Pregenerated sensors for PLCXD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064247Ensembl transcript IDs: ENSMUST00000086687.10, ENSMUST00000112534.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGAGGCCGGGGTGCACCAGTGTAGGCATGGCAAGAGCTGGGGCTaGCAGTGCCACGTTCTCACCTGCTCCCTCCCAGGGAAGACCACA | + |
|
Preference number: 1 (lower is better) Translates to: WEAGVHQCRHGKSWG*QCHVLTCSLPGKTT Trigger: TGTGGTCTTCCCTGGGAGGGAGCAGGTGAGAACGTGGCACTGTCAGCCCCAGCTCTTGCCATGCCTACACTGGTGCACCCCGGCCTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 90 bp | GCCACCCTGATGCAGAGCTGCAGAAGGCCACTGTCCTGTCCACATTaGGGGGCCTGCATCTGCCTCCCGCACTGTTGGAGTCAGCGTTGG | + |
|
Preference number: 1 (lower is better) Translates to: ATLMQSCRRPLSCPH*GACICLPHCWSQRW Trigger: CCAACGCTGACTCCAACAGTGCGGGAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAGTGGCCTTCTGCAGCTCTGCATCAGGGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 90 bp | GATCACCTAAGTCCCCCGCCCCTGCAGGTACACTCCACCATGCTCTaGAGCCCTGGCCGTGTCTGCAATCTCAGGGCGTGGGCTAGACGA | + |
|
Preference number: 1 (lower is better) Translates to: DHLSPPPLQVHSTML*SPGRVCNLRAWARR Trigger: TCGTCTAGCCCACGCCCTGAGATTGCAGACACGGCCAGGGCTCCAGAGCATGGTGGAGTGTACCTGCAGGGGCGGGGGACTTAGGTGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 90 bp | TTCTCACCTGCTCCCTCCCAGGGAAGACCACACTCATCCAGGCTCTaGCGGGTGAGGCTGCTTTGCAGCCGCGGGACCAACCGTTTGCTA | + |
|
Preference number: 1 (lower is better) Translates to: FSPAPSQGRPHSSRL*RVRLLCSRGTNRLL Trigger: TAGCAAACGGTTGGTCCCGCGGCTGCAAAGCAGCCTCACCCGTCAGAGCCTGGATGAGTGTGGTCTTCCCTGGGAGGGAGCAGGTGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 90 bp | GACCTCCCAGCATGCCTGGTGGTGATTTTTGTGTGTCCCTGCAGCTaGCTCTATAAGGAGGCGGTGGTGCAGCAGGTGCAGGAGCTGCCA | + |
|
Preference number: 1 (lower is better) Translates to: DLPACLVVIFVCPCS*LYKEAVVQQVQELP Trigger: TGGCAGCTCCTGCACCTGCTGCACCACCGCCTCCTTATAGAGCCAGCTGCAGGGACACACAAAAATCACCACCAGGCATGCTGGGAGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 90 bp | CGTTGCCTGTCTGGGGCAAGGTCAGGCGGGATTCCCCCAAGAATGTaGTGTTCATGCCCACAGAAGACCCTGAAGTTCTGCACCGGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: RCLSGARSGGIPPRM*CSCPQKTLKFCTGP Trigger: TGGCCCGGTGCAGAACTTCAGGGTCTTCTGTGGGCATGAACATCACATTCTTGGGGGAATCCCGCCTGACCTTGCCCCAGACAGGCAACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 90 bp | CATGAGGGGGAGGCTGCGACGTGTCATCTCCTCCAGGGAGTCCACTaGGTGCAGGAGGATGTAGCACAGGTTCTCAGTGATGTTGATCCC | + |
|
Preference number: 1 (lower is better) Translates to: HEGEAATCHLLQGVH*VQEDVAQVLSDVDP Trigger: GGGATCAACATCACTGAGAACCTGTGCTACATCCTCCTGCACCCAGTGGACTCCCTGGAGGAGATGACACGTCGCAGCCTCCCCCTCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 90 bp | TACCATCTCTCAGCACGCCCTGAGACCTCCCAGCATGCCTGGTGGTaGTTTTTGTGTGTCCCTGCAGCTGGCTCTATAAGGAGGCGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: YHLSARPETSQHAWW*FLCVPAAGSIRRRW Trigger: CCACCGCCTCCTTATAGAGCCAGCTGCAGGGACACACAAAAATCACCACCAGGCATGCTGGGAGGTCTCAGGGCGTGCTGAGAGATGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 90 bp | GAACCGCAGCAGCACATCTGTCTTCACTGCATTTCCCCACCAATATaGGATCGCAGGCCACAGCTGATCATAACGGCTGACTGTGGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: EPQQHICLHCISPPI*DRRPQLIITADCGL Trigger: GAGGCCACAGTCAGCCGTTATGATCAGCTGTGGCCTGCGATCCCATATTGGTGGGGAAATGCAGTGAAGACAGATGTGCTGCTGCGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 90 bp | CTGGGTCTGAAGGTCTCCGAAGTGGTGACCCCCGTCTTGGGGATGTaGCAGTTAGGGAGACAGCAGTTTGCAATTCAGGCTGATGACCTT | + |
|
Preference number: 1 (lower is better) Translates to: LGLKVSEVVTPVLGM*QLGRQQFAIQADDL Trigger: AAGGTCATCAGCCTGAATTGCAAACTGCTGTCTCCCTAACTGCCACATCCCCAAGACGGGGGTCACCACTTCGGAGACCTTCAGACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 90 bp | AGAAGTGACACATACGTGGCCACCATGTGTTCTGCAACAGCATCATaGCAGCAGAACATTCTGGGCCCTGGCCTGCTGGGTCTGAAGGTC | + |
|
Preference number: 1 (lower is better) Translates to: RSDTYVATMCSATAS*QQNILGPGLLGLKV Trigger: GACCTTCAGACCCAGCAGGCCAGGGCCCAGAATGTTCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTGTCACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086687.10 ENSMUST00000112534.8 |
||
| 3UTR TCA 90 bp | CATCACCCAGGCTGCCTATGGCCGGTTCAGGAAACTGTTCCCCATTaGCGCCCCTTCTGCCCTCCCACATTGACTGACAGTAACTTATTA | + |
|
Preference number: 1 (lower is better) Translates to: HHPGCLWPVQETVPH*RPFCPPTLTDSNLL Trigger: TAATAAGTTACTGTCAGTCAATGTGGGAGGGCAGAAGGGGCGTCAATGGGGAACAGTTTCCTGAACCGGCCATAGGCAGCCTGGGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 90 bp | CCTTGGGAGCAGAGACTGTTTCCAAGGCCTGGGTCTAGCCTGGGCTaGCAGAGACCACAAAAACATCCGCACATGTGCGTTAGTTCAAAA | + |
