWRQSLQV*GAATWT Trigger: TGTCCAAGTGGCCGCACCCCAGACCTGAAGGCTCTG...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | ACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTGCCACGCCCAGCTCCTTaGCCTGGGTCAGCGACCGCC | + |
Preference number: 4 (lower is better) Translates to: TRDRQRQGHGDSNQDPELPRPAP*PGSATA Trigger: GGCGGTCGCTGACCCAGGTCAAGGAGCTGGGCGTGG...CAGCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGCACTGTCCACCACGTTaGGCAGAGCCTTCAGGTCTG | + |
Preference number: 4 (lower is better) Translates to: PSSARSTGARVSGQWRWRHCPPR*AEPSGL Trigger: CAGACCTGAAGGCTCTGCTCAACGTGGTGGACAGTG...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGAGAACCTCTTCACCCTaGTGGGCAGAGGGCTCTTGC | + |
Preference number: 4 (lower is better) Translates to: PSSARSTGARVSGQWRWRRTSSP*WAEGSC Trigger: GCAAGAGCCCTCTGCCCAGCAGGGTGAAGAGGTTCT...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | CCACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCATGTCCAGGCTGCTGTaGGCACCGGCAAGGAGGCCC | + |
Preference number: 4 (lower is better) Translates to: PHGIDRGKGMGTVTRTQSMSRLL*APARRP Trigger: GGGCCTCCTTGCCGGTGCTCACAGCAGCCTGGACAT...GCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGGTCATAGCAGGGGGCTaGGCGCTGATTTGGTCCAAA | + |
Preference number: 4 (lower is better) Translates to: PSSARSTGARVSGQWRWRVIAGG*ALIWSK Trigger: TTTGGACCAAATCAGCGCCCAGCCCCCTGCTATGAC...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | CCACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCCCCAGCTCCTTGACCTaGGTCAGCGACCGCCAGTCC | + |
Preference number: 4 (lower is better) Translates to: PHGIDRGKGMGTVTRTQSPSSLT*VSDRQS Trigger: GGACTGGCGGTCGCTGACCCAGGTCAAGGAGCTGGG...GCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGCCACGCCCAGCTCCTTaGCCTGGGTCAGCGACCGCC | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGPRPAP*PGSATA Trigger: GGCGGTCGCTGACCCAGGTCAAGGAGCTGGGCGTGG...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | AAGGAGGCCCAACCAGGCCTGGCTAGTGGAGGGGTTGCTCGTGGTGGCATTGGGAGCACCGCCCTTCTCTaGTGCCTTCCATGCCTCGAT | + |
Preference number: 4 (lower is better) Translates to: KEAQPGLASGGVARGGIGSTALL*CLPCLD Trigger: ATCGAGGCATGGAAGGCAGCAGAGAAGGGCGGTGCT...CCCAATGCCACCACGAGCAACCCCTCCACTAGCCAGGCCTGGTTGGGCCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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CDS-3UTR CCA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGGGCACCTTCAGCTCCTaGTACATCAGTTTGGGCTTC | + |
Preference number: 4 (lower is better) Translates to: PSSARSTGARVSGQWRWRGTFSS*YISLGF Trigger: GAAGCCCAAACTGATGTACCAGGAGCTGAAGGTGCC...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGTGTACTTGTTGTGGTTaGCACGGGCATAGGGGATTC | + |
Preference number: 4 (lower is better) Translates to: PSSARSTGARVSGQWRWRCTCCG*HGHRGF Trigger: GAATCCCCTATGCCCGTGTCAACCACAACAAGTACA...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | CCACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCCCAGACCCTCAGGAATaGTCTCCACCAGCACCGCCT | + |
Preference number: 4 (lower is better) Translates to: PHGIDRGKGMGTVTRTQSPDPQE*SPPAPP Trigger: AGGCGGTGCTGGTGGAGAGCATTCCTGAGGGTCTGG...GCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | ACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTGGCAGGCGGCAGGCATTaGCCACACTGTTGGCTGAGG | + |
Preference number: 4 (lower is better) Translates to: TRDRQRQGHGDSNQDPELAGGRH*PHCWLR Trigger: CCTCAGCCAACAGTGTGGGCAATGCCTGCCGCCTGC...CAGCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | AAGGAGGCCCAACCAGGCCTGGCTAGTGGAGGGGTTGCTCGTGGTGGCATTGGGACCGCCCTTCTCTGCTaGCTTCCATGCCTCGATTTC | + |
Preference number: 4 (lower is better) Translates to: KEAQPGLASGGVARGGIGTALLC*LPCLDF Trigger: GAAATCGAGGCATGGAAGGCAGCAGAGAAGGGCGGT...CCCAATGCCACCACGAGCAACCCCTCCACTAGCCAGGCCTGGTTGGGCCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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CDS-3UTR TCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGATGTCCAGGCTGCTGTaGGCACCGGCAAGGAGGCCC | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGMSRLL*APARRP Trigger: GGGCCTCCTTGCCGGTGCTCACAGCAGCCTGGACAT...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGGGGTGTCATTATTTGTaGGGGTCCAGTAGAAGGATG | + |
Preference number: 4 (lower is better) Translates to: PSSARSTGARVSGQWRWRGCHYL*GSSRRM Trigger: CATCCTTCTACTGGACCCTCACAAATAATGACACCC...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGGGACCGCGGCCAGGTTaGTGGGATGGAGCTACCTGC | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGGPRPG*WDGATC Trigger: GCAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCC...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAAGGCCCAACCAGGCCTaGCTAGTGGAGGGGTTGCTC | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGIRPNQA*LVEGLL Trigger: GAGCAACCCCTCCACTAGCCAGGCCTGGTTGGGCCT...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGTGGGGTGCGGCCACTTaGACACAGTGGTGGGGGTGC | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGWGAAT*TQWWGC Trigger: GCACCCCCACCACTGTGTCCAAGTGGCCGCACCCCA...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | CCACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCGTGTGCAGGACACCATaGGTCAGCTTCTGCATGTCC | + |
Preference number: 4 (lower is better) Translates to: PHGIDRGKGMGTVTRTQSVCRTP*VSFCMS Trigger: GGACATGCAGAAGCTGACTCATGGTGTCCTGCACAC...GCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGGGACCGCGGCCAGGTTaGTGGGATGGAGCTACCTGC | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMGPRPG*WDGATC Trigger: GCAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCC...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | CCACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCGCGGGCTTTCTTCTCTaGTGCCTTCCATGCCTCGAT | + |
