RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCB2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040061

Ensembl transcript IDs: ENSMUST00000102524.8, ENSMUST00000159756.2

Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGGCCCAGACGGCTCAAAGGTTTGGGGTTACCAAGAGGGTGGGTaGACTTTTGTACTGGGATCTTCTGCTCCAGCCCTGGTCAGGAGA +
Preference number: 1 (lower is better)
Translates to: RGPDGSKVWGYQEGG*TFVLGSSAPALVRR
Trigger: TCTCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTTGGTAACCCCAAACCTTTGAGCCGTCTGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR CCA 90 bp GTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTaGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCCAA +
Preference number: 1 (lower is better)
Translates to: VLLQGMHQGRRTWFC*SHAHKREGSREQSQ
Trigger: TTGGCTTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR GCA 90 bp CCAAGATGCAGCCTAGAAGCCTGTGTAAGGTACTGCTTCAAGGCATaGATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACA +
Preference number: 1 (lower is better)
Translates to: PRCSLEACVRYCFKA*IKAGGLGSAGATPT
Trigger: TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACCTTACACAGGCTTCTAGGCTGCATCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CCA 90 bp CTAAAGAGGCCCAGACGGCTCAAAGGTTTGGGGTTACCAAGAGGGTaGGTGCACTTTTGTACTGGGATCTTCTGCTCCAGCCCTGGTCAG +
Preference number: 1 (lower is better)
Translates to: LKRPRRLKGLGLPRG*VHFCTGIFCSSPGQ
Trigger: CTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTTGGTAACCCCAAACCTTTGAGCCGTCTGGGCCTCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR GCA 90 bp GGGGAGGCCAGGACCCAGTTTCCTCTCTCTTGGTCCATATTCCTTTaGCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCAGCT +
Preference number: 1 (lower is better)
Translates to: GEARTQFPLSWSIFL*LQWHYRWDRQKKPA
Trigger: AGCTGGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAGAGAGGAAACTGGGTCCTGGCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR GCA 90 bp CTCAAGGCAGGCCCAAGATGCAGCCTAGAAGCCTGTGTAAGGTACTaGTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGA +
Preference number: 1 (lower is better)
Translates to: LKAGPRCSLEACVRY*FKACIKAGGLGSAG
Trigger: TCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACCTTACACAGGCTTCTAGGCTGCATCTTGGGCCTGCCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR TCA 90 bp GGGCCCTTGGCTGCCATTCTGGAAGTAGCCATTCCCAGAGAGCTTTaGGGCAGTATCAGGCTCTGCCTTAAGGCATTAGCAAATGCTCTG +
Preference number: 1 (lower is better)
Translates to: GPLAAILEVAIPREL*GSIRLCLKALANAL
Trigger: CAGAGCATTTGCTAATGCCTTAAGGCAGAGCCTGATACTGCCTCAAAGCTCTCTGGGAATGGCTACTTCCAGAATGGCAGCCAAGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CCA 90 bp AAGAGGGTGGGTGCACTTTTGTACTGGGATCTTCTGCTCCAGCCCTaGTCAGGAGAGACAAGGAAGGAACATATCTGTGGGGGTGTAGAG +
Preference number: 1 (lower is better)
Translates to: KRVGALLYWDLLLQP*SGETRKEHICGGVE
Trigger: CTCTACACCCCCACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR GCA 90 bp TTGGGGTTACCAAGAGGGTGGGTGCACTTTTGTACTGGGATCTTCTaGTCCAGCCCTGGTCAGGAGAGACAAGGAAGGAACATATCTGTG +
Preference number: 1 (lower is better)
Translates to: LGLPRGWVHFCTGIF*SSPGQERQGRNISV
Trigger: CACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTTGGTAACCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR CCA 90 bp TCTGCTCCAGCCCTGGTCAGGAGAGACAAGGAAGGAACATATCTGTaGGGGTGTAGAGAAGCGAGAATAACATCATCTTTTAAGGATTCT +
Preference number: 1 (lower is better)
Translates to: SAPALVRRDKEGTYL*GCREARITSSFKDS
Trigger: AGAATCCTTAAAAGATGATGTTATTCTCGCTTCTCTACACCCCCACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGCTGGAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR-3UTR TCA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGACCCAGGTTCCATaGGGACCCTTGCCCTTGATA +
Preference number: 2 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGAKTQVP*GPLPLI
Trigger: TATCAAGGGCAAGGGTCCTCATGGAACCTGGGTCTT...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR CCA 90 bp CCAGCCCTGGTCAGGAGAGACAAGGAAGGAACATATCTGTGGGGGTGTAGAGAACAAGGCAGGAGGACTTaGTTCTGCTGGAGCCACGCC +
Preference number: 2 (lower is better)
Translates to: PALVRRDKEGTYLWGCREQGRRT*FCWSHA
Trigger: GGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTG...TTCTCTACACCCCCACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR CAA 90 bp CAGACGGCTCAAAGGTTTGGGGTTACCAAGAGGGTGGGTGCACTTTaGTACTGGGATCTTCTGCTCCAGCCCTGGTCAGGAGAGACAAGG +
Preference number: 2 (lower is better)
Translates to: QTAQRFGVTKRVGAL*YWDLLLQPWSGETR
Trigger: CCTTGTCTCTCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTTGGTAACCCCAAACCTTTGAGCCGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR-3UTR CCA 90 bp CATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAAGGTCCCTTTCTCCTaGGAAATGGGACCATGTTCC +
Preference number: 2 (lower is better)
Translates to: HASRQEDLVLLEPRPQEGKVPFS*EMGPCS
Trigger: GGAACATGGTCCCATTTCCCAGGAGAAAGGGACCTT...TCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR CCA 90 bp GGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAACAATGGCACTACAGGTaGGACAGACAGAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: GLGSAGATPTRGKVPGSKQWHYR*DRQKKP
Trigger: TGGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTG...TTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CAA 90 bp AGGGGAGGCCAGGACCCAGTTTCCTCTCTCTTGGTCCATATTCCTTaGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: RGGQDPVSSLLVHIP*PSMALQVGQTEEAS
Trigger: GCTGGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAGAGAGGAAACTGGGTCCTGGCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR TCA 90 bp GTGGGTGCACTTTTGTACTGGGATCTTCTGCTCCAGCCCTGGTCAGGAGAGACACAATTGAGGGGCAGCTaGGAAAGCTTTCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: VGALLYWDLLLQPWSGETQLRGS*ESFPRK
Trigger: CTTCCTGGGAAAGCTTTCTCAGCTGCCCCTCAATTG...TGTCTCTCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR-3UTR TCA 90 bp CTGTCTTTTCCTAACTGGAGAACAGAGGCCAGGCTAAGGCAGGGGATTCTGGGACAATTGAGGGGCAGCTaGGAAAGCTTTCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: LSFPNWRTEARLRQGILGQLRGS*ESFPRK
Trigger: CTTCCTGGGAAAGCTTTCTCAGCTGCCCCTCAATTG...TCCCAGAATCCCCTGCCTTAGCCTGGCCTCTGTTCTCCAGTTAGGAAAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR CCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAAAAGGTCCCTTTCTCCTaGGAAATGGGACCATGTTCC +
Preference number: 2 (lower is better)
Translates to: GESTLEASLPLPAGVAPKKVPFS*EMGPCS
Trigger: GGAACATGGTCCCATTTCCCAGGAGAAAGGGACCTT...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR CCA 90 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACAATGGCACTACAGGTaGGACAGACAGAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: GTASRHASRQEDLVLLEPQWHYR*DRQKKP
Trigger: TGGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTG...TGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR GCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAATACTGCTTCAAGGCATaGATCAAGGCAGGAGGACTT +
Preference number: 2 (lower is better)
Translates to: GESTLEASLPLPAGVAPKYCFKA*IKAGGL
Trigger: AAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR TCA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGAAAGACCCAGGTTCCATaGGGACCCTTGCCCTTGATA +
Preference number: 2 (lower is better)
Translates to: SARPRSRKEGEPVSELERKTQVP*GPLPLI
Trigger: TATCAAGGGCAAGGGTCCTCATGGAACCTGGGTCTT...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR GCA 90 bp TTTATTGGATCCAACCACAGCAGGGGCAGGTCTCTGTGTGTGTGTGTGGTCACTTACCAAGAGGGTGGGTaGACTTTTGTACTGGGATCT +
Preference number: 2 (lower is better)
Translates to: FIGSNHSRGRSLCVCVVTYQEGG*TFVLGS
Trigger: AGATCCCAGTACAAAAGTGCACCCACCCTCTTGGTA...AGTGACCACACACACACACAGAGACCTGCCCCTGCTGTGGTTGGATCCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR-3UTR GCA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGATACTGCTTCAAGGCATaGATCAAGGCAGGAGGACTT +
Preference number: 2 (lower is better)
Translates to: SARPRSRKEGEPVSELERYCFKA*IKAGGL
Trigger: AAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR TCA 90 bp GAAGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGACAATACTTGATCAATTaGGGGGCAGCTGAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: EVPDLDPEKRVNQFQSWRQYLIN*GAAEKA
Trigger: AGCTTTCTCAGCTGCCCCTCAATTGATCAAGTATTG...TCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR CAA 90 bp ACTCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTATCAAGGCAGGAGGACTaGGTTCTGCTGGAGCCACGC +
Preference number: 3 (lower is better)
Translates to: TQAPTQDWWRTCQEVPDLSRQED*VLLEPR
Trigger: GCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGA...TAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CCA 72 bp CAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTaGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: QGMHQGRRTWFC*SHAHKREGSRE
Trigger: CTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CCA 72 bp CCAACCACAGCAGGGGCAGGTCTCTGTGTGTGTGTGTaGTCACTCTCGGTGTTCCTAAAGAGGCCCAGACGG +
Preference number: 3 (lower is better)
Translates to: PTTAGAGLCVCV*SLSVFLKRPRR
Trigger: CCGTCTGGGCCTCTTTAGGAACACCGAGAGTGACCACACACACACACAGAGACCTGCCCCTGCTGTGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR GCA 72 bp CTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTaGTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: LQGMHQGRRTWF*WSHAHKREGSR
Trigger: CCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR CAA 90 bp ACTCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTACCAGTTTCCTCTCTCTaGGTCCATATTCCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: TQAPTQDWWRTCQEVPDLPVSSL*VHIPLP
Trigger: AGGCAAAGGAATATGGACCAAGAGAGAGGAAACTGG...TAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CCA 72 bp GTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTaGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGT +
Preference number: 3 (lower is better)
Translates to: VLLQGMHQGRRT*FCWSHAHKREG
Trigger: ACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR CAA 90 bp ACTCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTATTGGTCCATATTCCTTaGCCTTCAATGGCACTACAG +
Preference number: 3 (lower is better)
Translates to: TQAPTQDWWRTCQEVPDLLVHIP*PSMALQ
Trigger: CTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAA...TAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR-3UTR CAA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATTTGGTCCATATTCCTTaGCCTTCAATGGCACTACAG +
Preference number: 3 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDLVHIP*PSMALQ
Trigger: CTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAA...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR GCA 72 bp CCAAGAGGGTGGGTGCACTTTTGTACTGGGATCTTCTaGTCCAGCCCTGGTCAGGAGAGACAAGGAAGGAAC +
Preference number: 3 (lower is better)
Translates to: PRGWVHFCTGIF*SSPGQERQGRN
Trigger: GTTCCTTCCTTGTCTCTCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR CCA 72 bp CCCAGACGGCTCAAAGGTTTGGGGTTACCAAGAGGGTaGGTGCACTTTTGTACTGGGATCTTCTGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: PRRLKGLGLPRG*VHFCTGIFCSS
Trigger: GCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTTGGTAACCCCAAACCTTTGAGCCGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR GCA 72 bp AGCCTAGAAGCCTGTGTAAGGTACTGCTTCAAGGCATaGATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: SLEACVRYCFKA*IKAGGLGSAGA
Trigger: GGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACCTTACACAGGCTTCTAGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR GCA 72 bp GGCCCAAGATGCAGCCTAGAAGCCTGTGTAAGGTACTaGTTCAAGGCATGCATCAAGGCAGGAGGACTTGGT +
Preference number: 3 (lower is better)
Translates to: GPRCSLEACVRY*FKACIKAGGLG
Trigger: ACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACCTTACACAGGCTTCTAGGCTGCATCTTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CCA 72 bp GGTGCACTTTTGTACTGGGATCTTCTGCTCCAGCCCTaGTCAGGAGAGACAAGGAAGGAACATATCTGTGGG +
Preference number: 3 (lower is better)
Translates to: GALLYWDLLLQP*SGETRKEHICG
Trigger: CCCACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR TCA 72 bp ACAGAAGAAGCCAGCTTAGAAAAGACCCAGGTTCCATaGGGACCCTTGCCCTTGATAGTCTCTAATCCCTGC +
Preference number: 3 (lower is better)
Translates to: TEEASLEKTQVP*GPLPLIVSNPC
Trigger: GCAGGGATTAGAGACTATCAAGGGCAAGGGTCCTCATGGAACCTGGGTCTTTTCTAAGCTGGCTTCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR GCA 72 bp AGGACCCAGTTTCCTCTCTCTTGGTCCATATTCCTTTaGCTTCAATGGCACTACAGGTGGGACAGACAGAAG +
Preference number: 3 (lower is better)
Translates to: RTQFPLSWSIFL*LQWHYRWDRQK
Trigger: CTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAGAGAGGAAACTGGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR TCA 72 bp CCCTTGCCCTTGATAGTCTCTAATCCCTGCCTTATCTaGGTATTAAGGTCCCTTTCTCCTGGGAAATGGGAC +
Preference number: 3 (lower is better)