|
Preference number: 1 (lower is better) Translates to: PWEQRLFPRPGSSLG*QRPQKHPHMCVSSK Trigger: TTTTGAACTAACGCACATGTGCGGATGTTTTTGTGGTCTCTGGCAGCCCAGGCTAGACCCAGGCCTTGGAAACAGTCTCTGCTCCCAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 90 bp | AGTGTCAGAATAACAGGTCTGAGTCAGCCTGCTCAAGGCTGGGGATaGTATACATTGACCTACACAAGAATCTGCTCAGAGCCCAACTGC | + |
|
Preference number: 1 (lower is better) Translates to: SVRITGLSQPAQGWG*YTLTYTRICSEPNC Trigger: GCAGTTGGGCTCTGAGCAGATTCTTGTGTAGGTCAATGTATAGCATCCCCAGCCTTGAGCAGGCTGACTCAGACCTGTTATTCTGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 90 bp | ATCCACAGTGTCAGAATAACAGGTCTGAGTCAGCCTGCTCAAGGCTaGGGATGCTATACATTGACCTACACAAGAATCTGCTCAGAGCCC | + |
|
Preference number: 1 (lower is better) Translates to: IHSVRITGLSQPAQG*GCYTLTYTRICSEP Trigger: GGGCTCTGAGCAGATTCTTGTGTAGGTCAATGTATAGCATCCCCAGCCTTGAGCAGGCTGACTCAGACCTGTTATTCTGACACTGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 90 bp | TGTCAGCTATCCCAGGAATATCTCAGGAAGACAGGTTCAGCCTTTTaGGTTATTGGCATCTTGGAGAAGAGCAGCACAGGTGACAGAATA | + |
|
Preference number: 1 (lower is better) Translates to: CQLSQEYLRKTGSAF*VIGILEKSSTGDRI Trigger: TATTCTGTCACCTGTGCTGCTCTTCTCCAAGATGCCAATAACCCAAAAGGCTGAACCTGTCTTCCTGAGATATTCCTGGGATAGCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCACTGTCCTGTCCACATTGCGGGGCCTGCATCTGCCTCCCGCACTGTTGGACGATGGGCAGGGTGGTaGCCCACACCGCCCTCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: GHCPVHIAGPASASRTVGRWAGW*PTPPSR Trigger: CCGGGAGGGCGGTGTGGGCCACCACCCTGCCCATCG...TCCAACAGTGCGGGAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAGTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCCAACTTGGGTGAGTCGTGTGGGGGTGCCCACCCGTGCCTGTACCATCTCTGGGCTCTGCCCCGGCTaGTGTGCACACACCCACTCG | + |
|
Preference number: 2 (lower is better) Translates to: TPTWVSRVGVPTRACTISGLCPG*CAHTHS Trigger: CGAGTGGGTGTGTGCACAGCAGCCGGGGCAGAGCCC...AGAGATGGTACAGGCACGGGTGGGCACCCCCACACGACTCACCCAAGTTGGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGTACACTCCACCATGCTCTGGAGCCCTGGCCGTGTCTGCAATCTCAGGGCGGACCCCAACTTGGGTaGGTCGTGTGGGGGTGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: AGTLHHALEPWPCLQSQGGPQLG*VVWGCP Trigger: TGGGCACCCCCACACGACTCACCCAAGTTGGGGTCC...GCCCTGAGATTGCAGACACGGCCAGGGCTCCAGAGCATGGTGGAGTGTACCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCCTGGTGCACGTGACTGATGTGAGCCACCCTGATGCAGAGCTGCAGAAGGCCCGGTGGTGCAGCAGGTaGAGGAGCTGCCAGAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VLVHVTDVSHPDAELQKARWCSR*RSCQRV Trigger: CACCCTCTGGCAGCTCCTGCACCTGCTGCACCACCG...GGCCTTCTGCAGCTCTGCATCAGGGTGGCTCACATCAGTCACGTGCACCAGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CAA 90 bp | AGCCACCCTGATGCAGAGCTGCAGAAGGCCACTGTCCTGTCCACATaGCGGGGCCTGCATCTGCCTCCCGCACTGTTGGAGTCAGCGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SHPDAELQKATVLST*RGLHLPPALLESAL Trigger: CAACGCTGACTCCAACAGTGCGGGAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAGTGGCCTTCTGCAGCTCTGCATCAGGGTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGCACGTGACTGATGTGAGCCACCCTGATGCAGAGCTGCAGAAGGCCACTGTCGACCTGGTGCCGGGGTaGGTGTGGTACGATGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VHVTDVSHPDAELQKATVDLVPG*VWYDGQ Trigger: CTGCCCATCGTACCACACTCACCCCGGCACCAGGTC...GACAGTGGCCTTCTGCAGCTCTGCATCAGGGTGGCTCACATCAGTCACGTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | CACGCCCTGAGACCTCCCAGCATGCCTGGTGGTGATTTTTGTGTGTCCCTGCAGAGCAGGTGCAGGAGCTaGCAGAGGGTGATGCGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: HALRPPSMPGGDFCVSLQSRCRS*QRVMRP Trigger: GGGCCGCATCACCCTCTGGCAGCTCCTGCACCTGCT...CTGCAGGGACACACAAAAATCACCACCAGGCATGCTGGGAGGTCTCAGGGCGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCACTGTCCTGTCCACATTGCGGGGCCTGCATCTGCCTCCCGCACTGTTGGAGAACATTCTGGGCCCTaGCCTGCTGGGTCTGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: GHCPVHIAGPASASRTVGEHSGP*PAGSEG Trigger: ACCTTCAGACCCAGCAGGCCAGGGCCCAGAATGTTC...TCCAACAGTGCGGGAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGGAGCTTCCCTTGGGAGCAGAGACTGTTTCCAAGGCCTGGGTCTAGCCTGGGCCTTGGCCCTTCATaGTCTCCAGGAACCGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GWSFPWEQRLFPRPGSSLGLGPS*SPGTAA Trigger: TGCTGCGGTTCCTGGAGACCATGAAGGGCCAAGGCC...CAGGCTAGACCCAGGCCTTGGAAACAGTCTCTGCTCCCAAGGGAAGCTCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGCACGTGACTGATGTGAGCCACCCTGATGCAGAGCTGCAGAAGGCCACTGTCCACTCCACCATGCTCTaGAGCCCTGGCCGTGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VHVTDVSHPDAELQKATVHSTML*SPGRVC Trigger: GCAGACACGGCCAGGGCTCCAGAGCATGGTGGAGTG...GACAGTGGCCTTCTGCAGCTCTGCATCAGGGTGGCTCACATCAGTCACGTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCACTGTCCTGTCCACATTGCGGGGCCTGCATCTGCCTCCCGCACTGTTGGAGGGTCTAGCCTGGGCTaGCAGAGACCACAAAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: GHCPVHIAGPASASRTVGGSSLG*QRPQKH Trigger: ATGTTTTTGTGGTCTCTGGCAGCCCAGGCTAGACCC...TCCAACAGTGCGGGAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAGTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | CACGCCCTGAGACCTCCCAGCATGCCTGGTGGTGATTTTTGTGTGTCCCTGCAGATAAGGAGGCGGTGGTaGAGCAGGTGCAGGAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HALRPPSMPGGDFCVSLQIRRRW*SRCRSC Trigger: GCAGCTCCTGCACCTGCTGCACCACCGCCTCCTTAT...CTGCAGGGACACACAAAAATCACCACCAGGCATGCTGGGAGGTCTCAGGGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCCCAACTTGGGTGAGTCGTGTGGGGGTGCCCACCCGTGCCTGTACCATCTCTTCTGCAACAGCATCATaGCAGCAGAACATTCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TPTWVSRVGVPTRACTISSATAS*QQNILG Trigger: GCCCAGAATGTTCTGCTGTCATGATGCTGTTGCAGA...AGAGATGGTACAGGCACGGGTGGGCACCCCCACACGACTCACCCAAGTTGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | TACTGTGTCTCTTGTCCTCCCAGGAGAGTCACCCACGGAGCTGCGGGCCCGCGCCACATCTGTCTTCACTaGATTTCCCCACCAATATGG | + |
|
Preference number: 2 (lower is better) Translates to: YCVSCPPRRVTHGAAGPRHICLH*ISPPIW Trigger: CCATATTGGTGGGGAAATGCAGTGAAGACAGATGTG...GCGCGGGCCCGCAGCTCCGTGGGTGACTCTCCTGGGAGGACAAGAGACACAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGTACACTCCACCATGCTCTGGAGCCCTGGCCGTGTCTGCAATCTCAGGGCCTGGTTTTGTATAGGTaGCTGGGAAGAGTCCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: AGTLHHALEPWPCLQSQGLVLYR*LGRVPV Trigger: AACAGGGACTCTTCCCAGTCACCTATACAAAACCAG...GCCCTGAGATTGCAGACACGGCCAGGGCTCCAGAGCATGGTGGAGTGTACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCACTGTCCTGTCCACATTGCGGGGCCTGCATCTGCCTCCCGCACTGTTGGAATTTTTGTGTGTCCCTaGAGCTGGCTCTATAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GHCPVHIAGPASASRTVGIFVCP*SWLYKE Trigger: CTCCTTATAGAGCCAGCTGCAGGGACACACAAAAAT...TCCAACAGTGCGGGAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCGGGATTCCCCCAAGAATGTGATGTTCATGCCCACAGAAGACCCTGAAGTTCATGGGAGGCCGGGGTaGACCAGTGTAGGCATGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RRDSPKNVMFMPTEDPEVHGRPG*TSVGMA Trigger: TGCCATGCCTACACTGGTGCACCCCGGCCTCCCATG...AACTTCAGGGTCTTCTGTGGGCATGAACATCACATTCTTGGGGGAATCCCGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTCCAAGGCCTGGGTCTAGCCTGGGCTGCCAGAGACCACAAAAACATCCGCTGGGGACTTCCCCACTaGGACACAGCATGTCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: CFQGLGLAWAARDHKNIRWGLPH*DTACLQ Trigger: TTGGAGACATGCTGTGTCCCAGTGGGGAAGTCCCCA...GCGGATGTTTTTGTGGTCTCTGGCAGCCCAGGCTAGACCCAGGCCTTGGAAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCGGGATTCCCCCAAGAATGTGATGTTCATGCCCACAGAAGACCCTGAAGTTCTGTCCTGTCCACATTaGGGGGCCTGCATCTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: RRDSPKNVMFMPTEDPEVLSCPH*GACICL Trigger: GAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAG...AACTTCAGGGTCTTCTGTGGGCATGAACATCACATTCTTGGGGGAATCCCGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | CACGCCCTGAGACCTCCCAGCATGCCTGGTGGTGATTTTTGTGTGTCCCTGCAGGAAGTGACACATACGTaGCCACCATGTGTTCTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HALRPPSMPGGDFCVSLQEVTHT*PPCVLQ Trigger: TTGCAGAACACATGGTGGCCACGTATGTGTCACTTC...CTGCAGGGACACACAAAAATCACCACCAGGCATGCTGGGAGGTCTCAGGGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCACTGTCCTGTCCACATTGCGGGGCCTGCATCTGCCTCCCGCACTGTTGGATTTTGTATAGGTGACTaGGAAGAGTCCCTGTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: GHCPVHIAGPASASRTVGFCIGD*EESLLQ Trigger: TTGTAACAGGGACTCTTCCCAGTCACCTATACAAAA...TCCAACAGTGCGGGAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGCCCATTTCCCTGCCACCCAGACTTCTTGATGCTTTGTTGCCAAGTTGTTAGGTACACTCCACCATaGTCTGGAGCCCTGGCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: ESPFPCHPDFLMLCCQVVRYTPP*SGALAV Trigger: CACGGCCAGGGCTCCAGAGCATGGTGGAGTGTACCT...AACAACTTGGCAACAAAGCATCAAGAAGTCTGGGTGGCAGGGAAATGGGCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGCCCATTTCCCTGCCACCCAGACTTCTTGATGCTTTGTTGCCAAGTTGTTGGAGCCTGTCCTCTGTaGGGTCCTCTGTGGGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: ESPFPCHPDFLMLCCQVVGACPL*GPLWVS Trigger: TGACACCCACAGAGGACCGCACAGAGGACAGGCTCC...AACAACTTGGCAACAAAGCATCAAGAAGTCTGGGTGGCAGGGAAATGGGCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTACTCAGTAGCTGGGGTGGAGCTTCCCTTGGGAGCAGAGACTGTTTCCAAGGGCCACCATGTGTTCTaGAACAGCATCATGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LYSVAGVELPLGAETVSKGHHVF*NSIMTA