Preference number: 4 (lower is better) Translates to: PHGIDRGKGMGTVTRTQSAGFLL*CLPCLD Trigger: ATCGAGGCATGGAAGGCAGCAGAGAAGAAAGCCCGC...GCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | ACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTGCAGCAGGGAGGTGCCTaGTGTCTCCGTGAAGTAGCT | + |
Preference number: 4 (lower is better) Translates to: TRDRQRQGHGDSNQDPELQQGGA*CLREVA Trigger: AGCTACTTCACGGAGACAGCAGGCACCTCCCTGCTG...CAGCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGCCCAGCTCCTTGACCTaGGTCAGCGACCGCCAGTCC | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMPSSLT*VSDRQS Trigger: GGACTGGCGGTCGCTGACCCAGGTCAAGGAGCTGGG...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGCCAGGTTGATGGGATaGAGCTACCTGCCTGGCCCA | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGIARLMG*SYLPGP Trigger: TGGGCCAGGCAGGTAGCTCCATCCCATCAACCTGGC...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATACAGAACCTGCGTGGATaGGAGAACTCCATGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGIQNLRG*ENSMVG Trigger: GCCCACCATGGAGTTCTCTCATCCACGCAGGTTCTG...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGCCAGACCCTCAGGAATaGTCTCCACCAGCACCGCCT | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGPDPQE*SPPAPP Trigger: AGGCGGTGCTGGTGGAGAGCATTCCTGAGGGTCTGG...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | ACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTGGGTCCAGTAGAAGGATaGGATGTCCAGGCTGCTGTG | + |
Preference number: 4 (lower is better) Translates to: TRDRQRQGHGDSNQDPELGPVEG*DVQAAV Trigger: CACAGCAGCCTGGACATCGCATCCTTCTACTGGACC...CAGCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATATCTGCATGTCCACCATaGGGACCTGGGCACCACTCT | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGISACPP*GPGHHS Trigger: AGAGTGGTGCCCAGGTCCGCATGGTGGACATGCAGA...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | ACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTGTGGGATGGAGCTACCTaGCTGGCCCAGGAACCAATA | + |
Preference number: 4 (lower is better) Translates to: TRDRQRQGHGDSNQDPELWDGAT*LAQEPI Trigger: TATTGGTTCCTGGGCCAGGCAGGTAGCTCCATCCCA...CAGCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGGCAGGCGGCAGGCATTaGCCACACTGTTGGCTGAGG | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMAGGRH*PHCWLR Trigger: CCTCAGCCAACAGTGTGGGCAATGCCTGCCGCCTGC...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | GTAGAAGGATGCGATGTCCAGGCTGCTGTGAGCACCGGCAAGGAGGCCCAACCAGGCACCTTCAGCTCCTaGTACATCAGTTTGGGCTTC | + |
Preference number: 4 (lower is better) Translates to: VEGCDVQAAVSTGKEAQPGTFSS*YISLGF Trigger: GAAGCCCAAACTGATGTACCAGGAGCTGAAGGTGCC...TGGTTGGGCCTCCTTGCCGGTGCTCACAGCAGCCTGGACATCGCATCCTTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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CDS-3UTR CCA 90 bp | ACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTGGTCATAGCAGGGGGCTaGGCGCTGATTTGGTCCAAA | + |
Preference number: 4 (lower is better) Translates to: TRDRQRQGHGDSNQDPELVIAGG*ALIWSK Trigger: TTTGGACCAAATCAGCGCCCAGCCCCCTGCTATGAC...CAGCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATATCCACCATGCGGACCTaGGCACCACTCTGTAGCAGA | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGISTMRT*APLCSR Trigger: TCTGCTACAGAGTGGTGCCCAGGTCCGCATGGTGGA...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGGCCAGGTTGATGGGATaGAGCTACCTGCCTGGCCCA | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGARLMG*SYLPGP Trigger: TGGGCCAGGCAGGTAGCTCCATCCCATCAACCTGGC...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGTGTGCAGGACACCATaGGTCAGCTTCTGCATGTCC | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGIVCRTP*VSFCMS Trigger: GGACATGCAGAAGCTGACTCATGGTGTCCTGCACAC...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGTCCATTGGTGTTTCTTaGTTATATCGGGTGTCAAAG | + |
Preference number: 4 (lower is better) Translates to: PSSARSTGARVSGQWRWRSIGVS*LYRVSK Trigger: CTTTGACACCCGATATAATCAAGAAACACCAATGGA...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
||
CDS-3UTR TCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGCACTGTCCACCACGTTaGGCAGAGCCTTCAGGTCTG | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGHCPPR*AEPSGL Trigger: CAGACCTGAAGGCTCTGCTCAACGTGGTGGACAGTG...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
||
CDS-3UTR TCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGCAGAACCTGCGTGGATaGGAGAACTCCATGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGQNLRG*ENSMVG Trigger: GCCCACCATGGAGTTCTCTCATCCACGCAGGTTCTG...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
||
CDS-3UTR GCA 90 bp | AGTAGAAGGATGCGATGTCCAGGCTGCTGTGAGCACCGGCAAGGAGGCCCAACCCTCTGCTGCCTTCCATaGCTCGATTTCATTCAAGGG | + |
Preference number: 4 (lower is better) Translates to: SRRMRCPGCCEHRQGGPTLCCLP*LDFIQG Trigger: CCCTTGAATGAAATCGAGGCATGGAAGGCAGCAGAG...GGTTGGGCCTCCTTGCCGGTGCTCACAGCAGCCTGGACATCGCATCCTTCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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CDS-3UTR GCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGCGGGCTTTCTTCTCTaGTGCCTTCCATGCCTCGAT | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGIAGFLL*CLPCLD Trigger: ATCGAGGCATGGAAGGCAGCAGAGAAGAAAGCCCGC...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACATGCGATGTCCAGGCTaGTGTGAGCACCGGCAAGGA | + |
Preference number: 4 (lower is better) Translates to: GGGSSRSIVESTEPHGIDMRCPG*CEHRQG Trigger: TCCTTGCCGGTGCTCACAGCAGCCTGGACATCGCAT...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAACCTCGAGGTGCCAGTaGCTGAAGCTGCTGAAGAAC | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGITSRCQ*LKLLKN Trigger: GTTCTTCAGCAGCTTCAGGCACTGGCACCTCGAGGT...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGCCTTCAGGTCTGGGGTaGGGCCACTTGGACACAGTG | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMPSGLG*GHLDTV Trigger: CACTGTGTCCAAGTGGCCGCACCCCAGACCTGAAGG...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