Translates to: PLPLIVSNPCLI*VLRSLSPGKWD
Trigger: GTCCCATTTCCCAGGAGAAAGGGACCTTAATACTCAGATAAGGCAGGGATTAGAGACTATCAAGGGCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR TCA 72 bp CCCAAACCCCCAATACTTGATCAATTGAGGGGCAGCTaGGAAAGCTTTCCCAGGAAGCCATCTATCTCCATA +
Preference number: 3 (lower is better)
Translates to: PKPPILDQLRGS*ESFPRKPSISI
Trigger: TATGGAGATAGATGGCTTCCTGGGAAAGCTTTCTCAGCTGCCCCTCAATTGATCAAGTATTGGGGGTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR GCA 72 bp ATTAGCAAATGCTCTGTACTCAAGGCAGGCCCAAGATaGAGCCTAGAAGCCTGTGTAAGGTACTGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: ISKCSVLKAGPR*SLEACVRYCFK
Trigger: CTTGAAGCAGTACCTTACACAGGCTTCTAGGCTGCATCTTGGGCCTGCCTTGAGTACAGAGCATTTGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CCA 72 bp GCCCTGGTCAGGAGAGACAAGGAAGGAACATATCTGTaGGGGTGTAGAGAAGCGAGAATAACATCATCTTTT +
Preference number: 3 (lower is better)
Translates to: ALVRRDKEGTYL*GCREARITSSF
Trigger: AAAAGATGATGTTATTCTCGCTTCTCTACACCCCCACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR-3UTR CAA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATCCAGTTTCCTCTCTCTaGGTCCATATTCCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: LRQGILGLGSLVGRRKINPVSSL*VHIPLP
Trigger: AGGCAAAGGAATATGGACCAAGAGAGAGGAAACTGG...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATGCGGGAGCCCTTGCCTaGGCGGAGCTTGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDAGALA*AELAAC
Trigger: GCAGGCTGCAAGCTCCGCCCAGGCAAGGGCTCCCGC...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp TCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGAGGTCCCAGGCGCTGTTaGCCCATTGCCTGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: SSPHPRLVAHLPGSARPRGPRRC*PIACRD
Trigger: GTCTCGGCAGGCAATGGGTCAACAGCGCCTGGGACC...TCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp TCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGAGAGCTTGCAGCCTGCTaGCTGGGTCTGGAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SSPHPRLVAHLPGSARPRELAAC*LGLELR
Trigger: GCGGAGCTCCAGACCCAGGCAGCAGGCTGCAAGCTC...TCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp ACTCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAAGCCGAGGAAAGGCCTaGGAACTGGCCGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TQAPTQDWWRTCQEVPDLSRGKA*ELAGCQ
Trigger: CTGACAGCCGGCCAGTTCTCAGGCCTTTCCTCGGCT...TAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTCCACTCACGCAGCTTGGCTTCAGAGGCCTTCCACTCCCCCTGTCTTTTCCTAGAGCTCCGCCAGCTGTaGGGCGCCACGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LHSRSLASEAFHSPCLFLELRQL*GATLQQ
Trigger: CTGCTGCAGCGTGGCGCCGCACAGCTGGCGGAGCTC...TAGGAAAAGACAGGGGGAGTGGAAGGCCTCTGAAGCCAAGCTGCGTGAGTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATCCATCACAGCTATCCTaGGGGAGGCCAGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDPSQLS*GRPAQA
Trigger: TGCCTGAGCTGGCCTCCCTCAGGATAGCTGTGATGG...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAGAGCTTGCAGCCTGCTaGCTGGGTCTGGAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HASRQEDLVLLEPRPQEGELAAC*LGLELR
Trigger: GCGGAGCTCCAGACCCAGGCAGCAGGCTGCAAGCTC...TCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCGGAGCTTGCAGCCTaGTGCCTGGGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GLGSAGATPTRGKVPGSKAELAA*CLGLEL
Trigger: GAGCTCCAGACCCAGGCAGCAGGCTGCAAGCTCCGC...TTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATTGCTCGGTCACGTGCTaGTCCTTGCGCTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDCSVTC*SLRLRT
Trigger: CGTCCTCAAGCGCAAGGAGCAGCACGTGACCGAGCA...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCAGGAGGTCCTCGGGGCTaGGCAGAGGGATGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: ASRHASRQEDLVLLEPRPGGPRG*AEGCQV
Trigger: AACCTGGCATCCCTCTGCCCAGCCCCGAGGACCTCC...TGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAGACCATCCCCTCTGGTaGCAGCTGGCCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: FKACIKAGGLGSAGATPTDHPLW*QLAPLH
Trigger: GTGCAGAGGGGCCAGCTGTCACCAGAGGGGATGGTC...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp AGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCCAGAGGCGGCTCTCCTaGGTGTCTGCCTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: REQSQVSRKGNGAPSGAPQRRLS*VSALLT
Trigger: TGTGAGCAAGGCAGACACTCAGGAGAGCCGCCTCTG...GGGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATAAGAGTCCATGCGTGTaGCCTTGGGGTACACACGGC +
Preference number: 4 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDKSPCV*PWGTHG
Trigger: GCCGTGTGTACCCCAAGGGCACACGCATGGACTCTT...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCATGTGCGGCGCCACGCTaGAGCAGTTCCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GTASRHASRQEDLVLLEPCAAPR*SSSSQR
Trigger: GCGCTGGGAGGAACTGCTGCAGCGTGGCGCCGCACA...TGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CCAGCCCTGGTCAGGAGAGACAAGGAAGGAACATATCTGTGGGGGTGTAGAGAAGAGCTCCGCCAGCTGTaGGGCGCCACGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PALVRRDKEGTYLWGCREELRQL*GATLQQ
Trigger: CTGCTGCAGCGTGGCGCCGCACAGCTGGCGGAGCTC...TTCTCTACACCCCCACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CCA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCACCAGACAGCAGCACCTaGCGGTACATCTCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGAPDSST*RYISAE
Trigger: CTCGGCTGAGATGTACCGCCAGGTGCTGCTGTCTGG...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGGAGGTCCTCGGGGCTaGGCAGAGGGATGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: FQGAKPSVQERERSSKWSGGPRG*AEGCQV
Trigger: AACCTGGCATCCCTCTGCCCAGCCCCGAGGACCTCC...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCTTCGATACCGCCTCTTaGGGTCCCCTGGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: QGAKPSVQERERSSKWSAFDTAS*GPLGGQ
Trigger: TTGGCCTCCCAGGGGACCCCAAGAGGCGGTATCGAA...GGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCATTCGATACCGCCTCTTaGGGTCCCCTGGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGAFDTAS*GPLGGQ
Trigger: TTGGCCTCCCAGGGGACCCCAAGAGGCGGTATCGAA...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp ACTCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGCCATCTTAGCCTGTTaGCGGGGTGAGTCTACATGG +
Preference number: 4 (lower is better)
Translates to: TQAPTQDWWRTCQEVPDLAILAC*RGESTW
Trigger: CCATGTAGACTCACCCCGGCAACAGGCTAAGATGGC...TAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GTGGGTGCACTTTTGTACTGGGATCTTCTGCTCCAGCCCTGGTCAGGAGAGACATGCCTGGGCGGAGCTTaGAGCCTGCTGCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VGALLYWDLLLQPWSGETCLGGA*SLLPGS
Trigger: AGACCCAGGCAGCAGGCTGCAAGCTCCGCCCAGGCA...TGTCTCTCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR GCA 90 bp GAGGCCAGGCTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGATGCCTGGGCGGAGCTTaGAGCCTGCTGCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: EARLRQGILGLGSLVGRRCLGGA*SLLPGS
Trigger: AGACCCAGGCAGCAGGCTGCAAGCTCCGCCCAGGCA...TCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAGCCTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCATCCAGGCAGGCTGTCTaGCTCTCTTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGASRQAV*LSSSFS
Trigger: GGAGAAGCTGGAAGAGAGGCAGACAGCCTGCCTGGA...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCCCAGGCCCTTCATCTTaGCCTCATACTCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: REQSQVSRKGNGAPSGAPPGPSS*PHTLPA
Trigger: CGCTGGCAGAGTATGAGGCCAAGATGAAGGGCCTGG...GGGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CAA 72 bp CAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCGTTaGTACATTAGGAAAGGCAGAGGGGAGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: QERERSSKWSAR*YIRKGRGEART
Trigger: GGTCCTGGCCTCCCCTCTGCCTTTCCTAATGTACAAACGGGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTCCACTCACGCAGCTTGGCTTCAGAGGCCTTCCACTCCCCCTGTCTTTTCCTAGACAGCTGGCCCCTCTaGACATTGATGCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LHSRSLASEAFHSPCLFLDSWPL*TLMPLG
Trigger: ACCCAGCGGCATCAATGTGCAGAGGGGCCAGCTGTC...TAGGAAAAGACAGGGGGAGTGGAAGGCCTCTGAAGCCAAGCTGCGTGAGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAGCCATCTTAGCCTGTTaGCGGGGTGAGTCTACATGG +
Preference number: 4 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGAAILAC*RGESTW
Trigger: CCATGTAGACTCACCCCGGCAACAGGCTAAGATGGC...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAATGCTCCTCGCCTTGCTaGTGCAGCTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GESTLEASLPLPAGVAPKCSSPC*CSSCSS
Trigger: GCTGGAGCAGGAGCTGCAGCAGCAAGGCGAGGAGCA...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCATTTGCTCGGTCACGTaGTGCTCCTTGCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: REQSQVSRKGNGAPSGAPICSVT*CSLRLR
Trigger: CCTCAAGCGCAAGGAGCAGCACGTGACCGAGCAAAT...GGGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGAGATCTCGTCGATTTCTaGCCGAGGACAGAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SSPHPRLVAHLPGSARPRDLVDF*PRTEAH
Trigger: ATGAGCCTCTGTCCTCGGCCAGAAATCGACGAGATC...TCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATATCTGCTTGACAGCCTaGACCACTTCCTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDICLTA*TTSWMW
Trigger: CCACATCCAGGAAGTGGTCCAGGCTGTCAAGCAGAT...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp TGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCCAAGGCCGGACACCACTGTaGGTGTTTTCAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: WFCWSHAHKREGSREQSQGRTPL*VFSAGS
Trigger: ACTTCCTGCTGAAAACACTCACAGTGGTGTCCGGCC...TTGGCTTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAGAGGACAGAGGCTCATaGGGAAGCTCTTGTACACGG +
Preference number: 4 (lower is better)
Translates to: HASRQEDLVLLEPRPQEGEDRGS*GSSCTR
Trigger: CCGTGTACAAGAGCTTCCTCATGAGCCTCTGTCCTC...TCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGACCACTGAGAAGGGGTTaGACTGCTTGTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: HASRQEDLVLLEPRPQEGPLRRG*TACPVC
Trigger: GCAGACTGGACAAGCAGTTCAACCCCTTCTCAGTGG...TCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCATCCAGCTTCTCCTGGTaGCGCTCCAGGGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GTASRHASRQEDLVLLEPSSFSW*RSRVSV
Trigger: GACAGAGACCCTGGAGCGTCACCAGGAGAAGCTGGA...TGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAACAGAGGCGGCTCTCCTaGGTGTCTGCCTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: GESTLEASLPLPAGVAPKQRRLS*VSALLT
Trigger: TGTGAGCAAGGCAGACACTCAGGAGAGCCGCCTCTG...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAGGCTGGGCAGAGGGATaGCAGGTTTCAGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: HASRQEDLVLLEPRPQEGGWAEG*QVSEGN
Trigger: ATTTCCCTCTGAAACCTGGCATCCCTCTGCCCAGCC...TCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGCTCAAAGGTTTGGGGTTACCAAGAGGGTGGGTGCACTTTTGTACTGGGATCTGCGGAGCTTGCAGCCTaGTGCCTGGGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GSKVWGYQEGGCTFVLGSAELAA*CLGLEL
Trigger: GAGCTCCAGACCCAGGCAGCAGGCTGCAAGCTCCGC...AGATCCCAGTACAAAAGTGCACCCACCCTCTTGGTAACCCCAAACCTTTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR GCA 90 bp CTGTCTTTTCCTAACTGGAGAACAGAGGCCAGGCTAAGGCAGGGGATTCTGGGATGCTCCTCGCCTTGCTaGTGCAGCTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSFPNWRTEARLRQGILGCSSPC*CSSCSS
Trigger: GCTGGAGCAGGAGCTGCAGCAGCAAGGCGAGGAGCA...TCCCAGAATCCCCTGCCTTAGCCTGGCCTCTGTTCTCCAGTTAGGAAAAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTCCACTCACGCAGCTTGGCTTCAGAGGCCTTCCACTCCCCCTGTCTTTTCCTATCCAGGCAGGCTGTCTaGCTCTCTTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHSRSLASEAFHSPCLFLSRQAV*LSSSFS
Trigger: GGAGAAGCTGGAAGAGAGGCAGACAGCCTGCCTGGA...TAGGAAAAGACAGGGGGAGTGGAAGGCCTCTGAAGCCAAGCTGCGTGAGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACACCCTCTGGTGACAGCTaGCCCCTCTGCACATTGATG +
Preference number: 4 (lower is better)
Translates to: FKACIKAGGLGSAGATPTPSGDS*PLCTLM
Trigger: CATCAATGTGCAGAGGGGCCAGCTGTCACCAGAGGG...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AGGTTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGCCATGCGTGTGCCCTTaGGGTACACACGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: RFQGAKPSVQERERSSKWPCVCP*GTHGSS
Trigger: AGATGAGCCGTGTGTACCCCAAGGGCACACGCATGG...CCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCACCATGTTCTGCTGCATaGGCAGGTCCATTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGAPCSAA*AGPLSG
Trigger: TCCAGACAATGGACCTGCCCATGCAGCAGAACATGG...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGCGGGAGCCCTTGCCTaGGCGGAGCTTGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLVHIPLPSMALQVGQTEAGALA*AELAAC
Trigger: GCAGGCTGCAAGCTCCGCCCAGGCAAGGGCTCCCGC...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACACTCTTGAGCCTCTCCTaGGCCACCTTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: FKACIKAGGLGSAGATPTLLSLS*ATLSVV
Trigger: CACCACAGACAAGGTGGCCCAGGAGAGGCTCAAGAG...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCTGCCTTGCTCACAAGTaGTTCCTGTGGACACGACTC +
Preference number: 4 (lower is better)