Trigger: TGCTGTCATGATGCTGTTGCAGAACACATGGTGGCC...CTTGGAAACAGTCTCTGCTCCCAAGGGAAGCTCCACCCCAGCTACTGAGTACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | CACGCCCTGAGACCTCCCAGCATGCCTGGTGGTGATTTTTGTGTGTCCCTGCAGCTGTTACAAGGGAAATaGTGCTTGTACTCAGTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: HALRPPSMPGGDFCVSLQLLQGK*CLYSVA Trigger: AGCTACTGAGTACAAGCACCATTTCCCTTGTAACAG...CTGCAGGGACACACAAAAATCACCACCAGGCATGCTGGGAGGTCTCAGGGCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGAAGAGCAGCACAGGTGACAGAATAGACCTATCTAGGTCTGGAAGACTCTCTATAAGGAGGCGGTaGTGCAGCAGGTGCAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LEKSSTGDRIDLSRSGRLSIRRR*CSRCRS Trigger: GCTCCTGCACCTGCTGCACCACCGCCTCCTTATAGA...GAGTCTTCCAGACCTAGATAGGTCTATTCTGTCACCTGTGCTGCTCTTCTCCAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGCCCATTTCCCTGCCACCCAGACTTCTTGATGCTTTGTTGCCAAGTTGTTGCTGATCATAACGGCTaGCTGTGGCCTCATCCTCGT | + |
|
Preference number: 2 (lower is better) Translates to: ESPFPCHPDFLMLCCQVVADHNG*LWPHPR Trigger: ACGAGGATGAGGCCACAGTCAGCCGTTATGATCAGC...AACAACTTGGCAACAAAGCATCAAGAAGTCTGGGTGGCAGGGAAATGGGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGAAGAGCAGCACAGGTGACAGAATAGACCTATCTAGGTCTGGAAGACTCGGGTGGAGCTTCCCTTaGGAGCAGAGACTGTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LEKSSTGDRIDLSRSGRLGWSFP*EQRLFP Trigger: TGGAAACAGTCTCTGCTCCCAAGGGAAGCTCCACCC...GAGTCTTCCAGACCTAGATAGGTCTATTCTGTCACCTGTGCTGCTCTTCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGAAGAGCAGCACAGGTGACAGAATAGACCTATCTAGGTCTGGAAGACTCCTTGTACTCAGTAGCTaGGGTGGAGCTTCCCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LEKSSTGDRIDLSRSGRLLVLSS*GGASLG Trigger: CCCAAGGGAAGCTCCACCCCAGCTACTGAGTACAAG...GAGTCTTCCAGACCTAGATAGGTCTATTCTGTCACCTGTGCTGCTCTTCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CAA 90 bp | ATAACAGGTCTGAGTCAGCCTGCTCAAGGCTGGGGATGCTATACATaGACCTACACAAGAATCTGCTCAGAGCCCAACTGCTTCATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ITGLSQPAQGWGCYT*TYTRICSEPNCFMD Trigger: ATCCATGAAGCAGTTGGGCTCTGAGCAGATTCTTGTGTAGGTCAATGTATAGCATCCCCAGCCTTGAGCAGGCTGACTCAGACCTGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGAGAAGAGCAGCACAGGTGACAGAATAGACCTATCTAGGTCTGGAAGACTCCAAAAATGTTCACGATaGAGCCCGCGAGATAGTCGT | + |
|
Preference number: 2 (lower is better) Translates to: LEKSSTGDRIDLSRSGRLQKCSR*SPRDSR Trigger: ACGACTATCTCGCGGGCTGCATCGTGAACATTTTTG...GAGTCTTCCAGACCTAGATAGGTCTATTCTGTCACCTGTGCTGCTCTTCTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTACTCAGTAGCTGGGGTGGAGCTTCCCTTGGGAGCAGAGACTGTTTCCAAGAAACATCCGCACATGTaGGTTAGTTCAAAATCCGTT | + |
|
Preference number: 2 (lower is better) Translates to: LYSVAGVELPLGAETVSKKHPHM*VSSKSV Trigger: AACGGATTTTGAACTAACGCACATGTGCGGATGTTT...CTTGGAAACAGTCTCTGCTCCCAAGGGAAGCTCCACCCCAGCTACTGAGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGAGAAGAGCAGCACAGGTGACAGAATAGACCTATCTAGGTCTGGAAGACTCGCTCAAGGCTGGGGATaGTATACATTGACCTACACA | + |
|
Preference number: 2 (lower is better) Translates to: LEKSSTGDRIDLSRSGRLAQGWG*YTLTYT Trigger: TGTGTAGGTCAATGTATAGCATCCCCAGCCTTGAGC...GAGTCTTCCAGACCTAGATAGGTCTATTCTGTCACCTGTGCTGCTCTTCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | GGCGGTGGTGCAGCAGGTGCAGGAGCTGCCAGAGGGTaGTGCGGCCCACGTGACCGTCGTCATCACCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GGGAAGAGAARG*CGPRDRRHHPG Trigger: GCCTGGGTGATGACGACGGTCACGTGGGCCGCATCACCCTCTGGCAGCTCCTGCACCTGCTGCACCACCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | CGAGCTGAAGGCCGCACTGGAGGCGTCAGTGCTGCGTaGCACAGGCAGGCAGGTCCTCACGCTATGTGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: RAEGRTGGVSAA*HRQAGPHAMCA Trigger: CGCACACATAGCGTGAGGACCTGCCTGCCTGTGGCACGCAGCACTGACGCCTCCAGTGCGGCCTTCAGCTCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | AGTCCCCCGCCCCTGCAGGTACACTCCACCATGCTCTaGAGCCCTGGCCGTGTCTGCAATCTCAGGGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPPPLQVHSTML*SPGRVCNLRAW Trigger: CCACGCCCTGAGATTGCAGACACGGCCAGGGCTCCAGAGCATGGTGGAGTGTACCTGCAGGGGCGGGGGACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | GCTCCCTCCCAGGGAAGACCACACTCATCCAGGCTCTaGCGGGTGAGGCTGCTTTGCAGCCGCGGGACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: APSQGRPHSSRL*RVRLLCSRGTN Trigger: GTTGGTCCCGCGGCTGCAAAGCAGCCTCACCCGTCAGAGCCTGGATGAGTGTGGTCTTCCCTGGGAGGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | GGGGTGCACCAGTGTAGGCATGGCAAGAGCTGGGGCTaGCAGTGCCACGTTCTCACCTGCTCCCTCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GVHQCRHGKSWG*QCHVLTCSLPG