Pregenerated sensors for PLCL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038349Ensembl transcript IDs: ENSMUST00000042986.10
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTTCTCCGCTGGCAGAGATGCTCAGAGATTGGATAGAAGGGTACTaGCAACTGCTGGAAGAGACTCAGAGAAGGCAGAGCAAGCGCACA | + |
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Preference number: 1 (lower is better) Translates to: TSPLAEMLRDWIEGY*QLLEETQRRQSKRT Trigger: TGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTTCCAGCAGTTGTCAGTACCCTTCTATCCAATCTCTGAGCATCTCTGCCAGCGGAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR GCA 90 bp | AGCAGGGTAAGAGGAACGGAGGGTAGAGGGATACTTTCAGGTCATTaGACTGTTGGAAATTTGTCTTCAAGTGAACCCAGTCACTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SRVRGTEGRGILSGH*TVGNLSSSEPSHFL Trigger: GAGGAAGTGACTGGGTTCACTTGAAGACAAATTTCCAACAGTGCAATGACCTGAAAGTATCCCTCTACCCTCCGTTCCTCTTACCCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 90 bp | AGCGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATaGAAGGAGCTTAAAGATGGGTGGATTGAACCAGGCACCATGCCT | + |
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Preference number: 1 (lower is better) Translates to: SAQHILQKMHILYRV*KELKDGWIEPGTMP Trigger: AGGCATGGTGCCTGGTTCAATCCACCCATCTTTAAGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR GCA 90 bp | GACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATaGACATATTATACCGAGTATGAAAGGAGCTTAAAGATGGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: DSEKAEQAHSTFSRR*TYYTEYERSLKMGG Trigger: TCCACCCATCTTTAAGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 90 bp | CAGTCCTTGCCAAGCACTGTATCTGCCCCAACTGGTAATAGAAAATaGATTCCATACTCCAATCTCAGGAGAATGAGGTCTTTCTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: QSLPSTVSAPTGNRK*IPYSNLRRMRSFCK Trigger: TTTGCAGAAAGACCTCATTCTCCTGAGATTGGAGTATGGAATTCATTTTCTATTACCAGTTGGGGCAGATACAGTGCTTGGCAAGGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR GCA 90 bp | AAGATCAAGAACTCTGTTTTCAGCATCTTTACTCTTTTGGTAATGTaGAACAAGACCAGAGTGGCATTAAGAGCAGTCAGCACTAACGCG | + |
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Preference number: 1 (lower is better) Translates to: KIKNSVFSIFTLLVM*NKTRVALRAVSTNA Trigger: CGCGTTAGTGCTGACTGCTCTTAATGCCACTCTGGTCTTGTTGCACATTACCAAAAGAGTAAAGATGCTGAAAACAGAGTTCTTGATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 90 bp | TCAAGTGAACCCAGTCACTTCCTCCACATGCCTCGGATAATTTTATaGTATCTGGTCTGTGAAACCAGTGAACCCTCTATCACTTTTATA | + |
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Preference number: 1 (lower is better) Translates to: SSEPSHFLHMPRIIL*YLVCETSEPSITFI Trigger: TATAAAAGTGATAGAGGGTTCACTGGTTTCACAGACCAGATATCATAAAATTATCCGAGGCATGTGGAGGAAGTGACTGGGTTCACTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 90 bp | ATTCCATACTCCAATCTCAGGAGAATGAGGTCTTTCTGCAAACCTTaGAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: IPYSNLRRMRSFCKP*NFTIGCSCHNSASY Trigger: GTAACTAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAGACCTCATTCTCCTGAGATTGGAGTATGGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 90 bp | AGACTAAGTTTGACACCAAAGCAAAGCAAAAATAAATATCCTTTGTaGTTTTGCCACCCGGCTTTATCACCTGTAAGGCATGGATTGGTC | + |
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Preference number: 1 (lower is better) Translates to: RLSLTPKQSKNKYPL*FCHPALSPVRHGLV Trigger: GACCAATCCATGCCTTACAGGTGATAAAGCCGGGTGGCAAAATCACAAAGGATATTTATTTTTGCTTTGCTTTGGTGTCAAACTTAGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 90 bp | CAACTGGTAATAGAAAATGAATTCCATACTCCAATCTCAGGAGAATaGGGTCTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: QLVIENEFHTPISGE*GLSANLEISQLDVP Trigger: AGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAGACCTCATTCTCCTGAGATTGGAGTATGGAATTCATTTTCTATTACCAGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR GCA 90 bp | ATGTCTTTGCATTTAAATTTAGTACTCTACACTAAATCCAGTCCTTaGCAAGCACTGTATCTGCCCCAACTGGTAATAGAAAATGAATTC | + |
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Preference number: 1 (lower is better) Translates to: MSLHLNLVLYTKSSP*QALYLPQLVIENEF Trigger: GAATTCATTTTCTATTACCAGTTGGGGCAGATACAGTGCTTGGCAAGGACTGGATTTAGTGTAGAGTACTAAATTTAAATGCAAAGACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR-3UTR GCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACAAATGGAATCTGAGATaGCCAGGAAGCCTCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KRLREGRASAQHILQKMHKWNLR*PGSLQQ Trigger: CTGCTGGAGGCTTCCTGGGCATCTCAGATTCCATTT...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCGGGGGATCATTTCTGTaGACATCTGAAGAATGTAAA | + |
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Preference number: 2 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGGGSFL*TSEECK Trigger: TTTACATTCTTCAGATGTTCACAGAAATGATCCCCC...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR-3UTR TCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGGGTCCAAATGGAATCTaGGATGCCCAGGAAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLGPNGI*DAQEAS Trigger: GGAGGCTTCCTGGGCATCTCAGATTCCATTTGGACC...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR-3UTR TCA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTAATAAATATCCTTTGTaGTTTTGCCACCCGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: RTAHSPEDAHIIPSMKGANKYPL*FCHPAL Trigger: TAAAGCCGGGTGGCAAAATCACAAAGGATATTTATT...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR CAA 90 bp | ACAAGAAACAAGATCAAGAACTCTGTTTTCAGCATCTTTACTCTTTaGGTAATGTGCAACAAGACCAGAGTGGCATTAAGAGCAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: TRNKIKNSVFSIFTL*VMCNKTRVALRAVS Trigger: GCTGACTGCTCTTAATGCCACTCTGGTCTTGTTGCACATTACCAAAAGAGTAAAGATGCTGAAAACAGAGTTCTTGATCTTGTTTCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR-3UTR TCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGGGTAGCTGTAGAGGATaGTTAAGTTTGCAAAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLGSCRG*LSLQSF Trigger: GAAACTTTGCAAACTTAATCATCCTCTACAGCTACC...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR-3UTR TCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGCCTCGGATAATTTTATaGTATCTGGTCTGTGAAACC | + |
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Preference number: 2 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLPRIIL*YLVCET Trigger: GGTTTCACAGACCAGATATCATAAAATTATCCGAGG...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR-3UTR GCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGACATTCTCCAGAAGATaGACATATTATACCGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLTFSRR*TYYTEY Trigger: ATACTCGGTATAATATGTGCATCTTCTGGAGAATGT...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 72 bp | ATCACCTGTAAGGCATGGATTGGTCCAAATGGAATCTaGGATGCCCAGGAAGCCTCCAGCAGGCAGATTGCT | + |