||
CDS-3UTR GCA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACCAGCAGGGAGGTGCCTaGTGTCTCCGTGAAGTAGCT | + |
Preference number: 4 (lower is better) Translates to: GGGSSRSIVESTEPHGIDQQGGA*CLREVA Trigger: AGCTACTTCACGGAGACAGCAGGCACCTCCCTGCTG...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
||
CDS-3UTR CCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGACCTCTTCACCCTGCTaGGCAGAGGGCTCTTGCGTG | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMTSSPC*AEGSCV Trigger: CACGCAAGAGCCCTCTGCCCAGCAGGGTGAAGAGGT...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
||
CDS-3UTR CCA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACCAGCCAGAGGCCCATTaGGTTTGCTCACAGCGATGC | + |
Preference number: 4 (lower is better) Translates to: GGGSSRSIVESTEPHGIDQPEAH*VCSQRC Trigger: GCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTG...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
||
CDS-3UTR TCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGGAGCTGGGGTGCCATTaGGGCAGATCTCCATTGGTG | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMELGCH*GRSPLV Trigger: CACCAATGGAGATCTGCCTCAATGGCACCCCAGCTC...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
||
CDS-3UTR GCA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACGGTCCAGTAGAAGGATaGGATGTCCAGGCTGCTGTG | + |
Preference number: 4 (lower is better) Translates to: GGGSSRSIVESTEPHGIDGPVEG*DVQAAV Trigger: CACAGCAGCCTGGACATCGCATCCTTCTACTGGACC...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGACCTCGAGGTGCCAGTaGCTGAAGCTGCTGAAGAAC | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGTSRCQ*LKLLKN Trigger: GTTCTTCAGCAGCTTCAGGCACTGGCACCTCGAGGT...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGCCACCACCCAGAACTTaGTGTGCAGGACACCATGAG | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGPPPRT*CAGHHE Trigger: CTCATGGTGTCCTGCACACCAAGTTCTGGGTGGTGG...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACGAAGGACCGCATCGATaGATCAGAGTGTCCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: GGGSSRSIVESTEPHGIDEGPHR*IRVSPA Trigger: TGCTGGGGACACTCTGATCCATCGATGCGGTCCTTC...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGTCCCATAGAAACAGCTaGGTCATCAGGGCACCGAAG | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGSHRNS*VIRAPK Trigger: CTTCGGTGCCCTGATGACTCAGCTGTTTCTATGGGA...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATACTCTGCTGCCTTCCATaGCTCGATTTCATTCAAGGG | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGILCCLP*LDFIQG Trigger: CCCTTGAATGAAATCGAGGCATGGAAGGCAGCAGAG...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATATGGGCAGAGGGCTCTTaGGTGTGGGTGTCATTATTT | + |
Preference number: 4 (lower is better) Translates to: GGGGSSRSIVESTEPHGIWAEGS*VWVSLF Trigger: AAATAATGACACCCACACGCAAGAGCCCTCTGCCCA...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGAGTCCATGTTGGCACTaGCCAGGTAGAAGTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: EYSGEYRATRDRQRQGHGSPCWH*PGRSGS Trigger: AGACCCACTTCTACCTGGGCAGTGCCAACATGGACT...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGTCCATGTTGGCACTaGCCAGGTAGAAGTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: GGGSSRSIVESTEPHGIDSPCWH*PGRSGS Trigger: AGACCCACTTCTACCTGGGCAGTGCCAACATGGACT...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGTGGGATGGAGCTACCTaGCTGGCCCAGGAACCAATA | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMWDGAT*LAQEPI Trigger: TATTGGTTCCTGGGCCAGGCAGGTAGCTCCATCCCA...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGGAAGGACCGCATCGATaGATCAGAGTGTCCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMEGPHR*IRVSPA Trigger: TGCTGGGGACACTCTGATCCATCGATGCGGTCCTTC...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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3UTR CAA 72 bp | CTGAAGAACCTCTTCACCCTGCTGGGCAGAGGGCTCTaGCGTGTGGGTGTCATTATTTGTGAGGGTCCAGTA | + |
Preference number: 4 (lower is better) Translates to: LKNLFTLLGRGL*RVGVIICEGPV Trigger: TACTGGACCCTCACAAATAATGACACCCACACGCAAGAGCCCTCTGCCCAGCAGGGTGAAGAGGTTCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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CDS-3UTR CCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGCATTGCCCACACTGTTaGCTGAGGTGTCGAGATCGT | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMHCPHC*LRCRDR Trigger: ACGATCTCGACACCTCAGCCAACAGTGTGGGCAATG...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGCTCTGCTGCCTTCCATaGCTCGATTTCATTCAAGGG | + |
Preference number: 4 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMLCCLP*LDFIQG Trigger: CCCTTGAATGAAATCGAGGCATGGAAGGCAGCAGAG...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTAGGCCCAACCAGGCCTaGCTAGTGGAGGGGTTGCTC | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSRPNQA*LVEGLL Trigger: GAGCAACCCCTCCACTAGCCAGGCCTGGTTGGGCCT...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTCCTTCAGGTCTGGGGTaGGGCCACTTGGACACAGTG | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSPSGLG*GHLDTV Trigger: CACTGTGTCCAAGTGGCCGCACCCCAGACCTGAAGG...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGAGCTGGGGTGCCATTaGGGCAGATCTCCATTGGTG | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSELGCH*GRSPLV Trigger: CACCAATGGAGATCTGCCTCAATGGCACCCCAGCTC...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTATGCGATGTCCAGGCTaGTGTGAGCACCGGCAAGGA | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSMRCPG*CEHRQG Trigger: TCCTTGCCGGTGCTCACAGCAGCCTGGACATCGCAT...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTTCCACCATGCGGACCTaGGCACCACTCTGTAGCAGA | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSSTMRT*APLCSR Trigger: TCTGCTACAGAGTGGTGCCCAGGTCCGCATGGTGGA...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACGAGGCAGATCTCCATTaGTGTTTCTTGATTATATCG | + |