Trigger: CCCTGGGAGGGAGCAGGTGAGAACGTGGCACTGTCAGCCCCAGCTCTTGCCATGCCTACACTGGTGCACCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | GATGTTGGTGCATTGAGGGCTCTGCCCCGGCTGCTGTaGACACACCCACTCGGTCATGAGGGGGAGGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: DVGALRALPRLL*THPLGHEGEAA Trigger: CGCAGCCTCCCCCTCATGACCGAGTGGGTGTGTGCACAGCAGCCGGGGCAGAGCCCTCAATGCACCAACATC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTGTGTCTCTTGTCCTCCCAGGAGAGTCACCCACGGAGCTGCGGGCCCGCGCGGGGTGGAGCTTCCCTaGGGAGCAGAGACTGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YCVSCPPRRVTHGAAGPRGVELP*GAETVS Trigger: GGAAACAGTCTCTGCTCCCAAGGGAAGCTCCACCCC...GCGCGGGCCCGCAGCTCCGTGGGTGACTCTCCTGGGAGGACAAGAGACACAGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | TGTGTCCCTGCAGCTGGCTCTATAAGGAGGCGGTGGTaGAGCAGGTGCAGGAGCTGCCAGAGGGTGATGCGG | + |
|
Preference number: 3 (lower is better) Translates to: CVPAAGSIRRRW*SRCRSCQRVMR Trigger: CCGCATCACCCTCTGGCAGCTCCTGCACCTGCTGCACCACCGCCTCCTTATAGAGCCAGCTGCAGGGACACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | GTACACTCCACCATGCTCTGGAGCCCTGGCCGTGTCTaGAATCTCAGGGCGTGGGCTAGACGAGCTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VHSTMLWSPGRV*NLRAWARRAEG Trigger: GCCTTCAGCTCGTCTAGCCCACGCCCTGAGATTGCAGACACGGCCAGGGCTCCAGAGCATGGTGGAGTGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | TGCAGAAGGCCACTGTCCTGTCCACATTGCGGGGCCTaGATCTGCCTCCCGCACTGTTGGAGTCAGCGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CRRPLSCPHCGA*ICLPHCWSQRW Trigger: CCAACGCTGACTCCAACAGTGCGGGAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAGTGGCCTTCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | TCACGAAGCCATCCGCATCCACGAAGTCGCCTGCGATaGTGTTGGTGCATTGAGGGCTCTGCCCCGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRSHPHPRSRLR*CWCIEGSAPAA Trigger: AGCAGCCGGGGCAGAGCCCTCAATGCACCAACATCATCGCAGGCGACTTCGTGGATGCGGATGGCTTCGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | TGCTTTGCAGCCGCGGGACCAACCGTTTGCTACTCTTaGTGTCACCGTACACGCGGGGTTGCTCCCCTCACG | + |
|
Preference number: 3 (lower is better) Translates to: CFAAAGPTVCYS*CHRTRGVAPLT Trigger: CGTGAGGGGAGCAACCCCGCGTGTACGGTGACATCAAGAGTAGCAAACGGTTGGTCCCGCGGCTGCAAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | CTGACGGTTGGAGCCTGTCCTCTGTGCGGTCCTCTGTaGGTGTCAGGTCACTCTCCTTGTAGGCCTGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTVGACPLCGPL*VSGHSPCRPGC Trigger: ACACCCAGGCCTACAAGGAGAGTGACCTGACACCCACAGAGGACCGCACAGAGGACAGGCTCCAACCGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCGGGATTCCCCCAAGAATGTGATGTTCATGCCCACAGAAGACCCTGAAGTTACCGTACACGCGGGGTaGCTCCCCTCACGCCTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RRDSPKNVMFMPTEDPEVTVHAG*LPSRLR Trigger: GCGCAGGCGTGAGGGGAGCAACCCCGCGTGTACGGT...AACTTCAGGGTCTTCTGTGGGCATGAACATCACATTCTTGGGGGAATCCCGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | TGCCCACCCGTGCCTGTACCATCTCTCAGCACGCCCTaGGACCTCCCAGCATGCCTGGTGGTGATTTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CPPVPVPSLSTP*DLPACLVVIFV Trigger: CACAAAAATCACCACCAGGCATGCTGGGAGGTCTCAGGGCGTGCTGAGAGATGGTACAGGCACGGGTGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | GGTTTCAGGGACCTGACGGTTGGAGCCTGTCCTCTGTaGGGTCCTCTGTGGGTGTCAGGTCACTCTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GFRDLTVGACPL*GPLWVSGHSPC Trigger: ACAAGGAGAGTGACCTGACACCCACAGAGGACCGCACAGAGGACAGGCTCCAACCGTCAGGTCCCTGAAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | ATGACTGGTGTGATCCCCCATGGGAGGATCTGCTCATaGGTTGCCTGTCTGGGGCAAGGTCAGGCGGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: MTGVIPHGRICS*VACLGQGQAGF Trigger: GAATCCCGCCTGACCTTGCCCCAGACAGGCAACGCATGAGCAGATCCTCCCATGGGGGATCACACCAGTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | GGCTGCCTATGGCCGGTTCAGGAAACTGTTCCCCATTaGCGCCCCTTCTGCCCTCCCACATTGACTGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: GCLWPVQETVPH*RPFCPPTLTDS Trigger: ACTGTCAGTCAATGTGGGAGGGCAGAAGGGGCGTCAATGGGGAACAGTTTCCTGAACCGGCCATAGGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | CACTCCTCATCTCCCACCTCTGACCACACCCCTTCATaGTGCCTGATCTTGCTCCTATCCCCAACCACGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HSSSPTSDHTPS*CLILLLSPTTP Trigger: GGGCGTGGTTGGGGATAGGAGCAAGATCAGGCATCATGAAGGGGTGTGGTCAGAGGTGGGAGATGAGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | CTCCCAGCATGCCTGGTGGTGATTTTTGTGTGTCCCTaGAGCTGGCTCTATAAGGAGGCGGTGGTGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPACLVVIFVCP*SWLYKEAVVQQ Trigger: CTGCTGCACCACCGCCTCCTTATAGAGCCAGCTGCAGGGACACACAAAAATCACCACCAGGCATGCTGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | CAACGAACAGACCATCTGGGCGGCCTTGGCCCTTCATaGTCTCCAGGAACCGCAGCAGCACATCTGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QRTDHLGGLGPS*SPGTAAAHLSS Trigger: TGAAGACAGATGTGCTGCTGCGGTTCCTGGAGACCATGAAGGGCCAAGGCCGCCCAGATGGTCTGTTCGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | CTCAGTGATGTTGATCCCAGCAACGAACAGACCATCTaGGCGGCCTTGGCCCTTCATGGTCTCCAGGAACCG | + |