Translates to: REQSQVSRKGNGAPSGAPCLAHK*FLWTRL
Trigger: GAGTCGTGTCCACAGGAACCACTTGTGAGCAAGGCA...GGGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CAA 72 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTaGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GTASRHASRQED*VLLEPRPQEGR
Trigger: CCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCTGGAAAGTCCATGTTaGAGACCTCCCGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QGAKPSVQERERSSKWSALESPC*RPPGVS
Trigger: AGAAACTCCGGGAGGTCTTCAACATGGACTTTCCAG...GGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCGACCATCCCCTCTGGTaGCAGCTGGCCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSDHPLW*QLAPLH
Trigger: GTGCAGAGGGGCCAGCTGTCACCAGAGGGGATGGTC...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGTCTTAGCTTTACTCTGTGGCCAGGGACCTGTGAGGTCAGGCCCTGGGAGGGAATCAATGCGGTCCACTaGGAAGGGGTTGAACTGCTT +
Preference number: 4 (lower is better)
Translates to: GLSFTLWPGTCEVRPWEGINAVH*EGVELL
Trigger: AAGCAGTTCAACCCCTTCTCAGTGGACCGCATTGAT...TCCCTCCCAGGGCCTGACCTCACAGGTCCCTGGCCACAGAGTAAAGCTAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR TCA 90 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCAGCGTACACTGCGCTCTaGCAGGAACTGCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GTASRHASRQEDLVLLEPAYTAL*QELPRD
Trigger: ATCTCTGGGCAGTTCCTGTCAGAGCGCAGTGTACGC...TGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCGGTCCCAGGCGCTGTTaGCCCATTGCCTGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEAGPRRC*PIACRD
Trigger: GTCTCGGCAGGCAATGGGTCAACAGCGCCTGGGACC...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAATCTCTGTCATCTGCTTaGCAGCCTGGACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: GLGSAGATPTRGKVPGSKSLSSA*QPGPLP
Trigger: AGGAAGTGGTCCAGGCTGTCAAGCAGATGACAGAGA...TTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACTTCGTCAGGGGGCTTaGCCTTCCAACAGTCTAACT +
Preference number: 4 (lower is better)
Translates to: ASRHASRQEDLVLLEPRPLRQGA*PSNSLT
Trigger: AGTTAGACTGTTGGAAGGGCAAGCCCCCTGACGAAG...TGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAAAAGAGTCCATGCGTGTaGCCTTGGGGTACACACGGC +
Preference number: 4 (lower is better)
Translates to: GESTLEASLPLPAGVAPKKSPCV*PWGTHG
Trigger: GCCGTGTGTACCCCAAGGGCACACGCATGGACTCTT...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATGTTGAACTCAAACAGTaGCATGTTCTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDVELKQ*HVLLHG
Trigger: CCCATGCAGCAGAACATGGCACTGTTTGAGTTCAAC...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGACTACCACCACATCAATaGGGTCCACTGAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: HASRQEDLVLLEPRPQEGLPPHQ*GPLRRG
Trigger: ACCCCTTCTCAGTGGACCGCATTGATGTGGTGGTAG...TCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTCCACTCACGCAGCTTGGCTTCAGAGGCCTTCCACTCCCCCTGTCTTTTCCTACATAGGTGCGTACACTaGGCTCTGACAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: LHSRSLASEAFHSPCLFLHRCVH*ALTGTA
Trigger: GGCAGTTCCTGTCAGAGCGCAGTGTACGCACCTATG...TAGGAAAAGACAGGGGGAGTGGAAGGCCTCTGAAGCCAAGCTGCGTGAGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACACATAGGTGCGTACACTaGGCTCTGACAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: FKACIKAGGLGSAGATPTHRCVH*ALTGTA
Trigger: GGCAGTTCCTGTCAGAGCGCAGTGTACGCACCTATG...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp AGGTTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGCCATGTTGCTCTCACTaGGCAGGCACAGATGGTGGT +
Preference number: 4 (lower is better)
Translates to: RFQGAKPSVQERERSSKWPCCSH*AGTDGG
Trigger: ACCACCATCTGTGCCTGCGCAGTGAGAGCAACATGG...CCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAATGTGCGGCGCCACGCTaGAGCAGTTCCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LLVHIPLPSMALQVGQTECAAPR*SSSSQR
Trigger: GCGCTGGGAGGAACTGCTGCAGCGTGGCGCCGCACA...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCCTGTCATCGGGTGTTTaGCGAGAGCTAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: FQGAKPSVQERERSSKWSLSSGV*RELARP
Trigger: AGGACGTGCTAGCTCTCGCCAAACACCCGATGACAG...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCCAAAGTCCACAAACTGCATaGAGGCCTTGGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WFCWSHAHKREGSREQSQSPQTA*RPWRAA
Trigger: AGCTGCTCTCCAAGGCCTCCATGCAGTTTGTGGACT...TTGGCTTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCCAACCATGTTCTGCTGCATaGGCAGGTCCATTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: WFCWSHAHKREGSREQSQPCSAA*AGPLSG
Trigger: TCCAGACAATGGACCTGCCCATGCAGCAGAACATGG...TTGGCTTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCCAACAGCCTGTTTCTCTCTaGCCAGCTCCATCATCTTGG +
Preference number: 4 (lower is better)
Translates to: WFCWSHAHKREGSREQSQQPVSL*PAPSSW
Trigger: CCAAGATGATGGAGCTGGCCAGAGAGAAACAGGCTG...TTGGCTTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCTCTTGAGCCTCTCCTaGGCCACCTTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: YCFKACIKAGGLGSAGATLLSLS*ATLSVV
Trigger: CACCACAGACAAGGTGGCCCAGGAGAGGCTCAAGAG...CGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCAGGCCCTTCATCTTaGCCTCATACTCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: YCFKACIKAGGLGSAGATPGPSS*PHTLPA
Trigger: CGCTGGCAGAGTATGAGGCCAAGATGAAGGGCCTGG...CGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCCAATGCCTTGCTCACAAGTaGTTCCTGTGGACACGACTC +
Preference number: 4 (lower is better)
Translates to: WFCWSHAHKREGSREQSQCLAHK*FLWTRL
Trigger: GAGTCGTGTCCACAGGAACCACTTGTGAGCAAGGCA...TTGGCTTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGACTGGAAAGTCCATGTTaGAGACCTCCCGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: HASRQEDLVLLEPRPQEGLESPC*RPPGVS
Trigger: AGAAACTCCGGGAGGTCTTCAACATGGACTTTCCAG...TCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp TCTCTGTGTGTGTGTGTGGTCACTCTCGGTGTTCCTAAAGAGGCCCAGACGGCTGGCCGGACACCACTGTaGGTGTTTTCAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SLCVCVVTLGVPKEAQTAGRTPL*VFSAGS
Trigger: ACTTCCTGCTGAAAACACTCACAGTGGTGTCCGGCC...AGCCGTCTGGGCCTCTTTAGGAACACCGAGAGTGACCACACACACACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR TCA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACACAAAGTTGTAGAAGGTaGGGTCCACCATGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: FKACIKAGGLGSAGATPTQSCRR*GPPCQG
Trigger: GCCCTGACATGGTGGACCTCACCTTCTACAACTTTG...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAAGAGGACAGAGGCTCATaGGGAAGCTCTTGTACACGG +
Preference number: 4 (lower is better)
Translates to: GESTLEASLPLPAGVAPKEDRGS*GSSCTR
Trigger: CCGTGTACAAGAGCTTCCTCATGAGCCTCTGTCCTC...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAATTTCCAGGGGATCTGTaGGCAAGGTCTCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: GLGSAGATPTRGKVPGSKFPGDL*ARSLQT
Trigger: TGTTTGGAGAGACCTTGCTCACAGATCCCCTGGAAA...TTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCGGCGCCCCATTGGACTaGCTGGCAACAGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEAGAPLD*LATGVP
Trigger: TGGGACACCTGTTGCCAGTCAGTCCAATGGGGCGCC...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCCCCTTGGCTCAGATATaGCTTCACGTTAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: FQGAKPSVQERERSSKWSPLAQI*LHVRGQ
Trigger: TTGCCCCCTAACGTGAAGGCATATCTGAGCCAAGGG...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTCCACTCACGCAGCTTGGCTTCAGAGGCCTTCCACTCCCCCTGTCTTTTCCTACCTCAGCCCAGTCCTTaGCTACGTTCTCCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: LHSRSLASEAFHSPCLFLPQPSP*LRSPCK
Trigger: CTTACAAGGAGAACGTAGGCAAGGACTGGGCTGAGG...TAGGAAAAGACAGGGGGAGTGGAAGGCCTCTGAAGCCAAGCTGCGTGAGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGTGCCATGTTCTGCTaGATGGGCAGGTCCATTGTC +
Preference number: 4 (lower is better)
Translates to: FKACIKAGGLGSAGATPTSAMFC*MGRSIV
Trigger: GACAATGGACCTGCCCATGCAGCAGAACATGGCACT...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp TCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGAGGTGTCCAAGAAATTTaGTGCCTTCTTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: SSPHPRLVAHLPGSARPRGVQEI*CLLPSQ
Trigger: CTGTGATGGAAGAAGGCAGCAAATTTCTTGGACACC...TCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAGGCTACTGTAAGATCTaGCCAGGTGTCAGGTATGTA +
Preference number: 4 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGAGYCKI*PGVRYV
Trigger: TACATACCTGACACCTGGGCAGATCTTACAGTAGCC...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCCTTGTACACGGATTCTaGGAAGTCCTCTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: REQSQVSRKGNGAPSGAPLVHGF*EVLWVD
Trigger: ATCAACCCAGAGGACTTCCCAGAATCCGTGTACAAG...GGGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CCAGCCCTGGTCAGGAGAGACAAGGAAGGAACATATCTGTGGGGGTGTAGAGAACCCTCTGGTGACAGCTaGCCCCTCTGCACATTGATG +
Preference number: 4 (lower is better)
Translates to: PALVRRDKEGTYLWGCREPSGDS*PLCTLM
Trigger: CATCAATGTGCAGAGGGGCCAGCTGTCACCAGAGGG...TTCTCTACACCCCCACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CCA 90 bp AGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCTGTGTCATGTCTTGGTaGATCAGCAGTGTATCGTGG +
Preference number: 4 (lower is better)
Translates to: REQSQVSRKGNGAPSGAPCVMSW*ISSVSW
Trigger: CCACGATACACTGCTGATCCACCAAGACATGACACA...GGGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCTGTGTCATGTCTTGGTaGATCAGCAGTGTATCGTGG +
Preference number: 4 (lower is better)
Translates to: QGAKPSVQERERSSKWSACVMSW*ISSVSW
Trigger: CCACGATACACTGCTGATCCACCAAGACATGACACA...GGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GAGGCCAGGCTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGACCCCATTGGACTGACTaGCAACAGGTGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: EARLRQGILGLGSLVGRRPHWTD*QQVSQR
Trigger: TCTCTGGGACACCTGTTGCCAGTCAGTCCAATGGGG...TCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAGCCTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCCCAGCTCCATCATCTTaGCGATTTGCTCGGTCACGT +
Preference number: 4 (lower is better)
Translates to: FQGAKPSVQERERSSKWSPAPSS*RFARSR
Trigger: ACGTGACCGAGCAAATCGCCAAGATGATGGAGCTGG...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGTCTTAGCTTTACTCTGTGGCCAGGGACCTGTGAGGTCAGGCCCTGGGAGGGATTTCAAATGATAGGATaGCAGGATACGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLSFTLWPGTCEVRPWEGFQMIG*QDTGRS
Trigger: AGACCTCCCCGTATCCTGTCATCCTATCATTTGAAA...TCCCTCCCAGGGCCTGACCTCACAGGTCCCTGGCCACAGAGTAAAGCTAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR TCA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACATTGAGGGCAACCATCTaGCATCCAGCATTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: FKACIKAGGLGSAGATPTLRATI*HPAFQN
Trigger: GTTCTGGAATGCTGGATGTCAGATGGTTGCCCTCAA...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCTTGAGGGCAACCATCTaGCATCCAGCATTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: FQGAKPSVQERERSSKWSLRATI*HPAFQN
Trigger: GTTCTGGAATGCTGGATGTCAGATGGTTGCCCTCAA...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCTTTGGTGTCAGTTTCTaGGGTCTCCTTGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: QGAKPSVQERERSSKWSAFGVSF*GLLEGL
Trigger: AAGACCTTCAAGGAGACCTCAGAAACTGACACCAAA...GGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp TCTCTGTGTGTGTGTGTGGTCACTCTCGGTGTTCCTAAAGAGGCCCAGACGGCTCCTCAGCCCAGTCCTTaGCTACGTTCTCCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: SLCVCVVTLGVPKEAQTAPQPSP*LRSPCK
Trigger: CTTACAAGGAGAACGTAGGCAAGGACTGGGCTGAGG...AGCCGTCTGGGCCTCTTTAGGAACACCGAGAGTGACCACACACACACACAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR GCA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATATCATTTTTGCCTTTTaGAAGGTGACAAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDIIFAF*KVTSTE
Trigger: CTCGGTGCTTGTCACCTTGCAAAAGGCAAAAATGAT...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp AGGTTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAACAGTGCCATGTTCTaGTGCATGGGCAGGTCCATT +
Preference number: 4 (lower is better)
Translates to: RFQGAKPSVQERERSSKWNSAMF*CMGRSI
Trigger: AATGGACCTGCCCATGCAGCAGAACATGGCACTGTT...CCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GAGGCCAGGCTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGACTACCACCACATCAATaGGGTCCACTGAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: EARLRQGILGLGSLVGRRLPPHQ*GPLRRG
Trigger: ACCCCTTCTCAGTGGACCGCATTGATGTGGTGGTAG...TCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAGCCTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGGTTGTGTCATGTCTTaGTGGATCAGCAGTGTATCG +
Preference number: 4 (lower is better)
Translates to: GLGSAGATPTRGKVPGSKGCVMS*WISSVS
Trigger: CGATACACTGCTGATCCACCAAGACATGACACAACC...TTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCAAGCTGGCGGTCTGTaGCTCTGTCACTTCTTTCGT +
Preference number: 4 (lower is better)
Translates to: YCFKACIKAGGLGSAGATQAGGL*LCHFFR