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Preference number: 3 (lower is better) Translates to: ITCKAWIGPNGI*DAQEASSRQIA Trigger: AGCAATCTGCCTGCTGGAGGCTTCCTGGGCATCTCAGATTCCATTTGGACCAATCCATGCCTTACAGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 72 bp | CTGGCAGAGATGCTCAGAGATTGGATAGAAGGGTACTaGCAACTGCTGGAAGAGACTCAGAGAAGGCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: LAEMLRDWIEGY*QLLEETQRRQS Trigger: GCTCTGCCTTCTCTGAGTCTCTTCCAGCAGTTGTCAGTACCCTTCTATCCAATCTCTGAGCATCTCTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 72 bp | CCCAGTCACTTCCTCCACATGCCTCGGATAATTTTATaGTATCTGGTCTGTGAAACCAGTGAACCCTCTATC | + |
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Preference number: 3 (lower is better) Translates to: PSHFLHMPRIIL*YLVCETSEPSI Trigger: GATAGAGGGTTCACTGGTTTCACAGACCAGATATCATAAAATTATCCGAGGCATGTGGAGGAAGTGACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 72 bp | TTCAGGTCATTGCACTGTTGGAAATTTGTCTTCAAGTaGACCCAGTCACTTCCTCCACATGCCTCGGATAAT | + |
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Preference number: 3 (lower is better) Translates to: FRSLHCWKFVFK*TQSLPPHASDN Trigger: ATTATCCGAGGCATGTGGAGGAAGTGACTGGGTTCACTTGAAGACAAATTTCCAACAGTGCAATGACCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR GCA 72 bp | AGGAGCTTAAAGATGGGTGGATTGAACCAGGCACCATaGCTAAAGACTAAGTTTGACACCAAAGCAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: RSLKMGGLNQAP*LKTKFDTKAKQ Trigger: TTGCTTTGCTTTGGTGTCAAACTTAGTCTTTAGGCATGGTGCCTGGTTCAATCCACCCATCTTTAAGCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 72 bp | CACATTCTCCAGAAGATGCACATATTATACCGAGTATaGAAGGAGCTTAAAGATGGGTGGATTGAACCAGGC | + |
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Preference number: 3 (lower is better) Translates to: HILQKMHILYRV*KELKDGWIEPG Trigger: GCCTGGTTCAATCCACCCATCTTTAAGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR-3UTR CAA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGATATCCTTTGTGATTTaGCCACCCGGCTTTATCACC | + |
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Preference number: 3 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLISFVI*PPGFIT Trigger: GGTGATAAAGCCGGGTGGCAAAATCACAAAGGATAT...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR GCA 72 bp | CATTTAAATTTAGTACTCTACACTAAATCCAGTCCTTaGCAAGCACTGTATCTGCCCCAACTGGTAATAGAA | + |
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Preference number: 3 (lower is better) Translates to: HLNLVLYTKSSP*QALYLPQLVIE Trigger: TTCTATTACCAGTTGGGGCAGATACAGTGCTTGGCAAGGACTGGATTTAGTGTAGAGTACTAAATTTAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR-3UTR CAA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGGTCTTTCTGCAAACCTaGAAATTTCACAATTGGATG | + |
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Preference number: 3 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLVFLQT*KFHNWM Trigger: CATCCAATTGTGAAATTTCAAGGTTTGCAGAAAGAC...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR TCA 72 bp | ATAGAAAATGAATTCCATACTCCAATCTCAGGAGAATaGGGTCTTTCTGCAAACCTTGAAATTTCACAATTG | + |
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Preference number: 3 (lower is better) Translates to: IENEFHTPISGE*GLSANLEISQL Trigger: CAATTGTGAAATTTCAAGGTTTGCAGAAAGACCTCATTCTCCTGAGATTGGAGTATGGAATTCATTTTCTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR GCA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGAGCTCGCAGCCAGCCTaGATGAAGCTAATGCAGTCG | + |
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Preference number: 4 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGSSQPA*MKLMQS Trigger: CGACTGCATTAGCTTCATGCAGGCTGGCTGCGAGCT...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR CCA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGCAGCCACATGAACCGTaGTGTGTTCTGGTTACCCTC | + |
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Preference number: 4 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGQPHEP*CVLVTL Trigger: GAGGGTAACCAGAACACACCACGGTTCATGTGGCTG...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR TCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACCCGTTTTCAGCCACATaGACCGTGGTGTGTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHPFSAT*TVVCSG Trigger: ACCAGAACACACCACGGTTCATGTGGCTGAAAACGG...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR TCA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGCCACATCCTCCATTTTaGAGAAACCAGCCAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGPHPPF*RNQPVW Trigger: CCACACTGGCTGGTTTCTTCAAAATGGAGGATGTGG...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR TCA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGAAACATAGGGGTCTATaGCATCCCCTTTGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGKHRGL*HPLWHR Trigger: CCTGTGCCAAAGGGGATGTCATAGACCCCTATGTTT...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR GCA 90 bp | GCTACAAATTCACTGTCCACAGCTTTTCTACCAAAAACCACATGCTTAGTAAACGCAGCGCGACCCCACTaGGACGGTCCCTCATCCGGC | + |
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Preference number: 4 (lower is better) Translates to: ATNSLSTAFLPKTTCLVNAARPH*DGPSSG Trigger: GCCGGATGAGGGACCGTCGCAGTGGGGTCGCGCTGC...GTTTACTAAGCATGTGGTTTTTGGTAGAAAAGCTGTGGACAGTGAATTTGTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR TCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACTCCCCAAGCAGAGAATaGGTGGGTACTCTGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHSPSRE*VGTLKQ Trigger: TTGCTTCAGAGTACCCACTCATTCTCTGCTTGGGGA...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR GCA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGGGTAAACCCATCAATTaGAAGGAAGCCTTTCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGGKPIN*KEAFLA Trigger: CGCCAGAAAGGCTTCCTTGCAATTGATGGGTTTACC...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR GCA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTCTTCCAAGCTGCGCTTaGCCTTGGCCTCTGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RTAHSPEDAHIIPSMKGALPSCA*PWPLSH Trigger: GTGGCTCAGAGGCCAAGGGCAAGCGCAGCTTGGAAG...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR CCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACCCACGGCTTCATTCTTaGCATTCTTCAGCAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHPRLHS*HSSAGL Trigger: GAGACCTGCTGAAGAATGCCAAGAATGAAGCCGTGG...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR GCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACACACTTCTGGCCTGGTaGACAGTTCGCAAAATGCTT | + |
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Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHTLLAW*TVRKML Trigger: AAGCATTTTGCGAACTGTGCACCAGGCCAGAAGTGT...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR GCA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGAATGGGATCGTATACTaGCCAATGAACTCATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGNGIVY*PMNSSP Trigger: TGGGGATGAGTTCATTGGGCAGTATACGATCCCATT...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR GCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCGCCAGCATCCTCTTCTaGACATCTGGAATGGCACCC | + |
