RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCB3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024960

Ensembl transcript IDs: ENSMUST00000025912.10, ENSMUST00000235352.2, ENSMUST00000237074.2, ENSMUST00000237808.2

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCACCGGCCAGGAAGCTAGGAGAGGCCTTGAAGGAGTGCCAGCCTaGCCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTC +
Preference number: 1 (lower is better)
Translates to: PTGQEARRGLEGVPA*PSCRAWPILLPQGL
Trigger: GAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGGCAGGCTGGCACTCCTTCAAGGCCTCTCCTAGCTTCCTGGCCGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR CCA 90 bp TGCCCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTaGTGTTCCTGGCTGGTCCCAGGCTCAGAGCATGTCCTCCGGCTG +
Preference number: 1 (lower is better)
Translates to: CPSCRAWPILLPQGL*CSWLVPGSEHVLRL
Trigger: CAGCCGGAGGACATGCTCTGAGCCTGGGACCAGCCAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR CCA 90 bp TGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCCTaGCTGGTCCCAGGCTCAGAGCATGTCCTCCGGCTGGTGAAGGCC +
Preference number: 1 (lower is better)
Translates to: CRAWPILLPQGLWCS*LVPGSEHVLRLVKA
Trigger: GGCCTTCACCAGCCGGAGGACATGCTCTGAGCCTGGGACCAGCCAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR TCA 90 bp GCTGAGGAAGGTGACTTGGGCAATGGCAGGAATCTCAGGGAGAGCTaGGGCCTTAGCCCTGGGAAGCCCAACCCAGGCCACCCAGTTTCT +
Preference number: 1 (lower is better)
Translates to: AEEGDLGNGRNLRES*GLSPGKPNPGHPVS
Trigger: AGAAACTGGGTGGCCTGGGTTGGGCTTCCCAGGGCTAAGGCCTCAGCTCTCCCTGAGATTCCTGCCATTGCCCAAGTCACCTTCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR CCA 90 bp CACAGGGACCTGGAGCAGGGCCCAGAGCTCCGTTCAGAGATTTATTaGCGCCCCATAGCCCAGGCTAGTGCTTTGCGCTGGATATGCAGA +
Preference number: 1 (lower is better)
Translates to: HRDLEQGPELRSEIY*RPIAQASALRWICR
Trigger: TCTGCATATCCAGCGCAAAGCACTAGCCTGGGCTATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAGGTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR TCA 90 bp ACATGGGATCCGGAAAAGTGGCAGATCTGGAAACTTGACACGGACTaGCTGACAGCTGAGGAAGGTGACTTGGGCAATGGCAGGAATCTC +
Preference number: 1 (lower is better)
Translates to: TWDPEKWQIWKLDTD*LTAEEGDLGNGRNL
Trigger: GAGATTCCTGCCATTGCCCAAGTCACCTTCCTCAGCTGTCAGTCAGTCCGTGTCAAGTTTCCAGATCTGCCACTTTTCCGGATCCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR GCA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTGAAGGAGTGCCAGCCTaGCCCAGCTGCAGAGCTTGG +
Preference number: 2 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPEGVPA*PSCRAW
Trigger: CCAAGCTCTGCAGCTGGGGCAGGCTGGCACTCCTTC...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR GCA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTGAGGCCTTGAAGGAGTaGCAGCCTGCCCCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPEALKE*QPAPAA
Trigger: TGCAGCTGGGGCAGGCTGGCACTCCTTCAAGGCCTC...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR GCA 90 bp CTCTGGTGTTCCTGGCTGGTCCCAGGCTCAGAGCATGTCCTCCGGCTGGTGAAGACACGCAGGCCATCCTaGCTTCCAGCAGGTCTCCAC +
Preference number: 2 (lower is better)
Translates to: LWCSWLVPGSEHVLRLVKTRRPS*LPAGLH
Trigger: GTGGAGACCTGCTGGAAGGCAGGATGGCCTGCGTGT...CTTCACCAGCCGGAGGACATGCTCTGAGCCTGGGACCAGCCAGGAACACCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR TCA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTAATCTCAGGGAGAGCTaGGGCCTTAGCCCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPNLRES*GLSPGK
Trigger: CTTCCCAGGGCTAAGGCCTCAGCTCTCCCTGAGATT...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR CCA 90 bp ACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGTCTGGTGTTCCTGGCTaGTCCCAGGCTCAGAGCATG +
Preference number: 2 (lower is better)
Translates to: TLCFPEHGRGWPHNRASRSGVPG*SQAQSM
Trigger: CATGCTCTGAGCCTGGGACCAGCCAGGAACACCAGA...CCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR CCA 90 bp CATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGAGTAGGTCAGACTTGAAGTTGCCACAGGGTCTCTaGTGTTCCTGGCTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: HGRGWPHNRASRSRSDLKLPQGL*CSWLVP
Trigger: TGGGACCAGCCAGGAACACCAGAGACCCTGTGGCAA...CTTCAAGTCTGACCTACTCCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR TCA 90 bp CATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGAGTAGGTCAGACTTGAAGATGTCCTCCGGCTGGTaGAGGCCATATAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: HGRGWPHNRASRSRSDLKMSSGW*RPYSTE
Trigger: CTCTGTGCTATATGGCCTTCACCAGCCGGAGGACAT...CTTCAAGTCTGACCTACTCCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR TCA 90 bp ACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGTTGACACGGACTGACTaGCAGCTGAGGAAGGTGACT +
Preference number: 2 (lower is better)
Translates to: TLCFPEHGRGWPHNRASRLTRTD*QLRKVT
Trigger: AGTCACCTTCCTCAGCTGTCAGTCAGTCCGTGTCAA...CCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR CCA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTCTGAGGAAGGTGACTTaGGCAATGGCAGGAATCTCA +
Preference number: 2 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPLRKVT*AMAGIS
Trigger: TGAGATTCCTGCCATTGCCCAAGTCACCTTCCTCAG...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR CCA 90 bp CTGGAGCAGGGCCCAGAGCTCCGTTCAGAGATTTATTGGCGCCCCATAGCCCAGGACACTCTCTGCAGATaGACACACCAGGATCTTGGG +
Preference number: 2 (lower is better)
Translates to: LEQGPELRSEIYWRPIAQDTLCR*THQDLG
Trigger: CCCAAGATCCTGGTGTGTCCATCTGCAGAGAGTGTC...CTGGGCTATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR TCA 90 bp CATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGAGTAGGTCAGACTTGAAGAAACTTGACACGGACTaGCTGACAGCTGAGGAAGGT +
Preference number: 2 (lower is better)
Translates to: HGRGWPHNRASRSRSDLKKLDTD*LTAEEG
Trigger: ACCTTCCTCAGCTGTCAGTCAGTCCGTGTCAAGTTT...CTTCAAGTCTGACCTACTCCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR CCA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGCCCACCCAGACTTGTaGCCACCTCTTGCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWAHPDL*PPLAQP
Trigger: TGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGC...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
3UTR-3UTR TCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGTTAGAAGGGGAGGCTaGGGACCAAGAGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAVRRGG*GPRGPR
Trigger: CCTGGGACCTCTTGGTCCTCAGCCTCCCCTTCTAAC...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
3UTR-3UTR GCA 90 bp GCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAAGCAAAGCAACTTGGCCCATTCTCTTaGCACAGGGTCTCTGGTGTT +
Preference number: 2 (lower is better)
Translates to: AFLPDLFAWGCNKNKAKQLGPFS*HRVSGV
Trigger: AACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAG...TTGCTTTGCTTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR GCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGAGGTCCCAGGAAGATaGAGGGAGTTAGAGTTAGTG +
Preference number: 2 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAEVPGR*RELELV
Trigger: CACTAACTCTAACTCCCTGCATCTTCCTGGGACCTC...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
3UTR-3UTR TCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTGAGTTAGAGTTAGTGTaGGGCATTTGCCTCAGATTT +
Preference number: 2 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAELELV*GICLRF
Trigger: AAATCTGAGGCAAATGCCTCACACTAACTCTAACTC...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
3UTR CCA 72 bp TGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCCTaGCTGGTCCCAGGCTCAGAGCATGTCCTCCGGCTG +
Preference number: 3 (lower is better)
Translates to: WPILLPQGLWCS*LVPGSEHVLRL
Trigger: CAGCCGGAGGACATGCTCTGAGCCTGGGACCAGCCAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR CAA 90 bp ACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGGCTTGGCCCATTCTCTaGCCACAGGGTCTCTGGTGT +
Preference number: 3 (lower is better)
Translates to: TLCFPEHGRGWPHNRASRAWPIL*PQGLWC
Trigger: ACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGC...CCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR CAA 90 bp CATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGAGTAGGTCAGACTTGAAGAAGCTAGGAGAGGCCTaGAAGGAGTGCCAGCCTGCC +
Preference number: 3 (lower is better)
Translates to: HGRGWPHNRASRSRSDLKKLGEA*KECQPA
Trigger: GGCAGGCTGGCACTCCTTCAAGGCCTCTCCTAGCTT...CTTCAAGTCTGACCTACTCCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR TCA 72 bp GGCTGGTCCCAGGCTCAGAGCATGTCCTCCGGCTGGTaGAGGCCATATAGCACAGAGCTAACACGCAGGCCA +
Preference number: 3 (lower is better)
Translates to: GWSQAQSMSSGW*RPYSTELTRRP
Trigger: TGGCCTGCGTGTTAGCTCTGTGCTATATGGCCTTCACCAGCCGGAGGACATGCTCTGAGCCTGGGACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR GCA 72 bp CAGGAAGCTAGGAGAGGCCTTGAAGGAGTGCCAGCCTaGCCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCA +
Preference number: 3 (lower is better)
Translates to: QEARRGLEGVPA*PSCRAWPILLP
Trigger: TGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGGCAGGCTGGCACTCCTTCAAGGCCTCTCCTAGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR CCA 72 bp CTTGAAGGAGTGCCAGCCTGCCCCAGCTGCAGAGCTTaGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCC +
Preference number: 3 (lower is better)
Translates to: LEGVPACPSCRA*PILLPQGLWCS
Trigger: GGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGGCAGGCTGGCACTCCTTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR CCA 72 bp CTGGAGCAGGGCCCAGAGCTCCGTTCAGAGATTTATTaGCGCCCCATAGCCCAGGCTAGTGCTTTGCGCTGG +
Preference number: 3 (lower is better)
Translates to: LEQGPELRSEIY*RPIAQASALRW
Trigger: CCAGCGCAAAGCACTAGCCTGGGCTATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR-3UTR CAA 90 bp ACACTTCATTGGCAGGAGATAAGCCCAGATAAGAGGCTGCCTTCCTCCGAGGGGCCCCAGCTGCAGAGCTaGGCCCATTCTCTTGCCACA +
Preference number: 3 (lower is better)
Translates to: TLHWQEISPDKRLPSSEGPQLQS*AHSLAT
Trigger: TGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGG...CCCCTCGGAGGAAGGCAGCCTCTTATCTGGGCTTATCTCCTGCCAATGAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR GCA 72 bp GCGCTGGATATGCAGATAAGTTGCGCCACAACTCTTTaGTTCCCGGAACATGGGAGGGGGTGGCCCCACAAC +
Preference number: 3 (lower is better)
Translates to: ALDMQISCATTL*FPEHGRGWPHN
Trigger: GTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGGCGCAACTTATCTGCATATCCAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR TCA 72 bp CCGGAAAAGTGGCAGATCTGGAAACTTGACACGGACTaGCTGACAGCTGAGGAAGGTGACTTGGGCAATGGC +
Preference number: 3 (lower is better)
Translates to: PEKWQIWKLDTD*LTAEEGDLGNG
Trigger: GCCATTGCCCAAGTCACCTTCCTCAGCTGTCAGTCAGTCCGTGTCAAGTTTCCAGATCTGCCACTTTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR TCA 72 bp AAAAGTGGCAGATCTGGAAACTTGACACGGACTGACTaGCAGCTGAGGAAGGTGACTTGGGCAATGGCAGGA +
Preference number: 3 (lower is better)
Translates to: KSGRSGNLTRTD*QLRKVTWAMAG
Trigger: TCCTGCCATTGCCCAAGTCACCTTCCTCAGCTGTCAGTCAGTCCGTGTCAAGTTTCCAGATCTGCCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR CCA 72 bp TTTGAGGGCCCAACCCACATGGAGTGTTTGGGAAAATaGAGGTCAGCCAGTCAGCGATATAGGACATGGGAT +
Preference number: 3 (lower is better)
Translates to: FEGPTHMECLGK*RSASQRYRTWD
Trigger: ATCCCATGTCCTATATCGCTGACTGGCTGACCTCCATTTTCCCAAACACTCCATGTGGGTTGGGCCCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
3UTR CAA 72 bp GCCAGTCCCCCACCGGCCAGGAAGCTAGGAGAGGCCTaGAAGGAGTGCCAGCCTGCCCCAGCTGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ASPPPARKLGEA*KECQPAPAAEL
Trigger: AAGCTCTGCAGCTGGGGCAGGCTGGCACTCCTTCAAGGCCTCTCCTAGCTTCCTGGCCGGTGGGGGACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGGGGTCTCCACCACGGTaGGCGGCTCCAGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQGSPPR*AAPAAA
Trigger: CGCTGCAGCTGGAGCCGCCCACCGTGGTGGAGACCC...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTGCCACCAGGCGTTCATaGCGCTGCTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPATRRS*RCFWAS
Trigger: AGAGGCCCAGAAGCAGCGCCATGAACGCCTGGTGGC...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp CTCTGGTGTTCCTGGCTGGTCCCAGGCTCAGAGCATGTCCTCCGGCTGGTGAAGCACTCCTGGGTCAGCTaGGCCAGCAGCTTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LWCSWLVPGSEHVLRLVKHSWVS*ASSLGS