Preference number: 4 (lower is better) Translates to: GGGSSRSIVESTEPHGIDEADLH*CFLIIS Trigger: CGATATAATCAAGAAACACCAATGGAGATCTGCCTC...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR GCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTCTCTGTAGCAGAGACTaGAGATCAGCCAGAGGCCCA | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSLCSRD*RSARGP Trigger: TGGGCCTCTGGCTGATCTGCAGTCTCTGCTACAGAG...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTCCACCACCCAGAACTTaGTGTGCAGGACACCATGAG | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSPPPRT*CAGHHE Trigger: CTCATGGTGTCCTGCACACCAAGTTCTGGGTGGTGG...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTTCCCATAGAAACAGCTaGGTCATCAGGGCACCGAAG | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSSHRNS*VIRAPK Trigger: CTTCGGTGCCCTGATGACTCAGCTGTTTCTATGGGA...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGCACCTTCAGCTCCTaGTACATCAGTTTGGGCTTC | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSGTFSS*YISLGF Trigger: GAAGCCCAAACTGATGTACCAGGAGCTGAAGGTGCC...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTTGTACTTGTTGTGGTTaGCACGGGCATAGGGGATTC | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSCTCCG*HGHRGF Trigger: GAATCCCCTATGCCCGTGTCAACCACAACAAGTACA...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGAGGGCTCTTGCGTGTaGGTGTCATTATTTGTGAGG | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSEGSCV*VSLFVR Trigger: CCTCACAAATAATGACACCCACACGCAAGAGCCCTC...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR TCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTTCCATTGGTGTTTCTTaGTTATATCGGGTGTCAAAG | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSSIGVS*LYRVSK Trigger: CTTTGACACCCGATATAATCAAGAAACACCAATGGA...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CCA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGAGGCAGATCTCCATTaGTGTTTCTTGATTATATCG | + |
Preference number: 4 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSEADLH*CFLIIS Trigger: CGATATAATCAAGAAACACCAATGGAGATCTGCCTC...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGCTGGGGTGCGGCCACTaGGACACAGTGGTGGGGGTG | + |
Preference number: 5 (lower is better) Translates to: PSSARSTGARVSGQWRWRLGCGH*DTVVGV Trigger: CACCCCCACCACTGTGTCCAAGTGGCCGCACCCCAG...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGTGGCTAGTGGAGGGGTaGCTCGTGGTGGCATTGGGA | + |
Preference number: 5 (lower is better) Translates to: PSSARSTGARVSGQWRWRWLVEG*LVVALG Trigger: TCCCAATGCCACCACGAGCAACCCCTCCACTAGCCA...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | CCACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCACCACGCCCAGCTCCTaGACCTGGGTCAGCGACCGC | + |
Preference number: 5 (lower is better) Translates to: PHGIDRGKGMGTVTRTQSTTPSS*TWVSDR Trigger: GCGGTCGCTGACCCAGGTCAAGGAGCTGGGCGTGGT...GCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGAGAGCTGGGGTGCCATaGAGGCAGATCTCCATTGGT | + |
Preference number: 5 (lower is better) Translates to: PSSARSTGARVSGQWRWRRAGVP*RQISIG Trigger: ACCAATGGAGATCTGCCTCAATGGCACCCCAGCTCT...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | ACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTGGCGAGGCAGCTGCAGTaGTACATGACCACGCCCAGC | + |
Preference number: 5 (lower is better) Translates to: TRDRQRQGHGDSNQDPELARQLQ*YMTTPS Trigger: GCTGGGCGTGGTCATGTACAACTGCAGCTGCCTCGC...CAGCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGCTGGGGTGCGGCCACTaGGACACAGTGGTGGGGGTG | + |
Preference number: 5 (lower is better) Translates to: EYSGEYRATRDRQRQGHGLGCGH*DTVVGV Trigger: CACCCCCACCACTGTGTCCAAGTGGCCGCACCCCAG...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 90 bp | CGCCAGGATCAGGACCAGGAGGACCCAGCGGGCTTTCTTCTCTGCTaGCTTCCATGCCTCGATTTCATTCAAGGGCAGTTCTCCCGCAGG | + |
Preference number: 5 (lower is better) Translates to: RQDQDQEDPAGFLLC*LPCLDFIQGQFSRR Trigger: CCTGCGGGAGAACTGCCCTTGAATGAAATCGAGGCATGGAAGGCAGCAGAGAAGAAAGCCCGCTGGGTCCTCCTGGTCCTGATCCTGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 ENSMUST00000127240.8 ENSMUST00000150964.2 |
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CDS-3UTR CAA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAAGGACCGCGGCCAGGTaGATGGGATGGAGCTACCTG | + |
Preference number: 5 (lower is better) Translates to: GGGGSSRSIVESTEPHGIRTAAR*MGWSYL Trigger: CAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCCT...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | CCACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCGCATTGCCCACACTGTaGGCTGAGGTGTCGAGATCG | + |
Preference number: 5 (lower is better) Translates to: PHGIDRGKGMGTVTRTQSALPTL*AEVSRS Trigger: CGATCTCGACACCTCAGCCAACAGTGTGGGCAATGC...GCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAAGCAGGCGGCAGGCATaGCCCACACTGTTGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: GGGGSSRSIVESTEPHGISRRQA*PTLLAE Trigger: CTCAGCCAACAGTGTGGGCAATGCCTGCCGCCTGCT...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 90 bp | TGGCTGTATGGGGATTCCCAGTCTCTCAGGAAAACAGCCTCCAGCTaGCTGCGCAAGCCACCATGCCCGTTCTGTGTCACCAGCAGGGAG | + |
Preference number: 5 (lower is better) Translates to: WLYGDSQSLRKTASS*LRKPPCPFCVTSRE Trigger: CTCCCTGCTGGTGACACAGAACGGGCATGGTGGCTTGCGCAGTCAGCTGGAGGCTGTTTTCCTGAGAGACTGGGAATCCCCATACAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 90 bp | TACCGCCAGGATCAGGACCAGGAGGACCCAGCGGGCTTTCTTCTCTaGTGCCTTCCATGCCTCGATTTCATTCAAGGGCAGTTCTCCCGC | + |