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Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGASILF*TSGMAP Trigger: GGGTGCCATTCCAGATGTGCAGAAGAGGATGCTGGC...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR CCA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGAAGCTAATGCAGTCGTaGGCACTGCTAATCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGKLMQS*ALLIFF Trigger: GAAGAAGATTAGCAGTGCCCACGACTGCATTAGCTT...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR CCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACCCACATCTGCTGAATTaGCAACTAGGTCCAGAGACT | + |
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Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHPHLLN*QLGPET Trigger: AGTCTCTGGACCTAGTTGCCAATTCAGCAGATGTGG...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR CCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACCCCATTGATATCTGCTaGTCCCCTGAACTGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHPIDIC*SPELIF Trigger: GAAGATCAGTTCAGGGGACCAGCAGATATCAATGGG...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| 3UTR CAA 72 bp | TTTTGCCACCCGGCTTTATCACCTGTAAGGCATGGATaGGTCCAAATGGAATCTGAGATGCCCAGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: FCHPALSPVRHG*VQMESEMPRKP Trigger: AGGCTTCCTGGGCATCTCAGATTCCATTTGGACCAATCCATGCCTTACAGGTGATAAAGCCGGGTGGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR TCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCTCATCTGCTGTGCCATaGCTTTCTGCTGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGSSAVP*LSAEAE Trigger: CTCTGCCTCAGCAGAAAGTCATGGCACAGCAGATGA...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACGTGGAGGTCCATCATTaGACCGGGAGTTTGAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHVEVHH*TGSLKI Trigger: AATTTTCAAACTCCCGGTCCAATGATGGACCTCCAC...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCTTCATCGCCACAATCTaGCAGCCACAGTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGFIATI*QPQFQK Trigger: CTTCTGGAACTGTGGCTGTCAGATTGTGGCGATGAA...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCCTGATGATCTTGATGTaGAGAACCAGGGGAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGLMILM*RTRGDT Trigger: CGTGTCTCCCCTGGTTCTTCACATCAAGATCATCAG...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACATAAAATCAAGCGGTTaGTTACTACGAGAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHIKSSG*LLRETR Trigger: CCTGGTCTCTCGTAGTAAGCAACCGCTTGATTTTAT...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACAACACCTTTTTCATCTaGTGTGCCATGACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHNTFFI*CAMTFC Trigger: GCAGAAAGTCATGGCACAGCAGATGAAAAAGGTGTT...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGAATGCCCTTTGTATTTaGGCTGAAGTACGAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGNALCI*AEVRNF Trigger: GAAGTTTCGTACTTCAGCGCAAATACAAAGGGCATT...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTTGTCAGCCATTTCTATaGGGACCCGGCTCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTAHSPEDAHIIPSMKGACQPFL*GPGSLE Trigger: TTCAAGAGAGCCGGGTCCTCATAGAAATGGCTGACA...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGTTTCTCTCATATCTATaGCTTCTCGTAAGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGFLSYL*LLVRDE Trigger: TTCATCCCTTACGAGAAGCCATAGATATGAGAGAAA...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| 3UTR CAA 72 bp | CGGAGGGTAGAGGGATACTTTCAGGTCATTGCACTGTaGGAAATTTGTCTTCAAGTGAACCCAGTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRVEGYFQVIAL*EICLQVNPVTS Trigger: GGAAGTGACTGGGTTCACTTGAAGACAAATTTCCAACAGTGCAATGACCTGAAAGTATCCCTCTACCCTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTTGGGAGGTAGGATTCTaGAGACAAAGGTGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTAHSPEDAHIIPSMKGAWEVGF*RQRCFC Trigger: ACAGAAGCACCTTTGTCTTCAGAATCCTACCTCCCA...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACCTCTGTTTCACTAAATaGACACATTTCCCAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLREGRASAQHILQKMHLCFTK*THFPVV Trigger: AACTACTGGGAAATGTGTTCATTTAGTGAAACAGAG...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | GCTACAAATTCACTGTCCACAGCTTTTCTACCAAAAACCACATGCTTAGTAAACGGGTCACGTGCTCCATaGTATCCCCAACAAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATNSLSTAFLPKTTCLVNGSRAP*YPQQRS Trigger: GCTCCTTTGTTGGGGATATCATGGAGCACGTGACCC...GTTTACTAAGCATGTGGTTTTTGGTAGAAAAGCTGTGGACAGTGAATTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCTCCATCCCTGCTTTCTaGCACTGTACAATCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGSIPAF*HCTIFS Trigger: GGAAAAGATTGTACAGTGTCAGAAAGCAGGGATGGA...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCTTTGCCCCCAGATTATaGAGTTCCTCATGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGFAPRL*SSSWNS Trigger: GGAATTCCATGAGGAACTTCATAATCTGGGGGCAAA...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCCTTCGAAAGGAAAGGTaGATGGCCATGTTGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGLRKER*MAMLFL Trigger: TAGGAACAACATGGCCATGCACCTTTCCTTTCGAAG...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTATATCCTCAGTGATGTaGGTGACACCTTGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTAHSPEDAHIIPSMKGAISSVM*VTPCSA Trigger: AGCTGAGCAAGGTGTCACCCACATCACTGAGGATAT...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTACCTCTGGGTATTCATTaGCAATCCGGCTGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSANLEISQLDVPVTTVLPLGIH*QSGWPL Trigger: CAGAGGCCAGCCGGATTGCCAATGAATACCCAGAGG...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTCTTCTAAGAAGAGCATaGGGTCATTGGCATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFLLRRA*GHWHPG Trigger: ACCTGGATGCCAATGACCTCATGCTCTTCTTAGAAG...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTATACCCATTGATATCTaGTGGTCCCCTGAACTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RTAHSPEDAHIIPSMKGAIPIDI*WSPELI Trigger: GATCAGTTCAGGGGACCAGCAGATATCAATGGGTAT...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCACAGTTTTAGTTCTTTaGTCGCAGCAATCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGTVLVL*SQQSAG Trigger: TCCAGCTGATTGCTGCGAGCAAAGAACTAAAACTGT...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTTTTCAAGGTCTTTCTTaGAAGGTTCCCAGCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTAHSPEDAHIIPSMKGAFQGLS*KVPSVE Trigger: CTCTACGCTGGGAACCTTCCAAGAAAGACCTTGAAA...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCCTGCAGACATTCAAATaGGATCGTATACTGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGLQTFK*DRILPN Trigger: ATTGGGCAGTATACGATCCCATTTGAATGTCTGCAG...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| 3UTR CAA 72 bp | AGAGGGATACTTTCAGGTCATTGCACTGTTGGAAATTaGTCTTCAAGTGAACCCAGTCACTTCCTCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: RGILSGHCTVGN*SSSEPSHFLHM Trigger: CATGTGGAGGAAGTGACTGGGTTCACTTGAAGACAAATTTCCAACAGTGCAATGACCTGAAAGTATCCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCACCACATTTTTGGTTTaGAGGATCCTTGATGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGTTFLV*RILDDA Trigger: AGCATCATCAAGGATCCTTCAAACCAAAAATGTGGT...