|
Preference number: 3 (lower is better) Translates to: LSDVDPSNEQTI*AALALHGLQEP Trigger: CGGTTCCTGGAGACCATGAAGGGCCAAGGCCGCCCAGATGGTCTGTTCGTTGCTGGGATCAACATCACTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | GAGGCTGCGACGTGTCATCTCCTCCAGGGAGTCCACTaGGTGCAGGAGGATGTAGCACAGGTTCTCAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: EAATCHLLQGVH*VQEDVAQVLSD Trigger: ATCACTGAGAACCTGTGCTACATCCTCCTGCACCCAGTGGACTCCCTGGAGGAGATGACACGTCGCAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | GCATGCCTGGTGGTGATTTTTGTGTGTCCCTGCAGCTaGCTCTATAAGGAGGCGGTGGTGCAGCAGGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ACLVVIFVCPCS*LYKEAVVQQVQ Trigger: CTGCACCTGCTGCACCACCGCCTCCTTATAGAGCCAGCTGCAGGGACACACAAAAATCACCACCAGGCATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | ACATACGTGGCCACCATGTGTTCTGCAACAGCATCATaGCAGCAGAACATTCTGGGCCCTGGCCTGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TYVATMCSATAS*QQNILGPGLLG Trigger: ACCCAGCAGGCCAGGGCCCAGAATGTTCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086687.10 ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | CCCCAAGAATGTGATGTTCATGCCCACAGAAGACCCTaGAGTTCTGCACCGGGCCACAGTTCTCCTTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PQECDVHAHRRP*SSAPGHSSPSP Trigger: AGGGGAAGGAGAACTGTGGCCCGGTGCAGAACTTCAGGGTCTTCTGTGGGCATGAACATCACATTCTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | TCTGGGGCAAGGTCAGGCGGGATTCCCCCAAGAATGTaGTGTTCATGCCCACAGAAGACCCTGAAGTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGARSGGIPPRM*CSCPQKTLKFC Trigger: GCAGAACTTCAGGGTCTTCTGTGGGCATGAACATCACATTCTTGGGGGAATCCCGCCTGACCTTGCCCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | TGTGACATGATACCCCGGCAGTTTCTGTCTGCAGACTaGTTCTGTCCTCTGGCCACACCCCTAGACCACACT | + |
|
Preference number: 3 (lower is better) Translates to: CDMIPRQFLSAD*FCPLATPLDHT Trigger: AGTGTGGTCTAGGGGTGTGGCCAGAGGACAGAAGCAGTCTGCAGACAGAAACTGCCGGGGTATCATGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | GGTGACTGGGAAGAGTCCCTGTTACAAGGGAAATGGTaGTTGTACTCAGTAGCTGGGGTGGAGCTTCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GDWEESLLQGKW*LYSVAGVELPL Trigger: CAAGGGAAGCTCCACCCCAGCTACTGAGTACAAGCACCATTTCCCTTGTAACAGGGACTCTTCCCAGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | CTATGTCTTTCTGTGAATGACTGGTGTGATCCCCCATaGGAGGATCTGCTCATGCGTTGCCTGTCTGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LCLSVNDWCDPP*EDLLMRCLSGA Trigger: TGCCCCAGACAGGCAACGCATGAGCAGATCCTCCCATGGGGGATCACACCAGTCATTCACAGAAAGACATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | TCCTGTGTCTCCCTCACCGGCCTGGTTTTGTATAGGTaGCTGGGAAGAGTCCCTGTTACAAGGGAAATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SCVSLTGLVLYR*LGRVPVTREMV Trigger: CACCATTTCCCTTGTAACAGGGACTCTTCCCAGTCACCTATACAAAACCAGGCCGGTGAGGGAGACACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | GAGCACCTGGTGATGCGAACAGAAGTGACACATACGTaGCCACCATGTGTTCTGCAACAGCATCATGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: EHLVMRTEVTHT*PPCVLQQHHDS Trigger: GCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTGTCACTTCTGTTCGCATCACCAGGTGCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086687.10 ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | CAGCACATCTGTCTTCACTGCATTTCCCCACCAATATaGGATCGCAGGCCACAGCTGATCATAACGGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QHICLHCISPPI*DRRPQLIITAD Trigger: GTCAGCCGTTATGATCAGCTGTGGCCTGCGATCCCATATTGGTGGGGAAATGCAGTGAAGACAGATGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | ATAGGTGACTGGGAAGAGTCCCTGTTACAAGGGAAATaGTGCTTGTACTCAGTAGCTGGGGTGGAGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IGDWEESLLQGK*CLYSVAGVELP Trigger: GGGAAGCTCCACCCCAGCTACTGAGTACAAGCACCATTTCCCTTGTAACAGGGACTCTTCCCAGTCACCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | GTGTCTCCCTCACCGGCCTGGTTTTGTATAGGTGACTaGGAAGAGTCCCTGTTACAAGGGAAATGGTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VSPSPAWFCIGD*EESLLQGKWCL Trigger: CAAGCACCATTTCCCTTGTAACAGGGACTCTTCCCAGTCACCTATACAAAACCAGGCCGGTGAGGGAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | CCTACACAAGAATCTGCTCAGAGCCCAACTGCTTCATaGATGTGTGACAGGCCGGCTGACTATGTCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTQESAQSPTAS*MCDRPADYVFL