Pregenerated sensors for PLCZ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030230Ensembl transcript IDs: ENSMUST00000032356.13, ENSMUST00000129986.8, ENSMUST00000137148.8, ENSMUST00000149931.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACAGGCAACTGGATCCCACTGATGATTCGGATTGTGAGGGTAACTaGATGGTCGTCATATTCTGGTTCATTTGGGTTAAAGCCCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: NRQLDPTDDSDCEGN*MVVIFWFIWVKAQG Trigger: ACCCTGGGCTTTAACCCAAATGAACCAGAATATGACGACCATCCAGTTACCCTCACAATCCGAATCATCAGTGGGATCCAGTTGCCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR TCA 90 bp | ACCGTAGACTTCTATGATCACTACTATGTCAGGCGTGTTAGAGGATaGGCTAACAGGCAACTGGATCCCACTGATGATTCGGATTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: TVDFYDHYYVRRVRG*ANRQLDPTDDSDCE Trigger: CTCACAATCCGAATCATCAGTGGGATCCAGTTGCCTGTTAGCTCATCCTCTAACACGCCTGACATAGTAGTGATCATAGAAGTCTACGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CCA 90 bp | ACTGATGATTCGGATTGTGAGGGTAACTGGATGGTCGTCATATTCTaGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGTC | + |
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Preference number: 1 (lower is better) Translates to: TDDSDCEGNWMVVIF*FIWVKAQGCISKDV Trigger: GACATCCTTAGAGATACAACCCTGGGCTTTAACCCAAATGAACCAGAATATGACGACCATCCAGTTACCCTCACAATCCGAATCATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CCA 90 bp | AGCATTATTCTTAACAACACGAGTCTGCTGCTTCACGTGGTCGTTTaGAACACCGTAGACTTCTATGATCACTACTATGTCAGGCGTGTT | + |
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Preference number: 1 (lower is better) Translates to: SIILNNTSLLLHVVV*NTVDFYDHYYVRRV Trigger: AACACGCCTGACATAGTAGTGATCATAGAAGTCTACGGTGTTCCAAACGACCACGTGAAGCAGCAGACTCGTGTTGTTAAGAATAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR TCA 90 bp | CAGTTACATGCGTCACTCTCTGAAGTACCAAACATAAATAAACAGTaGGGAAGGTTCAAGGTTCGCACCGGATTTGGAAAACAGAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: QLHASLSEVPNINKQ*GRFKVRTGFGKQRN Trigger: GTTCCTCTGTTTTCCAAATCCGGTGCGAACCTTGAACCTTCCTCACTGTTTATTTATGTTTGGTACTTCAGAGAGTGACGCATGTAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CCA 90 bp | TTCCATTCTAGCACTTGGCCACTTTTGTCGGTTCCTATCCTCTCGTaGGTTTCAGATAAGGTTCCCACTTTCCTGTTTTTCACTAATATT | + |
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Preference number: 1 (lower is better) Translates to: FHSSTWPLLSVPILS*VSDKVPTFLFFTNI Trigger: AATATTAGTGAAAAACAGGAAAGTGGGAACCTTATCTGAAACCCACGAGAGGATAGGAACCGACAAAAGTGGCCAAGTGCTAGAATGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CCA 90 bp | TGGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGTCTaGCTTCAAAATATATCCAGAGCCTCCATTATCCAAAAATTTCCC | + |
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Preference number: 1 (lower is better) Translates to: WFIWVKAQGCISKDV*LQNISRASIIQKFP Trigger: GGGAAATTTTTGGATAATGGAGGCTCTGGATATATTTTGAAGCCAGACATCCTTAGAGATACAACCCTGGGCTTTAACCCAAATGAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR TCA 90 bp | AGACTCTCCAATCGAATTGGTCTCATTAAATTGCTGATAGACTCTTaGATATTGGAAGTTTCGGAACTTCTCAGCCTTAGTATAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: RLSNRIGLIKLLIDS*ILEVSELLSLSIND Trigger: GTCATTTATACTAAGGCTGAGAAGTTCCGAAACTTCCAATATTCAAGAGTCTATCAGCAATTTAATGAGACCAATTCGATTGGAGAGTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGGTTCGCACCGGATTTGGAAAACAGAGGAACACGACGATAACCTTTGTTCAGGCAGTCCAGGGGTTTaGAAGTTCAAGGCCACCATC | + |