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCGCACAGTTCGCAAAATaGTTCACAAAATTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGAQFAK*FTKFLF Trigger: GAAGAGGAATTTTGTGAAGCATTTTGCGAACTGTGC...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTTGTGCTGAACAGATTTaGAGATGGATACCAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTAHSPEDAHIIPSMKGACAEQI*RWIPSQ Trigger: CTGACTTGGTATCCATCTGCAAATCTGTTCAGCACA...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTACAGGCCAGCTGGATTTaGTTTATGTTCTCCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSANLEISQLDVPVTTVLQASWI*FMFSTA Trigger: AGCCGTGGAGAACATAAAGCAAATCCAGCTGGCCTG...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTCAGTCTTCACAGATCTaGTCAGCAAGGCCATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFQSSQI*SARPLF Trigger: AAACAATGGCCTTGCTGACCAGATCTGTGAAGACTG...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTTCAAAATCCCTGTGCTaGACAGATTTGCAGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFSKSLC*TDLQMD Trigger: ATCCATCTGCAAATCTGTTCAGCACAGGGATTTTGA...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTCCTTTGTATTTGCGCTaGAGTACGAAACTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFPLYLR*STKLHL Trigger: GAGATGAAGTTTCGTACTTCAGCGCAAATACAAAGG...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCATTTCCATCAACATCTaGTGCTTCAAACACCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGISINI*CFKHRF Trigger: AAAACGGTGTTTGAAGCAGCAGATGTTGATGGAAAT...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | GCTACAAATTCACTGTCCACAGCTTTTCTACCAAAAACCACATGCTTAGTAAACATGTGGGTGACACCTTaGTCAGCTTCTAAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATNSLSTAFLPKTTCLVNMWVTP*SASKKS Trigger: GCTCTTCTTAGAAGCTGAGCAAGGTGTCACCCACAT...GTTTACTAAGCATGTGGTTTTTGGTAGAAAAGCTGTGGACAGTGAATTTGTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | GCTACAAATTCACTGTCCACAGCTTTTCTACCAAAAACCACATGCTTAGTAAACTTTCCCCATGGAGTATaGAGAAGGCACAGTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATNSLSTAFLPKTTCLVNFPHGV*RRHSLH Trigger: GTGAAGACTGTGCCTTCTCCATACTCCATGGGGAAA...GTTTACTAAGCATGTGGTTTTTGGTAGAAAAGCTGTGGACAGTGAATTTGTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTAAGTACACTTCTGGCCTaGTGCACAGTTCGCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LSANLEISQLDVPVTTVLSTLLA*CTVRKM Trigger: CATTTTGCGAACTGTGCACCAGGCCAGAAGTGTACT...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCGGAGACAATAAATACTaGGTAAACCCATCAATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGGDNKY*VNPSIA Trigger: TGCAATTGATGGGTTTACCCAGTATTTATTGTCTCC...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGAGAAACCAGCCAGTGTaGAGGTCCATCATTGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLRNQPV*RSIIGP Trigger: CGGTCCAATGATGGACCTCCACACTGGCTGGTTTCT...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| 3UTR CAA 72 bp | CTCCAATCTCAGGAGAATGAGGTCTTTCTGCAAACCTaGAAATTTCACAATTGGATGTTCCTGTCACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LQSQENEVFLQT*KFHNWMFLSQQ Trigger: CTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAGACCTCATTCTCCTGAGATTGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTACCGATGGCATGCTACTaGAAGACACTGTTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSANLEISQLDVPVTTVLPMACY*KTLFSF Trigger: GAAAGAAAACAGTGTCTTTCAGTAGCATGCCATCGG...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTAATCATCATCCAAAATaGCAAAACGGACCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFNHHPK*QNGPWS Trigger: TGACCATGGTCCGTTTTGTCATTTTGGATGATGATT...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTTCGTATACTGCCCAATaGACTCATCCCCAATATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFSYTAQ*THPQYN Trigger: ATTATATTGGGGATGAGTTCATTGGGCAGTATACGA...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTGACACTATGGCGTTCTaGATGTTTTCTCTCATATCT | + |
|
Preference number: 4 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFDTMAF*MFSLIS Trigger: AGATATGAGAGAAAACATGCAGAACGCCATAGTGTC...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTAGTGGGTTCAAATTACTaGAATCTATCCGCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSANLEISQLDVPVTTVLVGSNY*NLSAWH Trigger: GTGCCATGCGGATAGATTCCAGTAATTTGAACCCAC...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | GCTACAAATTCACTGTCCACAGCTTTTCTACCAAAAACCACATGCTTAGTAAACTCGGGAAGGTTGACTTaGAACTCGAAAGTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ATNSLSTAFLPKTTCLVNSGRLT*NSKVSS Trigger: TGATGAAACTTTCGAGTTTCAAGTCAACCTTCCCGA...GTTTACTAAGCATGTGGTTTTTGGTAGAAAAGCTGTGGACAGTGAATTTGTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | GCTACAAATTCACTGTCCACAGCTTTTCTACCAAAAACCACATGCTTAGTAAACTCCATCAACATCTGCTaGTTCAAACACCGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATNSLSTAFLPKTTCLVNSINIC*FKHRFQ Trigger: CTGAAAACGGTGTTTGAAGCAGCAGATGTTGATGGA...GTTTACTAAGCATGTGGTTTTTGGTAGAAAAGCTGTGGACAGTGAATTTGTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTAACAGCCCATCTTCAATaGTCTCACATACCCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSANLEISQLDVPVTTVLTAHLQ*SHIPID Trigger: ATCAATGGGTATGTGAGAGCATTGAAGATGGGCTGT...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTATCCTATTACAAAGGATaGGCTCATTATCCGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSANLEISQLDVPVTTVLSYYKG*AHYPDH Trigger: ATGGTCCGGATAATGAGCCCATCCTTTGTAATAGGA...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | GCTACAAATTCACTGTCCACAGCTTTTCTACCAAAAACCACATGCTTAGTAAACGAAAGGAAAGGTGCATaGCCATGTTGTTCCTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: ATNSLSTAFLPKTTCLVNERKGA*PCCSYY Trigger: GTAATAGGAACAACATGGCCATGCACCTTTCCTTTC...GTTTACTAAGCATGTGGTTTTTGGTAGAAAAGCTGTGGACAGTGAATTTGTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGATTGGACCGGGAGTTTaGAAATTCATCGCCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLIGPGV*KFIATI Trigger: GATTGTGGCGATGAATTTTCAAACTCCCGGTCCAAT...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGCTTTTTCATCTGCTGTaGCATGACTTTCTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLLFHLL*HDFLLR Trigger: CCTCAGCAGAAAGTCATGGCACAGCAGATGAAAAAG...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTAAACCGTGGTGTGTTCTaGTTACCCTCTATAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSANLEISQLDVPVTTVLNRGVF*LPSIKS Trigger: TGATTTTATAGAGGGTAACCAGAACACACCACGGTT...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGCTCCTCCACTGCGATTaGTTATTGCTATGTGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLLLHCD*LLLCER Trigger: TCGTTCACATAGCAATAACCAATCGCAGTGGAGGAG...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR GCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGGTTTTCCTCCTCCACTaGGATTGGTTATTGCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLVFLLH*DWLLLC Trigger: ACATAGCAATAACCAATCGCAGTGGAGGAGGAAAAC...