Trigger: ACGAAAGAAGTGACAGAGCCACAGACCGCCAGCTTG...CGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GAGGCCAGGCTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAACCTTGGTCATGGCTTaGATCCGTTCCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: EARLRQGILGLGSLVGRRTLVMA*IRSSLL
Trigger: CAAGAGGCTGGAACGGATCCAAGCCATGACCAAGGT...TCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAGCCTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGAACCACTTCCTGGATGTaGGAGTTGTTAATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSPHPRLVAHLPGSARPRTTSWM*ELLISL
Trigger: GAGAGAAATTAACAACTCCCACATCCAGGAAGTGGT...TCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAAATCTGCTTGACAGCCTaGACCACTTCCTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GESTLEASLPLPAGVAPKICLTA*TTSWMW
Trigger: CCACATCCAGGAAGTGGTCCAGGCTGTCAAGCAGAT...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GAGGCCAGGCTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGATGCTTTTCCATTGCCTaGATCTGCTCCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EARLRQGILGLGSLVGRRCFSIA*ICSRQA
Trigger: AGCCTGCCTGGAGCAGATCCAGGCAATGGAAAAGCA...TCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAGCCTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGTGCTTTTCCATTGCCTaGATCTGCTCCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YCFKACIKAGGLGSAGATCFSIA*ICSRQA
Trigger: AGCCTGCCTGGAGCAGATCCAGGCAATGGAAAAGCA...CGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CCAGCCCTGGTCAGGAGAGACAAGGAAGGAACATATCTGTGGGGGTGTAGAGAAGCCAGCGCCTTCTCCTaGAACTGCTTTTCCATTGCC +
Preference number: 4 (lower is better)
Translates to: PALVRRDKEGTYLWGCREASAFS*NCFSIA
Trigger: GGCAATGGAAAAGCAGTTCCAGGAGAAGGCGCTGGC...TTCTCTACACCCCCACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR CAA 72 bp AGGCAGAGGGGAGGCCAGGACCCAGTTTCCTCTCTCTaGGTCCATATTCCTTTGCCTTCAATGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: RQRGGQDPVSSL*VHIPLPSMALQ
Trigger: CTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAGAGAGGAAACTGGGTCCTGGCCTCCCCTCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CAA 72 bp CAAAGGTTTGGGGTTACCAAGAGGGTGGGTGCACTTTaGTACTGGGATCTTCTGCTCCAGCCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QRFGVTKRVGAL*YWDLLLQPWSG
Trigger: TCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTTGGTAACCCCAAACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR TCA 90 bp TCTCTGTGTGTGTGTGTGGTCACTCTCGGTGTTCCTAAAGAGGCCCAGACGGCTGGGTCTCGCTGCTTCTaGTTGATGAATTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLCVCVVTLGVPKEAQTAGSRCF*LMNLVR
Trigger: CCTGACCAAATTCATCAATCAGAAGCAGCGAGACCC...AGCCGTCTGGGCCTCTTTAGGAACACCGAGAGTGACCACACACACACACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR TCA 90 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCAGGGTCTCGCTGCTTCTaGTTGATGAATTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GTASRHASRQEDLVLLEPGSRCF*LMNLVR
Trigger: CCTGACCAAATTCATCAATCAGAAGCAGCGAGACCC...TGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp AAGAGGGTGGGTGCACTTTTGTACTGGGATCTTCTGCTCCAGCCCTGGTCAGGATTTCCAGGGGATCTGTaGGCAAGGTCTCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: KRVGALLYWDLLLQPWSGFPGDL*ARSLQT
Trigger: TGTTTGGAGAGACCTTGCTCACAGATCCCCTGGAAA...TCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR TCA 90 bp TTTATTGGATCCAACCACAGCAGGGGCAGGTCTCTGTGTGTGTGTGTGGTCACTCCACTGAGAAGGGGTTaGACTGCTTGTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: FIGSNHSRGRSLCVCVVTPLRRG*TACPVC
Trigger: GCAGACTGGACAAGCAGTTCAACCCCTTCTCAGTGG...AGTGACCACACACACACACAGAGACCTGCCCCTGCTGTGGTTGGATCCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR TCA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCGCGTACACTGCGCTCTaGCAGGAACTGCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSAYTAL*QELPRD
Trigger: ATCTCTGGGCAGTTCCTGTCAGAGCGCAGTGTACGC...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GAAGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGACCATCACAGCTATCCTaGGGGAGGCCAGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: EVPDLDPEKRVNQFQSWRPSQLS*GRPAQA
Trigger: TGCCTGAGCTGGCCTCCCTCAGGATAGCTGTGATGG...TCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACCTTCAGGGTTGAGCTaGATCTTAAGCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GTASRHASRQEDLVLLEPPSGLS*ILSFTR
Trigger: CCTGGTGAAGCTTAAGATGCAGCTCAACCCTGAAGG...TGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGACAGCTGGCCCCTCTaGACATTGATGCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLVHIPLPSMALQVGQTEDSWPL*TLMPLG
Trigger: ACCCAGCGGCATCAATGTGCAGAGGGGCCAGCTGTC...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAACGCTCTGACAGGAACTaGCCAGAGATGATCGTAATG +
Preference number: 4 (lower is better)
Translates to: GESTLEASLPLPAGVAPKRSDRN*PEMIVM
Trigger: CATTACGATCATCTCTGGGCAGTTCCTGTCAGAGCG...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp TACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCGCTCTGACAGGAACTaGCCAGAGATGATCGTAATG +
Preference number: 4 (lower is better)
Translates to: YCFKACIKAGGLGSAGATRSDRN*PEMIVM
Trigger: CATTACGATCATCTCTGGGCAGTTCCTGTCAGAGCG...CGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATTTCTGGGAAGTCCTCTaGGTTGATAGCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDFWEVL*VDSIIF
Trigger: AAAAATGATGCTATCAACCCAGAGGACTTCCCAGAA...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCCTTGTACACGGATTCTaGGAAGTCCTCTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FQGAKPSVQERERSSKWSLVHGF*EVLWVD
Trigger: ATCAACCCAGAGGACTTCCCAGAATCCGTGTACAAG...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GAGGCCAGGCTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGACAGCACACTGTTCTCTaGTCCACAGAGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: EARLRQGILGLGSLVGRRQHTVL*STEKPD
Trigger: GTCTGGTTTCTCTGTGGACCAGAGAACAGTGTGCTG...TCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAGCCTGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAACCAGACAGCAGCACCTaGCGGTACATCTCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLVHIPLPSMALQVGQTEPDSST*RYISAE
Trigger: CTCGGCTGAGATGTACCGCCAGGTGCTGCTGTCTGG...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCACGGGGTGAGTCTACATaGTTTTCAAATGATAGGATG +
Preference number: 4 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGARGEST*FSNDRM
Trigger: CATCCTATCATTTGAAAACCATGTAGACTCACCCCG...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GGGATAGGGAGGGCGTCCCTATTCATTTTCCAAAGACACAGGTGCTCACAGTTACCATGCGTGTGCCCTTaGGGTACACACGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GIGRASLFIFQRHRCSQLPCVCP*GTHGSS
Trigger: AGATGAGCCGTGTGTACCCCAAGGGCACACGCATGG...TAACTGTGAGCACCTGTGTCTTTGGAAAATGAATAGGGACGCCCTCCCTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
3UTR CAA 72 bp AGAGTTGGAGAGAGCACTCTAGAAGCTAGTCTCCCTTaGCCAGCAGGTGTAGCCCCCAAACCCCCAATACTT +
Preference number: 4 (lower is better)
Translates to: RVGESTLEASLP*PAGVAPKPPIL
Trigger: AAGTATTGGGGGTTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCCAACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp AGGTTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGTTTGGTGTCAGTTTCTaGGGTCTCCTTGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RFQGAKPSVQERERSSKWFGVSF*GLLEGL
Trigger: AAGACCTTCAAGGAGACCTCAGAAACTGACACCAAA...CCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CCAGCCCTGGTCAGGAGAGACAAGGAAGGAACATATCTGTGGGGGTGTAGAGAAAACAGTGCCATGTTCTaGTGCATGGGCAGGTCCATT +
Preference number: 4 (lower is better)
Translates to: PALVRRDKEGTYLWGCRENSAMF*CMGRSI
Trigger: AATGGACCTGCCCATGCAGCAGAACATGGCACTGTT...TTCTCTACACCCCCACAGATATGTTCCTTCCTTGTCTCTCCTGACCAGGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR GCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCCCATGTTGCTCTCACTaGGCAGGCACAGATGGTGGT +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEAPCCSH*AGTDGG
Trigger: ACCACCATCTGTGCCTGCGCAGTGAGAGCAACATGG...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCATTTGCTCGGTCACGTaGTGCTCCTTGCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEAICSVT*CSLRLR
Trigger: CCTCAAGCGCAAGGAGCAGCACGTGACCGAGCAAAT...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CTCCACTCACGCAGCTTGGCTTCAGAGGCCTTCCACTCCCCCTGTCTTTTCCTACAGGAAGTGGTTGTCTaGAAAGTCCATGTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LHSRSLASEAFHSPCLFLQEVVV*KVHVED
Trigger: GTCTTCAACATGGACTTTCCAGACAACCACTTCCTG...TAGGAAAAGACAGGGGGAGTGGAAGGCCTCTGAAGCCAAGCTGCGTGAGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCTGTCATCGGGTGTTTaGCGAGAGCTAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSLSSGV*RELARP
Trigger: AGGACGTGCTAGCTCTCGCCAAACACCCGATGACAG...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AAGAGGGTGGGTGCACTTTTGTACTGGGATCTTCTGCTCCAGCCCTGGTCAGGAGGTTGTGTCATGTCTTaGTGGATCAGCAGTGTATCG +
Preference number: 4 (lower is better)
Translates to: KRVGALLYWDLLLQPWSGGCVMS*WISSVS
Trigger: CGATACACTGCTGATCCACCAAGACATGACACAACC...TCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCACCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CCA 90 bp CAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCGAAATAGTGATTCAGTaGTTGTGTCATGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QGAKPSVQERERSSKWSAEIVIQ*LCHVLV
Trigger: CACCAAGACATGACACAACCACTGAATCACTATTTC...GGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCAGCCTGGACCACTTCCTaGATGTGGGAGTTGTTAATT +
Preference number: 4 (lower is better)
Translates to: GTASRHASRQEDLVLLEPAWTTS*MWELLI
Trigger: AATTAACAACTCCCACATCCAGGAAGTGGTCCAGGC...TGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCGCCAGCGCCTTCTCCTaGAACTGCTTTTCCATTGCC +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEAASAFS*NCFSIA
Trigger: GGCAATGGAAAAGCAGTTCCAGGAGAAGGCGCTGGC...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATAGCCGAGGAAAGGCCTaGGAACTGGCCGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINSRGKA*ELAGCQ
Trigger: CTGACAGCCGGCCAGTTCTCAGGCCTTTCCTCGGCT...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCAGCCACTCTGCCCGTTaGACTCAAACAGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSSHSAR*TQTVPC
Trigger: ACATGGCACTGTTTGAGTTCAACGGGCAGAGTGGCT...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCAGCCACTCTGCCCGTTaGACTCAAACAGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEASHSAR*TQTVPC
Trigger: ACATGGCACTGTTTGAGTTCAACGGGCAGAGTGGCT...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATGGCGCCCCATTGGACTaGCTGGCAACAGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINGAPLD*LATGVP
Trigger: TGGGACACCTGTTGCCAGTCAGTCCAATGGGGCGCC...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCTCTCTGTCATCTGCTTaGCAGCCTGGACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEASLSSA*QPGPLP
Trigger: AGGAAGTGGTCCAGGCTGTCAAGCAGATGACAGAGA...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCGAGAAGGGGTTGAACTaGTTGTCCAGTCTGCGCATG +
Preference number: 4 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSEKGLN*LSSLRM
Trigger: CATGCGCAGACTGGACAAGCAGTTCAACCCCTTCTC...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTCCACTCACGCAGCTTGGCTTCAGAGGCCTTCCACTCCCCCTGTCTTTTCCTAGTCCAAGAAATTTGCTaGCTTCTTCCATCACAGCTA +
Preference number: 4 (lower is better)
Translates to: LHSRSLASEAFHSPCLFLVQEIC*LLPSQL
Trigger: TAGCTGTGATGGAAGAAGGCAGCAAATTTCTTGGAC...TAGGAAAAGACAGGGGGAGTGGAAGGCCTCTGAAGCCAAGCTGCGTGAGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAAGGTGTCCAAGAAATTTaGTGCCTTCTTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: GESTLEASLPLPAGVAPKGVQEI*CLLPSQ
Trigger: CTGTGATGGAAGAAGGCAGCAAATTTCTTGGACACC...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GTGGGTGCACTTTTGTACTGGGATCTTCTGCTCCAGCCCTGGTCAGGAGAGACACAGGAAGTGGTTGTCTaGAAAGTCCATGTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: VGALLYWDLLLQPWSGETQEVVV*KVHVED
Trigger: GTCTTCAACATGGACTTTCCAGACAACCACTTCCTG...TGTCTCTCCTGACCAGGGCTGGAGCAGAAGATCCCAGTACAAAAGTGCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CCA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACACGGGGTGAGTCTACATaGTTTTCAAATGATAGGATG +
Preference number: 4 (lower is better)
Translates to: FKACIKAGGLGSAGATPTRGEST*FSNDRM
Trigger: CATCCTATCATTTGAAAACCATGTAGACTCACCCCG...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCAGTCCACAAACTGCATaGAGGCCTTGGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSSPQTA*RPWRAA
Trigger: AGCTGCTCTCCAAGGCCTCCATGCAGTTTGTGGACT...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCCAAGCTGGCGGTCTGTaGCTCTGTCACTTCTTTCGT +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEAQAGGL*LCHFFR
Trigger: ACGAAAGAAGTGACAGAGCCACAGACCGCCAGCTTG...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCAGCCTGTTTCTCTCTaGCCAGCTCCATCATCTTGG +
Preference number: 4 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSQPVSL*PAPSSW
