Pregenerated sensors for PLCXD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049148Ensembl transcript IDs: ENSMUST00000061925.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TACGACCAAGAATTAGCTATGATTGCCCAATTGCAGATGACTATGGAATATTTTCCTTCAGAGACTCAGTaGAACAGGAAAATCAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: YDQELAMIAQLQMTMEYFPSETQ*NRKIRG Trigger: CCCTCTGATTTTCCTGTTCCACTGAGTCTCTGAAGG...AAAATATTCCATAGTCATCTGCAATTGGGCAATCATAGCTAATTCTTGGTCGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| 3UTR-3UTR CCA 90 bp | CAAACACATTTCGGCACAACAATGAAATACACATTATGTCGGGCATTCAATTGTTCTCTATCTTCCTCATaGACACCCAGAAGAGTAATA | + |
|
Preference number: 2 (lower is better) Translates to: QTHFGTTMKYTLCRAFNCSLSSS*TPRRVI Trigger: TATTACTCTTCTGGGTGTCCATGAGGAAGATAGAGA...ACAATTGAATGCCCGACATAATGTGTATTTCATTGTTGTGCCGAAATGTGTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| 3UTR-3UTR TCA 90 bp | GAATTAGCTATGATTGCCCAATTGCAGATGACTATGGAATATTTTTACCAAGTCTCTAGTAAACACTCATaGGTTACACTGCACAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: ELAMIAQLQMTMEYFYQVSSKHS*VTLHKH Trigger: ATGTTTGTGCAGTGTAACTCATGAGTGTTTACTAGA...GACTTGGTAAAAATATTCCATAGTCATCTGCAATTGGGCAATCATAGCTAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAACACATTTCGGCACAACAATGAAATACACATTATGTCGGGCATTCAATTGTTACAGGGGCCTGAGGTaGAAATCAGAAAATGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: QTHFGTTMKYTLCRAFNCYRGLR*KSENAI Trigger: GATTGCATTTTCTGATTTCAACCTCAGGCCCCTGTA...ACAATTGAATGCCCGACATAATGTGTATTTCATTGTTGTGCCGAAATGTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| 3UTR TCA 72 bp | AAATCAGAGGGCTTATTGATAATATGTCTAATACAATaGGGCTTCTCTATCTTCCTCATGGACACCCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KSEGLLIICLIQ*GFSIFLMDTQK Trigger: CTTCTGGGTGTCCATGAGGAAGATAGAGAAGCCTCATTGTATTAGACATATTATCAATAAGCCCTCTGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| 3UTR TCA 72 bp | CATATTTATAGCAATGCAGAATATGGTTACAATCACTaGAGACATGGTTTACCCTCATTTCCCACCCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: HIYSNAEYGYNH*RHGLPSFPTHF Trigger: GAAGTGGGTGGGAAATGAGGGTAAACCATGTCTTCAGTGATTGTAACCATATTCTGCATTGCTATAAATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAGACATGGTTTACCCTCATTTCCCACCCACTTCTAAGCCCCAGTTCCTTCCGTGTTTGCCCAGGGTaGTGGCATCATCTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKTWFTLISHPLLSPSSFRVCPG*WHHLSR Trigger: CCTGGACAGATGATGCCAGCACCCTGGGCAAACACG...GAAGGAACTGGGGCTTAGAAGTGGGTGGGAAATGAGGGTAAACCATGTCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR TCA 90 bp | CTGAAGACATGGTTTACCCTCATTTCCCACCCACTTCTAAGCCCCAGTTCCTTCCACTTGCCACACCCTTaGCCACAGTGCTTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKTWFTLISHPLLSPSSFHLPHP*PQCLLW Trigger: CCAAAGCAAGCACTGTGGTCAAGGGTGTGGCAAGTG...GAAGGAACTGGGGCTTAGAAGTGGGTGGGAAATGAGGGTAAACCATGTCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAGACATGGTTTACCCTCATTTCCCACCCACTTCTAAGCCCCAGTTCCTTCGTGAGGGGGATGCTGTaGATGCTCTCAGGCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKTWFTLISHPLLSPSSFVRGML*MLSGRV Trigger: AACTCTGCCTGAGAGCATCCACAGCATCCCCCTCAC...GAAGGAACTGGGGCTTAGAAGTGGGTGGGAAATGAGGGTAAACCATGTCTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTTTGCATGAAAGCCATAGCTGCCTCGCACACAGCCGCTGTGAAATGCTGTGGATCCACTGCATCATaGCGGGAAGAGCTCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFCMKAIAASHTAAVKCCGSTAS*REELSL Trigger: CAGAGAGAGCTCTTCCCGCCATGATGCAGTGGATCC...ACAGCATTTCACAGCGGCTGTGTGCGAGGCAGCTATGGCTTTCATGCAAAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTTTGCATGAAAGCCATAGCTGCCTCGCACACAGCCGCTGTGAAATGCTGTCTGGGTCTCTGGGCTTaGTGGAAATTCGAAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFCMKAIAASHTAAVKCCLGLWA*WKFEGR Trigger: TCGACCTTCGAATTTCCACCAAGCCCAGAGACCCAG...ACAGCATTTCACAGCGGCTGTGTGCGAGGCAGCTATGGCTTTCATGCAAAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAGACATGGTTTACCCTCATTTCCCACCCACTTCTAAGCCCCAGTTCCTTCCACTTCCAGTGCCACTaGACTGTGGTAGAAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTWFTLISHPLLSPSSFHFQCH*TVVEDQ Trigger: CTGGTCTTCTACCACAGTCCAGTGGCACTGGAAGTG...GAAGGAACTGGGGCTTAGAAGTGGGTGGGAAATGAGGGTAAACCATGTCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTTTGCATGAAAGCCATAGCTGCCTCGCACACAGCCGCTGTGAAATGCTGTCTCTCTCCTGGCTTTTaGGTACGGATCCACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SFCMKAIAASHTAAVKCCLSPGF*VRIHCI Trigger: GATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAG...ACAGCATTTCACAGCGGCTGTGTGCGAGGCAGCTATGGCTTTCATGCAAAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR TCA 90 bp | TCTAAGCCCCAGTTCCTTCAGAGACTCAGTGGAACAGGAAAATCAGAGGGCTTAGTGAAGCTCATCGTCTaGGTGGCTAACCATTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SKPQFLQRLSGTGKSEGLVKLIV*VANHFR Trigger: GCGGAAATGGTTAGCCACTCAGACGATGAGCTTCAC...TAAGCCCTCTGATTTTCCTGTTCCACTGAGTCTCTGAAGGAACTGGGGCTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAGACATGGTTTACCCTCATTTCCCACCCACTTCTAAGCCCCAGTTCCTTCGGTCTCTGGGCTTGGTaGAAATTCGAAGGTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTWFTLISHPLLSPSSFGLWAW*KFEGRS Trigger: ACTTCGACCTTCGAATTTCCACCAAGCCCAGAGACC...GAAGGAACTGGGGCTTAGAAGTGGGTGGGAAATGAGGGTAAACCATGTCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAGACATGGTTTACCCTCATTTCCCACCCACTTCTAAGCCCCAGTTCCTTCCATTGTCTGGGTCTCTaGGCTTGGTGGAAATTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKTWFTLISHPLLSPSSFHCLGL*AWWKFE Trigger: TTCGAATTTCCACCAAGCCCAGAGACCCAGACAATG...GAAGGAACTGGGGCTTAGAAGTGGGTGGGAAATGAGGGTAAACCATGTCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | TCTAAGCCCCAGTTCCTTCAGAGACTCAGTGGAACAGGAAAATCAGAGGGCTTAAGCTCATCGTCTGAGTaGCTAACCATTTCCGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SKPQFLQRLSGTGKSEGLSSSSE*LTISAS Trigger: TGATGCGGAAATGGTTAGCCACTCAGACGATGAGCT...TAAGCCCTCTGATTTTCCTGTTCCACTGAGTCTCTGAAGGAACTGGGGCTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR TCA 90 bp | TCTAAGCCCCAGTTCCTTCAGAGACTCAGTGGAACAGGAAAATCAGAGGGCTTATCGGTGATGGATGCCTaGAGAAACTGGATCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKPQFLQRLSGTGKSEGLSVMDA*RNWINF Trigger: GAAATTGATCCAGTTTCTTCAGGCATCCATCACCGA...TAAGCCCTCTGATTTTCCTGTTCCACTGAGTCTCTGAAGGAACTGGGGCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAGCAAGAGAGAGGGAGTGGAAAGGGTAGAGACTATGAATAATACAGGGTCTTTCTTCTCTCGGTaGTGGATGCCTGAAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RASKREGVERVETMNNTGSFFSR*WMPEET Trigger: AGTTTCTTCAGGCATCCATCACCGAGAGAAGAAAGA...CCCTGTATTATTCATAGTCTCTACCCTTTCCACTCCCTCTCTCTTGCTTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR GCA 90 bp | GTTGAAATCAGAAAATGCAATCTAGTAAACACTCATGAGTTACACTGCACAAACGGGGGATGCTGTGGATaGTCTCAGGCAGAGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VEIRKCNLVNTHELHCTNGGCCG*SQAELP Trigger: TGGCAACTCTGCCTGAGAGCATCCACAGCATCCCCC...GTTTGTGCAGTGTAACTCATGAGTGTTTACTAGATTGCATTTTCTGATTTCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR GCA 90 bp | CAAACACATTTCGGCACAACAATGAAATACACATTATGTCGGGCATTCAATTGTGCTCTCAGGCAGAGTTaGCATCCAGTCGGCGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: QTHFGTTMKYTLCRAFNCALRQS*HPVGEF Trigger: AAATTCGCCGACTGGATGGCAACTCTGCCTGAGAGC...ACAATTGAATGCCCGACATAATGTGTATTTCATTGTTGTGCCGAAATGTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR GCA 90 bp | TACGACCAAGAATTAGCTATGATTGCCCAATTGCAGATGACTATGGAATATTTTTGGGTCTGTCGTGTTTaGCCAGGGTGCTGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: YDQELAMIAQLQMTMEYFWVCRV*PGCWHH Trigger: ATGATGCCAGCACCCTGGGCAAACACGACAGACCCA...AAAATATTCCATAGTCATCTGCAATTGGGCAATCATAGCTAATTCTTGGTCGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR GCA 90 bp | CAAACACATTTCGGCACAACAATGAAATACACATTATGTCGGGCATTCAATTGTCTTGACCACAGTGCTTaGTTTGGGTGTCAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTHFGTTMKYTLCRAFNCLDHSA*FGCQHH Trigger: GTGGTGCTGACACCCAAAGCAAGCACTGTGGTCAAG...ACAATTGAATGCCCGACATAATGTGTATTTCATTGTTGTGCCGAAATGTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | GTTGAAATCAGAAAATGCAATCTAGTAAACACTCATGAGTTACACTGCACAAACCCACAGTGCTTGCTTTaGGTGTCAGCACCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VEIRKCNLVNTHELHCTNPQCLL*VSAPPE Trigger: CTCAGGTGGTGCTGACACCCAAAGCAAGCACTGTGG...GTTTGTGCAGTGTAACTCATGAGTGTTTACTAGATTGCATTTTCTGATTTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR GCA 90 bp | GTTGAAATCAGAAAATGCAATCTAGTAAACACTCATGAGTTACACTGCACAAACGAAGGGCACTTCCAGTaGCACTGGACTGTGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VEIRKCNLVNTHELHCTNEGHFQ*HWTVVE Trigger: TTCTACCACAGTCCAGTGGCACTGGAAGTGCCCTTC...GTTTGTGCAGTGTAACTCATGAGTGTTTACTAGATTGCATTTTCTGATTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR GCA 90 bp | GTTGAAATCAGAAAATGCAATCTAGTAAACACTCATGAGTTACACTGCACAAACTTCTCTGAGTCCACTTaGCACACCCTTGACCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VEIRKCNLVNTHELHCTNFSEST*HTLDHS Trigger: ACTGTGGTCAAGGGTGTGGCAAGTGGACTCAGAGAA...GTTTGTGCAGTGTAACTCATGAGTGTTTACTAGATTGCATTTTCTGATTTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | TACGACCAAGAATTAGCTATGATTGCCCAATTGCAGATGACTATGGAATATTTTCTGCTCCGGGCCTACTaGAGAAGCTTCATCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: YDQELAMIAQLQMTMEYFLLRAY*RSFINV Trigger: TACATTGATGAAGCTTCTCCAGTAGGCCCGGAGCAG...AAAATATTCCATAGTCATCTGCAATTGGGCAATCATAGCTAATTCTTGGTCGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | CAAACACATTTCGGCACAACAATGAAATACACATTATGTCGGGCATTCAATTGTATACAGTTCATTGTCTaGGTCTCTGGGCTTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTHFGTTMKYTLCRAFNCIQFIV*VSGLGG Trigger: TCCACCAAGCCCAGAGACCCAGACAATGAACTGTAT...ACAATTGAATGCCCGACATAATGTGTATTTCATTGTTGTGCCGAAATGTGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | GTTGAAATCAGAAAATGCAATCTAGTAAACACTCATGAGTTACACTGCACAAACAAGCTGAAGGAATCATaGGACCCTGGGATGGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VEIRKCNLVNTHELHCTNKLKES*DPGMAK Trigger: TTTAGCCATCCCAGGGTCCCATGATTCCTTCAGCTT...GTTTGTGCAGTGTAACTCATGAGTGTTTACTAGATTGCATTTTCTGATTTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR TCA 90 bp | TACGACCAAGAATTAGCTATGATTGCCCAATTGCAGATGACTATGGAATATTTTACAGAGACAAAGTTTTaGACTGTTTCTGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YDQELAMIAQLQMTMEYFTETKF*TVSGCS Trigger: GGAGCAGCCAGAAACAGTTCAAAACTTTGTCTCTGT...AAAATATTCCATAGTCATCTGCAATTGGGCAATCATAGCTAATTCTTGGTCGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR GCA 90 bp | GAATTAGCTATGATTGCCCAATTGCAGATGACTATGGAATATTTTTACCAAGTCTCTCTCGGTGATGGATaGCTGAAGAAACTGGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ELAMIAQLQMTMEYFYQVSLGDG*LKKLDQ Trigger: TTGATCCAGTTTCTTCAGGCATCCATCACCGAGAGA...GACTTGGTAAAAATATTCCATAGTCATCTGCAATTGGGCAATCATAGCTAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | GTTGAAATCAGAAAATGCAATCTAGTAAACACTCATGAGTTACACTGCACAAACCTGGGCAAAAATGGCTaGGCACATCTTGTTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: VEIRKCNLVNTHELHCTNLGKNG*AHLVSI Trigger: TATGGAAACAAGATGTGCCCAGCCATTTTTGCCCAG...GTTTGTGCAGTGTAACTCATGAGTGTTTACTAGATTGCATTTTCTGATTTCAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | GTTGAAATCAGAAAATGCAATCTAGTAAACACTCATGAGTTACACTGCACAAACACTACCTCTTTGTGGTaGTCTGTGAGAAATGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VEIRKCNLVNTHELHCTNTTSLW*SVRNAL Trigger: CAATGCATTTCTCACAGACCACCACAAAGAGGTAGT...GTTTGTGCAGTGTAACTCATGAGTGTTTACTAGATTGCATTTTCTGATTTCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CCA 90 bp | TACGACCAAGAATTAGCTATGATTGCCCAATTGCAGATGACTATGGAATATTTTAATACTACCTCTTTGTaGTGGTCTGTGAGAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YDQELAMIAQLQMTMEYFNTTSL*WSVRNA Trigger: TGCATTTCTCACAGACCACCACAAAGAGGTAGTATT...AAAATATTCCATAGTCATCTGCAATTGGGCAATCATAGCTAATTCTTGGTCGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS GCA 90 bp | GGGTGCTGGCATCATCTGTCCAGGCCAGAGGAAGGGCACTTCCAGTaGCACTGGACTGTGGTAGAAGACCAGTACTTGATAGTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCWHHLSRPEEGHFQ*HWTVVEDQYLIVLL Trigger: GAGAAGGACTATCAAGTACTGGTCTTCTACCACAGTCCAGTGGCACTGGAAGTGCCCTTCCTCTGGCCTGGACAGATGATGCCAGCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS GCA 90 bp | GGATGCCTGAAGAAACTGGATCAATTTCTCTGGGTCTGTCGTGTTTaGCCAGGGTGCTGGCATCATCTGTCCAGGCCAGAGGAAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GCLKKLDQFLWVCRV*PGCWHHLSRPEEGH Trigger: GTGCCCTTCCTCTGGCCTGGACAGATGATGCCAGCACCCTGGGCAAACACGACAGACCCAGAGAAATTGATCCAGTTTCTTCAGGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 90 bp | GAATCATGGGACCCTGGGATGGCTAAATTGGTGAGGGGGATGCTGTaGATGCTCTCAGGCAGAGTTGCCATCCAGTCGGCGAATTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESWDPGMAKLVRGML*MLSGRVAIQSANFS Trigger: GCTGAAATTCGCCGACTGGATGGCAACTCTGCCTGAGAGCATCCACAGCATCCCCCTCACCAATTTAGCCATCCCAGGGTCCCATGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS GCA 90 bp | CATGGCGGGAAGAGCTCTCTCTGTGATTGTTTCTCTGAGTCCACTTaGCACACCCTTGACCACAGTGCTTGCTTTGGGTGTCAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HGGKSSLCDCFSEST*HTLDHSACFGCQHH Trigger: GTGGTGCTGACACCCAAAGCAAGCACTGTGGTCAAGGGTGTGGCAAGTGGACTCAGAGAAACAATCACAGAGAGAGCTCTTCCCGCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | TCTAAGCCCCAGTTCCTTCAGAGACTCAGTGGAACAGGAAAATCAGAGGGCTTACTGGGTCTGTCGTGTTaGCCCAGGGTGCTGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SKPQFLQRLSGTGKSEGLLGLSC*PRVLAS Trigger: TGATGCCAGCACCCTGGGCAAACACGACAGACCCAG...TAAGCCCTCTGATTTTCCTGTTCCACTGAGTCTCTGAAGGAACTGGGGCTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 90 bp | ACAAAATCGGCAGTGACAATATTGATGCCGCTCTCTCCTGGCTTTTaGGTACGGATCCACTGCATCATGGCGGGAAGAGCTCTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TKSAVTILMPLSPGF*VRIHCIMAGRALSV Trigger: CACAGAGAGAGCTCTTCCCGCCATGATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGCGGCATCAATATTGTCACTGCCGATTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTGCATGAAAGCCATAGCTGCCTCGCACACAGCCGCTGTGAAATGCTGTCCACTTGCCACACCCTaGACCACAGTGCTTGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFCMKAIAASHTAAVKCCPLATP*TTVLAL