Preference number: 5 (lower is better) Translates to: YRQDQDQEDPAGFLL*CLPCLDFIQGQFSR Trigger: GCGGGAGAACTGCCCTTGAATGAAATCGAGGCATGGAAGGCAGCAGAGAAGAAAGCCCGCTGGGTCCTCCTGGTCCTGATCCTGGCGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 ENSMUST00000127240.8 ENSMUST00000150964.2 |
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CDS GCA 90 bp | GGGTTTGCTCACAGCGATGCGAACCTTTACACCTCGAGGTGCCAGTaGCTGAAGCTGCTGAAGAACCTCTTCACCCTGCTGGGCAGAGGG | + |
Preference number: 5 (lower is better) Translates to: GFAHSDANLYTSRCQ*LKLLKNLFTLLGRG Trigger: CCCTCTGCCCAGCAGGGTGAAGAGGTTCTTCAGCAGCTTCAGGCACTGGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 90 bp | GCGCAAGCCACCATGCCCGTTCTGTGTCACCAGCAGGGAGGTGCCTaGTGTCTCCGTGAAGTAGCTTCCAGACCAGTTGGAGGTTCCAAT | + |
Preference number: 5 (lower is better) Translates to: AQATMPVLCHQQGGA*CLREVASRPVGGSN Trigger: ATTGGAACCTCCAACTGGTCTGGAAGCTACTTCACGGAGACAGCAGGCACCTCCCTGCTGGTGACACAGAACGGGCATGGTGGCTTGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 90 bp | TGTATGGGGATTCCCAGTCTCTCAGGAAAACAGCCTCCAGCTGACTaGGCAAGCCACCATGCCCGTTCTGTGTCACCAGCAGGGAGGTGC | + |
Preference number: 5 (lower is better) Translates to: CMGIPSLSGKQPPAD*ASHHARSVSPAGRC Trigger: GCACCTCCCTGCTGGTGACACAGAACGGGCATGGTGGCTTGCGCAGTCAGCTGGAGGCTGTTTTCCTGAGAGACTGGGAATCCCCATACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 90 bp | AGGCGGCAGGCATTGCCCACACTGTTGGCTGAGGTGTCGAGATCGTaGCTGTATGGGGATTCCCAGTCTCTCAGGAAAACAGCCTCCAGC | + |
Preference number: 5 (lower is better) Translates to: RRQALPTLLAEVSRS*LYGDSQSLRKTASS Trigger: GCTGGAGGCTGTTTTCCTGAGAGACTGGGAATCCCCATACAGCCACGATCTCGACACCTCAGCCAACAGTGTGGGCAATGCCTGCCGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | ACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTGTCAGCCAGAGGCCCATaGGGTTTGCTCACAGCGATG | + |
Preference number: 5 (lower is better) Translates to: TRDRQRQGHGDSNQDPELSARGP*GLLTAM Trigger: CATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGA...CAGCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGGCGAGGCAGCTGCAGTaGTACATGACCACGCCCAGC | + |
Preference number: 5 (lower is better) Translates to: EYSGEYRATRDRQRQGHGARQLQ*YMTTPS Trigger: GCTGGGCGTGGTCATGTACAACTGCAGCTGCCTCGC...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | CCACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCAGAGCTGGGGTGCCATaGAGGCAGATCTCCATTGGT | + |
Preference number: 5 (lower is better) Translates to: PHGIDRGKGMGTVTRTQSRAGVP*RQISIG Trigger: ACCAATGGAGATCTGCCTCAATGGCACCCCAGCTCT...GCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 90 bp | CCCATTGGGTTTGCTCACAGCGATGCGAACCTTTACACCTCGAGGTaGCAGTGCCTGAAGCTGCTGAAGAACCTCTTCACCCTGCTGGGC | + |
Preference number: 5 (lower is better) Translates to: PIGFAHSDANLYTSR*QCLKLLKNLFTLLG Trigger: GCCCAGCAGGGTGAAGAGGTTCTTCAGCAGCTTCAGGCACTGGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 90 bp | TCAGGAATGCTCTCCACCAGCACCGCCCTTCTCTGCTGCCTTCCATaGCTCGATTTCATTCAAGGGCAGTTCTCCCGCAGGCTCCTCAAC | + |
Preference number: 5 (lower is better) Translates to: SGMLSTSTALLCCLP*LDFIQGQFSRRLLN Trigger: GTTGAGGAGCCTGCGGGAGAACTGCCCTTGAATGAAATCGAGGCATGGAAGGCAGCAGAGAAGGGCGGTGCTGGTGGAGAGCATTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131106.8 |
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CDS CCA 90 bp | GGGCACCACTCTGTAGCAGAGACTGCAGATCAGCCAGAGGCCCATTaGGTTTGCTCACAGCGATGCGAACCTTTACACCTCGAGGTGCCA | + |
Preference number: 5 (lower is better) Translates to: GHHSVAETADQPEAH*VCSQRCEPLHLEVP Trigger: TGGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTCTGCTACAGAGTGGTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 90 bp | GTTGTCATGAAGTGCAGCCAGGGAGAGCAGGAAGGACCGCATCGATaGATCAGAGTGTCCCCAGCAGCTGATGAGCAGGCGCACTTTGAC | + |
Preference number: 5 (lower is better) Translates to: VVMKCSQGEQEGPHR*IRVSPAADEQAHFD Trigger: GTCAAAGTGCGCCTGCTCATCAGCTGCTGGGGACACTCTGATCCATCGATGCGGTCCTTCCTGCTCTCCCTGGCTGCACTTCATGACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACTGGCTAGTGGAGGGGTaGCTCGTGGTGGCATTGGGA | + |
Preference number: 5 (lower is better) Translates to: GGGSSRSIVESTEPHGIDWLVEG*LVVALG Trigger: TCCCAATGCCACCACGAGCAACCCCTCCACTAGCCA...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATATCAGCCAGAGGCCCATaGGGTTTGCTCACAGCGATG | + |
Preference number: 5 (lower is better) Translates to: GGGGSSRSIVESTEPHGISARGP*GLLTAM Trigger: CATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGA...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGAGCAGGCGGCAGGCATaGCCCACACTGTTGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMSRRQA*PTLLAE Trigger: CTCAGCCAACAGTGTGGGCAATGCCTGCCGCCTGCT...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 90 bp | CATGCCCGTTCTGTGTCACCAGCAGGGAGGTGCCTGCTGTCTCCGTaGAGTAGCTTCCAGACCAGTTGGAGGTTCCAATGTATGAGGCAC | + |
Preference number: 5 (lower is better) Translates to: HARSVSPAGRCLLSP*SSFQTSWRFQCMRH Trigger: GTGCCTCATACATTGGAACCTCCAACTGGTCTGGAAGCTACTTCACGGAGACAGCAGGCACCTCCCTGCTGGTGACACAGAACGGGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 90 bp | GAGACTGCAGATCAGCCAGAGGCCCATTGGGTTTGCTCACAGCGATaGGAACCTTTACACCTCGAGGTGCCAGTGCCTGAAGCTGCTGAA | + |
Preference number: 5 (lower is better) Translates to: ETADQPEAHWVCSQR*EPLHLEVPVPEAAE Trigger: TTCAGCAGCTTCAGGCACTGGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 90 bp | CACTCTGTAGCAGAGACTGCAGATCAGCCAGAGGCCCATTGGGTTTaGTCACAGCGATGCGAACCTTTACACCTCGAGGTGCCAGTGCCT | + |
Preference number: 5 (lower is better) Translates to: HSVAETADQPEAHWV*SQRCEPLHLEVPVP Trigger: AGGCACTGGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTCTGCTACAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 90 bp | ACTTGGTGTGCAGGACACCATGAGTCAGCTTCTGCATGTCCACCATaGGGACCTGGGCACCACTCTGTAGCAGAGACTGCAGATCAGCCA | + |