Trigger: GGAACCCAAGCTGCTGGCCCAGCTGACCCAGGAGTG...CTTCACCAGCCGGAGGACATGCTCTGAGCCTGGGACCAGCCAGGAACACCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR TCA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGGTTGGAGGGGAGCTGTaGCCCTGGCTGTTGACACGG +
Preference number: 4 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQVGGEL*PWLLTR
Trigger: CCGTGTCAACAGCCAGGGTCACAGCTCCCCTCCAAC...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp CTCTGGTGTTCCTGGCTGGTCCCAGGCTCAGAGCATGTCCTCCGGCTGGTGAAGCTCTCTCGCTGTTCCTaGCACTCCTGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWCSWLVPGSEHVLRLVKLSRCS*HSWVSW
Trigger: CCAGCTGACCCAGGAGTGTCAGGAACAGCGAGAGAG...CTTCACCAGCCGGAGGACATGCTCTGAGCCTGGGACCAGCCAGGAACACCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp CCCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCCTGCGCAGGTCTCGATCCTaGCGGCTCCGTAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: PQLQSLAHSLATGSLVFLRRSRS*RLRSFT
Trigger: GGTGAAGCTACGGAGCCGGCAGGATCGAGACCTGCG...CAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTAGGCGTTCATGGCGCTaGTTCTGGGCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPRRSWR*FWASSS
Trigger: GCTGGAAGAGGCCCAGAAGCAGCGCCATGAACGCCT...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTGAGCGGCTAGTTGCTTaGCCCGCTGGTCCATTAGGC +
Preference number: 4 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPERLVA*PAGPLG
Trigger: GCCTAATGGACCAGCGGGCCAAGCAACTAGCCGCTC...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp AGGGACCTGGAGCAGGGCCCAGAGCTCCGTTCAGAGATTTATTGGCGCCCCATAACTTCCCCTCAGCCCTaGCCTGGGCCAGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: RDLEQGPELRSEIYWRPITSPQP*PGPGHP
Trigger: TGGATGGCCTGGCCCAGGCCAGGGCTGAGGGGAAGT...TATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp CCCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCCTGGTGCATGACCATTGCTaGCACAGGCCACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PQLQSLAHSLATGSLVFLVHDHC*HRPPGG
Trigger: GCCCCCTGGTGGCCTGTGCCAGCAATGGTCATGCAC...CAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR TCA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTCCTCACTCTCCCCAATaGGAGCGGCTAGTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPPHSPQ*ERLVAW
Trigger: CCAAGCAACTAGCCGCTCTCATTGGGGAGAGTGAGG...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR TCA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGGTCTCTGTGCTGGCCTaGGCCTCACTCTCCCCAATG +
Preference number: 4 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQVSVLA*ASLSPM
Trigger: CATTGGGGAGAGTGAGGCTCAGGCCAGCACAGAGAC...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGCCTCAAAGGCTGCGATaGGAAGTGAGGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQPQRLR*EVRPAW
Trigger: CCACGCTGGCCTCACTTCGCATCGCAGCCTTTGAGG...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTATCATCTCGCTGCCCTaGGCTACTGAGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPIISLP*ATEGGA
Trigger: AGCTCCTCCCTCAGTAGCCCAGGGCAGCGAGATGAT...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp GCCTGCCCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTGTCTCCACATCTGCCTaGGCTTCCCTCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ACPSCRAWPILLPQGLWCVSTSA*ASLSSN
Trigger: GTTGGAGCTGAGGGAAGCCCAGGCAGATGTGGAGAC...ACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp ACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGCGCTGGTGCTTCTTATaGAACTCCCGCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: TLCFPEHGRGWPHNRASRRWCFL*NSRRSR
Trigger: TCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCG...CCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp CCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCCTGGCCCACCACTCCCAGGTaGATGACCATTGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: PSCRAWPILLPQGLWCSWPTTPR*MTIAGT
Trigger: TGTGCCAGCAATGGTCATGCACCTGGGAGTGGTGGG...CCAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGGCTGGGCCAGCAGCTTaGGTTCCTCTTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQAGPAA*VPLPLA
Trigger: AGCTAGAGGAAGAGGAACCCAAGCTGCTGGCCCAGC...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGAGTAGGTCAGACTTGAAGGCTGGGCCAGCAGCTTaGGTTCCTCTTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: HGRGWPHNRASRSRSDLKAGPAA*VPLPLA
Trigger: AGCTAGAGGAAGAGGAACCCAAGCTGCTGGCCCAGC...CTTCAAGTCTGACCTACTCCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp AGGGACCTGGAGCAGGGCCCAGAGCTCCGTTCAGAGATTTATTGGCGCCCCATACACCGACGGATCTCCTaGGGCAACCTCTCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RDLEQGPELRSEIYWRPIHRRIS*GNLSRC
Trigger: ACAGCGAGAGAGGTTGCCCCAGGAGATCCGTCGGTG...TATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR TCA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGGGTACAGCACTTCGTTaGGTCTCGGGTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQGTALR*VSGLSA
Trigger: AGCAGAGAGACCCGAGACTCAACGAAGTGCTGTACC...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGGATATGTCTCTGTGCTaGCCTGAGCCTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQDMSLC*PEPHSP
Trigger: GGGAGAGTGAGGCTCAGGCCAGCACAGAGACATATC...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCCTGGGATATGTCTCTGTGCTaGCCTGAGCCTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSCRAWPILLPQGLWCSWDMSLC*PEPHSP
Trigger: GGGAGAGTGAGGCTCAGGCCAGCACAGAGACATATC...CCAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR TCA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGCTGGGGGACCCAAGCTaGGGTGAGGAGGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWLGDPS*GEEGSV
Trigger: CACAGAGCCCTCCTCACCTCAGCTTGGGTCCCCCAG...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp ACACTTCATTGGCAGGAGATAAGCCCAGATAAGAGGCTGCCTTCCTCCGAGGGGGTCTCTGTGCTGGCCTaGGCCTCACTCTCCCCAATG +
Preference number: 4 (lower is better)
Translates to: TLHWQEISPDKRLPSSEGVSVLA*ASLSPM
Trigger: CATTGGGGAGAGTGAGGCTCAGGCCAGCACAGAGAC...CCCCTCGGAGGAAGGCAGCCTCTTATCTGGGCTTATCTCCTGCCAATGAAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGACGCCTGCGTTGAGCTaGATTGGCAAATCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQTPALS*IGKSKV
Trigger: GACCTTGGATTTGCCAATGCAGCTCAACGCAGGCGT...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp ACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGCTGAGATGCTGTTGTTaGGCTTCCTGTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TLCFPEHGRGWPHNRASRLRCCC*ASCPGS
Trigger: AGATCCTGGACAGGAAGCGCAACAACAGCATCTCAG...CCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGTGGGCAGCACAACCTTaGGGAAGTCAAAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQWAAQP*GSQRVP
Trigger: AGGAACCCTTTGACTTCCCCAAGGTTGTGCTGCCCA...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCGGTAGGGCGAGGTCTTaGAGGCTGCCTCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGIGRARS*RLPQRW
Trigger: CCATCGCTGAGGCAGCCTTCAAGACCTCGCCCTACC...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGGACCCAAGCTGAGGTaGGGAGGGCTCTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLGPKLR*GGLCGG
Trigger: GCCGCCACAGAGCCCTCCTCACCTCAGCTTGGGTCC...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCCGCAGGTCTCGATCCTaGCGGCTCCGTAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGIRRSRS*RLRSFT
Trigger: GGTGAAGCTACGGAGCCGGCAGGATCGAGACCTGCG...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTACCGAGTTGGTGGCCTTaGCCAGGGCACTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLPSWWP*PGHWGR
Trigger: CCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGG...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp GCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAAGCAAAGCAACCGAGTTGGTGGCCTTaGCCAGGGCACTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AFLPDLFAWGCNKNKAKQPSWWP*PGHWGR
Trigger: CCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGG...TTGCTTTGCTTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp AGGGACCTGGAGCAGGGCCCAGAGCTCCGTTCAGAGATTTATTGGCGCCCCATATCCTCTTCCTCTAGCTaGTGGAGGACTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RDLEQGPELRSEIYWRPISSSSS*WRTCCC
Trigger: GCAACAGCAAGTCCTCCAGCAGCTAGAGGAAGAGGA...TATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGTCAGCGCTGGACAGGTaGCCACCACTCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWSALDR*PPLPGA
Trigger: TGCACCTGGGAGTGGTGGGCACCTGTCCAGCGCTGA...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGCCCATCAGGTCCTGTaGACTAGGCAGGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWAHQVL*TRQGDA
Trigger: GGCATCCCCCTGCCTAGTCCACAGGACCTGATGGGC...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAAGGCAGCTGTCGGAGCTaGGGGACCCAAGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GECYGVQALALSLGLKLEGSCRS*GTQAEV
Trigger: CACCTCAGCTTGGGTCCCCCAGCTCCGACAGCTGCC...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGCACTCCTGGGTCAGCTaGGCCAGCAGCTTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWHSWVS*ASSLGS
Trigger: GGAACCCAAGCTGCTGGCCCAGCTGACCCAGGAGTG...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCGTGCATGACCATTGCTaGCACAGGCCACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGIVHDHC*HRPPGG
Trigger: GCCCCCTGGTGGCCTGTGCCAGCAATGGTCATGCAC...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
3UTR CAA 72 bp TGCGCTGGATATGCAGATAAGTTGCGCCACAACTCTTaGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAA +
Preference number: 4 (lower is better)
Translates to: CAGYADKLRHNS*LPGTWEGVAPQ
Trigger: TTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGGCGCAACTTATCTGCATATCCAGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR TCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCGTACATCTCCACCGATaGTGGTCCAGCCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGIVHLHR*WSSQLA
Trigger: GGCCAGCTGGCTGGACCATCATCGGTGGAGATGTAC...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCAGCTGCTGGAGGACTTaGTGTTGCCCTGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGISCWRT*CCPATR
Trigger: CCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCAGCT...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCCAGGTGCATGACCATTaGTGGCACAGGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGIQVHDH*WHRPPG
Trigger: CCCTGGTGGCCTGTGCCAGCAATGGTCATGCACCTG...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CCCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCCTGTTCACCATAGCCTTGTaGCTTCTGAGCTCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: PQLQSLAHSLATGSLVFLFTIAL*LLSSSR
Trigger: TCTAGAGGAGCTCAGAAGCCACAAGGCTATGGTGAA...CAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCCACCGACGGATCTCCTaGGGCAACCTCTCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGIHRRIS*GNLSRC
Trigger: ACAGCGAGAGAGGTTGCCCCAGGAGATCCGTCGGTG...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCAGGCTGCGATGCGAAGTaGGGCCAGCGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPGCDAK*GQRGQH
Trigger: GTGCTGCCCACGCTGGCCTCACTTCGCATCGCAGCC...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGCCTCACTCTCCCCAATaGGAGCGGCTAGTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWPHSPQ*ERLVAW
Trigger: CCAAGCAACTAGCCGCTCTCATTGGGGAGAGTGAGG...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp GTTTCTCTGGCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAAGTTGGAGGGGAGCTGTaGCCCTGGCTGTTGACACGG +
Preference number: 4 (lower is better)
Translates to: VSLAFLPDLFAWGCNKNKVGGEL*PWLLTR
Trigger: CCGTGTCAACAGCCAGGGTCACAGCTCCCCTCCAAC...TTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGCCAGAGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR TCA 90 bp GCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAAGCAAAGCAACCACTCCCAGGTGCATaGCCATTGCTGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: AFLPDLFAWGCNKNKAKQPLPGA*PLLAQA
Trigger: GGCCTGTGCCAGCAATGGTCATGCACCTGGGAGTGG...TTGCTTTGCTTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp ACACTTCATTGGCAGGAGATAAGCCCAGATAAGAGGCTGCCTTCCTCCGAGGGGCCTGATATGTCTCTGTaGTGGCCTGAGCCTCACTCT +
Preference number: 4 (lower is better)
Translates to: TLHWQEISPDKRLPSSEGPDMSL*WPEPHS