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Preference number: 2 (lower is better) Translates to: QGSHRIWKTEEHDDNLCSGSPGV*KFKATI Trigger: GATGGTGGCCTTGAACTTTCAAACCCCTGGACTGCC...TGAACAAAGGTTATCGTCGTGTTCCTCTGTTTTCCAAATCCGGTGCGAACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CAA 90 bp | AGATCAGATAAGGCCATGGCTATTTTCATCTTCCTCTTCCTTTTCTaGACGCCTGCTATTCCACTCAATGTCGAGGGATCTGCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: RSDKAMAIFIFLFLF*TPAIPLNVEGSASL Trigger: GAGGGAAGCAGATCCCTCGACATTGAGTGGAATAGCAGGCGTCAAGAAAAGGAAGAGGAAGATGAAAATAGCCATGGCCTTATCTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR TCA 90 bp | TCATATTCTGGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGTCTGGCAGTCCAGGGGTTTaGAAGTTCAAGGCCACCATC | + |
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Preference number: 2 (lower is better) Translates to: SYSGSFGLKPRVVSLRMSGSPGV*KFKATI Trigger: GATGGTGGCCTTGAACTTTCAAACCCCTGGACTGCC...AGACATCCTTAGAGATACAACCCTGGGCTTTAACCCAAATGAACCAGAATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR GCA 90 bp | TCCGTGATAGGAAGACATCCCATGTTTCTGGATCCATTCCTGAGTCTTCATCACTCTCCAAAGGTGCTCTaGAGAATGCTAGCCATCACT | + |
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Preference number: 2 (lower is better) Translates to: SVIGRHPMFLDPFLSLHHSPKVL*RMLAIT Trigger: AGTGATGGCTAGCATTCTGCAGAGCACCTTTGGAGA...GTGATGAAGACTCAGGAATGGATCCAGAAACATGGGATGTCTTCCTATCACGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGAGGAAGGTTCAAGGTTCGCACCGGATTTGGAAAACAGAGGAACACGACATATTCTGGTTCATTTaGGTTAAAGCCCAGGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: TVRKVQGSHRIWKTEEHDIFWFI*VKAQGC Trigger: ACAACCCTGGGCTTTAACCCAAATGAACCAGAATAT...GTCGTGTTCCTCTGTTTTCCAAATCCGGTGCGAACCTTGAACCTTCCTCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CAA 90 bp | GTGATGAATGCCGCGGTGTGGAAAATAAACTCATGGACTCTCAATTaGGAAAGTTTTCGAGCTCGAGACTCTCCAATCGAATTGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VMNAAVWKINSWTLN*ESFRARDSPIELVS Trigger: TGAGACCAATTCGATTGGAGAGTCTCGAGCTCGAAAACTTTCCAAATTGAGAGTCCATGAGTTTATTTTCCACACCGCGGCATTCATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCGCACCGGATTTGGAAAACAGAGGAACACGACGATAACCTTTGTTCATGCCACCATCTTCATAGATaGCTTCTTTCCATTCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: GSHRIWKTEEHDDNLCSCHHLHR*LLSILA Trigger: TGCTAGAATGGAAAGAAGTCATCTATGAAGATGGTG...GCATGAACAAAGGTTATCGTCGTGTTCCTCTGTTTTCCAAATCCGGTGCGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCGCACCGGATTTGGAAAACAGAGGAACACGACGATAACCTTTGTTCATGCATGGTCGTCATATTCTaGTTCATTTGGGTTAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GSHRIWKTEEHDDNLCSCMVVIF*FIWVKA Trigger: GGCTTTAACCCAAATGAACCAGAATATGACGACCAT...GCATGAACAAAGGTTATCGTCGTGTTCCTCTGTTTTCCAAATCCGGTGCGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTGTTGAGTTTCAACAACAAAACGTATCAATGCCAGTTCTGGCACTTGAATCCTCTTCCTTTTCTTaGCGCCTGCTATTCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: SLVEFQQQNVSMPVLALESSSFS*RLLFHS Trigger: TGAGTGGAATAGCAGGCGTCAAGAAAAGGAAGAGGA...TTCAAGTGCCAGAACTGGCATTGATACGTTTTGTTGTTGAAACTCAACAAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGTGGAAAATAAACTCATGGACTCTCAATTTGGAAAGTTTTCGAGCTCGAGATCTCCAAAGGTGCTCTaGAGAATGCTAGCCATCACT | + |
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Preference number: 2 (lower is better) Translates to: GVENKLMDSQFGKFSSSRSPKVL*RMLAIT Trigger: AGTGATGGCTAGCATTCTGCAGAGCACCTTTGGAGA...TCTCGAGCTCGAAAACTTTCCAAATTGAGAGTCCATGAGTTTATTTTCCACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR GCA 90 bp | AACAACACGAGTCTGCTGCTTCACGTGGTCGTTTGGAACACCGTAGACTTCTATAAAAATTTCCCGTTTTaGAAATCCATAGGCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: NNTSLLLHVVVWNTVDFYKNFPF*KSIGSP Trigger: TGGACTGCCTATGGATTTGCAAAACGGGAAATTTTT...ATAGAAGTCTACGGTGTTCCAAACGACCACGTGAAGCAGCAGACTCGTGTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CCA 90 bp | GGACTAAAAGCATTATTCTTAACAACACGAGTCTGCTGCTTCACGTGGTCGTTTGTGAGGGTAACTGGATaGTCGTCATATTCTGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: GLKALFLTTRVCCFTWSFVRVTG*SSYSGS Trigger: TGAACCAGAATATGACGACCATCCAGTTACCCTCAC...AAACGACCACGTGAAGCAGCAGACTCGTGTTGTTAAGAATAATGCTTTTAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAAAAGCATTATTCTTAACAACACGAGTCTGCTGCTTCACGTGGTCGTTTGGGTGAGGGTAACTGGATaGTCGTCATATTCTGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: TKSIILNNTSLLLHVVVWVRVTG*SSYSGS Trigger: TGAACCAGAATATGACGACCATCCAGTTACCCTCAC...CCAAACGACCACGTGAAGCAGCAGACTCGTGTTGTTAAGAATAATGCTTTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CAA 90 bp | CACTACTGGGTAATCAGATGTCACAAAGGCATACTTGTTTATTGCTaGGACCACAGTTTTGAAGAGAAGCTTGCTGGTGAATGTGTAACC | + |
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Preference number: 2 (lower is better) Translates to: HYWVIRCHKGILVYC*DHSFEEKLAGECVT Trigger: GGTTACACATTCACCAGCAAGCTTCTCTTCAAAACTGTGGTCCAAGCAATAAACAAGTATGCCTTTGTGACATCTGATTACCCAGTAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGGAAAATAAACTCATGGACTCTCAATTTGGAAAGTTTTCGAGCTCGAGAAGAGAAGCTTGCTGGTaGATGTGTAACCATGGTACA | + |
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Preference number: 2 (lower is better) Translates to: GVENKLMDSQFGKFSSSRREACW*MCNHGT Trigger: TGTACCATGGTTACACATTCACCAGCAAGCTTCTCT...TCTCGAGCTCGAAAACTTTCCAAATTGAGAGTCCATGAGTTTATTTTCCACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGATTTTCTAAGGACAGCACTACTGGGTAATCAGATGTCACAAAGGCATACTAGAGAAGCTTGCTGGTaGATGTGTAACCATGGTACA | + |
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Preference number: 2 (lower is better) Translates to: SDFLRTALLGNQMSQRHTREACW*MCNHGT Trigger: TGTACCATGGTTACACATTCACCAGCAAGCTTCTCT...AGTATGCCTTTGTGACATCTGATTACCCAGTAGTGCTGTCCTTAGAAAATCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCGCGGTGTGGAAAATAAACTCATGGACTCTCAATTTGGAAAGTTTTCGAGCCACCATCTTCATAGATaGCTTCTTTCCATTCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: CRGVENKLMDSQFGKFSSHHLHR*LLSILA Trigger: TGCTAGAATGGAAAGAAGTCATCTATGAAGATGGTG...GCTCGAAAACTTTCCAAATTGAGAGTCCATGAGTTTATTTTCCACACCGCGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGGTTCGCACCGGATTTGGAAAACAGAGGAACACGACGATAACCTTTGTTCAGCCAGTTCTGGCACTTaGATAAGAAATGTAAATGTT | + |
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Preference number: 2 (lower is better) Translates to: QGSHRIWKTEEHDDNLCSASSGT*IRNVNV Trigger: AACATTTACATTTCTTATTCAAGTGCCAGAACTGGC...TGAACAAAGGTTATCGTCGTGTTCCTCTGTTTTCCAAATCCGGTGCGAACCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGAGGAGGAGGAGCAGGAACTCACACGATGATTCTAAAACACTGTTTTCAATCTCCATTTCATACTaGTCTTGGGTTAGAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: GERRRSRNSHDDSKTLFSISISY*SWVRNS Trigger: TGAGTTTCTAACCCAAGAGCAGTATGAAATGGAGAT...TGAAAACAGTGTTTTAGAATCATCGTGTGAGTTCCTGCTCCTCCTCCTCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149931.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGTCTGGCTTATCTCCATTTCATACTaGTCTTGGGTTAGAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: FWFIWVKAQGCISKDVWLISISY*SWVRNS Trigger: TGAGTTTCTAACCCAAGAGCAGTATGAAATGGAGAT...AAGCCAGACATCCTTAGAGATACAACCCTGGGCTTTAACCCAAATGAACCAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGTTTGAAAGTTCAAGGCCACCATCTGACATCCTACATTCCAAAACTCTTGAAAGTTAGAAGAGTCTaGTCTCATCATTTTGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: RGLKVQGHHLTSYIPKLLKVRRV*SHHFGV Trigger: TACCCCAAAATGATGAGAGCAGACTCTTCTAACTTT...CAAGAGTTTTGGAATGTAGGATGTCAGATGGTGGCCTTGAACTTTCAAACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGTCTGGCTTAAAGTTAGAAGAGTCTaGTCTCATCATTTTGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: FWFIWVKAQGCISKDVWLKVRRV*SHHFGV Trigger: TACCCCAAAATGATGAGAGCAGACTCTTCTAACTTT...AAGCCAGACATCCTTAGAGATACAACCCTGGGCTTTAACCCAAATGAACCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CCA 90 bp | TCGTCATATTCTGGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGAACCATGGTACACAATaGGTTCATTTTGGGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: SSYSGSFGLKPRVVSLRMNHGTQ*VHFGIH Trigger: ATGGATCCCAAAATGAACCCATTGTGTACCATGGTT...CATCCTTAGAGATACAACCCTGGGCTTTAACCCAAATGAACCAGAATATGACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGATCCGTGATAGGAAGACATCCCATGTTTCTGGATCCATTCCTGAGTCTTACTTGTTTATTGCTTaGACCACAGTTTTGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLIRDRKTSHVSGSIPESYLFIA*TTVLKR Trigger: TCTCTTCAAAACTGTGGTCCAAGCAATAAACAAGTA...AGACTCAGGAATGGATCCAGAAACATGGGATGTCTTCCTATCACGGATCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAAAGCATTATTCTTAACAACACGAGTCTGCTGCTTCACGTGGTCGTTTGGAGATCAGATAAGGCCATaGCTATTTTCATCTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LKALFLTTRVCCFTWSFGDQIRP*LFSSSS Trigger: AGAGGAAGATGAAAATAGCCATGGCCTTATCTGATC...TCCAAACGACCACGTGAAGCAGCAGACTCGTGTTGTTAAGAATAATGCTTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CAA 90 bp | ACAGTAGACATTCTGATGAAAACATGTATCTTGCGAAACCTTCAATaGACATCTGTCGCTCACCCTTTACTTCTTCAATGGGCTCATACT | + |
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Preference number: 2 (lower is better) Translates to: TVDILMKTCILRNLQ*TSVAHPLLLQWAHT Trigger: AGTATGAGCCCATTGAAGAAGTAAAGGGTGAGCGACAGATGTCAATTGAAGGTTTCGCAAGATACATGTTTTCATCAGAATGTCTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 ENSMUST00000149931.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTTTGAAAGTTCAAGGCCACCATCTGACATCCTACATTCCAAAACTCTTGTACTTGTTTATTGCTTaGACCACAGTTTTGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RGLKVQGHHLTSYIPKLLYLFIA*TTVLKR Trigger: TCTCTTCAAAACTGTGGTCCAAGCAATAAACAAGTA...CAAGAGTTTTGGAATGTAGGATGTCAGATGGTGGCCTTGAACTTTCAAACCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAACATGTATCTTGCGAAACCTTCAATTGACATCTGTCGCTCACCCTTTACTATCTCCATTTCATACTaGTCTTGGGTTAGAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: ENMYLAKPSIDICRSPFTISISY*SWVRNS Trigger: TGAGTTTCTAACCCAAGAGCAGTATGAAATGGAGAT...AGTAAAGGGTGAGCGACAGATGTCAATTGAAGGTTTCGCAAGATACATGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 ENSMUST00000149931.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGTTAGAAGAGTCTGCTCTCATCATTTTGGGGTATACTCTGGTGATGAATGATCAGATAAGGCCATaGCTATTTTCATCTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LKLEESALIILGYTLVMNDQIRP*LFSSSS Trigger: AGAGGAAGATGAAAATAGCCATGGCCTTATCTGATC...ATTCATCACCAGAGTATACCCCAAAATGATGAGAGCAGACTCTTCTAACTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGAGGAAGGTTCAAGGTTCGCACCGGATTTGGAAAACAGAGGAACACGACGCTTCCCTCTCCTCCTaGATCCGTGATAGGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: TVRKVQGSHRIWKTEEHDASLSS*IRDRKT Trigger: TGTCTTCCTATCACGGATCAAGGAGGAGAGGGAAGC...GTCGTGTTCCTCTGTTTTCCAAATCCGGTGCGAACCTTGAACCTTCCTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGAGGAAGGTTCAAGGTTCGCACCGGATTTGGAAAACAGAGGAACACGACGCTTGGACCACAGTTTaGAAGAGAAGCTTGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: TVRKVQGSHRIWKTEEHDAWTTV*KRSLLV Trigger: CACCAGCAAGCTTCTCTTCAAAACTGTGGTCCAAGC...GTCGTGTTCCTCTGTTTTCCAAATCCGGTGCGAACCTTGAACCTTCCTCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR TCA 72 bp | CACTCAATGTCGAGGGATCTGCTTCCCTCTCCTCCTTaGTCCGTGATAGGAAGACATCCCATGTTTCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: HSMSRDLLPSPP*SVIGRHPMFLD Trigger: ATCCAGAAACATGGGATGTCTTCCTATCACGGATCAAGGAGGAGAGGGAAGCAGATCCCTCGACATTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGAGGAAGGTTCAAGGTTCGCACCGGATTTGGAAAACAGAGGAACACGACCAAAAATTTCCCGTTTaGCAAATCCATAGGCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: TVRKVQGSHRIWKTEEHDQKFPV*QIHRQS Trigger: GGACTGCCTATGGATTTGCAAAACGGGAAATTTTTG...GTCGTGTTCCTCTGTTTTCCAAATCCGGTGCGAACCTTGAACCTTCCTCACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR TCA 72 bp | TTCTATGATCACTACTATGTCAGGCGTGTTAGAGGATaGGCTAACAGGCAACTGGATCCCACTGATGATTCG | + |