Preference number: 5 (lower is better) Translates to: TWCAGHHESASACPP*GPGHHSVAETADQP Trigger: TGGCTGATCTGCAGTCTCTGCTACAGAGTGGTGCCCAGGTCCGCATGGTGGACATGCAGAAGCTGACTCATGGTGTCCTGCACACCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCCCATTGGGTTaGCTCACAGCGATGCGAACC | + |
Preference number: 5 (lower is better) Translates to: GGGSSRSIVESTEPHGIDRGPLG*LTAMRT Trigger: GGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCT...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | CCCAGCTCTGCTAGGTCCACAGGGGCCAGAGTGTCAGGCCAGTGGCGGTGGAGGCTCCATTGGTGTTTCTaGATTATATCGGGTGTCAAA | + |
Preference number: 5 (lower is better) Translates to: PSSARSTGARVSGQWRWRLHWCF*IISGVK Trigger: TTTGACACCCGATATAATCAAGAAACACCAATGGAG...CCTCCACCGCCACTGGCCTGACACTCTGGCCCCTGTGGACCTAGCAGAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGGCACTGTCCACCACGTaGAGCAGAGCCTTCAGGTCT | + |
Preference number: 5 (lower is better) Translates to: EYSGEYRATRDRQRQGHGALSTT*SRAFRS Trigger: AGACCTGAAGGCTCTGCTCAACGTGGTGGACAGTGC...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAATGAGCAGGCGCACTTaGACGCCTCGTTCATACGCA | + |
Preference number: 5 (lower is better) Translates to: GGGGSSRSIVESTEPHGIMSRRT*TPRSYA Trigger: TGCGTATGAACGAGGCGTCAAAGTGCGCCTGCTCAT...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | CCACACGGGATAGACAGAGGCAAGGGCATGGGGACAGTAACCAGGACCCAGAGCTCAGTCACCATGTACTaGTTGTGGTTGACACGGGCA | + |
Preference number: 5 (lower is better) Translates to: PHGIDRGKGMGTVTRTQSSVTMY*LWLTRA Trigger: TGCCCGTGTCAACCACAACAAGTACATGGTGACTGA...GCTCTGGGTCCTGGTTACTGTCCCCATGCCCTTGCCTCTGTCTATCCCGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACGCATTGCCCACACTGTaGGCTGAGGTGTCGAGATCG | + |
Preference number: 5 (lower is better) Translates to: GGGSSRSIVESTEPHGIDALPTL*AEVSRS Trigger: CGATCTCGACACCTCAGCCAACAGTGTGGGCAATGC...GTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGAGAGGCCCATTGGGTTaGCTCACAGCGATGCGAACC | + |
Preference number: 5 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMRGPLG*LTAMRT Trigger: GGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCT...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGGCACTGTCCACCACGTaGAGCAGAGCCTTCAGGTCT | + |
Preference number: 5 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMALSTT*SRAFRS Trigger: AGACCTGAAGGCTCTGCTCAACGTGGTGGACAGTGC...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGATGAGCAGGCGCACTTaGACGCCTCGTTCATACGCA | + |
Preference number: 5 (lower is better) Translates to: EYSGEYRATRDRQRQGHGMSRRT*TPRSYA Trigger: TGCGTATGAACGAGGCGTCAAAGTGCGCCTGCTCAT...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 90 bp | TGGTGTTTCTTGATTATATCGGGTGTCAAAGGACCGCGGCCAGGTTaGTGGGATGGAGCTACCTGCCTGGCCCAGGAACCAATAGGCTTC | + |
Preference number: 5 (lower is better) Translates to: WCFLIISGVKGPRPG*WDGATCLAQEPIGF Trigger: GAAGCCTATTGGTTCCTGGGCCAGGCAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCCTTTGACACCCGATATAATCAAGAAACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 90 bp | GCCAGAGCTGGGGTGCCATTGAGGCAGATCTCCATTGGTGTTTCTTaGTTATATCGGGTGTCAAAGGACCGCGGCCAGGTTGATGGGATG | + |
Preference number: 5 (lower is better) Translates to: ARAGVPLRQISIGVS*LYRVSKDRGQVDGM Trigger: CATCCCATCAACCTGGCCGCGGTCCTTTGACACCCGATATAATCAAGAAACACCAATGGAGATCTGCCTCAATGGCACCCCAGCTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 90 bp | GTGGTGGGGGTGCACTCGCTAGGTAGGCCAGAGCTGGGGTGCCATTaGGGCAGATCTCCATTGGTGTTTCTTGATTATATCGGGTGTCAA | + |
Preference number: 5 (lower is better) Translates to: VVGVHSLGRPELGCH*GRSPLVFLDYIGCQ Trigger: TTGACACCCGATATAATCAAGAAACACCAATGGAGATCTGCCTCAATGGCACCCCAGCTCTGGCCTACCTAGCGAGTGCACCCCCACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGTTGCTCGTGGTGGCATaGGGAAACTCCAGACCCTCA | + |
Preference number: 5 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMLLVVA*GNSRPS Trigger: TGAGGGTCTGGAGTTTCCCAATGCCACCACGAGCAA...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GGCGGTGGAGGTAGCAGCAGGAGTATAGTGGAGAGTACAGAGCCACACGGGATATCAGTCACCATGTACTaGTTGTGGTTGACACGGGCA | + |
Preference number: 5 (lower is better) Translates to: GGGGSSRSIVESTEPHGISVTMY*LWLTRA Trigger: TGCCCGTGTCAACCACAACAAGTACATGGTGACTGA...TATCCCGTGTGGCTCTGTACTCTCCACTATACTCCTGCTGCTACCTCCACCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 90 bp | CTTGATTATATCGGGTGTCAAAGGACCGCGGCCAGGTTGATGGGATaGAGCTACCTGCCTGGCCCAGGAACCAATAGGCTTCAAAGATCT | + |
Preference number: 5 (lower is better) Translates to: LDYIGCQRTAARLMG*SYLPGPGTNRLQRS Trigger: AGATCTTTGAAGCCTATTGGTTCCTGGGCCAGGCAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCCTTTGACACCCGATATAATCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | GAGTATAGTGGAGAGTACAGAGCCACACGGGATAGACAGAGGCAAGGGCATGGGGGGCTGGGCGCTGATTaGGTCCAAATAGATGTAAGT | + |
Preference number: 5 (lower is better) Translates to: EYSGEYRATRDRQRQGHGGLGAD*VQIDVS Trigger: ACTTACATCTATTTGGACCAAATCAGCGCCCAGCCC...CCCATGCCCTTGCCTCTGTCTATCCCGTGTGGCTCTGTACTCTCCACTATACTC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTAGGACCGCGGCCAGGTaGATGGGATGGAGCTACCTG | + |
Preference number: 5 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSRTAAR*MGWSYL Trigger: CAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCCT...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | TACAGACAATTATTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTTTGCTCGTGGTGGCATaGGGAAACTCCAGACCCTCA | + |