Trigger: AGAGTGAGGCTCAGGCCAGCACAGAGACATATCAGG...CCCCTCGGAGGAAGGCAGCCTCTTATCTGGGCTTATCTCCTGCCAATGAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp GCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAAGCAAAGCAATCAGCGCTGGACAGGTaGCCACCACTCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: AFLPDLFAWGCNKNKAKQSALDR*PPLPGA
Trigger: TGCACCTGGGAGTGGTGGGCACCTGTCCAGCGCTGA...TTGCTTTGCTTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCATCATCTCGCTGCCCTaGGCTACTGAGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGIIISLP*ATEGGA
Trigger: AGCTCCTCCCTCAGTAGCCCAGGGCAGCGAGATGAT...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AGGGACCTGGAGCAGGGCCCAGAGCTCCGTTCAGAGATTTATTGGCGCCCCATAACTCTCGATACTGTTTaGCCTCCTCTTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RDLEQGPELRSEIYWRPITLDTV*PPLPPS
Trigger: TGAAGGAGGAAGAGGAGGCCAAACAGTATCGAGAGT...TATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAATGGGTGTTCTCCTCCTaGCTCTCCGAGTCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GECYGVQALALSLGLKLEWVFSS*LSESAL
Trigger: CAGCGCTGACTCGGAGAGCCAGGAGGAGAACACCCA...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTAGGCCGCTTGCGCACTaGGCTGTCAGGGACACCTGT +
Preference number: 4 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLARPLAH*AVRDTC
Trigger: ACAGGTGTCCCTGACAGCTCAGTGCGCAAGCGGCCT...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTCCACTCCCAGGTGCATaGCCATTGCTGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAPLPGA*PLLAQA
Trigger: GGCCTGTGCCAGCAATGGTCATGCACCTGGGAGTGG...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGTTCCAGAGGCCGCTTaGGCACTGAGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLVPEAA*ALSCQG
Trigger: TCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAAC...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp CTGGAGCAGGGCCCAGAGCTCCGTTCAGAGATTTATTGGCGCCCCATAGCCCAGTCCATTAGGCTTACGTaGTTGATGGGGTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: LEQGPELRSEIYWRPIAQSIRLT*LMGLIK
Trigger: CTTGATTAACCCCATCAAGCACGTAAGCCTAATGGA...CTGGGCTATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGCGCTGGTGCTTCTTATaGAACTCCCGCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWRWCFL*NSRRSR
Trigger: TCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCG...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAAGGCGTTCATGGCGCTaGTTCTGGGCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLRRSWR*FWASSS
Trigger: GCTGGAAGAGGCCCAGAAGCAGCGCCATGAACGCCT...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp GCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAAGCAAAGCAAAGCTGCTGGAGGACTTaGTGTTGCCCTGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: AFLPDLFAWGCNKNKAKQSCWRT*CCPATR
Trigger: CCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCAGCT...TTGCTTTGCTTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp GCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAAGCAAAGCAACAGGTGCATGACCATTaGTGGCACAGGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: AFLPDLFAWGCNKNKAKQQVHDH*WHRPPG
Trigger: CCCTGGTGGCCTGTGCCAGCAATGGTCATGCACCTG...TTGCTTTGCTTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CCA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAAGGTACGGCTTGCCCTTaGCACCTATCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GECYGVQALALSLGLKLEGTACP*HLSPAG
Trigger: TCCTGCTGGAGATAGGTGCCAAGGGCAAGCCGTACC...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAATCTGAGGCTCCAGGCTaGTCTTCTCGAGTCCCACCT +
Preference number: 4 (lower is better)
Translates to: GECYGVQALALSLGLKLESEAPG*SSRVPP
Trigger: AGGTGGGACTCGAGAAGACCAGCCTGGAGCCTCAGA...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTACTTCCCCTCAGCCCTaGCCTGGGCCAGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAATSPQP*PGPGHP
Trigger: TGGATGGCCTGGCCCAGGCCAGGGCTGAGGGGAAGT...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAAGTCTCCACATCTGCCTaGGCTTCCCTCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GECYGVQALALSLGLKLEVSTSA*ASLSSN
Trigger: GTTGGAGCTGAGGGAAGCCCAGGCAGATGTGGAGAC...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCCACCAGGCGTTCATaGCGCTGCTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLATRRS*RCFWAS
Trigger: AGAGGCCCAGAAGCAGCGCCATGAACGCCTGGTGGC...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp GTTTCTCTGGCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAATGGGTGTTCTCCTCCTaGCTCTCCGAGTCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: VSLAFLPDLFAWGCNKNKWVFSS*LSESAL
Trigger: CAGCGCTGACTCGGAGAGCCAGGAGGAGAACACCCA...TTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGCCAGAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR TCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTACGTCCCACACAGGGTTaGATGAGTTCCCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLRPTQG*MSSPGM
Trigger: CATCCCAGGGGAACTCATTCAACCCTGTGTGGGACG...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp ACACTTCATTGGCAGGAGATAAGCCCAGATAAGAGGCTGCCTTCCTCCGAGGGGGCTCCTTCAGCCTCTTaGACTGTGTTGTGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: TLHWQEISPDKRLPSSEGAPSAS*TVLCVY
Trigger: ATACACACACAACACAGTTCAAGAGGCTGAAGGAGC...CCCCTCGGAGGAAGGCAGCCTCTTATCTGGGCTTATCTCCTGCCAATGAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGGTCAGTTGCTCCATTaGCTTGGTCTCCACGAAGGA +
Preference number: 4 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWGQLLH*LGLHEG
Trigger: TCCTTCGTGGAGACCAAGGCAATGGAGCAACTGACC...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTATCACCAGGTTCCGACTaGAGGCCTCCTCGTCCCATT +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLSPGSD*RPPRPI
Trigger: AATGGGACGAGGAGGCCTCCAGTCGGAACCTGGTGA...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTACCCCACAGCAGTGCCTaGCGGTACATCTCCACCGAT +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLPHSSA*RYISTD
Trigger: ATCGGTGGAGATGTACCGCCAGGCACTGCTGTGGGG...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTGTGAGGAGGGCTCTGTaGCGGCCGAGCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAVRRAL*RPSSHS
Trigger: TGAGTGAGAGCTCGGCCGCCACAGAGCCCTCCTCAC...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCTTGAGGGCAACAAGCTaGCAACCCACGTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGILRATS*QPTFQK
Trigger: CTTCTGGAACGTGGGTTGCCAGCTTGTTGCCCTCAA...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTATCACCTAGAGACTTCTaGGGCTCCAGGCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLSPRDF*GSRLVF
Trigger: GAAGACCAGCCTGGAGCCTCAGAAGTCTCTAGGTGA...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCTCTCTCGCTGTTCCTaGCACTCCTGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAALSRCS*HSWVSW
Trigger: CCAGCTGACCCAGGAGTGTCAGGAACAGCGAGAGAG...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCCCATCCTGGTTCACCTaGAGCTTCAGCTTCGTGTAT +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGIPSWFT*SFSFVY
Trigger: ATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGG...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTGGGTCATGTCCATaGTCAGATCCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAAGSCP*SDPGPP
Trigger: TGGAGGCCCTGGATCTGAGCATGGACATGACCCAGC...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGCTGAGATGCTGTTGTTaGGCTTCCTGTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWLRCCC*ASCPGS
Trigger: AGATCCTGGACAGGAAGCGCAACAACAGCATCTCAG...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGCTGAGGCATGTAGTTaGAGGAGTCCACTCGTGTGC +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLAEACS*RSPLVC
Trigger: GCACACGAGTGGACTCCTCCAACTACATGCCTCAGC...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTGAAGTGAGGCCAGCGTaGGCAGCACAACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAEVRPA*AAQPWG
Trigger: TCCCCAAGGTTGTGCTGCCCACGCTGGCCTCACTTC...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGGCAGGCACAAAGGTTaGTTGGCCTCGTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLGRHKG*LASFRR
Trigger: CCTGCGAAACGAGGCCAACCAACCTTTGTGCCTGCC...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCAGAGCGGCTAGTTGCTTaGCCCGCTGGTCCATTAGGC +
Preference number: 4 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPERLVA*PAGPLG
Trigger: GCCTAATGGACCAGCGGGCCAAGCAACTAGCCGCTC...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTACCTCTGACCAGACCTTaGCTGTGTCATCTTGCACGG +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLPLTRP*LCHLAR
Trigger: CCGTGCAAGATGACACAGTCAAGGTCTGGTCAGAGG...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTTCTCAAAGGAGAGGATaGCAGGGTAGGGCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLASQRRG*QGRARS
Trigger: AGACCTCGCCCTACCCTGTCATCCTCTCCTTTGAGA...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGACATAGTGGTATCCTaGGCGGATAGCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLDIVVS*ADSRDR
Trigger: CCTGTCTCTGCTATCCGCTCAGGATACCACTATGTC...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACCCACCACTCCCAGGTaGATGACCATTGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPPTTPR*MTIAGT
Trigger: TGTGCCAGCAATGGTCATGCACCTGGGAGTGGTGGG...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTCAGGGACACCTGTGCTaGGCCGATGTCGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAQGHLC*ADVASY
Trigger: ATAAGAAGCGACATCGGCCCAGCACAGGTGTCCCTG...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCACTCTCGATACTGTTTaGCCTCCTCTTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VAFYYPELQGSTSCSLGITLDTV*PPLPPS
Trigger: TGAAGGAGGAAGAGGAGGCCAAACAGTATCGAGAGT...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAATAAAGTCCATGAGCTaGTCCAGAGTGAGGTACGGC +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLIKSMS*SRVRYG
Trigger: GCCGTACCTCACTCTGGAGCAGCTCATGGACTTTAT...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAAAGTCTCGGGTCTCTCTaGTTCTGGTTGATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GECYGVQALALSLGLKLESLGSL*FWLIKS
Trigger: GGACTTTATCAACCAGAAGCAGAGAGACCCGAGACT...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCATCAGCCATCTTGGCCTaGTGCTTTGCCGAGTCGACA +
Preference number: 4 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPSAILA*CFAEST
Trigger: TGTCGACTCGGCAAAGCAGCAGGCCAAGATGGCTGA...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGGACTCTTGGTCAGTTaGTCCATTGCCTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAGLLVS*SIALVS
Trigger: GGAGACCAAGGCAATGGAGCAACTGACCAAGAGTCC...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGGTGCCCAACAAATTTaGCACCCTCCTCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAGAQQI*HPPQRL
Trigger: CAGCCTTTGAGGAGGGTGGCAAATTTGTTGGGCACC...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTACCTGATATGTCTCTGTaGTGGCCTGAGCCTCACTCT +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLPDMSL*WPEPHS
Trigger: AGAGTGAGGCTCAGGCCAGCACAGAGACATATCAGG...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp GTTTCTCTGGCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAAACCGACTCAGTGATGTaGCGCCGATTAATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VSLAFLPDLFAWGCNKNKTDSVM*RRLISV
Trigger: GACAGAGATTAATCGGCGGCACATCACTGAGTCGGT...TTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGCCAGAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR GCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTATCCTCTTCCTCTAGCTaGTGGAGGACTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLSSSSS*WRTCCC
Trigger: GCAACAGCAAGTCCTCCAGCAGCTAGAGGAAGAGGA...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTATGTCCACCTCCATGTTaGGTCCTGTCCAGTACAAGA +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLCPPPC*VLSSTR
Trigger: TCTTGTACTGGACAGGACCCAACATGGAGGTGGACA...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTGGAATCCGTCCATCCTaGTTCACCTGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAGIRPS*FTCSFS
Trigger: GCTGAAGCTGCAGGTGAACCAGGATGGACGGATTCC...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAAGTACTCAGCCATCTTaGCCTGCTGCTTTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLSTQPS*PAALPS
Trigger: ACTCGGCAAAGCAGCAGGCCAAGATGGCTGAGTACT...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGGCAAATCCAAGGTCTaGAAGTTGAGGGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: LGECYGVQALALSLGLKLGKSKV*KLRATS