Trigger: CCAAGATGATGGAGCTGGCCAGAGAGAAACAGGCTG...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCACCTTGGTCATGGCTTaGATCCGTTCCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEATLVMA*IRSSLL
Trigger: CAAGAGGCTGGAACGGATCCAAGCCATGACCAAGGT...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GAAGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGATTGTCAATGAGCACTTaGACTTGCTCAGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: EVPDLDPEKRVNQFQSWRLSMST*TCSGRA
Trigger: AGCCCGGCCTGAGCAAGTTCAAGTGCTCATTGACAA...TCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GAAGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGACCCTTGGCTCAGATATaGCTTCACGTTAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: EVPDLDPEKRVNQFQSWRPLAQI*LHVRGQ
Trigger: TTGCCCCCTAACGTGAAGGCATATCTGAGCCAAGGG...TCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGACTTCGTCAGGGGGCTTaGCCTTCCAACAGTCTAACT +
Preference number: 4 (lower is better)
Translates to: SARPRSRKEGEPVSELERLRQGA*PSNSLT
Trigger: AGTTAGACTGTTGGAAGGGCAAGCCCCCTGACGAAG...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATTGCTCGGTCACGTGCTaGTCCTTGCGCTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINCSVTC*SLRLRT
Trigger: CGTCCTCAAGCGCAAGGAGCAGCACGTGACCGAGCA...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGAATGAAGCGCTCCCCTTaGCTCAGATATGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: SARPRSRKEGEPVSELERMKRSP*LRYAFT
Trigger: CGTGAAGGCATATCTGAGCCAAGGGGAGCGCTTCAT...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAATGAAGCGCTCCCCTTaGCTCAGATATGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: LLVHIPLPSMALQVGQTEMKRSP*LRYAFT
Trigger: CGTGAAGGCATATCTGAGCCAAGGGGAGCGCTTCAT...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGAGATCTCGTCGATTTCTaGCCGAGGACAGAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SARPRSRKEGEPVSELERDLVDF*PRTEAH
Trigger: ATGAGCCTCTGTCCTCGGCCAGAAATCGACGAGATC...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAGCTGGCCCAGAAAACTaGTTCTTCTTATTCTTAATG +
Preference number: 4 (lower is better)
Translates to: FKACIKAGGLGSAGATPTAGPEN*FFLFLM
Trigger: CATTAAGAATAAGAAGAACCAGTTTTCTGGGCCAGC...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGACCAGCTCCATCATCTTaGCGATTTGCTCGGTCACGT +
Preference number: 4 (lower is better)
Translates to: SARPRSRKEGEPVSELERPAPSS*RFARSR
Trigger: ACGTGACCGAGCAAATCGCCAAGATGATGGAGCTGG...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
3UTR CAA 72 bp CAGGACCCAGTTTCCTCTCTCTTGGTCCATATTCCTTaGCCTTCAATGGCACTACAGGTGGGACAGACAGAA +
Preference number: 4 (lower is better)
Translates to: QDPVSSLLVHIP*PSMALQVGQTE
Trigger: TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAGAGAGGAAACTGGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAACTTCAATTGCTTCCTTaGACAAGATATCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GESTLEASLPLPAGVAPKLQLLP*TRYLWS
Trigger: TGACCACAGATATCTTGTTCAAGGAAGCAATTGAAG...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAATCAATGCGGTCCACTaGGAAGGGGTTGAACTGCTT +
Preference number: 4 (lower is better)
Translates to: LLVHIPLPSMALQVGQTEINAVH*EGVELL
Trigger: AAGCAGTTCAACCCCTTCTCAGTGGACCGCATTGAT...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GAAGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGACCTTCAGGGTTGAGCTaGATCTTAAGCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: EVPDLDPEKRVNQFQSWRPSGLS*ILSFTR
Trigger: CCTGGTGAAGCTTAAGATGCAGCTCAACCCTGAAGG...TCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTGTCTTTTCCTAACTGGAGAACAGAGGCCAGGCTAAGGCAGGGGATTCTGGGAATCATTTTTGCCTTTTaGAAGGTGACAAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: LSFPNWRTEARLRQGILGIIFAF*KVTSTE
Trigger: CTCGGTGCTTGTCACCTTGCAAAAGGCAAAAATGAT...TCCCAGAATCCCCTGCCTTAGCCTGGCCTCTGTTCTCCAGTTAGGAAAAGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGACAGCACACTGTTCTCTaGTCCACAGAGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: SARPRSRKEGEPVSELERQHTVL*STEKPD
Trigger: GTCTGGTTTCTCTGTGGACCAGAGAACAGTGTGCTG...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp TACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGGCTGGCCCAGAAAACTaGTTCTTCTTATTCTTAATG +
Preference number: 4 (lower is better)
Translates to: YCFKACIKAGGLGSAGATAGPEN*FFLFLM
Trigger: CATTAAGAATAAGAAGAACCAGTTTTCTGGGCCAGC...CGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCTTTCAAATGATAGGATaGCAGGATACGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSFQMIG*QDTGRS
Trigger: AGACCTCCCCGTATCCTGTCATCCTATCATTTGAAA...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GGGATAGGGAGGGCGTCCCTATTCATTTTCCAAAGACACAGGTGCTCACAGTTAGCTCTTGGGTATCTTTaGAAACTTCCCAAAGCGAGT +
Preference number: 4 (lower is better)
Translates to: GIGRASLFIFQRHRCSQLALGYL*KLPKAS
Trigger: ACTCGCTTTGGGAAGTTTGCAAAGATACCCAAGAGC...TAACTGTGAGCACCTGTGTCTTTGGAAAATGAATAGGGACGCCCTCCCTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR GCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATGGCTGGGCAGAGGGATaGCAGGTTTCAGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINGWAEG*QVSEGN
Trigger: ATTTCCCTCTGAAACCTGGCATCCCTCTGCCCAGCC...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGAGTTGAACTCAAACAGTaGCATGTTCTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: SARPRSRKEGEPVSELERVELKQ*HVLLHG
Trigger: CCCATGCAGCAGAACATGGCACTGTTTGAGTTCAAC...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp GAAGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGGCTACTGTAAGATCTaGCCAGGTGTCAGGTATGTA +
Preference number: 4 (lower is better)
Translates to: EVPDLDPEKRVNQFQSWRGYCKI*PGVRYV
Trigger: TACATACCTGACACCTGGGCAGATCTTACAGTAGCC...TCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CTGTCTTTTCCTAACTGGAGAACAGAGGCCAGGCTAAGGCAGGGGATTCTGGGAGAAATAGTGATTCAGTaGTTGTGTCATGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LSFPNWRTEARLRQGILGEIVIQ*LCHVLV
Trigger: CACCAAGACATGACACAACCACTGAATCACTATTTC...TCCCAGAATCCCCTGCCTTAGCCTGGCCTCTGTTCTCCAGTTAGGAAAAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATCCCCATTGGACTGACTaGCAACAGGTGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINPHWTD*QQVSQR
Trigger: TCTCTGGGACACCTGTTGCCAGTCAGTCCAATGGGG...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGAGCCTGGACCACTTCCTaGATGTGGGAGTTGTTAATT +
Preference number: 4 (lower is better)
Translates to: SARPRSRKEGEPVSELERAWTTS*MWELLI
Trigger: AATTAACAACTCCCACATCCAGGAAGTGGTCCAGGC...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATTTGTCAATGAGCACTTaGACTTGCTCAGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINLSMST*TCSGRA
Trigger: AGCCCGGCCTGAGCAAGTTCAAGTGCTCATTGACAA...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATAGTGCCATGTTCTGCTaGATGGGCAGGTCCATTGTC +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINSAMFC*MGRSIV
Trigger: GACAATGGACCTGCCCATGCAGCAGAACATGGCACT...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATGAGAAGGGGTTGAACTaGTTGTCCAGTCTGCGCATG +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINEKGLN*LSSLRM
Trigger: CATGCGCAGACTGGACAAGCAGTTCAACCCCTTCTC...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GAAGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGTTTTCAGCAGGAAGTaGTTGTCTGGAAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: EVPDLDPEKRVNQFQSWRVFSRK*LSGKSM
Trigger: CATGGACTTTCCAGACAACCACTTCCTGCTGAAAAC...TCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCACCACTTCCTGGATGTaGGAGTTGTTAATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VHIPLPSMALQVGQTEEATTSWM*ELLISL
Trigger: GAGAGAAATTAACAACTCCCACATCCAGGAAGTGGT...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CCA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAATTCTGGGAAGTCCTCTaGGTTGATAGCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: LLVHIPLPSMALQVGQTEFWEVL*VDSIIF
Trigger: AAAAATGATGCTATCAACCCAGAGGACTTCCCAGAA...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR GCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATGTCCAAGAAATTTGCTaGCTTCTTCCATCACAGCTA +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINVQEIC*LLPSQL
Trigger: TAGCTGTGATGGAAGAAGGCAGCAAATTTCTTGGAC...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR TCA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATCTTCAATTGCTTCCTTaGACAAGATATCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LRQGILGLGSLVGRRKINLQLLP*TRYLWS
Trigger: TGACCACAGATATCTTGTTCAAGGAAGCAATTGAAG...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 90 bp CCTGCTGCCTGGGTCTGGAGCTCCGCCAGCTGTGCGGCGCCACGCTaGAGCAGTTCCTCCCAGCGCCGGGCTCCACGGCGCTCCAACTCT +
Preference number: 5 (lower is better)
Translates to: PAAWVWSSASCAAPR*SSSSQRRAPRRSNS
Trigger: AGAGTTGGAGCGCCGTGGAGCCCGGCGCTGGGAGGAACTGCTGCAGCGTGGCGCCGCACAGCTGGCGGAGCTCCAGACCCAGGCAGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 90 bp TCCAGCCTGTCCTTCAGCTCCTGCACGCGCGGGTCCGCCCGGTCGTaGGGCTCGCTAGGCGCCACGACGGTCTCCTCACAGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SSLSFSSCTRGSARS*GSLGATTVSSQGRV
Trigger: GACCCTGCCCTGTGAGGAGACCGTCGTGGCGCCTAGCGAGCCCCACGACCGGGCGGACCCGCGCGTGCAGGAGCTGAAGGACAGGCTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 90 bp CCTCTTCTTGCGGGAGCCCTTGCCTGGGCGGAGCTTGCAGCCTGCTaGCTGGGTCTGGAGCTCCGCCAGCTGTGCGGCGCCACGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PLLAGALAWAELAAC*LGLELRQLCGATLQ
Trigger: CTGCAGCGTGGCGCCGCACAGCTGGCGGAGCTCCAGACCCAGGCAGCAGGCTGCAAGCTCCGCCCAGGCAAGGGCTCCCGCAAGAAGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 90 bp GGTCTCCTCACAGGGCAGGGTCCTCTTCTTGCGGGAGCCCTTGCCTaGGCGGAGCTTGCAGCCTGCTGCCTGGGTCTGGAGCTCCGCCAG +
Preference number: 5 (lower is better)
Translates to: GLLTGQGPLLAGALA*AELAACCLGLELRQ
Trigger: CTGGCGGAGCTCCAGACCCAGGCAGCAGGCTGCAAGCTCCGCCCAGGCAAGGGCTCCCGCAAGAAGAGGACCCTGCCCTGTGAGGAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp ACTCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTATTGCCTGGGCGGAGCTaGCAGCCTGCTGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: TQAPTQDWWRTCQEVPDLLPGRS*QPAAWV
Trigger: GACCCAGGCAGCAGGCTGCAAGCTCCGCCCAGGCAA...TAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCTTCTTGCGGGAGCCCTaGCCTGGGCGGAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: REQSQVSRKGNGAPSGAPFLREP*PGRSLQ
Trigger: CTGCAAGCTCCGCCCAGGCAAGGGCTCCCGCAAGAA...GGGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGTCTTAGCTTTACTCTGTGGCCAGGGACCTGTGAGGTCAGGCCCTGGGAGGGAGTCACGTGCTGCTCCTaGCGCTTGAGGACGGAGCGG +
Preference number: 5 (lower is better)
Translates to: GLSFTLWPGTCEVRPWEGVTCCS*RLRTER
Trigger: CCGCTCCGTCCTCAAGCGCAAGGAGCAGCACGTGAC...TCCCTCCCAGGGCCTGACCTCACAGGTCCCTGGCCACAGAGTAAAGCTAAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS TCA 90 bp TTCTTTCGTAGCTTCTTCCCCCGTGGCCTTGGTCCCAGGCGCTGTTaGCCCATTGCCTGCCGAGACTGGCGCCCCATTGGACTGACTGGC +
Preference number: 5 (lower is better)
Translates to: FFRSFFPRGLGPRRC*PIACRDWRPIGLTG
Trigger: GCCAGTCAGTCCAATGGGGCGCCAGTCTCGGCAGGCAATGGGTCAACAGCGCCTGGGACCAAGGCCACGGGGGAAGAAGCTACGAAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CTCCACTCACGCAGCTTGGCTTCAGAGGCCTTCCACTCCCCCTGTCTTTTCCTAGGCAGGGTCCTCTTCTaGCGGGAGCCCTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LHSRSLASEAFHSPCLFLGRVLF*REPLPG
Trigger: CCCAGGCAAGGGCTCCCGCAAGAAGAGGACCCTGCC...TAGGAAAAGACAGGGGGAGTGGAAGGCCTCTGAAGCCAAGCTGCGTGAGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGACTCTCCTGGGCCACCTaGTCTGTGGTGACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SSPHPRLVAHLPGSARPRLSWAT*SVVTLV
Trigger: GACCAAGGTCACCACAGACAAGGTGGCCCAGGAGAG...TCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 90 bp CCATCATCTTGGCGATTTGCTCGGTCACGTGCTGCTCCTTGCGCTTaGGGACGGAGCGGTACTGCTCCTCGCCTTGCTGCTGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: PSSWRFARSRAAPCA*GRSGTAPRLAAAAP
Trigger: AGGAGCTGCAGCAGCAAGGCGAGGAGCAGTACCGCTCCGTCCTCAAGCGCAAGGAGCAGCACGTGACCGAGCAAATCGCCAAGATGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAAGGCAGGGTCCTCTTCTaGCGGGAGCCCTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GESTLEASLPLPAGVAPKGRVLF*REPLPG
Trigger: CCCAGGCAAGGGCTCCCGCAAGAAGAGGACCCTGCC...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp ACTCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGCCAGCTCCATCATCTaGGCGATTTGCTCGGTCACG +
Preference number: 5 (lower is better)
Translates to: TQAPTQDWWRTCQEVPDLASSII*AICSVT
Trigger: CGTGACCGAGCAAATCGCCAAGATGATGGAGCTGGC...TAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATGCCAGCTCCATCATCTaGGCGATTTGCTCGGTCACG +
Preference number: 5 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDASSII*AICSVT
Trigger: CGTGACCGAGCAAATCGCCAAGATGATGGAGCTGGC...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TCTCTGTGTGTGTGTGTGGTCACTCTCGGTGTTCCTAAAGAGGCCCAGACGGCTGTTCGATACCGCCTCTaGGGGTCCCCTGGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SLCVCVVTLGVPKEAQTAVRYRL*GSPGRP