Preference number: 5 (lower is better) Translates to: YRQLFTYNLGPLGVGQRSLLVVA*GNSRPS Trigger: TGAGGGTCTGGAGTTTCCCAATGCCACCACGAGCAA...AGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAATAATTGTCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS-3UTR CAA 90 bp | TTTACTTATAATCTTGGCCCTTTGGGGGTGGGCCAAAGGTCTGGGCCCAGCATGCTCCATTGGTGTTTCTaGATTATATCGGGTGTCAAA | + |
Preference number: 5 (lower is better) Translates to: FTYNLGPLGVGQRSGPSMLHWCF*IISGVK Trigger: TTTGACACCCGATATAATCAAGAAACACCAATGGAG...CATGCTGGGCCCAGACCTTTGGCCCACCCCCAAAGGGCCAAGATTATAAGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 72 bp | GGCACTGTCCACCACGTTGAGCAGAGCCTTCAGGTCTaGGGTGCGGCCACTTGGACACAGTGGTGGGGGTGC | + |
Preference number: 6 (lower is better) Translates to: GTVHHVEQSLQV*GAATWTQWWGC Trigger: GCACCCCCACCACTGTGTCCAAGTGGCCGCACCCCAGACCTGAAGGCTCTGCTCAACGTGGTGGACAGTGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 90 bp | AGGCCCAACCAGGCCTGGCTAGTGGAGGGGTTGCTCGTGGTGGCATaGGGAAACTCCAGACCCTCAGGAATGCTCTCCACCAGCACCGCC | + |
Preference number: 6 (lower is better) Translates to: RPNQAWLVEGLLVVA*GNSRPSGMLSTSTA Trigger: GGCGGTGCTGGTGGAGAGCATTCCTGAGGGTCTGGAGTTTCCCAATGCCACCACGAGCAACCCCTCCACTAGCCAGGCCTGGTTGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 72 bp | TCGTGGTGGCATTGGGAAACTCCAGACCCTCAGGAATaGTCTCCACCAGCACCGCCTCGCAGGGGTCATAGC | + |
Preference number: 6 (lower is better) Translates to: SWWHWETPDPQE*SPPAPPRRGHS Trigger: GCTATGACCCCTGCGAGGCGGTGCTGGTGGAGAGCATTCCTGAGGGTCTGGAGTTTCCCAATGCCACCACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 ENSMUST00000127240.8 |
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CDS CAA 72 bp | CAGGCCTGGCTAGTGGAGGGGTTGCTCGTGGTGGCATaGGGAAACTCCAGACCCTCAGGAATGCTCTCCACC | + |
Preference number: 6 (lower is better) Translates to: QAWLVEGLLVVA*GNSRPSGMLST Trigger: GGTGGAGAGCATTCCTGAGGGTCTGGAGTTTCCCAATGCCACCACGAGCAACCCCTCCACTAGCCAGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 72 bp | AAGATCTTGGTGAGGTCCCGGGCGAGGCAGCTGCAGTaGTACATGACCACGCCCAGCTCCTTGACCTGGGTC | + |
Preference number: 6 (lower is better) Translates to: KILVRSRARQLQ*YMTTPSSLTWV Trigger: GACCCAGGTCAAGGAGCTGGGCGTGGTCATGTACAACTGCAGCTGCCTCGCCCGGGACCTCACCAAGATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 72 bp | GGGGATTCCCAGTCTCTCAGGAAAACAGCCTCCAGCTaGCTGCGCAAGCCACCATGCCCGTTCTGTGTCACC | + |
Preference number: 6 (lower is better) Translates to: GDSQSLRKTASS*LRKPPCPFCVT Trigger: GGTGACACAGAACGGGCATGGTGGCTTGCGCAGTCAGCTGGAGGCTGTTTTCCTGAGAGACTGGGAATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 72 bp | ATCGGGTGTCAAAGGACCGCGGCCAGGTTGATGGGATaGAGCTACCTGCCTGGCCCAGGAACCAATAGGCTT | + |
Preference number: 6 (lower is better) Translates to: IGCQRTAARLMG*SYLPGPGTNRL Trigger: AAGCCTATTGGTTCCTGGGCCAGGCAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCCTTTGACACCCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 90 bp | CCACTCTGTAGCAGAGACTGCAGATCAGCCAGAGGCCCATTGGGTTaGCTCACAGCGATGCGAACCTTTACACCTCGAGGTGCCAGTGCC | + |
Preference number: 6 (lower is better) Translates to: PLCSRDCRSARGPLG*LTAMRTFTPRGASA Trigger: GGCACTGGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTCTGCTACAGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 90 bp | TGGGCACCACTCTGTAGCAGAGACTGCAGATCAGCCAGAGGCCCATaGGGTTTGCTCACAGCGATGCGAACCTTTACACCTCGAGGTGCC | + |
Preference number: 6 (lower is better) Translates to: WAPLCSRDCRSARGP*GLLTAMRTFTPRGA Trigger: GGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTCTGCTACAGAGTGGTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 72 bp | TCAAAGCAGGCGGCAGGCATTGCCCACACTGTTGGCTaGGGTGTCGAGATCGTGGCTGTATGGGGATTCCCA | + |
Preference number: 6 (lower is better) Translates to: SKQAAGIAHTVG*GVEIVAVWGFP Trigger: TGGGAATCCCCATACAGCCACGATCTCGACACCTCAGCCAACAGTGTGGGCAATGCCTGCCGCCTGCTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 72 bp | ACCATGCGGACCTGGGCACCACTCTGTAGCAGAGACTaGAGATCAGCCAGAGGCCCATTGGGTTTGCTCACA | + |
Preference number: 6 (lower is better) Translates to: TMRTWAPLCSRD*RSARGPLGLLT Trigger: TGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTCTGCTACAGAGTGGTGCCCAGGTCCGCATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 72 bp | ACCATGCCCGTTCTGTGTCACCAGCAGGGAGGTGCCTaGTGTCTCCGTGAAGTAGCTTCCAGACCAGTTGGA | + |
Preference number: 6 (lower is better) Translates to: TMPVLCHQQGGA*CLREVASRPVG Trigger: TCCAACTGGTCTGGAAGCTACTTCACGGAGACAGCAGGCACCTCCCTGCTGGTGACACAGAACGGGCATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 72 bp | CTTGATTATATCGGGTGTCAAAGGACCGCGGCCAGGTaGATGGGATGGAGCTACCTGCCTGGCCCAGGAACC | + |
Preference number: 6 (lower is better) Translates to: LDYIGCQRTAAR*MGWSYLPGPGT Trigger: GGTTCCTGGGCCAGGCAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCCTTTGACACCCGATATAATCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 72 bp | TTGATTATATCGGGTGTCAAAGGACCGCGGCCAGGTTaGTGGGATGGAGCTACCTGCCTGGCCCAGGAACCA | + |
Preference number: 6 (lower is better) Translates to: LIISGVKGPRPG*WDGATCLAQEP Trigger: TGGTTCCTGGGCCAGGCAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCCTTTGACACCCGATATAATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 72 bp | CAGGACCAGGAGGACCCAGCGGGCTTTCTTCTCTGCTaGCTTCCATGCCTCGATTTCATTCAAGGGCAGTTC | + |
Preference number: 6 (lower is better) Translates to: QDQEDPAGFLLC*LPCLDFIQGQF Trigger: GAACTGCCCTTGAATGAAATCGAGGCATGGAAGGCAGCAGAGAAGAAAGCCCGCTGGGTCCTCCTGGTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 ENSMUST00000127240.8 ENSMUST00000150964.2 |
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CDS GCA 72 bp | GATCAGGACCAGGAGGACCCAGCGGGCTTTCTTCTCTaGTGCCTTCCATGCCTCGATTTCATTCAAGGGCAG | + |