Trigger: GCTTGTTGCCCTCAACTTCCAGACCTTGGATTTGCC...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCGTCTTGTGTCAACTaGGAGGCCAAACATGTCCAC +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLASCVN*EAKHVH
Trigger: GTGGACATGTTTGGCCTCCCAGTTGACACAAGACGC...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGGTCTCCACGAAGGATaGCATCTCGAAGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLGLHEG*HLEALV
Trigger: AACAAGTGCTTCGAGATGTCATCCTTCGTGGAGACC...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTCCTTCAGCCTCTTaGACTGTGTTGTGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLAPSAS*TVLCVY
Trigger: ATACACACACAACACAGTTCAAGAGGCTGAAGGAGC...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTGTACTCAAACACGCCTaGGTTGAGCTGCATTGGCAA +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAVLKHA*VELHWQ
Trigger: TTGCCAATGCAGCTCAACGCAGGCGTGTTTGAGTAC...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAATCCATTAGGCTTACGTaGTTGATGGGGTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: GECYGVQALALSLGLKLESIRLT*LMGLIK
Trigger: CTTGATTAACCCCATCAAGCACGTAAGCCTAATGGA...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTACCGACTCAGTGATGTaGCGCCGATTAATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAATDSVM*RRLISV
Trigger: GACAGAGATTAATCGGCGGCACATCACTGAGTCGGT...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGGGTCTCTCTGCTTCTaGTTGATAAAGTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAGSLCF*LIKSMS
Trigger: GCTCATGGACTTTATCAACCAGAAGCAGAGAGACCC...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTATTTGCCGAGTCGACATaGTTCTCAAAGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLFAEST*FSKERM
Trigger: CATCCTCTCCTTTGAGAACCATGTCGACTCGGCAAA...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTGTCCTGGTGGTCATCTaGGATGTAGTCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAVLVVI*DVVRSF
Trigger: GAAGCTTCTGACTACATCCCAGATGACCACCAGGAC...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp CTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTATTGACTGTGTCATCTTaGACGGCCATGAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: LPKYKGLLSTTQNSRVPLLTVSS*TAMKFK
Trigger: CTTGAACTTCATGGCCGTGCAAGATGACACAGTCAA...TAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCAAAAATATGCGCTCAGTaGCTGGGTCATGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPKICAQ*LGHVHA
Trigger: AGCATGGACATGACCCAGCCACTGAGCGCATATTTT...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCATGCGTTGAGCTGCATTaGCAAATCCAAGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPCVELH*QIQGLE
Trigger: TTCCAGACCTTGGATTTGCCAATGCAGCTCAACGCA...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTTTCACCATAGCCTTGTaGCTTCTGAGCTCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAFTIAL*LLSSSR
Trigger: TCTAGAGGAGCTCAGAAGCCACAAGGCTATGGTGAA...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
3UTR CAA 72 bp ATGGACACACCAGGATCTTGGGACTTAGTTTGTTTTTaGAGGGCCCAACCCACATGGAGTGTTTGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: MDTPGSWDLVCF*RAQPTWSVWEN
Trigger: ATTTTCCCAAACACTCCATGTGGGTTGGGCCCTCAAAAAACAAACTAAGTCCCAAGATCCTGGTGTGTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR TCA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACATCTTGCACGGCCATaGAGTTCAAGAATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPHLARP*SSRMWY
Trigger: ATACCACATTCTTGAACTTCATGGCCGTGCAAGATG...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR GCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTGGAGTTGATAAAATATaGGCTCAGTGGCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAGVDKI*AQWLGH
Trigger: ATGACCCAGCCACTGAGCGCATATTTTATCAACTCC...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR TCA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTGAGATAGGTGTTGTGTaGGGAGTTGATAAAATATGC +
Preference number: 4 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAEIGVV*GVDKIC
Trigger: GCATATTTTATCAACTCCTCACACAACACCTATCTC...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 90 bp CTTCCTCCTTCACGTCCTCCGAGTTGGTGGCCTTGCCCAGGGCACTaGGGGAGGGCCGGCACTTCCCCTCAGCCCTGGCCTGGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LPPSRPPSWWPCPGH*GRAGTSPQPWPGPG
Trigger: GCCTGGCCCAGGCCAGGGCTGAGGGGAAGTGCCGGCCCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS TCA 90 bp CTCTCCGAGTCAGCGCTGGACAGGTGCCCACCACTCCCAGGTGCATaGCCATTGCTGGCACAGGCCACCAGGGGGCCGTCCCCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LSESALDRCPPLPGA*PLLAQATRGPSPSP
Trigger: GGGACTGGGGGACGGCCCCCTGGTGGCCTGTGCCAGCAATGGTCATGCACCTGGGAGTGGTGGGCACCTGTCCAGCGCTGACTCGGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS GCA 90 bp AGTCAGCGCTGGACAGGTGCCCACCACTCCCAGGTGCATGACCATTaGTGGCACAGGCCACCAGGGGGCCGTCCCCCAGTCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SQRWTGAHHSQVHDH*WHRPPGGRPPVPLL
Trigger: CAGCAGAGGGACTGGGGGACGGCCCCCTGGTGGCCTGTGCCAGCAATGGTCATGCACCTGGGAGTGGTGGGCACCTGTCCAGCGCTGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 90 bp GCCAGGCCATCCAGAAGGCGGCGGGTGAGGGCCACAGCCTTGCGCTaGTGCTTCTTATGCAACTCCCGCAGGTCTCGATCCTGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: ARPSRRRRVRATALR*CFLCNSRRSRSCRL
Trigger: GAGCCGGCAGGATCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCGCAAGGCTGTGGCCCTCACCCGCCGCCTTCTGGATGGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS GCA 90 bp AGGCCATCCAGAAGGCGGCGGGTGAGGGCCACAGCCTTGCGCTGGTaGTTCTTATGCAACTCCCGCAGGTCTCGATCCTGCCGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: RPSRRRRVRATALRW*FLCNSRRSRSCRLR
Trigger: ACGGAGCCGGCAGGATCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCGCAAGGCTGTGGCCCTCACCCGCCGCCTTCTGGATGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp CCACAACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTTCCGAGTTGGTGGCCTaGCCCAGGGCACTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: PQLFASRNMGGGGPTTGPSELVA*PRALGE
Trigger: CTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGA...AGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGTTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS GCA 90 bp GTGAGGAGGGCTCTGTGGCGGCCGAGCTCTCACTCAAGGCCGAGTTaGTCTGTTCCAGAGGCCGCTTGCGCACTGAGCTGTCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: VRRALWRPSSHSRPS*SVPEAACALSCQGH
Trigger: GTGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCCTTGAGTGAGAGCTCGGCCGCCACAGAGCCCTCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 90 bp TCTGAGGCTCCAGGCTGGTCTTCTCGAGTCCCACCTCCTCCCCATTaGTTAGGCCAGGGCAGCTGTCGGAGCTGGGGGACCCAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SEAPGWSSRVPPPPH*LGQGSCRSWGTQAE
Trigger: CTCAGCTTGGGTCCCCCAGCTCCGACAGCTGCCCTGGCCTAAGCAATGGGGAGGAGGTGGGACTCGAGAAGACCAGCCTGGAGCCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 90 bp AGAAGGCGGCGGGTGAGGGCCACAGCCTTGCGCTGGTGCTTCTTATaGAACTCCCGCAGGTCTCGATCCTGCCGGCTCCGTAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: RRRRVRATALRWCFL*NSRRSRSCRLRSFT
Trigger: GGTGAAGCTACGGAGCCGGCAGGATCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCGCAAGGCTGTGGCCCTCACCCGCCGCCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 90 bp AGCTGTCGGAGCTGGGGGACCCAAGCTGAGGTGAGGAGGGCTCTGTaGCGGCCGAGCTCTCACTCAAGGCCGAGTTGCTCTGTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SCRSWGTQAEVRRAL*RPSSHSRPSCSVPE
Trigger: CTCTGGAACAGAGCAACTCGGCCTTGAGTGAGAGCTCGGCCGCCACAGAGCCCTCCTCACCTCAGCTTGGGTCCCCCAGCTCCGACAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 90 bp CTCGATACTGTTTGGCCTCCTCTTCCTCCTTCACGTCCTCCGAGTTaGTGGCCTTGCCCAGGGCACTGGGGGAGGGCCGGCACTTCCCCT +
Preference number: 5 (lower is better)
Translates to: LDTVWPPLPPSRPPS*WPCPGHWGRAGTSP
Trigger: AGGGGAAGTGCCGGCCCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAGAGGAGGCCAAACAGTATCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGTCCGAGTTGGTGGCCTaGCCCAGGGCACTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQSELVA*PRALGE
Trigger: CTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGA...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS TCA 90 bp AGCAGGCACCGACGGATCTCCTGGGGCAACCTCTCTCGCTGTTCCTaGCACTCCTGGGTCAGCTGGGCCAGCAGCTTGGGTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SRHRRISWGNLSRCS*HSWVSWASSLGSSS
Trigger: GGAAGAGGAACCCAAGCTGCTGGCCCAGCTGACCCAGGAGTGTCAGGAACAGCGAGAGAGGTTGCCCCAGGAGATCCGTCGGTGCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS GCA 90 bp CCGAGCTCTCACTCAAGGCCGAGTTGCTCTGTTCCAGAGGCCGCTTaGGCACTGAGCTGTCAGGGACACCTGTGCTGGGCCGATGTCGCT +
Preference number: 5 (lower is better)
Translates to: PSSHSRPSCSVPEAA*ALSCQGHLCWADVA
Trigger: AGCGACATCGGCCCAGCACAGGTGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCCTTGAGTGAGAGCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 90 bp TGGGCCAGCAGCTTGGGTTCCTCTTCCTCTAGCTGCTGGAGGACTTaGTGTTGCCCTGCCACCAGGCGTTCATGGCGCTGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: WASSLGSSSSSCWRT*CCPATRRSWRCFWA
Trigger: GGCCCAGAAGCAGCGCCATGAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCAGCTAGAGGAAGAGGAACCCAAGCTGCTGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS GCA 90 bp TCCTGGGTCAGCTGGGCCAGCAGCTTGGGTTCCTCTTCCTCTAGCTaGTGGAGGACTTGCTGTTGCCCTGCCACCAGGCGTTCATGGCGC +
Preference number: 5 (lower is better)
Translates to: SWVSWASSLGSSSSS*WRTCCCPATRRSWR
Trigger: GCGCCATGAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCAGCTAGAGGAAGAGGAACCCAAGCTGCTGGCCCAGCTGACCCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp CTCTGGTGTTCCTGGCTGGTCCCAGGCTCAGAGCATGTCCTCCGGCTGGTGAAGTTCACGTCCTCCGAGTaGGTGGCCTTGCCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LWCSWLVPGSEHVLRLVKFTSSE*VALPRA
Trigger: TGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAA...CTTCACCAGCCGGAGGACATGCTCTGAGCCTGGGACCAGCCAGGAACACCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp ACTCTTTGCTTCCCGGAACATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGTGCTCCAGCTTCCGCTaGGTCTCCACATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: TLCFPEHGRGWPHNRASRCSSFR*VSTSAW
Trigger: CCAGGCAGATGTGGAGACCAAGCGGAAGCTGGAGCA...CCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATGTTCCGGGAAGCAAAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGCTGGAGGACTTGCTGTaGCCCTGCCACCAGGCGTTC +
Preference number: 5 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQLEDLL*PCHQAF
Trigger: GAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAG...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 90 bp AGCAGCTTGGGTTCCTCTTCCTCTAGCTGCTGGAGGACTTGCTGTTaGCCTGCCACCAGGCGTTCATGGCGCTGCTTCTGGGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SSLGSSSSSCWRTCC*PATRRSWRCFWASS
Trigger: GGAAGAGGCCCAGAAGCAGCGCCATGAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCAGCTAGAGGAAGAGGAACCCAAGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGTGCTCCAGCTTCCGCTaGGTCTCCACATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQCSSFR*VSTSAW
Trigger: CCAGGCAGATGTGGAGACCAAGCGGAAGCTGGAGCA...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AGGGACCTGGAGCAGGGCCCAGAGCTCCGTTCAGAGATTTATTGGCGCCCCATACTGGAGGACTTGCTGTaGCCCTGCCACCAGGCGTTC +
Preference number: 5 (lower is better)
Translates to: RDLEQGPELRSEIYWRPILEDLL*PCHQAF
Trigger: GAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAG...TATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS GCA 90 bp GCCTTGCGCTGGTGCTTCTTATGCAACTCCCGCAGGTCTCGATCCTaGCGGCTCCGTAGCTTCACCATAGCCTTGTGGCTTCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: ALRWCFLCNSRRSRS*RLRSFTIALWLLSS
Trigger: GGAGCTCAGAAGCCACAAGGCTATGGTGAAGCTACGGAGCCGGCAGGATCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS GCA 90 bp TGCTGGAGGACTTGCTGTTGCCCTGCCACCAGGCGTTCATGGCGCTaGTTCTGGGCCTCTTCCAGCCGTCTGATGGAGTTTACCGACTCA +
Preference number: 5 (lower is better)
Translates to: CWRTCCCPATRRSWR*FWASSSRLMEFTDS
Trigger: TGAGTCGGTAAACTCCATCAGACGGCTGGAAGAGGCCCAGAAGCAGCGCCATGAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 90 bp CGCAGGTCTCGATCCTGCCGGCTCCGTAGCTTCACCATAGCCTTGTaGCTTCTGAGCTCCTCTAGAGGTGTAGGGGTCACCTCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: RRSRSCRLRSFTIAL*LLSSSRGVGVTSER