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Preference number: 3 (lower is better) Translates to: FYDHYYVRRVRG*ANRQLDPTDDS Trigger: CGAATCATCAGTGGGATCCAGTTGCCTGTTAGCTCATCCTCTAACACGCCTGACATAGTAGTGATCATAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CCA 72 bp | TCGGATTGTGAGGGTAACTGGATGGTCGTCATATTCTaGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCT | + |
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Preference number: 3 (lower is better) Translates to: SDCEGNWMVVIF*FIWVKAQGCIS Trigger: AGAGATACAACCCTGGGCTTTAACCCAAATGAACCAGAATATGACGACCATCCAGTTACCCTCACAATCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CCA 72 bp | ATCCCACTGATGATTCGGATTGTGAGGGTAACTGGATaGTCGTCATATTCTGGTTCATTTGGGTTAAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: IPLMIRIVRVTG*SSYSGSFGLKP Trigger: GGGCTTTAACCCAAATGAACCAGAATATGACGACCATCCAGTTACCCTCACAATCCGAATCATCAGTGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CCA 72 bp | CTTAACAACACGAGTCTGCTGCTTCACGTGGTCGTTTaGAACACCGTAGACTTCTATGATCACTACTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LNNTSLLLHVVV*NTVDFYDHYYV Trigger: GACATAGTAGTGATCATAGAAGTCTACGGTGTTCCAAACGACCACGTGAAGCAGCAGACTCGTGTTGTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CCA 72 bp | CTGGATCCCACTGATGATTCGGATTGTGAGGGTAACTaGATGGTCGTCATATTCTGGTTCATTTGGGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LDPTDDSDCEGN*MVVIFWFIWVK Trigger: TTTAACCCAAATGAACCAGAATATGACGACCATCCAGTTACCCTCACAATCCGAATCATCAGTGGGATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCTAAGGACAGCACTACTGGGTAATCAGATGTCACAAAGGCATACTTGTTTAGCTTGGACCACAGTTTaGAAGAGAAGCTTGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FLRTALLGNQMSQRHTCLAWTTV*KRSLLV Trigger: CACCAGCAAGCTTCTCTTCAAAACTGTGGTCCAAGC...TAAACAAGTATGCCTTTGTGACATCTGATTACCCAGTAGTGCTGTCCTTAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR TCA 72 bp | GCGTCACTCTCTGAAGTACCAAACATAAATAAACAGTaGGGAAGGTTCAAGGTTCGCACCGGATTTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASLSEVPNINKQ*GRFKVRTGFGK Trigger: TTTTCCAAATCCGGTGCGAACCTTGAACCTTCCTCACTGTTTATTTATGTTTGGTACTTCAGAGAGTGACGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CCA 72 bp | TGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGTCTaGCTTCAAAATATATCCAGAGCCTCCATTATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: WVKAQGCISKDV*LQNISRASIIQ Trigger: TTGGATAATGGAGGCTCTGGATATATTTTGAAGCCAGACATCCTTAGAGATACAACCCTGGGCTTTAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGGTTTGAAAGTTCAAGGCCACCATCTGACATCCTACATTCCAAAACTCTTGAATGGTGATTCTTCCTaGGTTCTGTCTGTCATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RGLKVQGHHLTSYIPKLLNGDSS*VLSVIF Trigger: GAAAATGACAGACAGAACCAAGGAAGAATCACCATT...CAAGAGTTTTGGAATGTAGGATGTCAGATGGTGGCCTTGAACTTTCAAACCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CAA 90 bp | TTAAAGTTAGAAGAGTCTGCTCTCATCATTTTGGGGTATACTCTGGTGATGAATCACAATGGGTTCATTTaGGGATCCATCCCAGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LKLEESALIILGYTLVMNHNGFI*GSIPAV Trigger: GACTGCTGGGATGGATCCCAAAATGAACCCATTGTG...ATTCATCACCAGAGTATACCCCAAAATGATGAGAGCAGACTCTTCTAACTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CAA 90 bp | TCGTCATATTCTGGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGCAAAAATTTCCCGTTTaGCAAATCCATAGGCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSYSGSFGLKPRVVSLRMQKFPV*QIHRQS