Trigger: TGGCCTCCCAGGGGACCCCAAGAGGCGGTATCGAAC...AGCCGTCTGGGCCTCTTTAGGAACACCGAGAGTGACCACACACACACACAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS TCA 90 bp AGGACCTCTCAGGCTTGTCTTCTGCTTCGGTGGGGAAGCAGTCCTTaGAGTAGGCCCGCACCGACTCCTTTACTTCAGCCTCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: RTSQACLLLRWGSSP*SRPAPTPLLQPPGP
Trigger: AGGGCCTGGAGGCTGAAGTAAAGGAGTCGGTGCGGGCCTACTTCAAGGACTGCTTCCCCACCGAAGCAGAAGACAAGCCTGAGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 90 bp CACCACGCCCTTCAGTTCCCGCAACTCTTCCAAGCTGGCGGTCTGTaGCTCTGTCACTTCTTTCGTAGCTTCTTCCCCCGTGGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: HHALQFPQLFQAGGL*LCHFFRSFFPRGLG
Trigger: ACCAAGGCCACGGGGGAAGAAGCTACGAAAGAAGTGACAGAGCCACAGACCGCCAGCTTGGAAGAGTTGCGGGAACTGAAGGGCGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAGATGAAGCGCTCCCCTaGGCTCAGATATGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGADEALP*AQICLH
Trigger: GTGAAGGCATATCTGAGCCAAGGGGAGCGCTTCATC...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGTCTTAGCTTTACTCTGTGGCCAGGGACCTGTGAGGTCAGGCCCTGGGAGGGAGTTTCATCGTCCCACTaGATGAAGCGCTCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GLSFTLWPGTCEVRPWEGVSSSH*MKRSPW
Trigger: CCAAGGGGAGCGCTTCATCAAGTGGGACGATGAAAC...TCCCTCCCAGGGCCTGACCTCACAGGTCCCTGGCCACAGAGTAAAGCTAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CAA 90 bp ACTCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAAAGGGGTTGAACTGCTaGTCCAGTCTGCGCATGAAC +
Preference number: 5 (lower is better)
Translates to: TQAPTQDWWRTCQEVPDLKGLNC*SSLRMN
Trigger: GTTCATGCGCAGACTGGACAAGCAGTTCAACCCCTT...TAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATTGTCTGTGGTGACCTaGGTCATGGCTTGGATCCGT +
Preference number: 5 (lower is better)
Translates to: SSPHPRLVAHLPGSARPRLSVVT*VMAWIR
Trigger: ACGGATCCAAGCCATGACCAAGGTCACCACAGACAA...TCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATTTGTCTGTGGTGACCTaGGTCATGGCTTGGATCCGT +
Preference number: 5 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDLSVVT*VMAWIR
Trigger: ACGGATCCAAGCCATGACCAAGGTCACCACAGACAA...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCCTCTCCTGGGCCACCTaGTCTGTGGTGACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: FQGAKPSVQERERSSKWSLSWAT*SVVTLV
Trigger: GACCAAGGTCACCACAGACAAGGTGGCCCAGGAGAG...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 90 bp GCTCCACGGCGCTCCAACTCTCGAAGCTCCTTCTCATGTCTTCGCTaGAGTTTCACCACGCCCTTCAGTTCCCGCAACTCTTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: APRRSNSRSSFSCLR*SFTTPFSSRNSSKL
Trigger: CAGCTTGGAAGAGTTGCGGGAACTGAAGGGCGTGGTGAAACTGCAGCGAAGACATGAGAAGGAGCTTCGAGAGTTGGAGCGCCGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCCAAGTTTCATCGTCCCACTaGATGAAGCGCTCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: WFCWSHAHKREGSREQSQVSSSH*MKRSPW
Trigger: CCAAGGGGAGCGCTTCATCAAGTGGGACGATGAAAC...TTGGCTTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGATCTCATGAGGAAGCTCTaGTACACGGATTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: QAPTQDWWRTCQEVPDLDLMRKL*YTDSGK
Trigger: CTTCCCAGAATCCGTGTACAAGAGCTTCCTCATGAG...ATCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCTTGCCTGGGCGGAGCTaGCAGCCTGCTGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSLPGRS*QPAAWV
Trigger: GACCCAGGCAGCAGGCTGCAAGCTCCGCCCAGGCAA...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAGATGAAGCGCTCCCCTaGGCTCAGATATGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: FKACIKAGGLGSAGATPTDEALP*AQICLH
Trigger: GTGAAGGCATATCTGAGCCAAGGGGAGCGCTTCATC...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCCTCATGAGGAAGCTCTaGTACACGGATTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: QGAKPSVQERERSSKWSALMRKL*YTDSGK
Trigger: CTTCCCAGAATCCGTGTACAAGAGCTTCCTCATGAG...GGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGGATAGGGAGGGCGTCCCTATTCATTTTCCAAAGACACAGGTGCTCACAGTTAACCCCACCAGGCTTCTaGCTGGGGGATGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: GIGRASLFIFQRHRCSQLTPPGF*LGDAGP
Trigger: TGGGCCAGCATCCCCCAGCAAGAAGCCTGGTGGGGT...TAACTGTGAGCACCTGTGTCTTTGGAAAATGAATAGGGACGCCCTCCCTATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CAA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCGTTCGATACCGCCTCTaGGGGTCCCCTGGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSVRYRL*GSPGRP
Trigger: TGGCCTCCCAGGGGACCCCAAGAGGCGGTATCGAAC...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp ACTCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTACGGTGTCCAAGAAATTaGCTGCCTTCTTCCATCACA +
Preference number: 5 (lower is better)
Translates to: TQAPTQDWWRTCQEVPDLRCPRN*LPSSIT
Trigger: TGTGATGGAAGAAGGCAGCAAATTTCTTGGACACCG...TAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAATGGGCATTGAAGTACTaGATGGGGTTGGCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: GLGSAGATPTRGKVPGSKWALKY*MGLARA
Trigger: AGCCCTTGCCAACCCCATCAAGTACTTCAATGCCCA...TTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCCGTCACGTGCTGCTCCTaGCGCTTGAGGACGGAGCGG +
Preference number: 5 (lower is better)
Translates to: VHIPLPSMALQVGQTEEAVTCCS*RLRTER
Trigger: CCGCTCCGTCCTCAAGCGCAAGGAGCAGCACGTGAC...GGCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAATCCAGGCCCTTCATCTaGGCCTCATACTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: GESTLEASLPLPAGVAPKSRPFI*ASYSAS
Trigger: GCTGGCAGAGTATGAGGCCAAGATGAAGGGCCTGGA...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 90 bp AAAGGGTTCCTCTTTCCAGACAGGATTGATGGAGTTAGCAGTAGGTaGCAGCTTGGTTCGATACCGCCTCTTGGGGTCCCCTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: KGFLFPDRIDGVSSR*QLGSIPPLGVPWEA
Trigger: GGCCTCCCAGGGGACCCCAAGAGGCGGTATCGAACCAAGCTGTCACCTACTGCTAACTCCATCAATCCTGTCTGGAAAGAGGAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 90 bp TTCTCTGGTCCACAGAGAAACCAGACCATCCCCTCTGGTGACAGCTaGCCCCTCTGCACATTGATGCCGCTGGGTTCGTACTTGTCAATG +
Preference number: 5 (lower is better)
Translates to: FSGPQRNQTIPSGDS*PLCTLMPLGSYLSM
Trigger: CATTGACAAGTACGAACCCAGCGGCATCAATGTGCAGAGGGGCCAGCTGTCACCAGAGGGGATGGTCTGGTTTCTCTGTGGACCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAGGCTCTTGGGTATCTTaGCAAACTTCCCAAAGCGAG +
Preference number: 5 (lower is better)
Translates to: HASRQEDLVLLEPRPQEGGSWVS*QTSQSE
Trigger: CTCGCTTTGGGAAGTTTGCAAAGATACCCAAGAGCC...TCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CAA 90 bp GGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAATCTGGAAAGTCCATGTaGAAGACCTCCCGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: GLGSAGATPTRGKVPGSKSGKSM*KTSRSF
Trigger: GAAACTCCGGGAGGTCTTCAACATGGACTTTCCAGA...TTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TCAAGCCCCCACCCAAGACTGGTGGCGCACCTGCCAGGAAGTGCCAGACCTAGACATCATTTTTGCCTTTaGCAAGGTGACAAGCACCGA +
Preference number: 5 (lower is better)
Translates to: SSPHPRLVAHLPGSARPRHHFCL*QGDKHR
Trigger: TCGGTGCTTGTCACCTTGCAAAAGGCAAAAATGATG...TCTAGGTCTGGCACTTCCTGGCAGGTGCGCCACCAGTCTTGGGTGGGGGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAATCTTCGTCAGGGGGCTaGCCCTTCCAACAGTCTAAC +
Preference number: 5 (lower is better)
Translates to: GESTLEASLPLPAGVAPKSSSGG*PFQQSN
Trigger: GTTAGACTGTTGGAAGGGCAAGCCCCCTGACGAAGA...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCCAACCAGAATGTAAGGCATaGATGGGGATGATGCGGTGT +
Preference number: 5 (lower is better)
Translates to: WFCWSHAHKREGSREQSQPECKA*MGMMRC
Trigger: ACACCGCATCATCCCCATCAATGCCTTACATTCTGG...TTGGCTTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAATTCTTGCGGGAGCCCTaGCCTGGGCGGAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LLVHIPLPSMALQVGQTEFLREP*PGRSLQ
Trigger: CTGCAAGCTCCGCCCAGGCAAGGGCTCCCGCAAGAA...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 90 bp CGTAATGGAAAGGGTGGTGGCTACCACCACATCAATGCGGTCCACTaGGAAGGGGTTGAACTGCTTGTCCAGTCTGCGCATGAACTCGTG +
Preference number: 5 (lower is better)
Translates to: RNGKGGGYHHINAVH*EGVELLVQSAHELV
Trigger: CACGAGTTCATGCGCAGACTGGACAAGCAGTTCAACCCCTTCTCAGTGGACCGCATTGATGTGGTGGTAGCCACCACCCTTTCCATTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGATTCAGCAGGAAGTGGTaGTCTGGAAAGTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: HASRQEDLVLLEPRPQEGFSRKW*SGKSML
Trigger: CAACATGGACTTTCCAGACAACCACTTCCTGCTGAA...TCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCAATCTTCCCTTCAGGGTaGAGCTGCATCTTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: ASRHASRQEDLVLLEPRPIFPSG*SCILSF
Trigger: GAAGCTTAAGATGCAGCTCAACCCTGAAGGGAAGAT...TGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCAAAGCCAAGGGAAGTCCTCTGGGTaGATAGCATCATTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: WFCWSHAHKREGSREQSQGKSSG*IASFLP
Trigger: AGGCAAAAATGATGCTATCAACCCAGAGGACTTCCC...TTGGCTTTGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TCTCTGTGTGTGTGTGTGGTCACTCTCGGTGTTCCTAAAGAGGCCCAGACGGCTTCCACTGAGAAGGGGTaGAACTGCTTGTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: SLCVCVVTLGVPKEAQTASTEKG*NCLSSL
Trigger: CAGACTGGACAAGCAGTTCAACCCCTTCTCAGTGGA...AGCCGTCTGGGCCTCTTTAGGAACACCGAGAGTGACCACACACACACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CAA 90 bp AGGTTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGGTCTCCTTGAAGGTCTaGAGTTCAGCAGCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RFQGAKPSVQERERSSKWVSLKV*SSAACF
Trigger: GAAACAGGCTGCTGAACTCAAGACCTTCAAGGAGAC...CCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GAGGACTTGGTTCTGCTGGAGCCACGCCCACAAGAGGGAAGGTTCCAGGGAGCATCCTGGATGTGGGAGTaGTTAATTTCTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: EDLVLLEPRPQEGRFQGASWMWE*LISLLS
Trigger: GCTCAAGAGAGAAATTAACAACTCCCACATCCAGGA...TGCTCCCTGGAACCTTCCCTCTTGTGGGCGTGGCTCCAGCAGAACCAAGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 90 bp GGTGTCAGGTATGTAGTCCTTCATCTCCAGGAAGACAAAGAGAGCTaGCATGGTAAGGGCCATGTTGCTCTCACTGCGCAGGCACAGATG +
Preference number: 5 (lower is better)
Translates to: GVRYVVLHLQEDKES*HGKGHVALTAQAQM
Trigger: CATCTGTGCCTGCGCAGTGAGAGCAACATGGCCCTTACCATGCCAGCTCTCTTTGTCTTCCTGGAGATGAAGGACTACATACCTGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAATCTTCCCTTCAGGGTaGAGCTGCATCTTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: FKACIKAGGLGSAGATPTIFPSG*SCILSF
Trigger: GAAGCTTAAGATGCAGCTCAACCCTGAAGGGAAGAT...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGGGAAGTCCTCTGGGTaGATAGCATCATTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: FQGAKPSVQERERSSKWSGKSSG*IASFLP
Trigger: AGGCAAAAATGATGCTATCAACCCAGAGGACTTCCC...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCGCCGCTTCAATTGCTTCCTaGAACAAGATATCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: QGAKPSVQERERSSKWSAASIAS*NKISVV
Trigger: GACCACAGATATCTTGTTCAAGGAAGCAATTGAAGC...GGCGCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GAAGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGATCCATGCGTGTGCCCTaGGGGTACACACGGCTCATC +
Preference number: 5 (lower is better)
Translates to: EVPDLDPEKRVNQFQSWRSMRVP*GYTRLI
Trigger: GATGAGCCGTGTGTACCCCAAGGGCACACGCATGGA...TCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACCAGAATGTAAGGCATaGATGGGGATGATGCGGTGT +
Preference number: 5 (lower is better)
Translates to: GTASRHASRQEDLVLLEPPECKA*MGMMRC
Trigger: ACACCGCATCATCCCCATCAATGCCTTACATTCTGG...TGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCCTTCCTGTCACTCCTTaGAGCTTCACGGACTTCTTA +
Preference number: 5 (lower is better)
Translates to: FQGAKPSVQERERSSKWSLPVTP*SFTDFL
Trigger: TAAGAAGTCCGTGAAGCTCAAAGGAGTGACAGGAAG...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGTACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCATTGTTAATTTCTCTCTaGAGCCTCTCCTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: GTASRHASRQEDLVLLEPLLISL*SLSWAT
Trigger: GGTGGCCCAGGAGAGGCTCAAGAGAGAAATTAACAA...TGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GAGGCCAGGCTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGACGGAGTTTCTGGCTCTaGGGTATCTTTGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: EARLRQGILGLGSLVGRRRSFWL*GIFANF
Trigger: GAAGTTTGCAAAGATACCCAAGAGCCAGAAACTCCG...TCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAGCCTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CAA 90 bp TACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGTTCAGCAGGAAGTGGTaGTCTGGAAAGTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: YCFKACIKAGGLGSAGATFSRKW*SGKSML
Trigger: CAACATGGACTTTCCAGACAACCACTTCCTGCTGAA...CGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCTCTTCGTCAGGGGGCTaGCCCTTCCAACAGTCTAAC +
Preference number: 5 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSSSSGG*PFQQSN
Trigger: GTTAGACTGTTGGAAGGGCAAGCCCCCTGACGAAGA...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATACCCCACCAGGCTTCTaGCTGGGGGATGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: LRQGILGLGSLVGRRKINTPPGF*LGDAGP