Trigger: CCTCTCTGAGGTGACCCCTACACCTCTAGAGGAGCTCAGAAGCCACAAGGCTATGGTGAAGCTACGGAGCCGGCAGGATCGAGACCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 90 bp TCTAGCTGCTGGAGGACTTGCTGTTGCCCTGCCACCAGGCGTTCATaGCGCTGCTTCTGGGCCTCTTCCAGCCGTCTGATGGAGTTTACC +
Preference number: 5 (lower is better)
Translates to: SSCWRTCCCPATRRS*RCFWASSSRLMEFT
Trigger: GGTAAACTCCATCAGACGGCTGGAAGAGGCCCAGAAGCAGCGCCATGAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCAGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp TCTACCCATAGCCCAGTGCCCACCCAGACTTGTGGCCACCTCTTGCTCAGCCAGTTGACCCGCAAGGCGTaGGCCACTATGCCATCTACG +
Preference number: 5 (lower is better)
Translates to: STHSPVPTQTCGHLLLSQLTRKA*ATMPST
Trigger: CGTAGATGGCATAGTGGCCAACGCCTTGCGGGTCAA...CTGGCTGAGCAAGAGGTGGCCACAAGTCTGGGTGGGCACTGGGCTATGGGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp CCCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCCTGGCCTCTGAGATGCTGTaGTTGCGCTTCCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PQLQSLAHSLATGSLVFLASEML*LRFLSR
Trigger: CCTGGACAGGAAGCGCAACAACAGCATCTCAGAGGC...CAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS TCA 90 bp CTCACTCAAGGCCGAGTTGCTCTGTTCCAGAGGCCGCTTGCGCACTaGGCTGTCAGGGACACCTGTGCTGGGCCGATGTCGCTTCTTATT +
Preference number: 5 (lower is better)
Translates to: LTQGRVALFQRPLAH*AVRDTCAGPMSLLI
Trigger: AATAAGAAGCGACATCGGCCCAGCACAGGTGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCCTTGAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 90 bp TCTGTTCCAGAGGCCGCTTGCGCACTGAGCTGTCAGGGACACCTGTaGTGGGCCGATGTCGCTTCTTATTCTTCACCAGGATACGGCCCA +
Preference number: 5 (lower is better)
Translates to: SVPEAACALSCQGHL*WADVASYSSPGYGP
Trigger: TGGGCCGTATCCTGGTGAAGAATAAGAAGCGACATCGGCCCAGCACAGGTGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 90 bp GTTCCAGAGGCCGCTTGCGCACTGAGCTGTCAGGGACACCTGTGCTaGGCCGATGTCGCTTCTTATTCTTCACCAGGATACGGCCCATCA +
Preference number: 5 (lower is better)
Translates to: VPEAACALSCQGHLC*ADVASYSSPGYGPS
Trigger: TGATGGGCCGTATCCTGGTGAAGAATAAGAAGCGACATCGGCCCAGCACAGGTGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 90 bp GCCTGTCGTAGATGCTCCAGCTTCCGCTTGGTCTCCACATCTGCCTaGGCTTCCCTCAGCTCCAACAGGCTCTGTACTTGTCGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: ACRRCSSFRLVSTSA*ASLSSNRLCTCRFW
Trigger: CCAGAACCGACAAGTACAGAGCCTGTTGGAGCTGAGGGAAGCCCAGGCAGATGTGGAGACCAAGCGGAAGCTGGAGCATCTACGACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 90 bp AGGACTTGCTGTTGCCCTGCCACCAGGCGTTCATGGCGCTGCTTCTaGGCCTCTTCCAGCCGTCTGATGGAGTTTACCGACTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: RTCCCPATRRSWRCF*ASSSRLMEFTDSVM
Trigger: CATCACTGAGTCGGTAAACTCCATCAGACGGCTGGAAGAGGCCCAGAAGCAGCGCCATGAACGCCTGGTGGCAGGGCAACAGCAAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp CTCTGGTGTTCCTGGCTGGTCCCAGGCTCAGAGCATGTCCTCCGGCTGGTGAAGAACTCTCGATACTGTTaGGCCTCCTCTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LWCSWLVPGSEHVLRLVKNSRYC*ASSSSF
Trigger: GAAGGAGGAAGAGGAGGCCAAACAGTATCGAGAGTT...CTTCACCAGCCGGAGGACATGCTCTGAGCCTGGGACCAGCCAGGAACACCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp ACACTTCATTGGCAGGAGATAAGCCCAGATAAGAGGCTGCCTTCCTCCGAGGGGAGCTGGGCCAGCAGCTaGGGTTCCTCTTCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: TLHWQEISPDKRLPSSEGSWASS*GSSSSS
Trigger: GCTAGAGGAAGAGGAACCCAAGCTGCTGGCCCAGCT...CCCCTCGGAGGAAGGCAGCCTCTTATCTGGGCTTATCTCCTGCCAATGAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS TCA 90 bp TCTGGTCGCGCTCCAGGAACTGTTTGTTCGTCTCGTACTTCTCAATaGGCAGCCGAGCCTGTGAGGACCGAAGTGGCGGGTACAGCACTT +
Preference number: 5 (lower is better)
Translates to: SGRAPGTVCSSRTSQ*AAEPVRTEVAGTAL
Trigger: AAGTGCTGTACCCGCCACTTCGGTCCTCACAGGCTCGGCTGCTCATTGAGAAGTACGAGACGAACAAACAGTTCCTGGAGCGCGACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS TCA 90 bp CTCGAAGGACTTGAACTTGACGGGCTCAACGTAGTTGACGAGCGTTaGCATCTCCTCCGTGGCATTGACCTCACTGCTGGCTGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LEGLELDGLNVVDER*HLLRGIDLTAGCAL
Trigger: GAGGGCACAGCCAGCAGTGAGGTCAATGCCACGGAGGAGATGTCAACGCTCGTCAACTACGTTGAGCCCGTCAAGTTCAAGTCCTTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 90 bp GGGCTTGAGCAAGTACCCGCTGCGCCCATTGTACTCAAACACGCCTaGGTTGAGCTGCATTGGCAAATCCAAGGTCTGGAAGTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GLEQVPAAPIVLKHA*VELHWQIQGLEVEG
Trigger: GCCCTCAACTTCCAGACCTTGGATTTGCCAATGCAGCTCAACGCAGGCGTGTTTGAGTACAATGGGCGCAGCGGGTACTTGCTCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCTGCCCCGAAATCACCTaGACCCGCAAGGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: VAFYYPELQGSTSCSLGICPEIT*TRKALA
Trigger: GGCCAACGCCTTGCGGGTCAAGGTGATTTCGGGGCA...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp CCCAGCTGCAGAGCTTGGCCCATTCTCTTGCCACAGGGTCTCTGGTGTTCCTGGTGTTTCTCCCTTGTCTaGGCCTCTGAGATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PSCRAWPILLPQGLWCSWCFSLV*ASEMLL
Trigger: CAACAGCATCTCAGAGGCCAAGACAAGGGAGAAACA...CCAGGAACACCAGAGACCCTGTGGCAAGAGAATGGGCCAAGCTCTGCAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp CATGGGAGGGGGTGGCCCCACAACAGGGCCTCAAGGAGTAGGTCAGACTTGAAGTCTTGTGTTTCTCCCTaGTCTTGGCCTCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: HGRGWPHNRASRSRSDLKSCVSP*SWPLRC
Trigger: GCATCTCAGAGGCCAAGACAAGGGAGAAACACAAGA...CTTCAAGTCTGACCTACTCCTTGAGGCCCTGTTGTGGGGCCACCCCCTCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS TCA 90 bp GAACTGTTTGTTCGTCTCGTACTTCTCAATGAGCAGCCGAGCCTGTaGGGACCGAAGTGGCGGGTACAGCACTTCGTTGAGTCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: ELFVRLVLLNEQPSL*GPKWRVQHFVESRV
Trigger: GACCCGAGACTCAACGAAGTGCTGTACCCGCCACTTCGGTCCTCACAGGCTCGGCTGCTCATTGAGAAGTACGAGACGAACAAACAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 90 bp CCAACAGGCTCTGTACTTGTCGGTTCTGGAACTCTCGATACTGTTTaGCCTCCTCTTCCTCCTTCACGTCCTCCGAGTTGGTGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: PTGSVLVGSGTLDTV*PPLPPSRPPSWWPC
Trigger: GCAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAGAGGAGGCCAAACAGTATCGAGAGTTCCAGAACCGACAAGTACAGAGCCTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS TCA 90 bp GCACAACCTTGGGGAAGTCAAAGGGTTCCTCGTCCCACACAGGGTTaGATGAGTTCCCCTGGGATGTCCGGGTACGATATTTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: AQPWGSQRVPRPTQG*MSSPGMSGYDICVL
Trigger: CAAGACGCAAATATCGTACCCGGACATCCCAGGGGAACTCATTCAACCCTGTGTGGGACGAGGAACCCTTTGACTTCCCCAAGGTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 90 bp TTGAGTCTCGGGTCTCTCTGCTTCTGGTTGATAAAGTCCATGAGCTaGTCCAGAGTGAGGTACGGCTTGCCCTTGGCACCTATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LSLGSLCFWLIKSMS*SRVRYGLPLAPISS
Trigger: GCTGGAGATAGGTGCCAAGGGCAAGCCGTACCTCACTCTGGAGCAGCTCATGGACTTTATCAACCAGAAGCAGAGAGACCCGAGACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 90 bp GACCGAAGTGGCGGGTACAGCACTTCGTTGAGTCTCGGGTCTCTCTaGTTCTGGTTGATAAAGTCCATGAGCTGCTCCAGAGTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: DRSGGYSTSLSLGSL*FWLIKSMSCSRVRY
Trigger: GTACCTCACTCTGGAGCAGCTCATGGACTTTATCAACCAGAAGCAGAGAGACCCGAGACTCAACGAAGTGCTGTACCCGCCACTTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 90 bp AGTGGCGGGTACAGCACTTCGTTGAGTCTCGGGTCTCTCTGCTTCTaGTTGATAAAGTCCATGAGCTGCTCCAGAGTGAGGTACGGCTTG +
Preference number: 5 (lower is better)
Translates to: SGGYSTSLSLGSLCF*LIKSMSCSRVRYGL
Trigger: CAAGCCGTACCTCACTCTGGAGCAGCTCATGGACTTTATCAACCAGAAGCAGAGAGACCCGAGACTCAACGAAGTGCTGTACCCGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 90 bp GTTCCCCTGGGATGTCCGGGTACGATATTTGCGTCTTGTGTCAACTaGGAGGCCAAACATGTCCACCTCGACGTAGATGCCCACCTTCTT +
Preference number: 5 (lower is better)
Translates to: VPLGCPGTIFASCVN*EAKHVHLDVDAHLL
Trigger: AAGAAGGTGGGCATCTACGTCGAGGTGGACATGTTTGGCCTCCCAGTTGACACAAGACGCAAATATCGTACCCGGACATCCCAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCCAGTACTCAGCCATCTaGGCCTGCTGCTTTGCCGAG +
Preference number: 5 (lower is better)
Translates to: VAFYYPELQGSTSCSLGIQYSAI*ACCFAE
Trigger: CTCGGCAAAGCAGCAGGCCAAGATGGCTGAGTACTG...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp ACACTTCATTGGCAGGAGATAAGCCCAGATAAGAGGCTGCCTTCCTCCGAGGGGCAACAGGCTCTGTACTaGTCGGTTCTGGAACTCTCG +
Preference number: 5 (lower is better)
Translates to: TLHWQEISPDKRLPSSEGQQALY*SVLELS
Trigger: CGAGAGTTCCAGAACCGACAAGTACAGAGCCTGTTG...CCCCTCGGAGGAAGGCAGCCTCTTATCTGGGCTTATCTCCTGCCAATGAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS-3UTR CAA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGCCTCTGAGATGCTGTaGTTGCGCTTCCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWASEML*LRFLSR
Trigger: CCTGGACAGGAAGCGCAACAACAGCATCTCAGAGGC...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAAAGCTGGGCCAGCAGCTaGGGTTCCTCTTCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: GECYGVQALALSLGLKLESWASS*GSSSSS
Trigger: GCTAGAGGAAGAGGAACCCAAGCTGCTGGCCCAGCT...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS TCA 90 bp AACCTTGGGGAAGTCAAAGGGTTCCTCGTCCCACACAGGGTTGAATaGGTTCCCCTGGGATGTCCGGGTACGATATTTGCGTCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: NLGEVKGFLVPHRVE*VPLGCPGTIFASCV
Trigger: GACACAAGACGCAAATATCGTACCCGGACATCCCAGGGGAACTCATTCAACCCTGTGTGGGACGAGGAACCCTTTGACTTCCCCAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 90 bp ATCTTGCACGGCCATGAAGTTCAAGAATGTGGTATTTACTGGATCTaGCCCGGCCACCACTGTCATCAGTTTCTCCTCCAGCCGGGTGTC +
Preference number: 5 (lower is better)
Translates to: ILHGHEVQECGIYWI*PGHHCHQFLLQPGV
Trigger: GACACCCGGCTGGAGGAGAAACTGATGACAGTGGTGGCCGGGCCAGATCCAGTAAATACCACATTCTTGAACTTCATGGCCGTGCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 90 bp AAGTCAAAGGGTTCCTCGTCCCACACAGGGTTGAATGAGTTCCCCTaGGATGTCCGGGTACGATATTTGCGTCTTGTGTCAACTGGGAGG +
Preference number: 5 (lower is better)
Translates to: KSKGSSSHTGLNEFP*DVRVRYLRLVSTGR
Trigger: CCTCCCAGTTGACACAAGACGCAAATATCGTACCCGGACATCCCAGGGGAACTCATTCAACCCTGTGTGGGACGAGGAACCCTTTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 90 bp ATCTTCAGAATGTTCTTGACCGGAATCCGTCCATCCTGGTTCACCTaGAGCTTCAGCTTCGTGTATGCTTTCCGCAGGAAGGTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: IFRMFLTGIRPSWFT*SFSFVYAFRRKVFR
Trigger: CCGGAACACCTTCCTGCGGAAAGCATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGGACGGATTCCGGTCAAGAACATTCTGAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS GCA 90 bp TGGGCCTCTTCCAGCCGTCTGATGGAGTTTACCGACTCAGTGATGTaGCGCCGATTAATCTCTGTCAGTTCCACCTCCTTCTTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: WASSSRLMEFTDSVM*RRLISVSSTSFLCF
Trigger: GAAACACAAGAAGGAGGTGGAACTGACAGAGATTAATCGGCGGCACATCACTGAGTCGGTAAACTCCATCAGACGGCTGGAAGAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 90 bp TGTGTCATCTTGCACGGCCATGAAGTTCAAGAATGTGGTATTTACTaGATCTGGCCCGGCCACCACTGTCATCAGTTTCTCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: CVILHGHEVQECGIY*IWPGHHCHQFLLQP
Trigger: CGGCTGGAGGAGAAACTGATGACAGTGGTGGCCGGGCCAGATCCAGTAAATACCACATTCTTGAACTTCATGGCCGTGCAAGATGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 90 bp GCCGAGAACATCTTCAGAATGTTCTTGACCGGAATCCGTCCATCCTaGTTCACCTGCAGCTTCAGCTTCGTGTATGCTTTCCGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: AENIFRMFLTGIRPS*FTCSFSFVYAFRRK
Trigger: CTTCCTGCGGAAAGCATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGGACGGATTCCGGTCAAGAACATTCTGAAGATGTTCTCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CCA 90 bp CTTGATGGGGTTAATCAAGGCCTCCGCATAGTCCTGGTGGTCATCTaGGATGTAGTCAGAAGCTTCAGTGTAGATAAGCAGGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LDGVNQGLRIVLVVI*DVVRSFSVDKQGRQ
Trigger: CTGCCTGCCCTGCTTATCTACACTGAAGCTTCTGACTACATCCCAGATGACCACCAGGACTATGCGGAGGCCTTGATTAACCCCATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp GTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGGAATCAGTTGCTCCATTGCCTaGGTCTCCACGAAGGATGAC +
Preference number: 5 (lower is better)
Translates to: VAFYYPELQGSTSCSLGISCSIA*VSTKDD
Trigger: GTCATCCTTCGTGGAGACCAAGGCAATGGAGCAACT...GATTCCCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGAAGGGATCAAAAGACTaGTCCGGCCGCCGCATAAAC +
Preference number: 5 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWKGSKD*SGRRIN