Trigger: GGACTGCCTATGGATTTGCAAAACGGGAAATTTTTG...CATCCTTAGAGATACAACCCTGGGCTTTAACCCAAATGAACCAGAATATGACGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR TCA 72 bp | GATCCATTCCTGAGTCTTCATCACCATCTTCATAGATaGCTTCTTTCCATTCTAGCACTTGGCCACTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: DPFLSLHHHLHR*LLSILALGHFC Trigger: ACAAAAGTGGCCAAGTGCTAGAATGGAAAGAAGTCATCTATGAAGATGGTGATGAAGACTCAGGAATGGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR-3UTR CAA 90 bp | CGTGTTACTGGTTTTTCCTATTTTAAAGGTACAGTAGAGACGTGTCGCAGCCATAATGGTGATTCTTCCTaGGTTCTGTCTGTCATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RVTGFSYFKGTVETCRSHNGDSS*VLSVIF Trigger: GAAAATGACAGACAGAACCAAGGAAGAATCACCATT...ATGGCTGCGACACGTCTCTACTGTACCTTTAAAATAGGAAAAACCAGTAACACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149931.2 |
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| 3UTR-3UTR CAA 90 bp | TTGATCCGTGATAGGAAGACATCCCATGTTTCTGGATCCATTCCTGAGTCTTCAACTCGGTCCCAATATTaGATCGGATATCAAATATGT | + |
|
Preference number: 3 (lower is better) Translates to: LIRDRKTSHVSGSIPESSTRSQY*IGYQIC Trigger: ACATATTTGATATCCGATCAAATATTGGGACCGAGT...TGAAGACTCAGGAATGGATCCAGAAACATGGGATGTCTTCCTATCACGGATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGACTCTCAATTTGGAAAGTTTTCGAGCTCGAGACTCTCCAATCGAATTGATGGGCTCATACTTATaGATGATCTCTACTGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: SWTLNLESFRARDSPIELMGSYL*MISTES Trigger: TGATTCAGTAGAGATCATCAATAAGTATGAGCCCAT...CAATTCGATTGGAGAGTCTCGAGCTCGAAAACTTTCCAAATTGAGAGTCCATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGTCATATTCTGGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGACTCGGTCCCAATATTaGATCGGATATCAAATATGT | + |
|
Preference number: 3 (lower is better) Translates to: SSYSGSFGLKPRVVSLRMTRSQY*IGYQIC Trigger: ACATATTTGATATCCGATCAAATATTGGGACCGAGT...CATCCTTAGAGATACAACCCTGGGCTTTAACCCAAATGAACCAGAATATGACGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTGGAAAATAAACTCATGGACTCTCAATTTGGAAAGTTTTCGAGCTCGAGAATGGGCTCATACTTATaGATGATCTCTACTGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GVENKLMDSQFGKFSSSRMGSYL*MISTES Trigger: TGATTCAGTAGAGATCATCAATAAGTATGAGCCCAT...TCTCGAGCTCGAAAACTTTCCAAATTGAGAGTCCATGAGTTTATTTTCCACACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGTTAGAAGAGTCTGCTCTCATCATTTTGGGGTATACTCTGGTGATGAATAATGGTGATTCTTCCTaGGTTCTGTCTGTCATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LKLEESALIILGYTLVMNNGDSS*VLSVIF Trigger: GAAAATGACAGACAGAACCAAGGAAGAATCACCATT...ATTCATCACCAGAGTATACCCCAAAATGATGAGAGCAGACTCTTCTAACTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| 3UTR TCA 72 bp | TGCCCGAGTAATTCATTTCCTGATAATAAGCCTTGTTaGGTTTCAACAACAAAACGTATCAATGCCAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CPSNSFPDNKPC*VSTTKRINASS Trigger: AGAACTGGCATTGATACGTTTTGTTGTTGAAACTCAACAAGGCTTATTATCAGGAAATGAATTACTCGGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CAA 72 bp | CCACTCAATGTCGAGGGATCTGCTTCCCTCTCCTCCTaGATCCGTGATAGGAAGACATCCCATGTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLNVEGSASLSS*IRDRKTSHVSG Trigger: TCCAGAAACATGGGATGTCTTCCTATCACGGATCAAGGAGGAGAGGGAAGCAGATCCCTCGACATTGAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CAA 72 bp | GCCGCGGTGTGGAAAATAAACTCATGGACTCTCAATTaGGAAAGTTTTCGAGCTCGAGACTCTCCAATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAVWKINSWTLN*ESFRARDSPIE Trigger: TTCGATTGGAGAGTCTCGAGCTCGAAAACTTTCCAAATTGAGAGTCCATGAGTTTATTTTCCACACCGCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTGCCTCTGGAGACGGTAGTGTATCTGGAAACTCCTCAAGCATGTCCGAAATCATCCTGAACCTTTaGCAAAAACCATCTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSASGDGSVSGNSSSMSEIILNL*QKPSCF