Trigger: CAGAAAGACATAGTCAGCCGGCCTGTCACACATCCATGAAGCAGTTGGGCTCTGAGCAGATTCTTGTGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR TCA 72 bp | AGGGGGAAAGCCCATTTCCCTGCCACCCAGACTTCTTaGTGCTTTGTTGCCAAGTTGTTAGCACTTAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGKAHFPATQTS*CFVAKLLALSL Trigger: CAGACTAAGTGCTAACAACTTGGCAACAAAGCATCAAGAAGTCTGGGTGGCAGGGAAATGGGCTTTCCCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR GCA 72 bp | ATAACAGGTCTGAGTCAGCCTGCTCAAGGCTGGGGATaGTATACATTGACCTACACAAGAATCTGCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ITGLSQPAQGWG*YTLTYTRICSE Trigger: CTCTGAGCAGATTCTTGTGTAGGTCAATGTATAGCATCCCCAGCCTTGAGCAGGCTGACTCAGACCTGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CCA 72 bp | TCCCAGGAATATCTCAGGAAGACAGGTTCAGCCTTTTaGGTTATTGGCATCTTGGAGAAGAGCAGCACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SQEYLRKTGSAF*VIGILEKSSTG Trigger: ACCTGTGCTGCTCTTCTCCAAGATGCCAATAACCCAAAAGGCTGAACCTGTCTTCCTGAGATATTCCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCGGGATTCCCCCAAGAATGTGATGTTCATGCCCACAGAAGACCCTGAAGTTTTCTGCCCTCCCACATaGACTGACAGTAACTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: RRDSPKNVMFMPTEDPEVFCPPT*TDSNLL Trigger: TAATAAGTTACTGTCAGTCAATGTGGGAGGGCAGAA...AACTTCAGGGTCTTCTGTGGGCATGAACATCACATTCTTGGGGGAATCCCGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGAGCTTCCCTTGGGAGCAGAGACTGTTTCCAAGGCCTGGGTCTAGCCTGCGTGGCTCCCTGGGATaGACAGGTGGTGCAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWSFPWEQRLFPRPGSSLRGSLG*TGGAGG Trigger: TCCCCCTGCACCACCTGTCCATCCCAGGGAGCCACG...CAGGCTAGACCCAGGCCTTGGAAACAGTCTCTGCTCCCAAGGGAAGCTCCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| 3UTR CAA 72 bp | GATGCAGAGCTGCAGAAGGCCACTGTCCTGTCCACATaGCGGGGCCTGCATCTGCCTCCCGCACTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DAELQKATVLST*RGLHLPPALLE Trigger: CTCCAACAGTGCGGGAGGCAGATGCAGGCCCCGCAATGTGGACAGGACAGTGGCCTTCTGCAGCTCTGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTGACACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGAGGGCTCTGCCCCGGCTaGTGTGCACACACCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: EVTHTWPPCVLQQHHDSRGLCPG*CAHTHS Trigger: CGAGTGGGTGTGTGCACAGCAGCCGGGGCAGAGCCC...TCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTGTCACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| 3UTR CAA 72 bp | CTGGGTCTGAAGGTCTCCGAAGTGGTGACCCCCGTCTaGGGGATGTGGCAGTTAGGGAGACAGCAGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLKVSEVVTPV*GMWQLGRQQFA Trigger: TGCAAACTGCTGTCTCCCTAACTGCCACATCCCCAAGACGGGGGTCACCACTTCGGAGACCTTCAGACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTGACACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGACTGCCTGGTCTCCCATaGGAGCTGCAGCTTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVTHTWPPCVLQQHHDSRLPGLP*ELQLRC Trigger: GCACCGAAGCTGCAGCTCCCATGGGAGACCAGGCAG...TCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTGTCACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS-3UTR CCA 90 bp | CACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGAACATTCTCGTGGCTCCCTGGGATaGACAGGTGGTGCAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HIRGHHVFCNSIMTAEHSRGSLG*TGGAGG Trigger: TCCCCCTGCACCACCTGTCCATCCCAGGGAGCCACG...AGAATGTTCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086687.10 ENSMUST00000112534.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTGACACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGACGTGTCGTGGCTCCCTaGGATGGACAGGTGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVTHTWPPCVLQQHHDSRRVVAP*DGQVVQ Trigger: CTGCACCACCTGTCCATCCCAGGGAGCCACGACACG...TCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTGTCACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086687.10 ENSMUST00000112534.8 |
||