Trigger: GTTTATGCGGCGGCCGGACAAGTCTTTTGATCCCTT...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTTTCACGTCCTCCGAGTaGGTGGCCTTGCCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAAFTSSE*VALPRA
Trigger: TGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAA...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 90 bp TGTGTCATCTTGCACGGCCATGAAGTTCAAGAATGTGGTATTTACTaGATCTGGCCCGGCCACCACTGTCATCAGTTTCTCCTCGTCCCA +
Preference number: 5 (lower is better)
Translates to: CVILHGHEVQECGIY*IWPGHHCHQFLLVP
Trigger: TGGGACGAGGAGAAACTGATGACAGTGGTGGCCGGGCCAGATCCAGTAAATACCACATTCTTGAACTTCATGGCCGTGCAAGATGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237074.2
CDS-3UTR CAA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGTCTCCACCCGCTTCTaGTCCGCCGAGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAVSTRF*SAENIF
Trigger: GAAGATGTTCTCGGCGGACAAGAAGCGGGTGGAGAC...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTATCACTTCGGTTGAAGTaGAGGCCACAGGACTCCAGC +
Preference number: 5 (lower is better)
Translates to: LGECYGVQALALSLGLKLSLRLK*RPQDSS
Trigger: GCTGGAGTCCTGTGGCCTCAACTTCAACCGAAGTGA...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAAATCTCCAGCAGGATCTaGTCAATATCCGGGCGCAGA +
Preference number: 5 (lower is better)
Translates to: GECYGVQALALSLGLKLEISSRI*SISGRR
Trigger: TCTGCGCCCGGATATTGACAAGATCCTGCTGGAGAT...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCAAGGTACGGCTTGCCCTaGGCACCTATCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPRYGLP*APISSR
Trigger: CCTGCTGGAGATAGGTGCCAAGGGCAAGCCGTACCT...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTATCTCCTCCGTGGCATaGACCTCACTGCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAISSVA*TSLLAV
Trigger: CACAGCCAGCAGTGAGGTCAATGCCACGGAGGAGAT...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp GGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGAAAGGACTCTTGGTCAGTaGCTCCATTGCCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GECYGVQALALSLGLKLERTLGQ*LHCLGL
Trigger: GAGACCAAGGCAATGGAGCAACTGACCAAGAGTCCT...TTCTAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCATACCCGCTGCGCCCATaGTACTCAAACACGCCTGCG +
Preference number: 5 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPYPLRP*YSNTPA
Trigger: CGCAGGCGTGTTTGAGTACAATGGGCGCAGCGGGTA...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCGCATAAACTCGGGCTaGAGCAAGTACCCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAARINSG*SKYPLR
Trigger: GCGCAGCGGGTACTTGCTCAAGCCCGAGTTTATGCG...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCAGCCTCCTCGTCCCATTaGATGAACTTACTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPASSSH*MNLLPR
Trigger: GCGCGGGAGTAAGTTCATCAAATGGGACGAGGAGGC...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGTGTCCACCTCCATGTaGGGTCCTGTCCAGTACAAG +
Preference number: 5 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAVSTSM*GPVQYK
Trigger: CTTGTACTGGACAGGACCCAACATGGAGGTGGACAC...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTCCTTGGAGCTCCTTCAGCCTCTaGAACTGTGTTGTGTGTGTA +
Preference number: 5 (lower is better)
Translates to: KGLLSTTQNSRVPLAAPWSSFSL*NCVVCV
Trigger: TACACACACAACACAGTTCAAGAGGCTGAAGGAGCT...CCAAGGAGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 90 bp ATCTTGCACGGCCATGAAGTTCAAGAATGTGGTATTTACTGGATCTaGCCCGGCCACCACTGTCATCAGTTTCTCCTCGTCCCATTTGAT +
Preference number: 5 (lower is better)
Translates to: ILHGHEVQECGIYWI*PGHHCHQFLLVPFD
Trigger: ATCAAATGGGACGAGGAGAAACTGATGACAGTGGTGGCCGGGCCAGATCCAGTAAATACCACATTCTTGAACTTCATGGCCGTGCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237074.2
CDS-3UTR CAA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCATCTTGGCCTGCTGCTTaGCCGAGTCGACATGGTTCT +
Preference number: 5 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPSWPAA*PSRHGS
Trigger: AGAACCATGTCGACTCGGCAAAGCAGCAGGCCAAGA...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCATGGTCAGTTGCTCCATaGCCTTGGTCTCCACGAAGG +
Preference number: 5 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPWSVAP*PWSPRR
Trigger: CCTTCGTGGAGACCAAGGCAATGGAGCAACTGACCA...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAAACTCCATAGGACTCTaGGTCAGTTGCTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: LGECYGVQALALSLGLKLNSIGL*VSCSIA
Trigger: GGCAATGGAGCAACTGACCAAGAGTCCTATGGAGTT...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTACGGCTGAGCTGCTGTTaGTTGTATTCCACAAACTCC +
Preference number: 5 (lower is better)
Translates to: LGECYGVQALALSLGLKLRLSCC*LYSTNS
Trigger: GGAGTTTGTGGAATACAACAAACAGCAGCTCAGCCG...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTTCAAACACGCCTGCGTaGAGCTGCATTGGCAAATCC +
Preference number: 5 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLASNTPA*SCIGKS
Trigger: GGATTTGCCAATGCAGCTCAACGCAGGCGTGTTTGA...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTTCGTCCCACACAGGGTaGAATGAGTTCCCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAASSHTG*NEFPWD
Trigger: ATCCCAGGGGAACTCATTCAACCCTGTGTGGGACGA...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACGGTGCCCAACAAATTaGCCACCCTCCTCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPRCPTN*PPSSKA
Trigger: AGCCTTTGAGGAGGGTGGCAAATTTGTTGGGCACCG...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTCAACAGGCTCTGTACTaGTCGGTTCTGGAACTCTCG +
Preference number: 5 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLAQQALY*SVLELS
Trigger: CGAGAGTTCCAGAACCGACAAGTACAGAGCCTGTTG...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp GCTTTCCTACCCGATCTGTTTGCCTGGGGCTGCAACAAAAACAAAGCAAAGCAAAGCTCCTTCAGCCTCTaGAACTGTGTTGTGTGTGTA +
Preference number: 5 (lower is better)
Translates to: AFLPDLFAWGCNKNKAKQSSFSL*NCVVCV
Trigger: TACACACACAACACAGTTCAAGAGGCTGAAGGAGCT...TTGCTTTGCTTTGTTTTTGTTGCAGCCCCAGGCAAACAGATCGGGTAGGAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237808.2
CDS GCA 90 bp GCCAGTTTAAACAACTCCTCTGACCAGACCTTGACTGTGTCATCTTaGACGGCCATGAAGTTCAAGAATGTGGTATTTACTGGATCTGGC +
Preference number: 5 (lower is better)
Translates to: ASLNNSSDQTLTVSS*TAMKFKNVVFTGSG
Trigger: GCCAGATCCAGTAAATACCACATTCTTGAACTTCATGGCCGTGCAAGATGACACAGTCAAGGTCTGGTCAGAGGAGTTGTTTAAACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS-3UTR CAA 90 bp CCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTCTTGACTGTGTCATCTaGCACGGCCATGAAGTTCAA +
Preference number: 5 (lower is better)
Translates to: PKYKGLLSTTQNSRVPLALDCVI*HGHEVQ
Trigger: TTGAACTTCATGGCCGTGCAAGATGACACAGTCAAG...AGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCACTAGCTGCTAACTCTCGATACTGTTaGGCCTCCTCTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KYKGLLSTTQNSRVPLAANSRYC*ASSSSF
Trigger: GAAGGAGGAAGAGGAGGCCAAACAGTATCGAGAGTT...AGCAGCTAGTGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCATGTTTCTCCCTTGTCTaGGCCTCTGAGATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPCFSLV*ASEMLL
Trigger: CAACAGCATCTCAGAGGCCAAGACAAGGGAGAAACA...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp AAACTCCCCAAATATAAAGGGTTGCTTTCTACTACCCAGAACTCCAGGGTTCCATCTTGTGTTTCTCCCTaGTCTTGGCCTCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: KLPKYKGLLSTTQNSRVPSCVSP*SWPLRC
Trigger: GCATCTCAGAGGCCAAGACAAGGGAGAAACACAAGA...TGGAACCCTGGAGTTCTGGGTAGTAGAAAGCAACCCTTTATATTTGGGGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS-3UTR CAA 90 bp TTAGGTGAATGTTATGGGGTACAAGCCCTAGCCCTTTCCCTAGGCCTGAAGTTAGTGTTGTGTGAGGAGTaGATAAAATATGCGCTCAGT +
Preference number: 5 (lower is better)
Translates to: LGECYGVQALALSLGLKLVLCEE*IKYALS
Trigger: ACTGAGCGCATATTTTATCAACTCCTCACACAACAC...TAACTTCAGGCCTAGGGAAAGGGCTAGGGCTTGTACCCCATAACATTCACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 72 bp TCACGTCCTCCGAGTTGGTGGCCTTGCCCAGGGCACTaGGGGAGGGCCGGCACTTCCCCTCAGCCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: SRPPSWWPCPGH*GRAGTSPQPWP
Trigger: AGGCCAGGGCTGAGGGGAAGTGCCGGCCCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS TCA 72 bp CCCTGGCCTGGGCCAGGCCATCCAGAAGGCGGCGGGTaGGGGCCACAGCCTTGCGCTGGTGCTTCTTATGCA +
Preference number: 6 (lower is better)
Translates to: PWPGPGHPEGGG*GPQPCAGASYA
Trigger: TGCATAAGAAGCACCAGCGCAAGGCTGTGGCCCTCACCCGCCGCCTTCTGGATGGCCTGGCCCAGGCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS TCA 72 bp TCAGCGCTGGACAGGTGCCCACCACTCCCAGGTGCATaGCCATTGCTGGCACAGGCCACCAGGGGGCCGTCC +
Preference number: 6 (lower is better)
Translates to: SALDRCPPLPGA*PLLAQATRGPS
Trigger: GGACGGCCCCCTGGTGGCCTGTGCCAGCAATGGTCATGCACCTGGGAGTGGTGGGCACCTGTCCAGCGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS GCA 72 bp CCTCTTCCTCCTTCACGTCCTCCGAGTTGGTGGCCTTaGCCAGGGCACTGGGGGAGGGCCGGCACTTCCCCT +
Preference number: 6 (lower is better)
Translates to: PLPPSRPPSWWP*PGHWGRAGTSP
Trigger: AGGGGAAGTGCCGGCCCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 72 bp TGGCCTCCTCTTCCTCCTTCACGTCCTCCGAGTTGGTaGCCTTGCCCAGGGCACTGGGGGAGGGCCGGCACT +
Preference number: 6 (lower is better)
Translates to: WPPLPPSRPPSW*PCPGHWGRAGT
Trigger: AGTGCCGGCCCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAGAGGAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 72 bp GTTTGGCCTCCTCTTCCTCCTTCACGTCCTCCGAGTTaGTGGCCTTGCCCAGGGCACTGGGGGAGGGCCGGC +
Preference number: 6 (lower is better)
Translates to: VWPPLPPSRPPS*WPCPGHWGRAG
Trigger: GCCGGCCCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAGAGGAGGCCAAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 72 bp TCCTCTTCCTCCTTCACGTCCTCCGAGTTGGTGGCCTaGCCCAGGGCACTGGGGGAGGGCCGGCACTTCCCC +
Preference number: 6 (lower is better)
Translates to: SSSSFTSSELVA*PRALGEGRHFP
Trigger: GGGGAAGTGCCGGCCCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 90 bp GCCTGGGCCAGGCCATCCAGAAGGCGGCGGGTGAGGGCCACAGCCTaGCGCTGGTGCTTCTTATGCAACTCCCGCAGGTCTCGATCCTGC +
Preference number: 6 (lower is better)
Translates to: AWARPSRRRRVRATA*RWCFLCNSRRSRSC
Trigger: GCAGGATCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCGCAAGGCTGTGGCCCTCACCCGCCGCCTTCTGGATGGCCTGGCCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 90 bp TGTTTGGCCTCCTCTTCCTCCTTCACGTCCTCCGAGTTGGTGGCCTaGCCCAGGGCACTGGGGGAGGGCCGGCACTTCCCCTCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: CLASSSSFTSSELVA*PRALGEGRHFPSAL
Trigger: CAGGGCTGAGGGGAAGTGCCGGCCCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAGAGGAGGCCAAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS GCA 72 bp CCAGGCTGGTCTTCTCGAGTCCCACCTCCTCCCCATTaGTTAGGCCAGGGCAGCTGTCGGAGCTGGGGGACC +
Preference number: 6 (lower is better)
Translates to: PGWSSRVPPPPH*LGQGSCRSWGT
Trigger: GGTCCCCCAGCTCCGACAGCTGCCCTGGCCTAAGCAATGGGGAGGAGGTGGGACTCGAGAAGACCAGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 72 bp CCTCCCCATTGCTTAGGCCAGGGCAGCTGTCGGAGCTaGGGGACCCAAGCTGAGGTGAGGAGGGCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: PPHCLGQGSCRS*GTQAEVRRALW
Trigger: CCACAGAGCCCTCCTCACCTCAGCTTGGGTCCCCCAGCTCCGACAGCTGCCCTGGCCTAAGCAATGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS TCA 72 bp GGCCGAGTTGCTCTGTTCCAGAGGCCGCTTGCGCACTaGGCTGTCAGGGACACCTGTGCTGGGCCGATGTCG +
Preference number: 6 (lower is better)
Translates to: GRVALFQRPLAH*AVRDTCAGPMS
Trigger: CGACATCGGCCCAGCACAGGTGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 72 bp CGGGTGAGGGCCACAGCCTTGCGCTGGTGCTTCTTATaGAACTCCCGCAGGTCTCGATCCTGCCGGCTCCGT +
Preference number: 6 (lower is better)
Translates to: RVRATALRWCFL*NSRRSRSCRLR
Trigger: ACGGAGCCGGCAGGATCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCGCAAGGCTGTGGCCCTCACCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 72 bp GGCTCTGTGGCGGCCGAGCTCTCACTCAAGGCCGAGTaGCTCTGTTCCAGAGGCCGCTTGCGCACTGAGCTG +
Preference number: 6 (lower is better)
Translates to: GSVAAELSLKAE*LCSRGRLRTEL
Trigger: CAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCCTTGAGTGAGAGCTCGGCCGCCACAGAGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CAA 90 bp GCCGAGCTCTCACTCAAGGCCGAGTTGCTCTGTTCCAGAGGCCGCTaGCGCACTGAGCTGTCAGGGACACCTGTGCTGGGCCGATGTCGC +
Preference number: 6 (lower is better)
Translates to: AELSLKAELLCSRGR*RTELSGTPVLGRCR