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| 3UTR CAA 72 bp | AAGATCAAGAACTCTGTTTTCAGCATCTTTACTCTTTaGGTAATGTGCAACAAGACCAGAGTGGCATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KIKNSVFSIFTL*VMCNKTRVALR Trigger: TCTTAATGCCACTCTGGTCTTGTTGCACATTACCAAAAGAGTAAAGATGCTGAAAACAGAGTTCTTGATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR TCA 90 bp | GTAAAAACTGTGTTGCATGGATACCAAACACATTTGTCTGTCATTGTACTTTTGTGTACAATCTTTTCCTaGACTGTGTCAGCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKTVLHGYQTHLSVIVLLCTIFS*TVSAIS Trigger: AGAAATGGCTGACACAGTTCAGGAAAAGATTGTACA...CAAAAGTACAATGACAGACAAATGTGTTTGGTATCCATGCAACACAGTTTTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS TCA 90 bp | CTCTCGGCAGAGCCAGATATGTTTCTGCTCACCGTTGTAATCCCCTaGCATCCTCCGCGACATCTCGGCTTCTTCGTCCTCGTCGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSAEPDMFLLTVVIP*HPPRHLGFFVLVGH Trigger: GTGACCGACGAGGACGAAGAAGCCGAGATGTCGCGGAGGATGTCAGGGGATTACAACGGTGAGCAGAAACATATCTGGCTCTGCCGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 90 bp | TCTCCTCACTACTTTCTTTCTCCTCTATCGCTTCCAAGCTGCGCTTaGCCTTGGCCTCTGAGCCACCGCCAGGGCCTTTACTCAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPHYFLSPLSLPSCA*PWPLSHRQGLYSVH Trigger: GTGGACTGAGTAAAGGCCCTGGCGGTGGCTCAGAGGCCAAGGGCAAGCGCAGCTTGGAAGCGATAGAGGAGAAAGAAAGTAGTGAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 90 bp | TCCCGTTCTCCTCACTACTTTCTTTCTCCTCTATCGCTTCCAAGCTaGGCTTGCCCTTGGCCTCTGAGCCACCGCCAGGGCCTTTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSPHYFLSPLSLPS*ACPWPLSHRQGLYS Trigger: TGAGTAAAGGCCCTGGCGGTGGCTCAGAGGCCAAGGGCAAGCGCAGCTTGGAAGCGATAGAGGAGAAAGAAAGTAGTGAGGAGAACGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 90 bp | GTCACGTGCTCCATGATATCCCCAACAAAGGAGCGCAAGGGAACGTaGCGGTACCCGGGCTGCAGACATTCAAATGGGATCGTATACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VTCSMISPTKERKGT*RYPGCRHSNGIVYC Trigger: GCAGTATACGATCCCATTTGAATGTCTGCAGCCCGGGTACCGGCACGTTCCCTTGCGCTCCTTTGTTGGGGATATCATGGAGCACGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 90 bp | CACTACTTTCTTTCTCCTCTATCGCTTCCAAGCTGCGCTTGCCCTTaGCCTCTGAGCCACCGCCAGGGCCTTTACTCAGTCCACAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: HYFLSPLSLPSCACP*PLSHRQGLYSVHKT Trigger: TGTCTTGTGGACTGAGTAAAGGCCCTGGCGGTGGCTCAGAGGCCAAGGGCAAGCGCAGCTTGGAAGCGATAGAGGAGAAAGAAAGTAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS TCA 90 bp | TGCGATTGGTTATTGCTATGTGAACGAAAAGGGTCACGTGCTCCATaGTATCCCCAACAAAGGAGCGCAAGGGAACGTGCCGGTACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CDWLLLCERKGSRAP*YPQQRSARERAGTR Trigger: CCGGGTACCGGCACGTTCCCTTGCGCTCCTTTGTTGGGGATATCATGGAGCACGTGACCCTTTTCGTTCACATAGCAATAACCAATCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 90 bp | ATATCCCCAACAAAGGAGCGCAAGGGAACGTGCCGGTACCCGGGCTaGAGACATTCAAATGGGATCGTATACTGCCCAATGAACTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ISPTKERKGTCRYPG*RHSNGIVYCPMNSS Trigger: GGATGAGTTCATTGGGCAGTATACGATCCCATTTGAATGTCTGCAGCCCGGGTACCGGCACGTTCCCTTGCGCTCCTTTGTTGGGGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACGCAGGCCAGCTGGATTaGCTTTATGTTCTCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRLREGRASAQHILQKMHAGQLD*LYVLHG Trigger: GCCGTGGAGAACATAAAGCAAATCCAGCTGGCCTGC...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCGCTTCCAAGCTGCGCTaGCCCTTGGCCTCTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGASKLR*PLASEP Trigger: TGGCTCAGAGGCCAAGGGCAAGCGCAGCTTGGAAGC...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS TCA 90 bp | TCTTGGAAGGTTCCCAGCGTAGAGCCTGGAGGTCGGTATCTAGGGTaGAAAATCGGTTGTAGATGCGAGAGTTCGGGCGCACTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWKVPSVEPGGRYLG*KIGCRCESSGALSS Trigger: TGAAGAAAGTGCGCCCGAACTCTCGCATCTACAACCGATTTTTCACCCTAGATACCGACCTCCAGGCTCTACGCTGGGAACCTTCCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 90 bp | CCACCGCCAGGGCCTTTACTCAGTCCACAAGACAAGCAGGCCAGCTaGATTTGCTTTATGTTCTCCACGGCTTCATTCTTGGCATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPPGPLLSPQDKQAS*ICFMFSTASFLAFF Trigger: GAAGAATGCCAAGAATGAAGCCGTGGAGAACATAAAGCAAATCCAGCTGGCCTGCTTGTCTTGTGGACTGAGTAAAGGCCCTGGCGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 90 bp | GTGAAGAACCAGGGGAGACACGCCAGGGACAATGCCCTTTGTATTTaGGCTGAAGTACGAAACTTCATCTCGCATGATAGATGGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VKNQGRHARDNALCI*AEVRNFISHDRWPE Trigger: CTCAGGCCATCTATCATGCGAGATGAAGTTTCGTACTTCAGCGCAAATACAAAGGGCATTGTCCCTGGCGTGTCTCCCCTGGTTCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 90 bp | CCAGGGCCTTTACTCAGTCCACAAGACAAGCAGGCCAGCTGGATTTaGTTTATGTTCTCCACGGCTTCATTCTTGGCATTCTTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPLLSPQDKQASWI*FMFSTASFLAFFSR Trigger: CCTGCTGAAGAATGCCAAGAATGAAGCCGTGGAGAACATAAAGCAAATCCAGCTGGCCTGCTTGTCTTGTGGACTGAGTAAAGGCCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 90 bp | TCATCAGATCATATGCAGCCAGCATCCTCTTCTGCACATCTGGAATaGCACCCAGAGGCTCCAGGTAAGGAAAGCAGTCCTTCATCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSDHMQPASSSAHLE*HPEAPGKESSPSSP Trigger: TGGTGATGAAGGACTGCTTTCCTTACCTGGAGCCTCTGGGTGCCATTCCAGATGTGCAGAAGAGGATGCTGGCTGCATATGATCTGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGTGGTCAGCAAGGCCATaGTTTCTGAATGTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGWSARP*FLNVSV Trigger: CACAGAGACATTCAGAAACAATGGCCTTGCTGACCA...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 90 bp | ATGAACCGTGGTGTGTTCTGGTTACCCTCTATAAAATCAAGCGGTTaGTTACTACGAGAGACCAGGTACCGTAACCCCGACACCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: MNRGVFWLPSIKSSG*LLRETRYRNPDTQM Trigger: CATCTGGGTGTCGGGGTTACGGTACCTGGTCTCTCGTAGTAAGCAACCGCTTGATTTTATAGAGGGTAACCAGAACACACCACGGTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTTCACTATCCCTCTCTCAGCAGGGTAAGAGGAACGGAGGGTAGAGGGTTTTCAAGGTCTTTCTaGGAAGGTTCCCAGCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLLHYPSLSRVRGTEGRGFSRSF*EGSQRR Trigger: TCTACGCTGGGAACCTTCCAAGAAAGACCTTGAAAA...CCCTCTACCCTCCGTTCCTCTTACCCTGCTGAGAGAGGGATAGTGAAGAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | AAGAGACTCAGAGAAGGCAGAGCAAGCGCACAGCACATTCTCCAGAAGATGCACCTCGGGAAGGTTGACTaGAAACTCGAAAGTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KRLREGRASAQHILQKMHLGKVD*KLESFI Trigger: GATGAAACTTTCGAGTTTCAAGTCAACCTTCCCGAG...GTGCATCTTCTGGAGAATGTGCTGTGCGCTTGCTCTGCCTTCTCTGAGTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS GCA 90 bp | ACCATCACTCACATCGAGCTCAATGCTTCTACAGCCCATCTTCAATaGTCTCACATACCCATTGATATCTGCTGGTCCCCTGAACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: TITHIELNASTAHLQ*SHIPIDICWSPELI Trigger: GATCAGTTCAGGGGACCAGCAGATATCAATGGGTATGTGAGAGCATTGAAGATGGGCTGTAGAAGCATTGAGCTCGATGTGAGTGATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 90 bp | AATTGGCAACTAGGTCCAGAGACTCGTAATTTTCCCCATGGAGTATaGAGAAGGCACAGTCTTCACAGATCTGGTCAGCAAGGCCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: NWQLGPETRNFPHGV*RRHSLHRSGQQGHC Trigger: ACAATGGCCTTGCTGACCAGATCTGTGAAGACTGTGCCTTCTCCATACTCCATGGGGAAAATTACGAGTCTCTGGACCTAGTTGCCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 90 bp | GCTGCTTCAAACACCGTTTTCAGCCACATGAACCGTGGTGTGTTCTaGTTACCCTCTATAAAATCAAGCGGTTGCTTACTACGAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: AASNTVFSHMNRGVF*LPSIKSSGCLLRET Trigger: GGTCTCTCGTAGTAAGCAACCGCTTGATTTTATAGAGGGTAACCAGAACACACCACGGTTCATGTGGCTGAAAACGGTGTTTGAAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTCCCAGCCTGATCTCTTaGATGGCAGAAATGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTAHSPEDAHIIPSMKGAPSLIS*MAEMSS Trigger: GCTGGACATTTCTGCCATCAAAGAGATCAGGCTGGG...