Trigger: TGGGCCAGCATCCCCCAGCAAGAAGCCTGGTGGGGT...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TACTGCTTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCGGTGTCCAAGAAATTaGCTGCCTTCTTCCATCACA +
Preference number: 5 (lower is better)
Translates to: YCFKACIKAGGLGSAGATRCPRN*LPSSIT
Trigger: TGTGATGGAAGAAGGCAGCAAATTTCTTGGACACCG...CGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAAGCAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAAGTTTCTGAGGTCTCCTaGAAGGTCTTGAGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: GESTLEASLPLPAGVAPKVSEVS*KVLSSA
Trigger: TGCTGAACTCAAGACCTTCAAGGAGACCTCAGAAAC...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCGGAACTGCTTTTCCATaGCCTGGATCTGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSGTAFP*PGSAPG
Trigger: GCCTGGAGCAGATCCAGGCAATGGAAAAGCAGTTCC...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GAAGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGATCCAGGCCCTTCATCTaGGCCTCATACTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: EVPDLDPEKRVNQFQSWRSRPFI*ASYSAS
Trigger: GCTGGCAGAGTATGAGGCCAAGATGAAGGGCCTGGA...TCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 90 bp CTCATCCGACTGCATCTTCTTAATTTCTTCTTCATCCAGGTTTCCTaGCTCCTCCTCTTCCTCCTCTTCCACCACCTCCTCCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LIRLHLLNFFFIQVS*LLLFLLFHHLLLLH
Trigger: GTGGAGGAGGAGGAGGTGGTGGAAGAGGAGGAAGAGGAGGAGTCAGGAAACCTGGATGAAGAAGAAATTAAGAAGATGCAGTCGGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 90 bp GAGGCTATTGAAGTTTCATCGTCCCACTTGATGAAGCGCTCCCCTTaGCTCAGATATGCCTTCACGTTAGGGGGCAATAGAACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: EAIEVSSSHLMKRSP*LRYAFTLGGNRTGL
Trigger: CAACCCTGTTCTATTGCCCCCTAACGTGAAGGCATATCTGAGCCAAGGGGAGCGCTTCATCAAGTGGGACGATGAAACTTCAATAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 90 bp GGGCTTAGCTTTAGAGTGGTAGGAAGTGAAGATCTCGTCGATTTCTaGCCGAGGACAGAGGCTCATGAGGAAGCTCTTGTACACGGATTC +
Preference number: 5 (lower is better)
Translates to: GLSFRVVGSEDLVDF*PRTEAHEEALVHGF
Trigger: GAATCCGTGTACAAGAGCTTCCTCATGAGCCTCTGTCCTCGGCCAGAAATCGACGAGATCTTCACTTCCTACCACTCTAAAGCTAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TTCCAGGGAGCAAAGCCAAGTGTCCAGGAAAGGGAACGGAGCTCCAAGTGGAGCATAGTGATTCAGTGGTaGTGTCATGTCTTGGTGGAT +
Preference number: 5 (lower is better)
Translates to: FQGAKPSVQERERSSKWSIVIQW*CHVLVD
Trigger: ATCCACCAAGACATGACACAACCACTGAATCACTAT...GCTCCACTTGGAGCTCCGTTCCCTTTCCTGGACACTTGGCTTTGCTCCCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp TTCAAGGCATGCATCAAGGCAGGAGGACTTGGTTCTGCTGGAGCCACGCCCACAGCTTCAATTGCTTCCTaGAACAAGATATCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: FKACIKAGGLGSAGATPTASIAS*NKISVV
Trigger: GACCACAGATATCTTGTTCAAGGAAGCAATTGAAGC...TGTGGGCGTGGCTCCAGCAGAACCAAGTCCTCCTGCCTTGATGCATGCCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCAAGGGGTTGAACTGCTaGTCCAGTCTGCGCATGAAC +
Preference number: 5 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSKGLNC*SSLRMN
Trigger: GTTCATGCGCAGACTGGACAAGCAGTTCAACCCCTT...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CTGTCTTTTCCTAACTGGAGAACAGAGGCCAGGCTAAGGCAGGGGATTCTGGGACTTCCTGTCACTCCTTaGAGCTTCACGGACTTCTTA +
Preference number: 5 (lower is better)
Translates to: LSFPNWRTEARLRQGILGLPVTP*SFTDFL
Trigger: TAAGAAGTCCGTGAAGCTCAAAGGAGTGACAGGAAG...TCCCAGAATCCCCTGCCTTAGCCTGGCCTCTGTTCTCCAGTTAGGAAAAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGAGGAACTGCTTTTCCATaGCCTGGATCTGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: SARPRSRKEGEPVSELERGTAFP*PGSAPG
Trigger: GCCTGGAGCAGATCCAGGCAATGGAAAAGCAGTTCC...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 90 bp GGCAGACTTCCTGTCACTCCTTTGAGCTTCACGGACTTCTTATCCTaGGCATTGAAGTACTTGATGGGGTTGGCAAGGGCTACTGTAAGA +
Preference number: 5 (lower is better)
Translates to: GRLPVTPLSFTDFLS*ALKYLMGLARATVR
Trigger: TCTTACAGTAGCCCTTGCCAACCCCATCAAGTACTTCAATGCCCAGGATAAGAAGTCCGTGAAGCTCAAAGGAGTGACAGGAAGTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGAGAGAGCACTCTAGAAGCTAGTCTCCCTTTGCCAGCAGGTGTAGCCCCCAAAATAGTGATTCAGTGGTaGTGTCATGTCTTGGTGGAT +
Preference number: 5 (lower is better)
Translates to: GESTLEASLPLPAGVAPKIVIQW*CHVLVD
Trigger: ATCCACCAAGACATGACACAACCACTGAATCACTAT...TTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGCTTCTAGAGTGCTCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATTCCATGCGTGTGCCCTaGGGGTACACACGGCTCATC +
Preference number: 5 (lower is better)
Translates to: LRQGILGLGSLVGRRKINSMRVP*GYTRLI
Trigger: GATGAGCCGTGTGTACCCCAAGGGCACACGCATGGA...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAATGGGCATTGAAGTACTaGATGGGGTTGGCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LLVHIPLPSMALQVGQTEWALKY*MGLARA
Trigger: AGCCCTTGCCAACCCCATCAAGTACTTCAATGCCCA...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAAGAAGCTTGTTAATTTCTCTCTaGAGCCTCTCCTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: GPYSFAFNGTTGGTDRRSLLISL*SLSWAT
Trigger: GGTGGCCCAGGAGAGGCTCAAGAGAGAAATTAACAA...GCTTCTTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGATCTGGAAAGTCCATGTaGAAGACCTCCCGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SARPRSRKEGEPVSELERSGKSM*KTSRSF
Trigger: GAAACTCCGGGAGGTCTTCAACATGGACTTTCCAGA...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGAGTCTCCTTGAAGGTCTaGAGTTCAGCAGCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: SARPRSRKEGEPVSELERVSLKV*SSAACF
Trigger: GAAACAGGCTGCTGAACTCAAGACCTTCAAGGAGAC...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 90 bp ATTGACAAGGCTGGACATTTCCTCATAAGCTGTCACCTCCAGGCCTaGTGTGCCCTCATCCGACTGCATCTTCTTAATTTCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: IDKAGHFLISCHLQA*CALIRLHLLNFFFI
Trigger: GATGAAGAAGAAATTAAGAAGATGCAGTCGGATGAGGGCACAGCAGGCCTGGAGGTGACAGCTTATGAGGAAATGTCCAGCCTTGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp AGTGCCAGACCTAGATCCAGAAAAGAGGGTGAACCAGTTTCAGAGTTGGAGAGAGTTTCTGAGGTCTCCTaGAAGGTCTTGAGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: SARPRSRKEGEPVSELERVSEVS*KVLSSA
Trigger: TGCTGAACTCAAGACCTTCAAGGAGACCTCAGAAAC...TCTCTCCAACTCTGAAACTGGTTCACCCTCTTTTCTGGATCTAGGTCTGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp GAGGCCAGGCTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGATTTTTCTTCATTTCTTaGGTGTCAGTTTCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: EARLRQGILGLGSLVGRRFFFIS*VSVSEV
Trigger: GACCTCAGAAACTGACACCAAAGAAATGAAGAAAAA...TCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAGCCTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATTCCACTGAGAAGGGGTaGAACTGCTTGTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: LRQGILGLGSLVGRRKINSTEKG*NCLSSL
Trigger: CAGACTGGACAAGCAGTTCAACCCCTTCTCAGTGGA...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 90 bp TGGGTATCTTTGCAAACTTCCCAAAGCGAGTATCTCGGATACTCGTaGCATCCAGGAACTCCATCTCCTGATTTTGATATGTCCAGTATA +
Preference number: 5 (lower is better)
Translates to: WVSLQTSQSEYLGYS*HPGTPSPDFDMSSI
Trigger: TATACTGGACATATCAAAATCAGGAGATGGAGTTCCTGGATGTCACGAGTATCCGAGATACTCGCTTTGGGAAGTTTGCAAAGATACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS-3UTR CAA 90 bp CTCTTGGTCCATATTCCTTTGCCTTCAATGGCACTACAGGTGGGACAGACAGAATTTTTCTTCATTTCTTaGGTGTCAGTTTCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: LLVHIPLPSMALQVGQTEFFFIS*VSVSEV
Trigger: GACCTCAGAAACTGACACCAAAGAAATGAAGAAAAA...TTCTGTCTGTCCCACCTGTAGTGCCATTGAAGGCAAAGGAATATGGACCAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS-3UTR CAA 90 bp CTAAGGCAGGGGATTCTGGGATTGGGTTCTTTGGTAGGAAGGAGAAAAATAAATTCCTGGATGTGGGAGTaGTTAATTTCTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LRQGILGLGSLVGRRKINSWMWE*LISLLS
Trigger: GCTCAAGAGAGAAATTAACAACTCCCACATCCAGGA...ATTTATTTTTCTCCTTCCTACCAAAGAACCCAATCCCAGAATCCCCTGCCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp TGGGTCTGGAGCTCCGCCAGCTGTGCGGCGCCACGCTaGAGCAGTTCCTCCCAGCGCCGGGCTCCACGGCGC +
Preference number: 6 (lower is better)
Translates to: WVWSSASCAAPR*SSSSQRRAPRR
Trigger: GCGCCGTGGAGCCCGGCGCTGGGAGGAACTGCTGCAGCGTGGCGCCGCACAGCTGGCGGAGCTCCAGACCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp TCCTTCAGCTCCTGCACGCGCGGGTCCGCCCGGTCGTaGGGCTCGCTAGGCGCCACGACGGTCTCCTCACAG +
Preference number: 6 (lower is better)
Translates to: SFSSCTRGSARS*GSLGATTVSSQ
Trigger: CTGTGAGGAGACCGTCGTGGCGCCTAGCGAGCCCCACGACCGGGCGGACCCGCGCGTGCAGGAGCTGAAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp TCCTCTTCTTGCGGGAGCCCTTGCCTGGGCGGAGCTTaGAGCCTGCTGCCTGGGTCTGGAGCTCCGCCAGCT +
Preference number: 6 (lower is better)
Translates to: SSSCGSPCLGGA*SLLPGSGAPPA
Trigger: AGCTGGCGGAGCTCCAGACCCAGGCAGCAGGCTGCAAGCTCCGCCCAGGCAAGGGCTCCCGCAAGAAGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp GCCACGACGGTCTCCTCACAGGGCAGGGTCCTCTTCTaGCGGGAGCCCTTGCCTGGGCGGAGCTTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: ATTVSSQGRVLF*REPLPGRSLQP
Trigger: AGGCTGCAAGCTCCGCCCAGGCAAGGGCTCCCGCAAGAAGAGGACCCTGCCCTGTGAGGAGACCGTCGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp AGCTTCTTCCCCCGTGGCCTTGGTCCCAGGCGCTGTTaGCCCATTGCCTGCCGAGACTGGCGCCCCATTGGA +
Preference number: 6 (lower is better)
Translates to: SFFPRGLGPRRC*PIACRDWRPIG
Trigger: TCCAATGGGGCGCCAGTCTCGGCAGGCAATGGGTCAACAGCGCCTGGGACCAAGGCCACGGGGGAAGAAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp TGGCGATTTGCTCGGTCACGTGCTGCTCCTTGCGCTTaGGGACGGAGCGGTACTGCTCCTCGCCTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: WRFARSRAAPCA*GRSGTAPRLAA
Trigger: AGCAGCAAGGCGAGGAGCAGTACCGCTCCGTCCTCAAGCGCAAGGAGCAGCACGTGACCGAGCAAATCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp TTGGCGATTTGCTCGGTCACGTGCTGCTCCTTGCGCTaGAGGACGGAGCGGTACTGCTCCTCGCCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: LAICSVTCCSLR*RTERYCSSPCC
Trigger: GCAGCAAGGCGAGGAGCAGTACCGCTCCGTCCTCAAGCGCAAGGAGCAGCACGTGACCGAGCAAATCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 90 bp TCCATCATCTTGGCGATTTGCTCGGTCACGTGCTGCTCCTTGCGCTaGAGGACGGAGCGGTACTGCTCCTCGCCTTGCTGCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SIILAICSVTCCSLR*RTERYCSSPCCCSS
Trigger: GGAGCTGCAGCAGCAAGGCGAGGAGCAGTACCGCTCCGTCCTCAAGCGCAAGGAGCAGCACGTGACCGAGCAAATCGCCAAGATGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp GACCCATTGCCTGCCGAGACTGGCGCCCCATTGGACTaGCTGGCAACAGGTGTCCCAGAGAAGAGTTTCTCG +
Preference number: 6 (lower is better)
Translates to: DPLPAETGAPLD*LATGVPEKSFS
Trigger: CGAGAAACTCTTCTCTGGGACACCTGTTGCCAGTCAGTCCAATGGGGCGCCAGTCTCGGCAGGCAATGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp CATTGCCTGCCGAGACTGGCGCCCCATTGGACTGACTaGCAACAGGTGTCCCAGAGAAGAGTTTCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: HCLPRLAPHWTD*QQVSQRRVSRA
Trigger: TGCCCGAGAAACTCTTCTCTGGGACACCTGTTGCCAGTCAGTCCAATGGGGCGCCAGTCTCGGCAGGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp GAGGCGGCTCTCCTGAGTGTCTGCCTTGCTCACAAGTaGTTCCTGTGGACACGACTCCTCAGAGGCCTCACA +
Preference number: 6 (lower is better)
Translates to: EAALLSVCLAHK*FLWTRLLRGLT
Trigger: TGTGAGGCCTCTGAGGAGTCGTGTCCACAGGAACCACTTGTGAGCAAGGCAGACACTCAGGAGAGCCGCCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp ATCATCTTGGCGATTTGCTCGGTCACGTGCTGCTCCTaGCGCTTGAGGACGGAGCGGTACTGCTCCTCGCCT +
Preference number: 6 (lower is better)
Translates to: IILAICSVTCCS*RLRTERYCSSP
Trigger: AGGCGAGGAGCAGTACCGCTCCGTCCTCAAGCGCAAGGAGCAGCACGTGACCGAGCAAATCGCCAAGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp TTGAGCCTCTCCTGGGCCACCTTGTCTGTGGTGACCTaGGTCATGGCTTGGATCCGTTCCAGCCTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LSLSWATLSVVT*VMAWIRSSLLA
Trigger: GGCCAAGAGGCTGGAACGGATCCAAGCCATGACCAAGGTCACCACAGACAAGGTGGCCCAGGAGAGGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp GTCAATGAGCACTTGAACTTGCTCAGGCCGGGCTGGTaGGAACAGCAAGGAGTTGAGTCGAGGGTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: VNEHLNLLRPGW*EQQGVESRVSL
Trigger: CAGCGAGACCCTCGACTCAACTCCTTGCTGTTCCCACCAGCCCGGCCTGAGCAAGTTCAAGTGCTCATTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp TCAGCAGCCTGTTTCTCTCTGGCCAGCTCCATCATCTaGGCGATTTGCTCGGTCACGTGCTGCTCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: SAACFSLASSII*AICSVTCCSLR
Trigger: GCGCAAGGAGCAGCACGTGACCGAGCAAATCGCCAAGATGATGGAGCTGGCCAGAGAGAAACAGGCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp CACGACTCCTCAGAGGCCTCACAGGACCTCTCAGGCTaGTCTTCTGCTTCGGTGGGGAAGCAGTCCTTGAAG +
Preference number: 6 (lower is better)
Translates to: HDSSEASQDLSG*SSASVGKQSLK
Trigger: CTTCAAGGACTGCTTCCCCACCGAAGCAGAAGACAAGCCTGAGAGGTCCTGTGAGGCCTCTGAGGAGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp TCTCCTGGTGACGCTCCAGGGTCTCTGTCATCTGCTTaGCAGCCTGGACCACTTCCTGGATGTGGGAGTTGT +
Preference number: 6 (lower is better)
Translates to: SPGDAPGSLSSA*QPGPLPGCGSC