Trigger: CAAAGCAAGCACTGTGGTCAAGGGTGTGGCAAGTGG...ACAGCATTTCACAGCGGCTGTGTGCGAGGCAGCTATGGCTTTCATGCAAAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 90 bp | AGCCGTGAGCAAAATACAGTTCATTGTCTGGGTCTCTGGGCTTGGTaGAAATTCGAAGGTCGAAGTAACGGATTCCAGCTCCCAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SREQNTVHCLGLWAW*KFEGRSNGFQLPAD Trigger: GTCAGCTGGGAGCTGGAATCCGTTACTTCGACCTTCGAATTTCCACCAAGCCCAGAGACCCAGACAATGAACTGTATTTTGCTCACGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | TCTAAGCCCCAGTTCCTTCAGAGACTCAGTGGAACAGGAAAATCAGAGGGCTTAGCTCTCTCCTGGCTTTaGGGTACGGATCCACTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SKPQFLQRLSGTGKSEGLALSWL*GTDPLH Trigger: ATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGC...TAAGCCCTCTGATTTTCCTGTTCCACTGAGTCTCTGAAGGAACTGGGGCTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | TCTAAGCCCCAGTTCCTTCAGAGACTCAGTGGAACAGGAAAATCAGAGGGCTTATCGGCAGTGACAATATaGATGCCGCTCTCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKPQFLQRLSGTGKSEGLSAVTI*MPLSPG Trigger: GCCAGGAGAGAGCGGCATCAATATTGTCACTGCCGA...TAAGCCCTCTGATTTTCCTGTTCCACTGAGTCTCTGAAGGAACTGGGGCTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS GCA 90 bp | ACAATATTGATGCCGCTCTCTCCTGGCTTTTGGGTACGGATCCACTaGATCATGGCGGGAAGAGCTCTCTCTGTGATTGTTTCTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TILMPLSPGFWVRIH*IMAGRALSVIVSLS Trigger: ACTCAGAGAAACAATCACAGAGAGAGCTCTTCCCGCCATGATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGCGGCATCAATATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 90 bp | AAGTTCTACAAAATCGGCAGTGACAATATTGATGCCGCTCTCTCCTaGCTTTTGGGTACGGATCCACTGCATCATGGCGGGAAGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KFYKIGSDNIDAALS*LLGTDPLHHGGKSS Trigger: AGAGCTCTTCCCGCCATGATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGCGGCATCAATATTGTCACTGCCGATTTTGTAGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS TCA 90 bp | CGCATCAACTTCTTGGCTACAGTTCCGAACACAGAGACAAAGTTTTaGACTGTTTCTGGCTGCTCCGGGCCTACTGGAGAAGCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RINFLATVPNTETKF*TVSGCSGPTGEASS Trigger: TGATGAAGCTTCTCCAGTAGGCCCGGAGCAGCCAGAAACAGTTCAAAACTTTGTCTCTGTGTTCGGAACTGTAGCCAAGAAGTTGATGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS TCA 90 bp | AAATTCGAAGGTCGAAGTAACGGATTCCAGCTCCCAGCTGACCAGTaGAGCTCATCGTCTGAGTGGCTAACCATTTCCGCATCAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KFEGRSNGFQLPADQ*SSSSEWLTISASTS Trigger: AGAAGTTGATGCGGAAATGGTTAGCCACTCAGACGATGAGCTTCACTGGTCAGCTGGGAGCTGGAATCCGTTACTTCGACCTTCGAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 90 bp | CACAGAGACAAAGTTTTGAACTGTTTCTGGCTGCTCCGGGCCTACTaGAGAAGCTTCATCAATGTAGAAGCTGAAGGAATCATGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: HRDKVLNCFWLLRAY*RSFINVEAEGIMGP Trigger: GGGTCCCATGATTCCTTCAGCTTCTACATTGATGAAGCTTCTCCAGTAGGCCCGGAGCAGCCAGAAACAGTTCAAAACTTTGTCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | CTGAAGACATGGTTTACCCTCATTTCCCACCCACTTCTAAGCCCCAGTTCCTTCGCAAAATACAGTTCATaGTCTGGGTCTCTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKTWFTLISHPLLSPSSFAKYSS*SGSLGL Trigger: CAAGCCCAGAGACCCAGACAATGAACTGTATTTTGC...GAAGGAACTGGGGCTTAGAAGTGGGTGGGAAATGAGGGTAAACCATGTCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS TCA 90 bp | TTGATCTCTTCGAGACCCTCGTTGACTTTGGCACTGAATAAGCCGTaGGCAAAATACAGTTCATTGTCTGGGTCTCTGGGCTTGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LISSRPSLTLALNKP*AKYSSLSGSLGLVE