| CDS-3UTR GCA 90 bp | CACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGAACATTCTCTCGGCTCTAGTCCCTaGATTAGGGGTGGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIRGHHVFCNSIMTAEHSLGSSP*IRGGVG Trigger: CCCCACCCCACCCCTAATGCAGGGACTAGAGCCGAG...AGAATGTTCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS-3UTR CCA 90 bp | GAAGTGACACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGAGGCCTTGGCCCTTCATaGTCTCCAGGAACCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVTHTWPPCVLQQHHDSRGLGPS*SPGTAA Trigger: TGCTGCGGTTCCTGGAGACCATGAAGGGCCAAGGCC...TCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTGTCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| 3UTR CAA 72 bp | GACTGGGAAGAGTCCCTGTTACAAGGGAAATGGTGCTaGTACTCAGTAGCTGGGGTGGAGCTTCCCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DWEESLLQGKWC*YSVAGVELPLG Trigger: TCCCAAGGGAAGCTCCACCCCAGCTACTGAGTACAAGCACCATTTCCCTTGTAACAGGGACTCTTCCCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTGACACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGACCACTCTTCCTACCCTaGTCGGCTCTAGTCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVTHTWPPCVLQQHHDSRPLFLP*SALVPA Trigger: TGCAGGGACTAGAGCCGAGCAGGGTAGGAAGAGTGG...TCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTGTCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS-3UTR CCA 90 bp | CACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGAACATTCTGCATTAGGGGTGGGGTaGGGACCAACTCTGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HIRGHHVFCNSIMTAEHSALGVG*GPTLTG Trigger: GCCAGTCAGAGTTGGTCCCCACCCCACCCCTAATGC...AGAATGTTCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| 3UTR CAA 72 bp | CTGAGTCAGCCTGCTCAAGGCTGGGGATGCTATACATaGACCTACACAAGAATCTGCTCAGAGCCCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQPAQGWGCYT*TYTRICSEPNC Trigger: GCAGTTGGGCTCTGAGCAGATTCTTGTGTAGGTCAATGTATAGCATCCCCAGCCTTGAGCAGGCTGACTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTGACACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGAGCTGATCATAACGGCTaGCTGTGGCCTCATCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EVTHTWPPCVLQQHHDSRADHNG*LWPHPR Trigger: ACGAGGATGAGGCCACAGTCAGCCGTTATGATCAGC...TCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTGTCACTTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS-3UTR GCA 90 bp | CACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGAACATTCTTCGCGGGGGTGTGATTaGAGCCACTCAGCTATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HIRGHHVFCNSIMTAEHSSRGCD*SHSAIS Trigger: TGAGATAGCTGAGTGGCTGCAATCACACCCCCGCGA...AGAATGTTCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS-3UTR CCA 90 bp | CACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGAACATTCTTGGGGACTTCCCCACTaGGACACAGCATGTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HIRGHHVFCNSIMTAEHSWGLPH*DTACLQ Trigger: TTGGAGACATGCTGTGTCCCAGTGGGGAAGTCCCCA...AGAATGTTCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS-3UTR GCA 90 bp | CACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGAACATTCTCAAAAATGTTCACGATaGAGCCCGCGAGATAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HIRGHHVFCNSIMTAEHSQKCSR*SPRDSR Trigger: ACGACTATCTCGCGGGCTGCATCGTGAACATTTTTG...AGAATGTTCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS-3UTR GCA 90 bp | GAAGTGACACATACGTGGCCACCATGTGTTCTGCAACAGCATCATGACAGCAGACACATCTGTCTTCACTaGATTTCCCCACCAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: EVTHTWPPCVLQQHHDSRHICLH*ISPPIW Trigger: CCATATTGGTGGGGAAATGCAGTGAAGACAGATGTG...TCTGCTGTCATGATGCTGTTGCAGAACACATGGTGGCCACGTATGTGTCACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| 3UTR CAA 72 bp | AGGAAGACAGGTTCAGCCTTTTGGGTTATTGGCATCTaGGAGAAGAGCAGCACAGGTGACAGAATAGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: RKTGSAFWVIGI*EKSSTGDRIDL Trigger: TAGGTCTATTCTGTCACCTGTGCTGCTCTTCTCCAAGATGCCAATAACCCAAAAGGCTGAACCTGTCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112534.8 |
||
| CDS CCA 90 bp | ACAGCTGAGGGCACAGCTGCGACATCCAGTCTGCCTGGTCTCCCATaGGAGCTGCAGCTTCGGTGCCTACTGTGTGCTCTGGGACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAEGTAATSSLPGLP*ELQLRCLLCALGRS Trigger: TGACCGTCCCAGAGCACACAGTAGGCACCGAAGCTGCAGCTCCCATGGGAGACCAGGCAGACTGGATGTCGCAGCTGTGCCCTCAGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS GCA 72 bp | GCACTGAGCGGCAGACTTCACCCACTCTTCCTACCCTaGTCGGCTCTAGTCCCTGCATTAGGGGTGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ALSGRLHPLFLP*SALVPALGVGW Trigger: CCACCCCACCCCTAATGCAGGGACTAGAGCCGAGCAGGGTAGGAAGAGTGGGTGAAGTCTGCCGCTCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS TCA 72 bp | CGCGGGGGTGTGATTGCAGCCACTCAGCTATCTCAGTaGGGGTGTCCTCCACCAGCGCCTTCGTGTACATCA | + |
|
Preference number: 6 (lower is better) Translates to: RGGVIAATQLSQ*GCPPPAPSCTS Trigger: TGATGTACACGAAGGCGCTGGTGGAGGACACCCTCACTGAGATAGCTGAGTGGCTGCAATCACACCCCCGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||
| CDS GCA 72 bp | AGTCTGCCTGGTCTCCCATGGGAGCTGCAGCTTCGGTaGCTACTGTGTGCTCTGGGACGGTCAACACGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLPGLPWELQLR*LLCALGRSTRS Trigger: AGAACGTGTTGACCGTCCCAGAGCACACAGTAGGCACCGAAGCTGCAGCTCCCATGGGAGACCAGGCAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086687.10 |
||