Trigger: GAAGCAAGATGGTTTTTGTCAAAGGTTCAGGATGAT...TTCGGACATGCTTGAGGAGTTTCCAGATACACTACCGTCTCCAGAGGCACTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| CDS-3UTR TCA 90 bp | GGTTCGCACCGGATTTGGAAAACAGAGGAACACGACGATAACCTTTGTTCATGCCCTCTAAAATCATCCTaGACCTTTGACAAAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSHRIWKTEEHDDNLCSCPLKSS*TFDKNH Trigger: ATGGTTTTTGTCAAAGGTTCAGGATGATTTTAGAGG...GCATGAACAAAGGTTATCGTCGTGTTCCTCTGTTTTCCAAATCCGGTGCGAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| CDS-3UTR CCA 90 bp | TCCGTGATAGGAAGACATCCCATGTTTCTGGATCCATTCCTGAGTCTTCATCACATGAGCAAAGTGGCATaGGAAATCAAGTTTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVIGRHPMFLDPFLSLHHMSKVA*EIKFLK Trigger: CTTGAGAAACTTGATTTCCCATGCCACTTTGCTCAT...GTGATGAAGACTCAGGAATGGATCCAGAAACATGGGATGTCTTCCTATCACGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| CDS-3UTR TCA 90 bp | TCCTTGATCCGTGATAGGAAGACATCCCATGTTTCTGGATCCATTCCTGAGTCTCCTCTAAAATCATCCTaGACCTTTGACAAAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLIRDRKTSHVSGSIPESPLKSS*TFDKNH Trigger: ATGGTTTTTGTCAAAGGTTCAGGATGATTTTAGAGG...AGACTCAGGAATGGATCCAGAAACATGGGATGTCTTCCTATCACGGATCAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| CDS-3UTR TCA 90 bp | AGATTCGTCATCCACAGGTGTCTTACATATCCCCAAATGTCACTCGGTCCCAATAAAATATGTTTCACATaGGCAAAGTGGCATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFVIHRCLTYPQMSLGPNKICFT*AKWHGK Trigger: TTTCCCATGCCACTTTGCTCATGTGAAACATATTTT...ATTGGGACCGAGTGACATTTGGGGATATGTAAGACACCTGTGGATGACGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149931.2 |
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| CDS-3UTR CCA 90 bp | CGTGTTACTGGTTTTTCCTATTTTAAAGGTACAGTAGAGACGTGTCGCAGCCATATGAGCAAAGTGGCATaGGAAATCAAGTTTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVTGFSYFKGTVETCRSHMSKVA*EIKFLK Trigger: CTTGAGAAACTTGATTTCCCATGCCACTTTGCTCAT...ATGGCTGCGACACGTCTCTACTGTACCTTTAAAATAGGAAAAACCAGTAACACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149931.2 |
||
| CDS-3UTR TCA 90 bp | TCGTCATATTCTGGTTCATTTGGGTTAAAGCCCAGGGTTGTATCTCTAAGGATGAAAATATGTTTCACATaGGCAAAGTGGCATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSYSGSFGLKPRVVSLRMKICFT*AKWHGK Trigger: TTTCCCATGCCACTTTGCTCATGTGAAACATATTTT...CATCCTTAGAGATACAACCCTGGGCTTTAACCCAAATGAACCAGAATATGACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| 3UTR CAA 72 bp | GTAATCAGATGTCACAAAGGCATACTTGTTTATTGCTaGGACCACAGTTTTGAAGAGAAGCTTGCTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIRCHKGILVYC*DHSFEEKLAGE Trigger: TTCACCAGCAAGCTTCTCTTCAAAACTGTGGTCCAAGCAATAAACAAGTATGCCTTTGTGACATCTGATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| CDS-3UTR TCA 90 bp | ATAAGCCTTGTTGAGTTTCAACAACAAAACGTATCAATGCCAGTTCTGGCACTTATCATCCTGAACCTTTaGCAAAAACCATCTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLVEFQQQNVSMPVLALIILNL*QKPSCF Trigger: GAAGCAAGATGGTTTTTGTCAAAGGTTCAGGATGAT...AAGTGCCAGAACTGGCATTGATACGTTTTGTTGTTGAAACTCAACAAGGCTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| CDS-3UTR TCA 90 bp | ATTCTGATGAAAACATGTATCTTGCGAAACCTTCAATTGACATCTGTCGCTCACATCATCCTGAACCTTTaGCAAAAACCATCTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILMKTCILRNLQLTSVAHIILNL*QKPSCF Trigger: GAAGCAAGATGGTTTTTGTCAAAGGTTCAGGATGAT...GTGAGCGACAGATGTCAATTGAAGGTTTCGCAAGATACATGTTTTCATCAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 ENSMUST00000149931.2 |
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| CDS-3UTR TCA 90 bp | GATTTTCTAAGGACAGCACTACTGGGTAATCAGATGTCACAAAGGCATACTTGTAAAATATGTTTCACATaGGCAAAGTGGCATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DFLRTALLGNQMSQRHTCKICFT*AKWHGK Trigger: TTTCCCATGCCACTTTGCTCATGTGAAACATATTTT...ACAAGTATGCCTTTGTGACATCTGATTACCCAGTAGTGCTGTCCTTAGAAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