Trigger: TTCCACCAAGCCCAGAGACCCAGACAATGAACTGTATTTTGCTCACGGCTTATTCAGTGCCAAAGTCAACGAGGGTCTCGAAGAGATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 90 bp | CTTGGCTACAGTTCCGAACACAGAGACAAAGTTTTGAACTGTTTCTaGCTGCTCCGGGCCTACTGGAGAAGCTTCATCAATGTAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGYSSEHRDKVLNCF*LLRAYWRSFINVEA Trigger: AGCTTCTACATTGATGAAGCTTCTCCAGTAGGCCCGGAGCAGCCAGAAACAGTTCAAAACTTTGTCTCTGTGTTCGGAACTGTAGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTGCATGAAAGCCATAGCTGCCTCGCACACAGCCGCTGTGAAATGCTGTGATGTCTTTCAGCATTaGGACCAGTTTTTCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFCMKAIAASHTAAVKCCDVFQH*DQFFMV Trigger: CACCATGAAAAACTGGTCCAAATGCTGAAAGACATC...ACAGCATTTCACAGCGGCTGTGTGCGAGGCAGCTATGGCTTTCATGCAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 90 bp | AGTCCTTCTCCCATAGGTACTTTAGACTCACTTCCTGGGCAAAAATaGCTGGGCACATCTTGTTTCCATAGATGTCTTTCAGCATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPSPIGTLDSLPGQK*LGTSCFHRCLSAFG Trigger: TCCAAATGCTGAAAGACATCTATGGAAACAAGATGTGCCCAGCCATTTTTGCCCAGGAAGTGAGTCTAAAGTACCTATGGGAGAAGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | CAAACACATTTCGGCACAACAATGAAATACACATTATGTCGGGCATTCAATTGTTGCTCTCAGGCAGAGTaGCCATCCAGTCGGCGAATT | + |
|
Preference number: 5 (lower is better) Translates to: QTHFGTTMKYTLCRAFNCCSQAE*PSSRRI Trigger: AATTCGCCGACTGGATGGCAACTCTGCCTGAGAGCA...ACAATTGAATGCCCGACATAATGTGTATTTCATTGTTGTGCCGAAATGTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | GAATTAGCTATGATTGCCCAATTGCAGATGACTATGGAATATTTTTACCAAGTCCCTGGGATGGCTAAATaGGTGAGGGGGATGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELAMIAQLQMTMEYFYQVPGMAK*VRGMLW Trigger: CCACAGCATCCCCCTCACCAATTTAGCCATCCCAGG...GACTTGGTAAAAATATTCCATAGTCATCTGCAATTGGGCAATCATAGCTAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | GTTGAAATCAGAAAATGCAATCTAGTAAACACTCATGAGTTACACTGCACAAACTCTGGGTCTCTGGGCTaGGTGGAAATTCGAAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VEIRKCNLVNTHELHCTNSGSLG*VEIRRS Trigger: CGACCTTCGAATTTCCACCAAGCCCAGAGACCCAGA...GTTTGTGCAGTGTAACTCATGAGTGTTTACTAGATTGCATTTTCTGATTTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS-3UTR CAA 90 bp | GAATTAGCTATGATTGCCCAATTGCAGATGACTATGGAATATTTTTACCAAGTCAAGAATACTACCTCTTaGTGGTGGTCTGTGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ELAMIAQLQMTMEYFYQVKNTTS*WWSVRN Trigger: ATTTCTCACAGACCACCACAAAGAGGTAGTATTCTT...GACTTGGTAAAAATATTCCATAGTCATCTGCAATTGGGCAATCATAGCTAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS GCA 72 bp | GGTGAGGGGGATGCTGTGGATGCTCTCAGGCAGAGTTaGCATCCAGTCGGCGAATTTCAGCTCGTTTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GEGDAVDALRQS*HPVGEFQLVFP Trigger: GGGAAAAACGAGCTGAAATTCGCCGACTGGATGGCAACTCTGCCTGAGAGCATCCACAGCATCCCCCTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 72 bp | GGCAGTGACAATATTGATGCCGCTCTCTCCTGGCTTTaGGGTACGGATCCACTGCATCATGGCGGGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSDNIDAALSWL*GTDPLHHGGKS Trigger: GCTCTTCCCGCCATGATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGCGGCATCAATATTGTCACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 90 bp | TGGATGCCTGAAGAAACTGGATCAATTTCTCTGGGTCTGTCGTGTTaGCCCAGGGTGCTGGCATCATCTGTCCAGGCCAGAGGAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WMPEETGSISLGLSC*PRVLASSVQARGRA Trigger: TGCCCTTCCTCTGGCCTGGACAGATGATGCCAGCACCCTGGGCAAACACGACAGACCCAGAGAAATTGATCCAGTTTCTTCAGGCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS GCA 72 bp | ATGCCGCTCTCTCCTGGCTTTTGGGTACGGATCCACTaGATCATGGCGGGAAGAGCTCTCTCTGTGATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: MPLSPGFWVRIH*IMAGRALSVIV Trigger: AACAATCACAGAGAGAGCTCTTCCCGCCATGATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGCGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 72 bp | CTGTCCAGGCCAGAGGAAGGGCACTTCCAGTGCCACTaGACTGTGGTAGAAGACCAGTACTTGATAGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSRPEEGHFQCH*TVVEDQYLIVL Trigger: AAGGACTATCAAGTACTGGTCTTCTACCACAGTCCAGTGGCACTGGAAGTGCCCTTCCTCTGGCCTGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 72 bp | GCAGTGACAATATTGATGCCGCTCTCTCCTGGCTTTTaGGTACGGATCCACTGCATCATGGCGGGAAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AVTILMPLSPGF*VRIHCIMAGRA Trigger: AGCTCTTCCCGCCATGATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGCGGCATCAATATTGTCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS GCA 72 bp | CATCATCTGTCCAGGCCAGAGGAAGGGCACTTCCAGTaGCACTGGACTGTGGTAGAAGACCAGTACTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: HHLSRPEEGHFQ*HWTVVEDQYLI Trigger: TATCAAGTACTGGTCTTCTACCACAGTCCAGTGGCACTGGAAGTGCCCTTCCTCTGGCCTGGACAGATGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS GCA 72 bp | AAGAAACTGGATCAATTTCTCTGGGTCTGTCGTGTTTaGCCAGGGTGCTGGCATCATCTGTCCAGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KKLDQFLWVCRV*PGCWHHLSRPE Trigger: CTCTGGCCTGGACAGATGATGCCAGCACCCTGGGCAAACACGACAGACCCAGAGAAATTGATCCAGTTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 72 bp | AAAATCGGCAGTGACAATATTGATGCCGCTCTCTCCTaGCTTTTGGGTACGGATCCACTGCATCATGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: KIGSDNIDAALS*LLGTDPLHHGG Trigger: CCCGCCATGATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGCGGCATCAATATTGTCACTGCCGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 90 bp | TACAAAATCGGCAGTGACAATATTGATGCCGCTCTCTCCTGGCTTTaGGGTACGGATCCACTGCATCATGGCGGGAAGAGCTCTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: YKIGSDNIDAALSWL*GTDPLHHGGKSSLC Trigger: ACAGAGAGAGCTCTTCCCGCCATGATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGCGGCATCAATATTGTCACTGCCGATTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS TCA 72 bp | CCGGGCCTACTGGAGAAGCTTCATCAATGTAGAAGCTaGAGGAATCATGGGACCCTGGGATGGCTAAATTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGLLEKLHQCRS*RNHGTLGWLNW Trigger: CCAATTTAGCCATCCCAGGGTCCCATGATTCCTTCAGCTTCTACATTGATGAAGCTTCTCCAGTAGGCCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 90 bp | CCGCATCAACTTCTTGGCTACAGTTCCGAACACAGAGACAAAGTTTaGAACTGTTTCTGGCTGCTCCGGGCCTACTGGAGAAGCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PHQLLGYSSEHRDKV*NCFWLLRAYWRSFI Trigger: GATGAAGCTTCTCCAGTAGGCCCGGAGCAGCCAGAAACAGTTCAAAACTTTGTCTCTGTGTTCGGAACTGTAGCCAAGAAGTTGATGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS TCA 72 bp | TCGAGACCCTCGTTGACTTTGGCACTGAATAAGCCGTaGGCAAAATACAGTTCATTGTCTGGGTCTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRPSLTLALNKP*AKYSSLSGSLG Trigger: GCCCAGAGACCCAGACAATGAACTGTATTTTGCTCACGGCTTATTCAGTGCCAAAGTCAACGAGGGTCTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 72 bp | CTTCTTGGCTACAGTTCCGAACACAGAGACAAAGTTTaGAACTGTTTCTGGCTGCTCCGGGCCTACTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLGYSSEHRDKV*NCFWLLRAYWR Trigger: TCTCCAGTAGGCCCGGAGCAGCCAGAAACAGTTCAAAACTTTGTCTCTGTGTTCGGAACTGTAGCCAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS TCA 72 bp | TTCTTGGCTACAGTTCCGAACACAGAGACAAAGTTTTaGACTGTTTCTGGCTGCTCCGGGCCTACTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FLATVPNTETKF*TVSGCSGPTGE Trigger: TTCTCCAGTAGGCCCGGAGCAGCCAGAAACAGTTCAAAACTTTGTCTCTGTGTTCGGAACTGTAGCCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 72 bp | AGCCGTGAGCAAAATACAGTTCATTGTCTGGGTCTCTaGGCTTGGTGGAAATTCGAAGGTCGAAGTAACGGA | + |