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTGCTCTCACATACCCATaGATATCTGCTGGTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTAHSPEDAHIIPSMKGAALTYP*ISAGPL Trigger: CAGGGGACCAGCAGATATCAATGGGTATGTGAGAGC...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 90 bp | TGCTTCTGTATAAAGTTTCTCGCCAAACACCTTTTTCATCTGCTGTaGCATGACTTTCTGCTGAGGCAGAGAGCAGTGATTCCCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CFCIKFLAKHLFHLL*HDFLLRQRAVIPQA Trigger: TGCTTGGGGAATCACTGCTCTCTGCCTCAGCAGAAAGTCATGGCACAGCAGATGAAAAAGGTGTTTGGCGAGAAACTTTATACAGAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 90 bp | CTTTGTATTTGCGCTGAAGTACGAAACTTCATCTCGCATGATAGATaGCCTGAGGACGTAGCCACATCCTCCATTTTGAAGAAACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCICAEVRNFISHDR*PEDVATSSILKKPA Trigger: GGCTGGTTTCTTCAAAATGGAGGATGTGGCTACGTCCTCAGGCCATCTATCATGCGAGATGAAGTTTCGTACTTCAGCGCAAATACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTGCCACATCCTCCATTTaGAAGAAACCAGCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTAHSPEDAHIIPSMKGAATSSI*KKPASV Trigger: CACACTGGCTGGTTTCTTCAAAATGGAGGATGTGGC...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCCCTTCAAGCCTTCCTTaGCCCCCAGATTATGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGPSSLP*PPDYEV Trigger: AACTTCATAATCTGGGGGCAAAGGAAGGCTTGAAGG...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTTCCACGGCTTCATTCTaGGCATTCTTCAGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTAHSPEDAHIIPSMKGASTASF*AFFSRS Trigger: AGACCTGCTGAAGAATGCCAAGAATGAAGCCGTGGA...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS TCA 90 bp | TCTGACACTGTACAATCTTTTCCTGAACTGTGTCAGCCATTTCTATaGGGACCCGGCTCTCTTGAATCATCAGATCATATGCAGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDTVQSFPELCQPFL*GPGSLESSDHMQPA Trigger: TGCTGGCTGCATATGATCTGATGATTCAAGAGAGCCGGGTCCTCATAGAAATGGCTGACACAGTTCAGGAAAAGATTGTACAGTGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 90 bp | CTAATGATGTCTAAACACATATCCTCAGTGATGTGGGTGACACCTTaGTCAGCTTCTAAGAAGAGCATGAGGTCATTGGCATCCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LMMSKHISSVMWVTP*SASKKSMRSLASRY Trigger: GTACCTGGATGCCAATGACCTCATGCTCTTCTTAGAAGCTGAGCAAGGTGTCACCCACATCACTGAGGATATGTGTTTAGACATCATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 90 bp | AGCATGAGGTCATTGGCATCCAGGTACTCTTTGTTCTTAGATATCTaGACAAGTAAGAAGTACACTTCTGGCCTGGTGCACAGTTCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SMRSLASRYSLFLDI*TSKKYTSGLVHSSQ Trigger: TTGCGAACTGTGCACCAGGCCAGAAGTGTACTTCTTACTTGTCCAGATATCTAAGAACAAAGAGTACCTGGATGCCAATGACCTCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | GCTACAAATTCACTGTCCACAGCTTTTCTACCAAAAACCACATGCTTAGTAAACTCCTCTGGGTATTCATaGGCAATCCGGCTGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ATNSLSTAFLPKTTCLVNSSGYS*AIRLAS Trigger: AGAGGCCAGCCGGATTGCCAATGAATACCCAGAGGA...GTTTACTAAGCATGTGGTTTTTGGTAGAAAAGCTGTGGACAGTGAATTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | GCTACAAATTCACTGTCCACAGCTTTTCTACCAAAAACCACATGCTTAGTAAACTCTATGACATCCCCTTaGGCACAGGCTCCTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATNSLSTAFLPKTTCLVNSMTSP*AQAPLG Trigger: GCCCAAAGGAGCCTGTGCCAAAGGGGATGTCATAGA...GTTTACTAAGCATGTGGTTTTTGGTAGAAAAGCTGTGGACAGTGAATTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | ACAGTGCTAGTTACAACAGGGCATTTAGTGTGTTTCAAAGTACTGCCCAGTGGCCTCTCAATGGCCTTGTaGAGTTTTCTTCCCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVLVTTGHLVCFKVLPSGLSMAL*SFLPFK Trigger: CTTGAAGGGAAGAAAACTCAACAAGGCCATTGAGAG...GCCACTGGGCAGTACTTTGAAACACACTAAATGCCCTGTTGTAACTAGCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | CGCACAGCACATTCTCCAGAAGATGCACATATTATACCGAGTATGAAAGGAGCTCTTCAGCAGGTCTCCTaGTCCCTTCAATACCGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RTAHSPEDAHIIPSMKGALQQVS*SLQYRN Trigger: ATTACGGTATTGAAGGGACAAGGAGACCTGCTGAAG...AGCTCCTTTCATACTCGGTATAATATGTGCATCTTCTGGAGAATGTGCTGTGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 90 bp | ATCAACATCTGCTGCTTCAAACACCGTTTTCAGCCACATGAACCGTaGTGTGTTCTGGTTACCCTCTATAAAATCAAGCGGTTGCTTACT | + |
|
Preference number: 5 (lower is better) Translates to: INICCFKHRFQPHEP*CVLVTLYKIKRLLT Trigger: AGTAAGCAACCGCTTGATTTTATAGAGGGTAACCAGAACACACCACGGTTCATGTGGCTGAAAACGGTGTTTGAAGCAGCAGATGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTAGCCACATCTGCTGAATaGGCAACTAGGTCCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSANLEISQLDVPVTTVLATSAE*ATRSRD Trigger: GTCTCTGGACCTAGTTGCCAATTCAGCAGATGTGGC...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTTGTGGAGGTCCATCATaGGACCGGGAGTTTGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFCGGPS*DREFEN Trigger: ATTTTCAAACTCCCGGTCCAATGATGGACCTCCACA...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 90 bp | AGCTCATATCTCCTAATGATGTCTAAACACATATCCTCAGTGATGTaGGTGACACCTTGCTCAGCTTCTAAGAAGAGCATGAGGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SSYLLMMSKHISSVM*VTPCSASKKSMRSL Trigger: CAATGACCTCATGCTCTTCTTAGAAGCTGAGCAAGGTGTCACCCACATCACTGAGGATATGTGTTTAGACATCATTAGGAGATATGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS-3UTR CAA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTTACAGTTTTAGTTCTTaGCTCGCAGCAATCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFYSFSS*LAAISW Trigger: CCAGCTGATTGCTGCGAGCAAAGAACTAAAACTGTA...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTAAGCTCTCAATGGCCTaGTTGAGTTTTCTTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFKLSMA*LSFLPF Trigger: GAAGGGAAGAAAACTCAACAAGGCCATTGAGAGCTT...