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| CDS-3UTR CCA 90 bp | TTTCTAAGGACAGCACTACTGGGTAATCAGATGTCACAAAGGCATACTTGTTTAATGAGCAAAGTGGCATaGGAAATCAAGTTTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLRTALLGNQMSQRHTCLMSKVA*EIKFLK Trigger: CTTGAGAAACTTGATTTCCCATGCCACTTTGCTCAT...TAAACAAGTATGCCTTTGTGACATCTGATTACCCAGTAGTGCTGTCCTTAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| CDS-3UTR CAA 90 bp | AGATTCGTCATCCACAGGTGTCTTACATATCCCCAAATGTCACTCGGTCCCAATTTGACAAAAACCATCTaGCTTCTGCGAGCTCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: RFVIHRCLTYPQMSLGPNLTKTI*LLRAHE Trigger: TTCATGAGCTCGCAGAAGCAAGATGGTTTTTGTCAA...ATTGGGACCGAGTGACATTTGGGGATATGTAAGACACCTGTGGATGACGAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149931.2 |
||
| CDS-3UTR CAA 90 bp | TGCCGCGGTGTGGAAAATAAACTCATGGACTCTCAATTTGGAAAGTTTTCGAGCTTGACAAAAACCATCTaGCTTCTGCGAGCTCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: CRGVENKLMDSQFGKFSSLTKTI*LLRAHE Trigger: TTCATGAGCTCGCAGAAGCAAGATGGTTTTTGTCAA...GCTCGAAAACTTTCCAAATTGAGAGTCCATGAGTTTATTTTCCACACCGCGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| CDS-3UTR CAA 90 bp | TCCGTGATAGGAAGACATCCCATGTTTCTGGATCCATTCCTGAGTCTTCATCACAATCATCCTGAACCTTaGACAAAAACCATCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVIGRHPMFLDPFLSLHHNHPEP*TKTILL Trigger: AAGCAAGATGGTTTTTGTCAAAGGTTCAGGATGATT...GTGATGAAGACTCAGGAATGGATCCAGAAACATGGGATGTCTTCCTATCACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAAAATAAACTCATGGACTCTCAATTTGGAAAGTTTTCGAGCTCGAGACTCTTGACAAAAACCATCTaGCTTCTGCGAGCTCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: VENKLMDSQFGKFSSSRLLTKTI*LLRAHE Trigger: TTCATGAGCTCGCAGAAGCAAGATGGTTTTTGTCAA...GAGTCTCGAGCTCGAAAACTTTCCAAATTGAGAGTCCATGAGTTTATTTTCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATTTTCTAAGGACAGCACTACTGGGTAATCAGATGTCACAAAGGCATACTAATCATCCTGAACCTTaGACAAAAACCATCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SDFLRTALLGNQMSQRHTNHPEP*TKTILL Trigger: AAGCAAGATGGTTTTTGTCAAAGGTTCAGGATGATT...AGTATGCCTTTGTGACATCTGATTACCCAGTAGTGCTGTCCTTAGAAAATCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000137148.8 |
||
| CDS CCA 90 bp | GGTGGGATCACACTTAAAAATATGTTTCACATGAGCAAAGTGGCATaGGAAATCAAGTTTCTCAAGCAGTTTGTGAGTAATTTCAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGITLKNMFHMSKVA*EIKFLKQFVSNFNV Trigger: AACGTTGAAATTACTCACAAACTGCTTGAGAAACTTGATTTCCCATGCCACTTTGCTCATGTGAAACATATTTTTAAGTGTGATCCCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137148.8 |
||
| CDS CCA 72 bp | TTCCTTAAAAATATGTTTCACATGAGCAAAGTGGCATaGGAAATCAAGTTTCTCAAGCAGTTTGTGAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: FLKNMFHMSKVA*EIKFLKQFVSN Trigger: ATTACTCACAAACTGCTTGAGAAACTTGATTTCCCATGCCACTTTGCTCATGTGAAACATATTTTTAAGGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032356.13 |
||
| CDS CCA 72 bp | ACACTTAAAAATATGTTTCACATGAGCAAAGTGGCATaGGAAATCAAGTTTCTCAAGCAGTTTGTGAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: TLKNMFHMSKVA*EIKFLKQFVSN Trigger: ATTACTCACAAACTGCTTGAGAAACTTGATTTCCCATGCCACTTTGCTCATGTGAAACATATTTTTAAGTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137148.8 |
||
| CDS CCA 72 bp | CTACTTAAAAATATGTTTCACATGAGCAAAGTGGCATaGGAAATCAAGTTTCTCAAGCAGTTTGTGAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLKNMFHMSKVA*EIKFLKQFVSN Trigger: ATTACTCACAAACTGCTTGAGAAACTTGATTTCCCATGCCACTTTGCTCATGTGAAACATATTTTTAAGTAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129986.8 ENSMUST00000149931.2 |
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