|
Preference number: 6 (lower is better) Translates to: SREQNTVHCLGL*AWWKFEGRSNG Trigger: TCCGTTACTTCGACCTTCGAATTTCCACCAAGCCCAGAGACCCAGACAATGAACTGTATTTTGCTCACGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 90 bp | GTGCTGATAAAGTCACCAAGTTCTACAAAATCGGCAGTGACAATATaGATGCCGCTCTCTCCTGGCTTTTGGGTACGGATCCACTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: VLIKSPSSTKSAVTI*MPLSPGFWVRIHCI Trigger: GATGCAGTGGATCCGTACCCAAAAGCCAGGAGAGAGCGGCATCAATATTGTCACTGCCGATTTTGTAGAACTTGGTGACTTTATCAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS TCA 72 bp | AATGAGCCCTTCTTTCTTCTCTCGGTGATGGATGCCTaGAGAAACTGGATCAATTTCTCTGGGTCTGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: NEPFFLLSVMDA*RNWINFSGSVV Trigger: CACGACAGACCCAGAGAAATTGATCCAGTTTCTTCAGGCATCCATCACCGAGAGAAGAAAGAAGGGCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 72 bp | AAGTCACCAAGTTCTACAAAATCGGCAGTGACAATATaGATGCCGCTCTCTCCTGGCTTTTGGGTACGGATC | + |
|
Preference number: 6 (lower is better) Translates to: KSPSSTKSAVTI*MPLSPGFWVRI Trigger: GATCCGTACCCAAAAGCCAGGAGAGAGCGGCATCAATATTGTCACTGCCGATTTTGTAGAACTTGGTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 90 bp | AAGTCCAAGAATACTACCTCTTTGTGGTGGTCTGTGAGAAATGCATaGATCTCTTCGAGACCCTCGTTGACTTTGGCACTGAATAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KSKNTTSLWWSVRNA*ISSRPSLTLALNKP Trigger: CGGCTTATTCAGTGCCAAAGTCAACGAGGGTCTCGAAGAGATCAATGCATTTCTCACAGACCACCACAAAGAGGTAGTATTCTTGGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 72 bp | AAAGTTTTGAACTGTTTCTGGCTGCTCCGGGCCTACTaGAGAAGCTTCATCAATGTAGAAGCTGAAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: KVLNCFWLLRAY*RSFINVEAEGI Trigger: GATTCCTTCAGCTTCTACATTGATGAAGCTTCTCCAGTAGGCCCGGAGCAGCCAGAAACAGTTCAAAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 72 bp | AATACTACCTCTTTGTGGTGGTCTGTGAGAAATGCATaGATCTCTTCGAGACCCTCGTTGACTTTGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: NTTSLWWSVRNA*ISSRPSLTLAL Trigger: CAGTGCCAAAGTCAACGAGGGTCTCGAAGAGATCAATGCATTTCTCACAGACCACCACAAAGAGGTAGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 72 bp | TCGTCTGAGTGGCTAACCATTTCCGCATCAACTTCTTaGCTACAGTTCCGAACACAGAGACAAAGTTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSEWLTISASTS*LQFRTQRQSFE Trigger: TTCAAAACTTTGTCTCTGTGTTCGGAACTGTAGCCAAGAAGTTGATGCGGAAATGGTTAGCCACTCAGACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CCA 72 bp | AAATGGTTGAAGTCCAAGAATACTACCTCTTTGTGGTaGTCTGTGAGAAATGCATTGATCTCTTCGAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: KWLKSKNTTSLW*SVRNALISSRP Trigger: GGGTCTCGAAGAGATCAATGCATTTCTCACAGACCACCACAAAGAGGTAGTATTCTTGGACTTCAACCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||
| CDS CAA 72 bp | TGGGCACATCTTGTTTCCATAGATGTCTTTCAGCATTaGGACCAGTTTTTCATGGTGATATTTTTGCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: WAHLVSIDVFQH*DQFFMVIFLHP Trigger: GGGATGCAAAAATATCACCATGAAAAACTGGTCCAAATGCTGAAAGACATCTATGGAAACAAGATGTGCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061925.5 |
||