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 90 bp | GACAATAAATACTGGGTAAACCCATCAATTGCAAGGAAGCCTTTCTaGCGGCCATCTTCAGAGAGCTCATATCTCCTAATGATGTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: DNKYWVNPSIARKPF*RPSSESSYLLMMSK Trigger: TTTAGACATCATTAGGAGATATGAGCTCTCTGAAGATGGCCGCCAGAAAGGCTTCCTTGCAATTGATGGGTTTACCCAGTATTTATTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 90 bp | TTTTGCTCTGGATCAAAAATGTCACATTCTGGAGACAATAAATACTaGGTAAACCCATCAATTGCAAGGAAGCCTTTCTGGCGGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FCSGSKMSHSGDNKY*VNPSIARKPFWRPS Trigger: AGATGGCCGCCAGAAAGGCTTCCTTGCAATTGATGGGTTTACCCAGTATTTATTGTCTCCAGAATGTGACATTTTTGATCCAGAGCAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTGTTTCAAAGTACTGCCCAGTGGCTACAAATTCACTGTCCACAGCTTTTATAAAATCAAGCGGTaGCTTACTACGAGAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVCFKVLPSGYKFTVHSFYKIKR*LTTRDQ Trigger: CTGGTCTCTCGTAGTAAGCAACCGCTTGATTTTATA...AAAGCTGTGGACAGTGAATTTGTAGCCACTGGGCAGTACTTTGAAACACACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTAAAGAGCATGAGGTCATaGGCATCCAGGTACTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSANLEISQLDVPVTTVLKSMRS*ASRYSL Trigger: CAAAGAGTACCTGGATGCCAATGACCTCATGCTCTT...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS-3UTR CAA 90 bp | CTTTCTGCAAACCTTGAAATTTCACAATTGGATGTTCCTGTCACAACAGTGCTAGCATCCAGGTACTCTTaGTTCTTAGATATCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSANLEISQLDVPVTTVLASRYS*FLDIWT Trigger: TGTCCAGATATCTAAGAACAAAGAGTACCTGGATGC...TAGCACTGTTGTGACAGGAACATCCAATTGTGAAATTTCAAGGTTTGCAGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 72 bp | CTTTCTCCTCTATCGCTTCCAAGCTGCGCTTGCCCTTaGCCTCTGAGCCACCGCCAGGGCCTTTACTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSPLSLPSCACP*PLSHRQGLYSV Trigger: GACTGAGTAAAGGCCCTGGCGGTGGCTCAGAGGCCAAGGGCAAGCGCAGCTTGGAAGCGATAGAGGAGAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 72 bp | GAGTTCGGGCGCACTTTCTTCAGCTCGCAGCCAGCCTaGATGAAGCTAATGCAGTCGTGGGCACTGCTAATC | + |
|
Preference number: 6 (lower is better) Translates to: EFGRTFFSSQPA*MKLMQSWALLI Trigger: GATTAGCAGTGCCCACGACTGCATTAGCTTCATGCAGGCTGGCTGCGAGCTGAAGAAAGTGCGCCCGAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 72 bp | TACTTTCTTTCTCCTCTATCGCTTCCAAGCTGCGCTTaGCCTTGGCCTCTGAGCCACCGCCAGGGCCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: YFLSPLSLPSCA*PWPLSHRQGLY Trigger: GTAAAGGCCCTGGCGGTGGCTCAGAGGCCAAGGGCAAGCGCAGCTTGGAAGCGATAGAGGAGAAAGAAAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CAA 90 bp | TTCTCCTCACTACTTTCTTTCTCCTCTATCGCTTCCAAGCTGCGCTaGCCCTTGGCCTCTGAGCCACCGCCAGGGCCTTTACTCAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSSLLSFSSIASKLR*PLASEPPPGPLLSP Trigger: TGGACTGAGTAAAGGCCCTGGCGGTGGCTCAGAGGCCAAGGGCAAGCGCAGCTTGGAAGCGATAGAGGAGAAAGAAAGTAGTGAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS GCA 72 bp | ACAAAGGAGCGCAAGGGAACGTGCCGGTACCCGGGCTaGAGACATTCAAATGGGATCGTATACTGCCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: TKERKGTCRYPG*RHSNGIVYCPM Trigger: CATTGGGCAGTATACGATCCCATTTGAATGTCTGCAGCCCGGGTACCGGCACGTTCCCTTGCGCTCCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 72 bp | TCCATGATATCCCCAACAAAGGAGCGCAAGGGAACGTaGCGGTACCCGGGCTGCAGACATTCAAATGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SMISPTKERKGT*RYPGCRHSNGI Trigger: GATCCCATTTGAATGTCTGCAGCCCGGGTACCGGCACGTTCCCTTGCGCTCCTTTGTTGGGGATATCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS TCA 72 bp | GAGCCAGATATGTTTCTGCTCACCGTTGTAATCCCCTaGCATCCTCCGCGACATCTCGGCTTCTTCGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EPDMFLLTVVIP*HPPRHLGFFVL Trigger: GAGGACGAAGAAGCCGAGATGTCGCGGAGGATGTCAGGGGATTACAACGGTGAGCAGAAACATATCTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CAA 90 bp | TCTTTGATGGCAGAAATGTCCAGCTTGGCTTTTTCAAGGTCTTTCTaGGAAGGTTCCCAGCGTAGAGCCTGGAGGTCGGTATCTAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLMAEMSSLAFSRSF*EGSQRRAWRSVSRV Trigger: CACCCTAGATACCGACCTCCAGGCTCTACGCTGGGAACCTTCCAAGAAAGACCTTGAAAAAGCCAAGCTGGACATTTCTGCCATCAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 72 bp | GGTGTGTTCTGGTTACCCTCTATAAAATCAAGCGGTTaGTTACTACGAGAGACCAGGTACCGTAACCCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: GVFWLPSIKSSG*LLRETRYRNPD Trigger: GTCGGGGTTACGGTACCTGGTCTCTCGTAGTAAGCAACCGCTTGATTTTATAGAGGGTAACCAGAACACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS GCA 72 bp | CAGGGGAGACACGCCAGGGACAATGCCCTTTGTATTTaGGCTGAAGTACGAAACTTCATCTCGCATGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: QGRHARDNALCI*AEVRNFISHDR Trigger: TCTATCATGCGAGATGAAGTTTCGTACTTCAGCGCAAATACAAAGGGCATTGTCCCTGGCGTGTCTCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 72 bp | CAGAAATGTCCAGCTTGGCTTTTTCAAGGTCTTTCTTaGAAGGTTCCCAGCGTAGAGCCTGGAGGTCGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: QKCPAWLFQGLS*KVPSVEPGGRY Trigger: ATACCGACCTCCAGGCTCTACGCTGGGAACCTTCCAAGAAAGACCTTGAAAAAGCCAAGCTGGACATTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 72 bp | GGGCCTTTACTCAGTCCACAAGACAAGCAGGCCAGCTaGATTTGCTTTATGTTCTCCACGGCTTCATTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GPLLSPQDKQAS*ICFMFSTASFL Trigger: CAAGAATGAAGCCGTGGAGAACATAAAGCAAATCCAGCTGGCCTGCTTGTCTTGTGGACTGAGTAAAGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS TCA 72 bp | ACTGTGTCAGCCATTTCTATGAGGACCCGGCTCTCTTaGATCATCAGATCATATGCAGCCAGCATCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TVSAISMRTRLS*IIRSYAASILF Trigger: GAAGAGGATGCTGGCTGCATATGATCTGATGATTCAAGAGAGCCGGGTCCTCATAGAAATGGCTGACACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS GCA 72 bp | CACATCGAGCTCAATGCTTCTACAGCCCATCTTCAATaGTCTCACATACCCATTGATATCTGCTGGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HIELNASTAHLQ*SHIPIDICWSP Trigger: AGGGGACCAGCAGATATCAATGGGTATGTGAGAGCATTGAAGATGGGCTGTAGAAGCATTGAGCTCGATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS GCA 72 bp | GCTCATTATCCGGACCATCACTCACATCGAGCTCAATaGTTCTACAGCCCATCTTCAATGCTCTCACATACC | + |
|
Preference number: 6 (lower is better) Translates to: AHYPDHHSHRAQ*FYSPSSMLSHT Trigger: GGTATGTGAGAGCATTGAAGATGGGCTGTAGAAGCATTGAGCTCGATGTGAGTGATGGTCCGGATAATGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 72 bp | CTAGGTCCAGAGACTCGTAATTTTCCCCATGGAGTATaGAGAAGGCACAGTCTTCACAGATCTGGTCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LGPETRNFPHGV*RRHSLHRSGQQ Trigger: TTGCTGACCAGATCTGTGAAGACTGTGCCTTCTCCATACTCCATGGGGAAAATTACGAGTCTCTGGACCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 72 bp | TGCGCTGAAGTACGAAACTTCATCTCGCATGATAGATaGCCTGAGGACGTAGCCACATCCTCCATTTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CAEVRNFISHDR*PEDVATSSILK Trigger: CTTCAAAATGGAGGATGTGGCTACGTCCTCAGGCCATCTATCATGCGAGATGAAGTTTCGTACTTCAGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CAA 90 bp | AGTATGGAGAAGGCACAGTCTTCACAGATCTGGTCAGCAAGGCCATaGTTTCTGAATGTCTCTGTGTTCTTCCCCAGCCTGATCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SMEKAQSSQIWSARP*FLNVSVFFPSLISL Trigger: CAAAGAGATCAGGCTGGGGAAGAACACAGAGACATTCAGAAACAATGGCCTTGCTGACCAGATCTGTGAAGACTGTGCCTTCTCCATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CAA 90 bp | TATGTTCTCCACGGCTTCATTCTTGGCATTCTTCAGCAGGTCTCCTaGTCCCTTCAATACCGTAATATTCCAAGCGAAGCTCTCAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: YVLHGFILGILQQVS*SLQYRNIPSEALNG Trigger: GCCATTGAGAGCTTCGCTTGGAATATTACGGTATTGAAGGGACAAGGAGACCTGCTGAAGAATGCCAAGAATGAAGCCGTGGAGAACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CAA 