Trigger: GCGACATCGGCCCAGCACAGGTGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCCTTGAGTGAGAGCTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CAA 90 bp GGTGAGGAGGGCTCTGTGGCGGCCGAGCTCTCACTCAAGGCCGAGTaGCTCTGTTCCAGAGGCCGCTTGCGCACTGAGCTGTCAGGGACA +
Preference number: 6 (lower is better)
Translates to: GEEGSVAAELSLKAE*LCSRGRLRTELSGT
Trigger: TGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCCTTGAGTGAGAGCTCGGCCGCCACAGAGCCCTCCTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CAA 90 bp TCTCGATACTGTTTGGCCTCCTCTTCCTCCTTCACGTCCTCCGAGTaGGTGGCCTTGCCCAGGGCACTGGGGGAGGGCCGGCACTTCCCC +
Preference number: 6 (lower is better)
Translates to: SRYCLASSSSFTSSE*VALPRALGEGRHFP
Trigger: GGGGAAGTGCCGGCCCTCCCCCAGTGCCCTGGGCAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAGAGGAGGCCAAACAGTATCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS TCA 72 bp GCCCCACAGCAGTGCCTGGCGGTACATCTCCACCGATaGTGGTCCAGCCAGCTGGCCCGCAGTGAGATAGGT +
Preference number: 6 (lower is better)
Translates to: APQQCLAVHLHR*WSSQLARSEIG
Trigger: ACCTATCTCACTGCGGGCCAGCTGGCTGGACCATCATCGGTGGAGATGTACCGCCAGGCACTGCTGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS TCA 72 bp CGACGGATCTCCTGGGGCAACCTCTCTCGCTGTTCCTaGCACTCCTGGGTCAGCTGGGCCAGCAGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: RRISWGNLSRCS*HSWVSWASSLG
Trigger: ACCCAAGCTGCTGGCCCAGCTGACCCAGGAGTGTCAGGAACAGCGAGAGAGGTTGCCCCAGGAGATCCGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS GCA 72 bp CACTCAAGGCCGAGTTGCTCTGTTCCAGAGGCCGCTTaGGCACTGAGCTGTCAGGGACACCTGTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: HSRPSCSVPEAA*ALSCQGHLCWA
Trigger: GGCCCAGCACAGGTGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCCTTGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 72 bp GCTCTGTGGCGGCCGAGCTCTCACTCAAGGCCGAGTTaGTCTGTTCCAGAGGCCGCTTGCGCACTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: ALWRPSSHSRPS*SVPEAACALSC
Trigger: ACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCCTTGAGTGAGAGCTCGGCCGCCACAGAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 72 bp AGAAGGCGGCGGGTGAGGGCCACAGCCTTGCGCTGGTaGTTCTTATGCAACTCCCGCAGGTCTCGATCCTGC +
Preference number: 6 (lower is better)
Translates to: RRRRVRATALRW*FLCNSRRSRSC
Trigger: GCAGGATCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCGCAAGGCTGTGGCCCTCACCCGCCGCCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 72 bp TCCAGAAGGCGGCGGGTGAGGGCCACAGCCTTGCGCTaGTGCTTCTTATGCAACTCCCGCAGGTCTCGATCC +
Preference number: 6 (lower is better)
Translates to: SRRRRVRATALR*CFLCNSRRSRS
Trigger: GGATCGAGACCTGCGGGAGTTGCATAAGAAGCACCAGCGCAAGGCTGTGGCCCTCACCCGCCGCCTTCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 72 bp AGGCCATCCAGAAGGCGGCGGGTGAGGGCCACAGCCTaGCGCTGGTGCTTCTTATGCAACTCCCGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: RPSRRRRVRATA*RWCFLCNSRRS
Trigger: AGACCTGCGGGAGTTGCATAAGAAGCACCAGCGCAAGGCTGTGGCCCTCACCCGCCGCCTTCTGGATGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 90 bp GGATCTGGCCCGGCCACCACTGTCATCAGTTTCTCCTCGTCCCATTaGATGAACTTACTCCCGCGCCGCAGGGTCTCCACCACGGTGGGC +
Preference number: 6 (lower is better)
Translates to: GSGPATTVISFSSSH*MNLLPRRRVSTTVG
Trigger: GCCCACCGTGGTGGAGACCCTGCGGCGCGGGAGTAAGTTCATCAAATGGGACGAGGAGAAACTGATGACAGTGGTGGCCGGGCCAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237074.2
CDS GCA 72 bp AGCTGGGCCAGCAGCTTGGGTTCCTCTTCCTCTAGCTaGTGGAGGACTTGCTGTTGCCCTGCCACCAGGCGT +
Preference number: 6 (lower is better)
Translates to: SWASSLGSSSSS*WRTCCCPATRR
Trigger: ACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCAGCTAGAGGAAGAGGAACCCAAGCTGCTGGCCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 72 bp TGGAGGACTTGCTGTTGCCCTGCCACCAGGCGTTCATaGCGCTGCTTCTGGGCCTCTTCCAGCCGTCTGATG +
Preference number: 6 (lower is better)
Translates to: WRTCCCPATRRS*RCFWASSSRLM
Trigger: CATCAGACGGCTGGAAGAGGCCCAGAAGCAGCGCCATGAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 72 bp TCACTCAAGGCCGAGTTGCTCTGTTCCAGAGGCCGCTaGCGCACTGAGCTGTCAGGGACACCTGTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SLKAELLCSRGR*RTELSGTPVLG
Trigger: GCCCAGCACAGGTGTCCCTGACAGCTCAGTGCGCAAGCGGCCTCTGGAACAGAGCAACTCGGCCTTGAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 72 bp AGCTTGGGTTCCTCTTCCTCTAGCTGCTGGAGGACTTaGTGTTGCCCTGCCACCAGGCGTTCATGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: SLGSSSSSCWRT*CCPATRRSWRC
Trigger: GCAGCGCCATGAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCAGCTAGAGGAAGAGGAACCCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 72 bp TGGGCCAGCAGCTTGGGTTCCTCTTCCTCTAGCTGCTaGAGGACTTGCTGTTGCCCTGCCACCAGGCGTTCA +
Preference number: 6 (lower is better)
Translates to: WASSLGSSSSSC*RTCCCPATRRS
Trigger: TGAACGCCTGGTGGCAGGGCAACAGCAAGTCCTCCAGCAGCTAGAGGAAGAGGAACCCAAGCTGCTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 90 bp TCCCGCAGGTCTCGATCCTGCCGGCTCCGTAGCTTCACCATAGCCTaGTGGCTTCTGAGCTCCTCTAGAGGTGTAGGGGTCACCTCAGAG +
Preference number: 6 (lower is better)
Translates to: SRRSRSCRLRSFTIA*WLLSSSRGVGVTSE
Trigger: CTCTGAGGTGACCCCTACACCTCTAGAGGAGCTCAGAAGCCACAAGGCTATGGTGAAGCTACGGAGCCGGCAGGATCGAGACCTGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS GCA 72 bp GCCCAACAAATTTGCCACCCTCCTCAAAGGCTGCGATaGGAAGTGAGGCCAGCGTGGGCAGCACAACCTTGG +
Preference number: 6 (lower is better)
Translates to: AQQICHPPQRLR*EVRPAWAAQPW
Trigger: CCAAGGTTGTGCTGCCCACGCTGGCCTCACTTCGCATCGCAGCCTTTGAGGAGGGTGGCAAATTTGTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 72 bp ACTTGCTGTTGCCCTGCCACCAGGCGTTCATGGCGCTaGTTCTGGGCCTCTTCCAGCCGTCTGATGGAGTTT +
Preference number: 6 (lower is better)
Translates to: TCCCPATRRSWR*FWASSSRLMEF
Trigger: AAACTCCATCAGACGGCTGGAAGAGGCCCAGAAGCAGCGCCATGAACGCCTGGTGGCAGGGCAACAGCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 72 bp CGATCCTGCCGGCTCCGTAGCTTCACCATAGCCTTGTaGCTTCTGAGCTCCTCTAGAGGTGTAGGGGTCACC +
Preference number: 6 (lower is better)
Translates to: RSCRLRSFTIAL*LLSSSRGVGVT
Trigger: GGTGACCCCTACACCTCTAGAGGAGCTCAGAAGCCACAAGGCTATGGTGAAGCTACGGAGCCGGCAGGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 72 bp AACTCATCAGGGCGAATGGACTCACTTCGGTTGAAGTaGAGGCCACAGGACTCCAGCGCCGTCTCCACCCGC +
Preference number: 6 (lower is better)
Translates to: NSSGRMDSLRLK*RPQDSSAVSTR
Trigger: GCGGGTGGAGACGGCGCTGGAGTCCTGTGGCCTCAACTTCAACCGAAGTGAGTCCATTCGCCCTGATGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CAA 72 bp CCGGCCACCACTGTCATCAGTTTCTCCTCGTCCCATTaGATGAACTTACTCCCGCGCCGCAGGGTCTCCACC +
Preference number: 6 (lower is better)
Translates to: PATTVISFSSSH*MNLLPRRRVST
Trigger: GGTGGAGACCCTGCGGCGCGGGAGTAAGTTCATCAAATGGGACGAGGAGAAACTGATGACAGTGGTGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237074.2
CDS CAA 90 bp AGGTCCTGTGGACTAGGCAGGGGGATGCCCGCAGATAGCGGGTATTaGTCGAGAGGGTCAATGAGCAGCGCATCCCCAAAGATAGAGCGG +
Preference number: 6 (lower is better)
Translates to: RSCGLGRGMPADSGY*SRGSMSSASPKIER
Trigger: CCGCTCTATCTTTGGGGATGCGCTGCTCATTGACCCTCTCGACAAATACCCGCTATCTGCGGGCATCCCCCTGCCTAGTCCACAGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CAA 90 bp CCTGAGCGGATAGCAGAGACAGGCAGGATACGGTGCCCAACAAATTaGCCACCCTCCTCAAAGGCTGCGATGCGAAGTGAGGCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: PERIAETGRIRCPTN*PPSSKAAMRSEASV
Trigger: CACGCTGGCCTCACTTCGCATCGCAGCCTTTGAGGAGGGTGGCAAATTTGTTGGGCACCGTATCCTGCCTGTCTCTGCTATCCGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CAA 90 bp GGCCGCCGCATAAACTCGGGCTTGAGCAAGTACCCGCTGCGCCCATaGTACTCAAACACGCCTGCGTTGAGCTGCATTGGCAAATCCAAG +
Preference number: 6 (lower is better)
Translates to: GRRINSGLSKYPLRP*YSNTPALSCIGKSK
Trigger: CTTGGATTTGCCAATGCAGCTCAACGCAGGCGTGTTTGAGTACAATGGGCGCAGCGGGTACTTGCTCAAGCCCGAGTTTATGCGGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CAA 72 bp AGGCCACAGGACTCCAGCGCCGTCTCCACCCGCTTCTaGTCCGCCGAGAACATCTTCAGAATGTTCTTGACC +
Preference number: 6 (lower is better)
Translates to: RPQDSSAVSTRF*SAENIFRMFLT
Trigger: GGTCAAGAACATTCTGAAGATGTTCTCGGCGGACAAGAAGCGGGTGGAGACGGCGCTGGAGTCCTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CAA 72 bp TCTCGATCCTGCCGGCTCCGTAGCTTCACCATAGCCTaGTGGCTTCTGAGCTCCTCTAGAGGTGTAGGGGTC +
Preference number: 6 (lower is better)
Translates to: SRSCRLRSFTIA*WLLSSSRGVGV
Trigger: GACCCCTACACCTCTAGAGGAGCTCAGAAGCCACAAGGCTATGGTGAAGCTACGGAGCCGGCAGGATCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 90 bp GGCGGGTACAGCACTTCGTTGAGTCTCGGGTCTCTCTGCTTCTGGTaGATAAAGTCCATGAGCTGCTCCAGAGTGAGGTACGGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: GGYSTSLSLGSLCFW*IKSMSCSRVRYGLP
Trigger: GGGCAAGCCGTACCTCACTCTGGAGCAGCTCATGGACTTTATCAACCAGAAGCAGAGAGACCCGAGACTCAACGAAGTGCTGTACCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CAA 90 bp AGCAGCCGAGCCTGTGAGGACCGAAGTGGCGGGTACAGCACTTCGTaGAGTCTCGGGTCTCTCTGCTTCTGGTTGATAAAGTCCATGAGC +
Preference number: 6 (lower is better)
Translates to: SSRACEDRSGGYSTS*SLGSLCFWLIKSMS
Trigger: GCTCATGGACTTTATCAACCAGAAGCAGAGAGACCCGAGACTCAACGAAGTGCTGTACCCGCCACTTCGGTCCTCACAGGCTCGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS TCA 72 bp GTTCGTCTCGTACTTCTCAATGAGCAGCCGAGCCTGTaGGGACCGAAGTGGCGGGTACAGCACTTCGTTGAG +
Preference number: 6 (lower is better)
Translates to: VRLVLLNEQPSL*GPKWRVQHFVE
Trigger: CTCAACGAAGTGCTGTACCCGCCACTTCGGTCCTCACAGGCTCGGCTGCTCATTGAGAAGTACGAGACGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS GCA 72 bp TGGTGCTTCTTATGCAACTCCCGCAGGTCTCGATCCTaGCGGCTCCGTAGCTTCACCATAGCCTTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: WCFLCNSRRSRS*RLRSFTIALWL
Trigger: AAGCCACAAGGCTATGGTGAAGCTACGGAGCCGGCAGGATCGAGACCTGCGGGAGTTGCATAAGAAGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 90 bp TTGAAGTTGAGGCCACAGGACTCCAGCGCCGTCTCCACCCGCTTCTaGTCCGCCGAGAACATCTTCAGAATGTTCTTGACCGGAATCCGT +
Preference number: 6 (lower is better)
Translates to: LKLRPQDSSAVSTRF*SAENIFRMFLTGIR
Trigger: ACGGATTCCGGTCAAGAACATTCTGAAGATGTTCTCGGCGGACAAGAAGCGGGTGGAGACGGCGCTGGAGTCCTGTGGCCTCAACTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CAA 90 bp CTCCACATCTGCCTGGGCTTCCCTCAGCTCCAACAGGCTCTGTACTaGTCGGTTCTGGAACTCTCGATACTGTTTGGCCTCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LHICLGFPQLQQALY*SVLELSILFGLLFL
Trigger: GAGGAAGAGGAGGCCAAACAGTATCGAGAGTTCCAGAACCGACAAGTACAGAGCCTGTTGGAGCTGAGGGAAGCCCAGGCAGATGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS TCA 72 bp CTTGAACTTGACGGGCTCAACGTAGTTGACGAGCGTTaGCATCTCCTCCGTGGCATTGACCTCACTGCTGGC +
Preference number: 6 (lower is better)
Translates to: LELDGLNVVDER*HLLRGIDLTAG
Trigger: GCCAGCAGTGAGGTCAATGCCACGGAGGAGATGTCAACGCTCGTCAACTACGTTGAGCCCGTCAAGTTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 72 bp GGGTCTCTCTGCTTCTGGTTGATAAAGTCCATGAGCTaGTCCAGAGTGAGGTACGGCTTGCCCTTGGCACCT +
Preference number: 6 (lower is better)
Translates to: GSLCFWLIKSMS*SRVRYGLPLAP
Trigger: AGGTGCCAAGGGCAAGCCGTACCTCACTCTGGAGCAGCTCATGGACTTTATCAACCAGAAGCAGAGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS GCA 72 bp TATCCTGAGCGGATAGCAGAGACAGGCAGGATACGGTaGCCAACAAATTTGCCACCCTCCTCAAAGGCTGCG +
Preference number: 6 (lower is better)
Translates to: YPERIAETGRIR*PTNLPPSSKAA
Trigger: CGCAGCCTTTGAGGAGGGTGGCAAATTTGTTGGGCACCGTATCCTGCCTGTCTCTGCTATCCGCTCAGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 72 bp CTCTCCCCAATGAGAGCGGCTAGTTGCTTGGCCCGCTaGTCCATTAGGCTTACGTGCTTGATGGGGTTAATC +
Preference number: 6 (lower is better)
Translates to: LSPMRAASCLAR*SIRLTCLMGLI
Trigger: GATTAACCCCATCAAGCACGTAAGCCTAATGGACCAGCGGGCCAAGCAACTAGCCGCTCTCATTGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 72 bp GCCTGTGAGGACCGAAGTGGCGGGTACAGCACTTCGTaGAGTCTCGGGTCTCTCTGCTTCTGGTTGATAAAG +
Preference number: 6 (lower is better)
Translates to: ACEDRSGGYSTS*SLGSLCFWLIK
Trigger: CTTTATCAACCAGAAGCAGAGAGACCCGAGACTCAACGAAGTGCTGTACCCGCCACTTCGGTCCTCACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CAA 72 bp CCCTCCATAGACATCTGGTCGCGCTCCAGGAACTGTTaGTTCGTCTCGTACTTCTCAATGAGCAGCCGAGCC +
Preference number: 6 (lower is better)
Translates to: PSIDIWSRSRNC*FVSYFSMSSRA
Trigger: GGCTCGGCTGCTCATTGAGAAGTACGAGACGAACAAACAGTTCCTGGAGCGCGACCAGATGTCTATGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CAA 72 bp ATAAACTCGGGCTTGAGCAAGTACCCGCTGCGCCCATaGTACTCAAACACGCCTGCGTTGAGCTGCATTGGC +