Preference number: 6 (lower is better) Translates to: DQDQEDPAGFLL*CLPCLDFIQGQ Trigger: CTGCCCTTGAATGAAATCGAGGCATGGAAGGCAGCAGAGAAGAAAGCCCGCTGGGTCCTCCTGGTCCTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 ENSMUST00000127240.8 ENSMUST00000150964.2 |
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CDS GCA 72 bp | CACAGCGATGCGAACCTTTACACCTCGAGGTGCCAGTaGCTGAAGCTGCTGAAGAACCTCTTCACCCTGCTG | + |
Preference number: 6 (lower is better) Translates to: HSDANLYTSRCQ*LKLLKNLFTLL Trigger: CAGCAGGGTGAAGAGGTTCTTCAGCAGCTTCAGGCACTGGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 72 bp | GATCAGCCAGAGGCCCATTGGGTTTGCTCACAGCGATaGGAACCTTTACACCTCGAGGTGCCAGTGCCTGAA | + |
Preference number: 6 (lower is better) Translates to: DQPEAHWVCSQR*EPLHLEVPVPE Trigger: TTCAGGCACTGGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 72 bp | GCAGAGACTGCAGATCAGCCAGAGGCCCATTGGGTTTaGTCACAGCGATGCGAACCTTTACACCTCGAGGTG | + |
Preference number: 6 (lower is better) Translates to: AETADQPEAHWV*SQRCEPLHLEV Trigger: CACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 72 bp | TTCATACGCAGCCCGTCTCAGCCCATCATCGATCGCTaGCCAGAACCTGCGTGGATGAGAGAACTCCATGGT | + |
Preference number: 6 (lower is better) Translates to: FIRSPSQPIIDR*PEPAWMRELHG Trigger: ACCATGGAGTTCTCTCATCCACGCAGGTTCTGGCCAGCGATCGATGATGGGCTGAGACGGGCTGCGTATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 72 bp | TCTGTGTCACCAGCAGGGAGGTGCCTGCTGTCTCCGTaGAGTAGCTTCCAGACCAGTTGGAGGTTCCAATGT | + |
Preference number: 6 (lower is better) Translates to: SVSPAGRCLLSP*SSFQTSWRFQC Trigger: ACATTGGAACCTCCAACTGGTCTGGAAGCTACTTCACGGAGACAGCAGGCACCTCCCTGCTGGTGACACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 72 bp | AGCAGAGACTGCAGATCAGCCAGAGGCCCATTGGGTTaGCTCACAGCGATGCGAACCTTTACACCTCGAGGT | + |
Preference number: 6 (lower is better) Translates to: SRDCRSARGPLG*LTAMRTFTPRG Trigger: ACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 90 bp | CTGAAGCTGCTGAAGAACCTCTTCACCCTGCTGGGCAGAGGGCTCTaGCGTGTGGGTGTCATTATTTGTGAGGGTCCAGTAGAAGGATGC | + |
Preference number: 6 (lower is better) Translates to: LKLLKNLFTLLGRGL*RVGVIICEGPVEGC Trigger: GCATCCTTCTACTGGACCCTCACAAATAATGACACCCACACGCAAGAGCCCTCTGCCCAGCAGGGTGAAGAGGTTCTTCAGCAGCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 72 bp | ATGAGGCACGTTCAGTCACCATGTACTTGTTGTGGTTaGCACGGGCATAGGGGATTCGGGCCTGGGACTCAT | + |
Preference number: 6 (lower is better) Translates to: MRHVQSPCTCCG*HGHRGFGPGTH Trigger: ATGAGTCCCAGGCCCGAATCCCCTATGCCCGTGTCAACCACAACAAGTACATGGTGACTGAACGTGCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS GCA 72 bp | TTTGCTCACAGCGATGCGAACCTTTACACCTCGAGGTaGCAGTGCCTGAAGCTGCTGAAGAACCTCTTCACC | + |
Preference number: 6 (lower is better) Translates to: FAHSDANLYTSR*QCLKLLKNLFT Trigger: GGTGAAGAGGTTCTTCAGCAGCTTCAGGCACTGGCACCTCGAGGTGTAAAGGTTCGCATCGCTGTGAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 72 bp | TCTGTAGCAGAGACTGCAGATCAGCCAGAGGCCCATTaGGTTTGCTCACAGCGATGCGAACCTTTACACCTC | + |
Preference number: 6 (lower is better) Translates to: SVAETADQPEAH*VCSQRCEPLHL Trigger: GAGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTCTGCTACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 72 bp | CCAGGTAGAAGTGGGTCTGATCCACCACCCAGAACTTaGTGTGCAGGACACCATGAGTCAGCTTCTGCATGT | + |
Preference number: 6 (lower is better) Translates to: PGRSGSDPPPRT*CAGHHESASAC Trigger: ACATGCAGAAGCTGACTCATGGTGTCCTGCACACCAAGTTCTGGGTGGTGGATCAGACCCACTTCTACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 72 bp | GCATTGCCCACACTGTTGGCTGAGGTGTCGAGATCGTaGCTGTATGGGGATTCCCAGTCTCTCAGGAAAACA | + |
Preference number: 6 (lower is better) Translates to: ALPTLLAEVSRS*LYGDSQSLRKT Trigger: TGTTTTCCTGAGAGACTGGGAATCCCCATACAGCCACGATCTCGACACCTCAGCCAACAGTGTGGGCAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 72 bp | CTCTGTAGCAGAGACTGCAGATCAGCCAGAGGCCCATaGGGTTTGCTCACAGCGATGCGAACCTTTACACCT | + |
Preference number: 6 (lower is better) Translates to: LCSRDCRSARGP*GLLTAMRTFTP Trigger: AGGTGTAAAGGTTCGCATCGCTGTGAGCAAACCCAATGGGCCTCTGGCTGATCTGCAGTCTCTGCTACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 90 bp | TTGGTGTTTCTTGATTATATCGGGTGTCAAAGGACCGCGGCCAGGTaGATGGGATGGAGCTACCTGCCTGGCCCAGGAACCAATAGGCTT | + |
Preference number: 6 (lower is better) Translates to: LVFLDYIGCQRTAAR*MGWSYLPGPGTNRL Trigger: AAGCCTATTGGTTCCTGGGCCAGGCAGGTAGCTCCATCCCATCAACCTGGCCGCGGTCCTTTGACACCCGATATAATCAAGAAACACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 72 bp | GGGGTGCCATTGAGGCAGATCTCCATTGGTGTTTCTTaGTTATATCGGGTGTCAAAGGACCGCGGCCAGGTT | + |
Preference number: 6 (lower is better) Translates to: GVPLRQISIGVS*LYRVSKDRGQV Trigger: AACCTGGCCGCGGTCCTTTGACACCCGATATAATCAAGAAACACCAATGGAGATCTGCCTCAATGGCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CCA 72 bp | GGCCAGAGCTGGGGTGCCATTGAGGCAGATCTCCATTaGTGTTTCTTGATTATATCGGGTGTCAAAGGACCG | + |
Preference number: 6 (lower is better) Translates to: GQSWGAIEADLH*CFLIISGVKGP Trigger: CGGTCCTTTGACACCCGATATAATCAAGAAACACCAATGGAGATCTGCCTCAATGGCACCCCAGCTCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS CAA 72 bp | TGGGGTGCCATTGAGGCAGATCTCCATTGGTGTTTCTaGATTATATCGGGTGTCAAAGGACCGCGGCCAGGT | + |
Preference number: 6 (lower is better) Translates to: WGAIEADLHWCF*IISGVKGPRPG Trigger: ACCTGGCCGCGGTCCTTTGACACCCGATATAATCAAGAAACACCAATGGAGATCTGCCTCAATGGCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |
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CDS TCA 72 bp | GTGCACTCGCTAGGTAGGCCAGAGCTGGGGTGCCATTaGGGCAGATCTCCATTGGTGTTTCTTGATTATATC | + |
Preference number: 6 (lower is better) Translates to: VHSLGRPELGCH*GRSPLVFLDYI Trigger: GATATAATCAAGAAACACCAATGGAGATCTGCCTCAATGGCACCCCAGCTCTGGCCTACCTAGCGAGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117095.8 ENSMUST00000117611.8 |