90 bp | AAGCAGGCCAGCTGGATTTGCTTTATGTTCTCCACGGCTTCATTCTaGGCATTCTTCAGCAGGTCTCCTTGTCCCTTCAATACCGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: KQASWICFMFSTASF*AFFSRSPCPFNTVI Trigger: TATTACGGTATTGAAGGGACAAGGAGACCTGCTGAAGAATGCCAAGAATGAAGCCGTGGAGAACATAAAGCAAATCCAGCTGGCCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS GCA 72 bp | CTTCTGTGGTTTTCCTCCTCCACTGCGATTGGTTATTaGTATGTGAACGAAAAGGGTCACGTGCTCCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLWFSSSTAIGY*YVNEKGHVLHD Trigger: ATCATGGAGCACGTGACCCTTTTCGTTCACATAGCAATAACCAATCGCAGTGGAGGAGGAAAACCACAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS GCA 72 bp | TTACTCAGTCCACAAGACAAGCAGGCCAGCTGGATTTaGTTTATGTTCTCCACGGCTTCATTCTTGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSPQDKQASWI*FMFSTASFLAF Trigger: GAATGCCAAGAATGAAGCCGTGGAGAACATAAAGCAAATCCAGCTGGCCTGCTTGTCTTGTGGACTGAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 72 bp | TACTGGGTAAACCCATCAATTGCAAGGAAGCCTTTCTaGCGGCCATCTTCAGAGAGCTCATATCTCCTAATG | + |
|
Preference number: 6 (lower is better) Translates to: YWVNPSIARKPF*RPSSESSYLLM Trigger: CATTAGGAGATATGAGCTCTCTGAAGATGGCCGCCAGAAAGGCTTCCTTGCAATTGATGGGTTTACCCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CAA 72 bp | AACTGTGTCAGCCATTTCTATGAGGACCCGGCTCTCTaGAATCATCAGATCATATGCAGCCAGCATCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: NCVSHFYEDPAL*NHQIICSQHPL Trigger: AAGAGGATGCTGGCTGCATATGATCTGATGATTCAAGAGAGCCGGGTCCTCATAGAAATGGCTGACACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CAA 72 bp | CACGGCTTCATTCTTGGCATTCTTCAGCAGGTCTCCTaGTCCCTTCAATACCGTAATATTCCAAGCGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HGFILGILQQVS*SLQYRNIPSEA Trigger: AGCTTCGCTTGGAATATTACGGTATTGAAGGGACAAGGAGACCTGCTGAAGAATGCCAAGAATGAAGCCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS TCA 72 bp | GCAGTGATTCCCCAAGCAGAGAATGAGTGGGTACTCTaGAGCAACAAAGGCAAACTTATTTATCACCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVIPQAENEWVL*SNKGKLIYHLQ Trigger: CTGGAGGTGATAAATAAGTTTGCCTTTGTTGCTTCAGAGTACCCACTCATTCTCTGCTTGGGGAATCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CAA 72 bp | AGCTGGATTTGCTTTATGTTCTCCACGGCTTCATTCTaGGCATTCTTCAGCAGGTCTCCTTGTCCCTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SWICFMFSTASF*AFFSRSPCPFN Trigger: ATTGAAGGGACAAGGAGACCTGCTGAAGAATGCCAAGAATGAAGCCGTGGAGAACATAAAGCAAATCCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CAA 90 bp | ATGTGGGTGACACCTTGCTCAGCTTCTAAGAAGAGCATGAGGTCATaGGCATCCAGGTACTCTTTGTTCTTAGATATCTGGACAAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: MWVTPCSASKKSMRS*ASRYSLFLDIWTSK Trigger: CTTACTTGTCCAGATATCTAAGAACAAAGAGTACCTGGATGCCAATGACCTCATGCTCTTCTTAGAAGCTGAGCAAGGTGTCACCCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS GCA 72 bp | ATAAAGTTTCTCGCCAAACACCTTTTTCATCTGCTGTaGCATGACTTTCTGCTGAGGCAGAGAGCAGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: IKFLAKHLFHLL*HDFLLRQRAVI Trigger: AATCACTGCTCTCTGCCTCAGCAGAAAGTCATGGCACAGCAGATGAAAAAGGTGTTTGGCGAGAAACTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 72 bp | AACACCGTTTTCAGCCACATGAACCGTGGTGTGTTCTaGTTACCCTCTATAAAATCAAGCGGTTGCTTACTA | + |
|
Preference number: 6 (lower is better) Translates to: NTVFSHMNRGVF*LPSIKSSGCLL Trigger: TAGTAAGCAACCGCTTGATTTTATAGAGGGTAACCAGAACACACCACGGTTCATGTGGCTGAAAACGGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 72 bp | TCATTGGCATCCAGGTACTCTTTGTTCTTAGATATCTaGACAAGTAAGAAGTACACTTCTGGCCTGGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLASRYSLFLDI*TSKKYTSGLVH Trigger: GTGCACCAGGCCAGAAGTGTACTTCTTACTTGTCCAGATATCTAAGAACAAAGAGTACCTGGATGCCAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 72 bp | TTATCACCTCCAGAACACTTCGAAAGGAAAGGTGCATaGCCATGTTGTTCCTATTACAAAGGATGGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LSPPEHFERKGA*PCCSYYKGWAH Trigger: ATGAGCCCATCCTTTGTAATAGGAACAACATGGCCATGCACCTTTCCTTTCGAAGTGTTCTGGAGGTGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CCA 72 bp | TTGTACAGTTTTAGTTCTTTGCTCGCAGCAATCAGCTaGAATTCCGTGAATCTCCACACAAACATAGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LYSFSSLLAAIS*NSVNLHTNIGV Trigger: GACCCCTATGTTTGTGTGGAGATTCACGGAATTCCAGCTGATTGCTGCGAGCAAAGAACTAAAACTGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS CAA 72 bp | ACACCTTGCTCAGCTTCTAAGAAGAGCATGAGGTCATaGGCATCCAGGTACTCTTTGTTCTTAGATATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TPCSASKKSMRS*ASRYSLFLDIW Trigger: CCAGATATCTAAGAACAAAGAGTACCTGGATGCCAATGACCTCATGCTCTTCTTAGAAGCTGAGCAAGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS TCA 72 bp | GTACAATCTTTTCCTGAACTGTGTCAGCCATTTCTATaGGGACCCGGCTCTCTTGAATCATCAGATCATATG | + |
|
Preference number: 6 (lower is better) Translates to: VQSFPELCQPFL*GPGSLESSDHM Trigger: CATATGATCTGATGATTCAAGAGAGCCGGGTCCTCATAGAAATGGCTGACACAGTTCAGGAAAAGATTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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| CDS GCA 72 bp | TTATTTATCACCTCCAGAACACTTCGAAAGGAAAGGTaGATGGCCATGTTGTTCCTATTACAAAGGATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LFITSRTLRKER*MAMLFLLQRMG Trigger: GCCCATCCTTTGTAATAGGAACAACATGGCCATGCACCTTTCCTTTCGAAGTGTTCTGGAGGTGATAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 72 bp | CATCTTCAATGCTCTCACATACCCATTGATATCTGCTaGTCCCCTGAACTGATCTTCTATCAGGTAGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: HLQCSHIPIDIC*SPELIFYQVGI Trigger: AATACCTACCTGATAGAAGATCAGTTCAGGGGACCAGCAGATATCAATGGGTATGTGAGAGCATTGAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CAA 72 bp | TGGATTATCGCTGTTCTGTTGTACAGTTTTAGTTCTTaGCTCGCAGCAATCAGCTGGAATTCCGTGAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: WIIAVLLYSFSS*LAAISWNSVNL Trigger: GAGATTCACGGAATTCCAGCTGATTGCTGCGAGCAAAGAACTAAAACTGTACAACAGAACAGCGATAATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS GCA 72 bp | ATATCTGGACAAGTAAGAAGTACACTTCTGGCCTGGTaGACAGTTCGCAAAATGCTTCACAAAATTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ISGQVRSTLLAW*TVRKMLHKIPL Trigger: AAGAGGAATTTTGTGAAGCATTTTGCGAACTGTGCACCAGGCCAGAAGTGTACTTCTTACTTGTCCAGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CAA 90 bp | ATCAAAAATTGGATTATCGCTGTTCTGTTGTACAGTTTTAGTTCTTaGCTCGCAGCAATCAGCTGGAATTCCGTGAATCTCCACACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IKNWIIAVLLYSFSS*LAAISWNSVNLHTN Trigger: GTTTGTGTGGAGATTCACGGAATTCCAGCTGATTGCTGCGAGCAAAGAACTAAAACTGTACAACAGAACAGCGATAATCCAATTTTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
||
| CDS CCA 72 bp | GGATCAAAAATGTCACATTCTGGAGACAATAAATACTaGGTAAACCCATCAATTGCAAGGAAGCCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSKMSHSGDNKY*VNPSIARKPFW Trigger: CCAGAAAGGCTTCCTTGCAATTGATGGGTTTACCCAGTATTTATTGTCTCCAGAATGTGACATTTTTGATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042986.10 |
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