Preference number: 6 (lower is better)
Translates to: INSGLSKYPLRP*YSNTPALSCIG
Trigger: GCCAATGCAGCTCAACGCAGGCGTGTTTGAGTACAATGGGCGCAGCGGGTACTTGCTCAAGCCCGAGTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CAA 72 bp TGCCTGGGCTTCCCTCAGCTCCAACAGGCTCTGTACTaGTCGGTTCTGGAACTCTCGATACTGTTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: CLGFPQLQQALY*SVLELSILFGL
Trigger: GAGGCCAAACAGTATCGAGAGTTCCAGAACCGACAAGTACAGAGCCTGTTGGAGCTGAGGGAAGCCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 90 bp CACACAGGGTTGAATGAGTTCCCCTGGGATGTCCGGGTACGATATTaGCGTCTTGTGTCAACTGGGAGGCCAAACATGTCCACCTCGACG +
Preference number: 6 (lower is better)
Translates to: HTGLNEFPWDVRVRY*RLVSTGRPNMSTST
Trigger: CGTCGAGGTGGACATGTTTGGCCTCCCAGTTGACACAAGACGCAAATATCGTACCCGGACATCCCAGGGGAACTCATTCAACCCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CAA 90 bp TCCAACAGGCTCTGTACTTGTCGGTTCTGGAACTCTCGATACTGTTaGGCCTCCTCTTCCTCCTTCACGTCCTCCGAGTTGGTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SNRLCTCRFWNSRYC*ASSSSFTSSELVAL
Trigger: CAAGGCCACCAACTCGGAGGACGTGAAGGAGGAAGAGGAGGCCAAACAGTATCGAGAGTTCCAGAACCGACAAGTACAGAGCCTGTTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS TCA 72 bp TCCAGCCAGCTGGCCCGCAGTGAGATAGGTGTTGTGTaGGGAGTTGATAAAATATGCGCTCAGTGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: SSQLARSEIGVV*GVDKICAQWLG
Trigger: ACCCAGCCACTGAGCGCATATTTTATCAACTCCTCACACAACACCTATCTCACTGCGGGCCAGCTGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS TCA 72 bp GAAGTCAAAGGGTTCCTCGTCCCACACAGGGTTGAATaGGTTCCCCTGGGATGTCCGGGTACGATATTTGCG +
Preference number: 6 (lower is better)
Translates to: EVKGFLVPHRVE*VPLGCPGTIFA
Trigger: CGCAAATATCGTACCCGGACATCCCAGGGGAACTCATTCAACCCTGTGTGGGACGAGGAACCCTTTGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS TCA 72 bp TGGGGAAGTCAAAGGGTTCCTCGTCCCACACAGGGTTaGATGAGTTCCCCTGGGATGTCCGGGTACGATATT +
Preference number: 6 (lower is better)
Translates to: WGSQRVPRPTQG*MSSPGMSGYDI
Trigger: AATATCGTACCCGGACATCCCAGGGGAACTCATTCAACCCTGTGTGGGACGAGGAACCCTTTGACTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 72 bp CTGCGCCCATTGTACTCAAACACGCCTGCGTTGAGCTaGATTGGCAAATCCAAGGTCTGGAAGTTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LRPLYSNTPALS*IGKSKVWKLRA
Trigger: TGCCCTCAACTTCCAGACCTTGGATTTGCCAATGCAGCTCAACGCAGGCGTGTTTGAGTACAATGGGCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 72 bp CAAGTACCCGCTGCGCCCATTGTACTCAAACACGCCTaGGTTGAGCTGCATTGGCAAATCCAAGGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: QVPAAPIVLKHA*VELHWQIQGLE
Trigger: TTCCAGACCTTGGATTTGCCAATGCAGCTCAACGCAGGCGTGTTTGAGTACAATGGGCGCAGCGGGTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 72 bp GGATGTCCGGGTACGATATTTGCGTCTTGTGTCAACTaGGAGGCCAAACATGTCCACCTCGACGTAGATGCC +
Preference number: 6 (lower is better)
Translates to: GCPGTIFASCVN*EAKHVHLDVDA
Trigger: GGCATCTACGTCGAGGTGGACATGTTTGGCCTCCCAGTTGACACAAGACGCAAATATCGTACCCGGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 72 bp GGTTCCTCGTCCCACACAGGGTTGAATGAGTTCCCCTaGGATGTCCGGGTACGATATTTGCGTCTTGTGTCA +
Preference number: 6 (lower is better)
Translates to: GSSSHTGLNEFP*DVRVRYLRLVS
Trigger: TGACACAAGACGCAAATATCGTACCCGGACATCCCAGGGGAACTCATTCAACCCTGTGTGGGACGAGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 72 bp TCCCTCAGCTCCAACAGGCTCTGTACTTGTCGGTTCTaGAACTCTCGATACTGTTTGGCCTCCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLSSNRLCTCRF*NSRYCLASSSS
Trigger: GGAGGAAGAGGAGGCCAAACAGTATCGAGAGTTCCAGAACCGACAAGTACAGAGCCTGTTGGAGCTGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 72 bp TACCCGCTGCGCCCATTGTACTCAAACACGCCTGCGTaGAGCTGCATTGGCAAATCCAAGGTCTGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: YPLRPLYSNTPA*SCIGKSKVWKL
Trigger: CAACTTCCAGACCTTGGATTTGCCAATGCAGCTCAACGCAGGCGTGTTTGAGTACAATGGGCGCAGCGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CAA 72 bp AGTTCCCCTGGGATGTCCGGGTACGATATTTGCGTCTaGTGTCAACTGGGAGGCCAAACATGTCCACCTCGA +
Preference number: 6 (lower is better)
Translates to: SSPGMSGYDICV*CQLGGQTCPPR
Trigger: TCGAGGTGGACATGTTTGGCCTCCCAGTTGACACAAGACGCAAATATCGTACCCGGACATCCCAGGGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CAA 72 bp TTGGGGAAGTCAAAGGGTTCCTCGTCCCACACAGGGTaGAATGAGTTCCCCTGGGATGTCCGGGTACGATAT +
Preference number: 6 (lower is better)
Translates to: LGKSKGSSSHTG*NEFPWDVRVRY
Trigger: ATATCGTACCCGGACATCCCAGGGGAACTCATTCAACCCTGTGTGGGACGAGGAACCCTTTGACTTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CAA 90 bp TTGAGCAAGTACCCGCTGCGCCCATTGTACTCAAACACGCCTGCGTaGAGCTGCATTGGCAAATCCAAGGTCTGGAAGTTGAGGGCAACA +
Preference number: 6 (lower is better)
Translates to: LSKYPLRPLYSNTPA*SCIGKSKVWKLRAT
Trigger: TGTTGCCCTCAACTTCCAGACCTTGGATTTGCCAATGCAGCTCAACGCAGGCGTGTTTGAGTACAATGGGCGCAGCGGGTACTTGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CAA 90 bp AGCACAACCTTGGGGAAGTCAAAGGGTTCCTCGTCCCACACAGGGTaGAATGAGTTCCCCTGGGATGTCCGGGTACGATATTTGCGTCTT +
Preference number: 6 (lower is better)
Translates to: STTLGKSKGSSSHTG*NEFPWDVRVRYLRL
Trigger: AAGACGCAAATATCGTACCCGGACATCCCAGGGGAACTCATTCAACCCTGTGTGGGACGAGGAACCCTTTGACTTCCCCAAGGTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 72 bp ATGTTCTTGACCGGAATCCGTCCATCCTGGTTCACCTaGAGCTTCAGCTTCGTGTATGCTTTCCGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: MFLTGIRPSWFT*SFSFVYAFRRK
Trigger: CTTCCTGCGGAAAGCATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGGACGGATTCCGGTCAAGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS GCA 72 bp TCCAGCCGTCTGATGGAGTTTACCGACTCAGTGATGTaGCGCCGATTAATCTCTGTCAGTTCCACCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSRLMEFTDSVM*RRLISVSSTSF
Trigger: GAAGGAGGTGGAACTGACAGAGATTAATCGGCGGCACATCACTGAGTCGGTAAACTCCATCAGACGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 72 bp ATAAAGTCCATGAGCTGCTCCAGAGTGAGGTACGGCTaGCCCTTGGCACCTATCTCCAGCAGGATCTTGTCA +
Preference number: 6 (lower is better)
Translates to: IKSMSCSRVRYG*PLAPISSRILS
Trigger: TGACAAGATCCTGCTGGAGATAGGTGCCAAGGGCAAGCCGTACCTCACTCTGGAGCAGCTCATGGACTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CAA 72 bp CTCTGTACTTGTCGGTTCTGGAACTCTCGATACTGTTaGGCCTCCTCTTCCTCCTTCACGTCCTCCGAGTTG +
Preference number: 6 (lower is better)
Translates to: LCTCRFWNSRYC*ASSSSFTSSEL
Trigger: CAACTCGGAGGACGTGAAGGAGGAAGAGGAGGCCAAACAGTATCGAGAGTTCCAGAACCGACAAGTACAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CAA 90 bp AGAGTGAGGTACGGCTTGCCCTTGGCACCTATCTCCAGCAGGATCTaGTCAATATCCGGGCGCAGACACAGTTTATTCAAGAACCGCTCA +
Preference number: 6 (lower is better)
Translates to: RVRYGLPLAPISSRI*SISGRRHSLFKNRS
Trigger: TGAGCGGTTCTTGAATAAACTGTGTCTGCGCCCGGATATTGACAAGATCCTGCTGGAGATAGGTGCCAAGGGCAAGCCGTACCTCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS TCA 72 bp GGTCAGTTGCTCCATTGCCTTGGTCTCCACGAAGGATaGCATCTCGAAGCACTTGTTCCTTTTTCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GQLLHCLGLHEG*HLEALVPFSSS
Trigger: GCTGCTCGAAAAAGGAACAAGTGCTTCGAGATGTCATCCTTCGTGGAGACCAAGGCAATGGAGCAACTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS GCA 72 bp CCTTCTTGTGTTTCTCCCTTGTCTTGGCCTCTGAGATaGTGTTGTTGCGCTTCCTGTCCAGGATCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: PSCVSPLSWPLR*CCCASCPGSSG
Trigger: TCCAGAAGATCCTGGACAGGAAGCGCAACAACAGCATCTCAGAGGCCAAGACAAGGGAGAAACACAAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000237808.2
CDS CCA 72 bp GGCCATGAAGTTCAAGAATGTGGTATTTACTGGATCTaGCCCGGCCACCACTGTCATCAGTTTCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GHEVQECGIYWI*PGHHCHQFLLQ
Trigger: CTGGAGGAGAAACTGATGACAGTGGTGGCCGGGCCAGATCCAGTAAATACCACATTCTTGAACTTCATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 72 bp TACAGCACTTCGTTGAGTCTCGGGTCTCTCTGCTTCTaGTTGATAAAGTCCATGAGCTGCTCCAGAGTGAGG +
Preference number: 6 (lower is better)
Translates to: YSTSLSLGSLCF*LIKSMSCSRVR
Trigger: CCTCACTCTGGAGCAGCTCATGGACTTTATCAACCAGAAGCAGAGAGACCCGAGACTCAACGAAGTGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 72 bp TTGTGTGAGGAGTTGATAAAATATGCGCTCAGTGGCTaGGTCATGTCCATGCTCAGATCCAGGGCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: LCEELIKYALSG*VMSMLRSRASR
Trigger: TCTGGAGGCCCTGGATCTGAGCATGGACATGACCCAGCCACTGAGCGCATATTTTATCAACTCCTCACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
CDS CCA 72 bp CCCATTGTACTCAAACACGCCTGCGTTGAGCTGCATTaGCAAATCCAAGGTCTGGAAGTTGAGGGCAACAAG +
Preference number: 6 (lower is better)
Translates to: PIVLKHACVELH*QIQGLEVEGNK
Trigger: CTTGTTGCCCTCAACTTCCAGACCTTGGATTTGCCAATGCAGCTCAACGCAGGCGTGTTTGAGTACAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 72 bp GGCCATGAAGTTCAAGAATGTGGTATTTACTGGATCTaGCCCGGCCACCACTGTCATCAGTTTCTCCTCGTC +
Preference number: 6 (lower is better)
Translates to: GHEVQECGIYWI*PGHHCHQFLLV
Trigger: GACGAGGAGAAACTGATGACAGTGGTGGCCGGGCCAGATCCAGTAAATACCACATTCTTGAACTTCATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237074.2
CDS CAA 72 bp TACGGCTTGCCCTTGGCACCTATCTCCAGCAGGATCTaGTCAATATCCGGGCGCAGACACAGTTTATTCAAG +
Preference number: 6 (lower is better)
Translates to: YGLPLAPISSRI*SISGRRHSLFK
Trigger: CTTGAATAAACTGTGTCTGCGCCCGGATATTGACAAGATCCTGCTGGAGATAGGTGCCAAGGGCAAGCCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CAA 72 bp TTGAATGAGTTCCCCTGGGATGTCCGGGTACGATATTaGCGTCTTGTGTCAACTGGGAGGCCAAACATGTCC +
Preference number: 6 (lower is better)
Translates to: LNEFPWDVRVRY*RLVSTGRPNMS
Trigger: GGACATGTTTGGCCTCCCAGTTGACACAAGACGCAAATATCGTACCCGGACATCCCAGGGGAACTCATTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CCA 72 bp TTGCACGGCCATGAAGTTCAAGAATGTGGTATTTACTaGATCTGGCCCGGCCACCACTGTCATCAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: LHGHEVQECGIY*IWPGHHCHQFL
Trigger: GAGAAACTGATGACAGTGGTGGCCGGGCCAGATCCAGTAAATACCACATTCTTGAACTTCATGGCCGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CCA 72 bp ATCTTCAGAATGTTCTTGACCGGAATCCGTCCATCCTaGTTCACCTGCAGCTTCAGCTTCGTGTATGCTTTC +
Preference number: 6 (lower is better)
Translates to: IFRMFLTGIRPS*FTCSFSFVYAF
Trigger: GAAAGCATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGGACGGATTCCGGTCAAGAACATTCTGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CCA 72 bp GTTAATCAAGGCCTCCGCATAGTCCTGGTGGTCATCTaGGATGTAGTCAGAAGCTTCAGTGTAGATAAGCAG +
Preference number: 6 (lower is better)
Translates to: VNQGLRIVLVVI*DVVRSFSVDKQ
Trigger: CTGCTTATCTACACTGAAGCTTCTGACTACATCCCAGATGACCACCAGGACTATGCGGAGGCCTTGATTAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS TCA 72 bp AGCCAATATGTTCATGGCCAGTTTAAACAACTCCTCTaGCCAGACCTTGACTGTGTCATCTTGCACGGCCAT +
Preference number: 6 (lower is better)
Translates to: SQYVHGQFKQLL*PDLDCVILHGH
Trigger: ATGGCCGTGCAAGATGACACAGTCAAGGTCTGGTCAGAGGAGTTGTTTAAACTGGCCATGAACATATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CAA 72 bp TTCATGGCCAGTTTAAACAACTCCTCTGACCAGACCTaGACTGTGTCATCTTGCACGGCCATGAAGTTCAAG +
Preference number: 6 (lower is better)
Translates to: FMASLNNSSDQT*TVSSCTAMKFK
Trigger: CTTGAACTTCATGGCCGTGCAAGATGACACAGTCAAGGTCTGGTCAGAGGAGTTGTTTAAACTGGCCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS CAA 72 bp TGCTGTTTGTTGTATTCCACAAACTCCATAGGACTCTaGGTCAGTTGCTCCATTGCCTTGGTCTCCACGAAG +
Preference number: 6 (lower is better)
Translates to: CCLLYSTNSIGL*VSCSIALVSTK
Trigger: CTTCGTGGAGACCAAGGCAATGGAGCAACTGACCAAGAGTCCTATGGAGTTTGTGGAATACAACAAACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025912.10
CDS CAA 90 bp GCCAATATGTTCATGGCCAGTTTAAACAACTCCTCTGACCAGACCTaGACTGTGTCATCTTGCACGGCCATGAAGTTCAAGAATGTGGTA +
Preference number: 6 (lower is better)
Translates to: ANMFMASLNNSSDQT*TVSSCTAMKFKNVV
Trigger: TACCACATTCTTGAACTTCATGGCCGTGCAAGATGACACAGTCAAGGTCTGGTCAGAGGAGTTGTTTAAACTGGCCATGAACATATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2
CDS GCA 72 bp AACAACTCCTCTGACCAGACCTTGACTGTGTCATCTTaGACGGCCATGAAGTTCAAGAATGTGGTATTTACT +
Preference number: 6 (lower is better)
Translates to: NNSSDQTLTVSS*TAMKFKNVVFT
Trigger: AGTAAATACCACATTCTTGAACTTCATGGCCGTGCAAGATGACACAGTCAAGGTCTGGTCAGAGGAGTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025912.10
ENSMUST00000235352.2
ENSMUST00000237074.2