Trigger: ACAACTCCCACATCCAGGAAGTGGTCCAGGCTGTCAAGCAGATGACAGAGACCCTGGAGCGTCACCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp CAGGCTTGTCTTCTGCTTCGGTGGGGAAGCAGTCCTTaGAGTAGGCCCGCACCGACTCCTTTACTTCAGCCT +
Preference number: 6 (lower is better)
Translates to: QACLLLRWGSSP*SRPAPTPLLQP
Trigger: AGGCTGAAGTAAAGGAGTCGGTGCGGGCCTACTTCAAGGACTGCTTCCCCACCGAAGCAGAAGACAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp AACCAGACCATCCCCTCTGGTGACAGCTGGCCCCTCTaGACATTGATGCCGCTGGGTTCGTACTTGTCAATG +
Preference number: 6 (lower is better)
Translates to: NQTIPSGDSWPL*TLMPLGSYLSM
Trigger: CATTGACAAGTACGAACCCAGCGGCATCAATGTGCAGAGGGGCCAGCTGTCACCAGAGGGGATGGTCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp GCCTTCTCCTGGAACTGCTTTTCCATTGCCTGGATCTaGTCCAGGCAGGCTGTCTGCCTCTCTTCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: AFSWNCFSIAWI*SRQAVCLSSSF
Trigger: GAAGCTGGAAGAGAGGCAGACAGCCTGCCTGGAGCAGATCCAGGCAATGGAAAAGCAGTTCCAGGAGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp CTTGTCAATGAGCACTTGAACTTGCTCAGGCCGGGCTaGTGGGAACAGCAAGGAGTTGAGTCGAGGGTCTCG +
Preference number: 6 (lower is better)
Translates to: LVNEHLNLLRPG*WEQQGVESRVS
Trigger: CGAGACCCTCGACTCAACTCCTTGCTGTTCCCACCAGCCCGGCCTGAGCAAGTTCAAGTGCTCATTGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp ACCATCCCCTCTGGTGACAGCTGGCCCCTCTGCACATaGATGCCGCTGGGTTCGTACTTGTCAATGAGCACT +
Preference number: 6 (lower is better)
Translates to: TIPSGDSWPLCT*MPLGSYLSMST
Trigger: AGTGCTCATTGACAAGTACGAACCCAGCGGCATCAATGTGCAGAGGGGCCAGCTGTCACCAGAGGGGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp CAGACAGGATTGATGGAGTTAGCAGTAGGTGACAGCTaGGTTCGATACCGCCTCTTGGGGTCCCCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: QTGLMELAVGDS*VRYRLLGSPGR
Trigger: CCTCCCAGGGGACCCCAAGAGGCGGTATCGAACCAAGCTGTCACCTACTGCTAACTCCATCAATCCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp TTGATGCCGCTGGGTTCGTACTTGTCAATGAGCACTTaGACTTGCTCAGGCCGGGCTGGTGGGAACAGCAAG +
Preference number: 6 (lower is better)
Translates to: LMPLGSYLSMST*TCSGRAGGNSK
Trigger: CTTGCTGTTCCCACCAGCCCGGCCTGAGCAAGTTCAAGTGCTCATTGACAAGTACGAACCCAGCGGCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp AAGGGTGGTGGCTACCACCACATCAATGCGGTCCACTaGGAAGGGGTTGAACTGCTTGTCCAGTCTGCGCAT +
Preference number: 6 (lower is better)
Translates to: KGGGYHHINAVH*EGVELLVQSAH
Trigger: ATGCGCAGACTGGACAAGCAGTTCAACCCCTTCTCAGTGGACCGCATTGATGTGGTGGTAGCCACCACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp TTCAGCCTCCAGGCCCTTCATCTTGGCCTCATACTCTaGCAGCGCCTTCTCCTGGAACTGCTTTTCCATTGC +
Preference number: 6 (lower is better)
Translates to: FSLQALHLGLIL*QRLLLELLFHC
Trigger: GCAATGGAAAAGCAGTTCCAGGAGAAGGCGCTGGCAGAGTATGAGGCCAAGATGAAGGGCCTGGAGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp CTTCAGTTCCCGCAACTCTTCCAAGCTGGCGGTCTGTaGCTCTGTCACTTCTTTCGTAGCTTCTTCCCCCGT +
Preference number: 6 (lower is better)
Translates to: LQFPQLFQAGGL*LCHFFRSFFPR
Trigger: ACGGGGGAAGAAGCTACGAAAGAAGTGACAGAGCCACAGACCGCCAGCTTGGAAGAGTTGCGGGAACTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp AATGTGCTTCGAGGAGCATTGACTGTCATCGGGTGTTaGGCGAGAGCTAGCACGTCCTCAGCCCAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: NVLRGALTVIGC*ARASTSSAQSL
Trigger: CAAGGACTGGGCTGAGGACGTGCTAGCTCTCGCCAAACACCCGATGACAGTCAATGCTCCTCGAAGCACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 90 bp TCCTCTTTCCAGACAGGATTGATGGAGTTAGCAGTAGGTGACAGCTaGGTTCGATACCGCCTCTTGGGGTCCCCTGGGAGGCCAAACAGT +
Preference number: 6 (lower is better)
Translates to: SSFQTGLMELAVGDS*VRYRLLGSPGRPNS
Trigger: ACTGTTTGGCCTCCCAGGGGACCCCAAGAGGCGGTATCGAACCAAGCTGTCACCTACTGCTAACTCCATCAATCCTGTCTGGAAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp CTCTTTCCAGACAGGATTGATGGAGTTAGCAGTAGGTaGCAGCTTGGTTCGATACCGCCTCTTGGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: LFPDRIDGVSSR*QLGSIPPLGVP
Trigger: GGGGACCCCAAGAGGCGGTATCGAACCAAGCTGTCACCTACTGCTAACTCCATCAATCCTGTCTGGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp ATTGATGCCGCTGGGTTCGTACTTGTCAATGAGCACTaGAACTTGCTCAGGCCGGGCTGGTGGGAACAGCAA +
Preference number: 6 (lower is better)
Translates to: IDAAGFVLVNEH*NLLRPGWWEQQ
Trigger: TTGCTGTTCCCACCAGCCCGGCCTGAGCAAGTTCAAGTGCTCATTGACAAGTACGAACCCAGCGGCATCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp TGCTTGACAGCCTGGACCACTTCCTGGATGTGGGAGTaGTTAATTTCTCTCTTGAGCCTCTCCTGGGCCACC +
Preference number: 6 (lower is better)
Translates to: CLTAWTTSWMWE*LISLLSLSWAT
Trigger: GGTGGCCCAGGAGAGGCTCAAGAGAGAAATTAACAACTCCCACATCCAGGAAGTGGTCCAGGCTGTCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp AGATCTCGTCGATTTCTGGCCGAGGACAGAGGCTCATaGGGAAGCTCTTGTACACGGATTCTGGGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: RSRRFLAEDRGS*GSSCTRILGSP
Trigger: AGGACTTCCCAGAATCCGTGTACAAGAGCTTCCTCATGAGCCTCTGTCCTCGGCCAGAAATCGACGAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp GAAGTCCTCTGGGTTGATAGCATCATTTTTGCCTTTTaGAAGGTGACAAGCACCGAGGGCAGCTTCCACCCG +
Preference number: 6 (lower is better)
Translates to: EVLWVDSIIFAF*KVTSTEGSFHP
Trigger: CGGGTGGAAGCTGCCCTCGGTGCTTGTCACCTTGCAAAAGGCAAAAATGATGCTATCAACCCAGAGGACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp CTCTGCCCGTTGAACTCAAACAGTGCCATGTTCTGCTaGATGGGCAGGTCCATTGTCTGGAAATTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LCPLNSNSAMFC*MGRSIVWKLRA
Trigger: TGCCCTCAATTTCCAGACAATGGACCTGCCCATGCAGCAGAACATGGCACTGTTTGAGTTCAACGGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp CCACTCTGCCCGTTGAACTCAAACAGTGCCATGTTCTaGTGCATGGGCAGGTCCATTGTCTGGAAATTGAGG +
Preference number: 6 (lower is better)
Translates to: PLCPLNSNSAMF*CMGRSIVWKLR
Trigger: CCTCAATTTCCAGACAATGGACCTGCCCATGCAGCAGAACATGGCACTGTTTGAGTTCAACGGGCAGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp GGTTGTGTCATGTCTTGGTGGATCAGCAGTGTATCGTaGGCCAGCACACTGTTCTCTGGTCCACAGAGAAAC +
Preference number: 6 (lower is better)
Translates to: GCVMSWWISSVS*ASTLFSGPQRN
Trigger: GTTTCTCTGTGGACCAGAGAACAGTGTGCTGGCCCACGATACACTGCTGATCCACCAAGACATGACACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 90 bp CCAGAATGTAAGGCATTGATGGGGATGATGCGGTGTCCAAGAAATTaGCTGCCTTCTTCCATCACAGCTATCCTGAGGGAGGCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: PECKALMGMMRCPRN*LPSSITAILREASS
Trigger: TGAGCTGGCCTCCCTCAGGATAGCTGTGATGGAAGAAGGCAGCAAATTTCTTGGACACCGCATCATCCCCATCAATGCCTTACATTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 90 bp CTCTCACTGCGCAGGCACAGATGGTGGTATCCAGAATGTAAGGCATaGATGGGGATGATGCGGTGTCCAAGAAATTTGCTGCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: LSLRRHRWWYPECKA*MGMMRCPRNLLPSS
Trigger: GGAAGAAGGCAGCAAATTTCTTGGACACCGCATCATCCCCATCAATGCCTTACATTCTGGATACCACCATCTGTGCCTGCGCAGTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 90 bp TTCATCTCCAGGAAGACAAAGAGAGCTGGCATGGTAAGGGCCATGTaGCTCTCACTGCGCAGGCACAGATGGTGGTATCCAGAATGTAAG +
Preference number: 6 (lower is better)
Translates to: FISRKTKRAGMVRAM*LSLRRHRWWYPECK
Trigger: CTTACATTCTGGATACCACCATCTGTGCCTGCGCAGTGAGAGCAACATGGCCCTTACCATGCCAGCTCTCTTTGTCTTCCTGGAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp GCTGTCACCTCCAGGCCTGCTGTGCCCTCATCCGACTaGATCTTCTTAATTTCTTCTTCATCCAGGTTTCCT +
Preference number: 6 (lower is better)
Translates to: AVTSRPAVPSSD*IFLISSSSRFP
Trigger: AGGAAACCTGGATGAAGAAGAAATTAAGAAGATGCAGTCGGATGAGGGCACAGCAGGCCTGGAGGTGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp GAAGTTTCATCGTCCCACTTGATGAAGCGCTCCCCTTaGCTCAGATATGCCTTCACGTTAGGGGGCAATAGA +
Preference number: 6 (lower is better)
Translates to: EVSSSHLMKRSP*LRYAFTLGGNR
Trigger: TCTATTGCCCCCTAACGTGAAGGCATATCTGAGCCAAGGGGAGCGCTTCATCAAGTGGGACGATGAAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp CCTGTCACTCCTTTGAGCTTCACGGACTTCTTATCCTaGGCATTGAAGTACTTGATGGGGTTGGCAAGGGCT +
Preference number: 6 (lower is better)
Translates to: PVTPLSFTDFLS*ALKYLMGLARA
Trigger: AGCCCTTGCCAACCCCATCAAGTACTTCAATGCCCAGGATAAGAAGTCCGTGAAGCTCAAAGGAGTGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp GTCATCTGCTTGACAGCCTGGACCACTTCCTGGATGTaGGAGTTGTTAATTTCTCTCTTGAGCCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VICLTAWTTSWM*ELLISLLSLSW
Trigger: CCAGGAGAGGCTCAAGAGAGAAATTAACAACTCCCACATCCAGGAAGTGGTCCAGGCTGTCAAGCAGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp ATTTCTGGCCGAGGACAGAGGCTCATGAGGAAGCTCTaGTACACGGATTCTGGGAAGTCCTCTGGGTTGATA +
Preference number: 6 (lower is better)
Translates to: ISGRGQRLMRKL*YTDSGKSSGLI
Trigger: TATCAACCCAGAGGACTTCCCAGAATCCGTGTACAAGAGCTTCCTCATGAGCCTCTGTCCTCGGCCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 90 bp ATCTCGTCGATTTCTGGCCGAGGACAGAGGCTCATGAGGAAGCTCTaGTACACGGATTCTGGGAAGTCCTCTGGGTTGATAGCATCATTT +
Preference number: 6 (lower is better)
Translates to: ISSISGRGQRLMRKL*YTDSGKSSGLIASF
Trigger: AAATGATGCTATCAACCCAGAGGACTTCCCAGAATCCGTGTACAAGAGCTTCCTCATGAGCCTCTGTCCTCGGCCAGAAATCGACGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 90 bp ACTCCTTTGAGCTTCACGGACTTCTTATCCTGGGCATTGAAGTACTaGATGGGGTTGGCAAGGGCTACTGTAAGATCTGCCCAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: TPLSFTDFLSWALKY*MGLARATVRSAQVS
Trigger: TGACACCTGGGCAGATCTTACAGTAGCCCTTGCCAACCCCATCAAGTACTTCAATGCCCAGGATAAGAAGTCCGTGAAGCTCAAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 90 bp CTTCCTGTCACTCCTTTGAGCTTCACGGACTTCTTATCCTGGGCATaGAAGTACTTGATGGGGTTGGCAAGGGCTACTGTAAGATCTGCC +
Preference number: 6 (lower is better)
Translates to: LPVTPLSFTDFLSWA*KYLMGLARATVRSA
Trigger: GGCAGATCTTACAGTAGCCCTTGCCAACCCCATCAAGTACTTCAATGCCCAGGATAAGAAGTCCGTGAAGCTCAAAGGAGTGACAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS GCA 72 bp GAAGACCTCCCGGAGTTTCTGGCTCTTGGGTATCTTTaGAAACTTCCCAAAGCGAGTATCTCGGATACTCGT +
Preference number: 6 (lower is better)
Translates to: EDLPEFLALGYL*KLPKASISDTR
Trigger: ACGAGTATCCGAGATACTCGCTTTGGGAAGTTTGCAAAGATACCCAAGAGCCAGAAACTCCGGGAGGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS CAA 72 bp AAGGCATTGATGGGGATGATGCGGTGTCCAAGAAATTaGCTGCCTTCTTCCATCACAGCTATCCTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: KALMGMMRCPRN*LPSSITAILRE
Trigger: CTCCCTCAGGATAGCTGTGATGGAAGAAGGCAGCAAATTTCTTGGACACCGCATCATCCCCATCAATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp CGCAGGCACAGATGGTGGTATCCAGAATGTAAGGCATaGATGGGGATGATGCGGTGTCCAAGAAATTTGCTG +
Preference number: 6 (lower is better)
Translates to: RRHRWWYPECKA*MGMMRCPRNLL
Trigger: CAGCAAATTTCTTGGACACCGCATCATCCCCATCAATGCCTTACATTCTGGATACCACCATCTGTGCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp AGCTTCACGGACTTCTTATCCTGGGCATTGAAGTACTaGATGGGGTTGGCAAGGGCTACTGTAAGATCTGCC +
Preference number: 6 (lower is better)
Translates to: SFTDFLSWALKY*MGLARATVRSA
Trigger: GGCAGATCTTACAGTAGCCCTTGCCAACCCCATCAAGTACTTCAATGCCCAGGATAAGAAGTCCGTGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp GAGAAGAGTTTCTCGGGCAGACTTCCTGTCACTCCTTaGAGCTTCACGGACTTCTTATCCTGGGCATTGAAG +
Preference number: 6 (lower is better)
Translates to: EKSFSGRLPVTP*SFTDFLSWALK
Trigger: CTTCAATGCCCAGGATAAGAAGTCCGTGAAGCTCAAAGGAGTGACAGGAAGTCTGCCCGAGAAACTCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp TTTTCAGCAGGAAGTGGTTGTCTGGAAAGTCCATGTTaGAGACCTCCCGGAGTTTCTGGCTCTTGGGTATCT +
Preference number: 6 (lower is better)
Translates to: FSAGSGCLESPC*RPPGVSGSWVS
Trigger: AGATACCCAAGAGCCAGAAACTCCGGGAGGTCTTCAACATGGACTTTCCAGACAACCACTTCCTGCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS TCA 72 bp AACAGCAAGGAGTTGAGTCGAGGGTCTCGCTGCTTCTaGTTGATGAATTTGGTCAGGTGTTCCTTGGTCATG +
Preference number: 6 (lower is better)
Translates to: NSKELSRGSRCF*LMNLVRCSLVM
Trigger: CATGACCAAGGAACACCTGACCAAATTCATCAATCAGAAGCAGCGAGACCCTCGACTCAACTCCTTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp ACAGAGGCTCATGAGGAAGCTCTTGTACACGGATTCTaGGAAGTCCTCTGGGTTGATAGCATCATTTTTGCC +
Preference number: 6 (lower is better)
Translates to: TEAHEEALVHGF*EVLWVDSIIFA
Trigger: GGCAAAAATGATGCTATCAACCCAGAGGACTTCCCAGAATCCGTGTACAAGAGCTTCCTCATGAGCCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CCA 72 bp TTTAGAGTGGTAGGAAGTGAAGATCTCGTCGATTTCTaGCCGAGGACAGAGGCTCATGAGGAAGCTCTTGTA +
Preference number: 6 (lower is better)
Translates to: FRVVGSEDLVDF*PRTEAHEEALV
Trigger: TACAAGAGCTTCCTCATGAGCCTCTGTCCTCGGCCAGAAATCGACGAGATCTTCACTTCCTACCACTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp ATAACAGGAGAGGCTATTGAAGTTTCATCGTCCCACTaGATGAAGCGCTCCCCTTGGCTCAGATATGCCTTC +
Preference number: 6 (lower is better)
Translates to: ITGEAIEVSSSH*MKRSPWLRYAF
Trigger: GAAGGCATATCTGAGCCAAGGGGAGCGCTTCATCAAGTGGGACGATGAAACTTCAATAGCCTCTCCTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 72 bp ACTCCTTTGAGCTTCACGGACTTCTTATCCTGGGCATaGAAGTACTTGATGGGGTTGGCAAGGGCTACTGTA +
Preference number: 6 (lower is better)
Translates to: TPLSFTDFLSWA*KYLMGLARATV
Trigger: TACAGTAGCCCTTGCCAACCCCATCAAGTACTTCAATGCCCAGGATAAGAAGTCCGTGAAGCTCAAAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS CAA 90 bp ACTGTGAGTGTTTTCAGCAGGAAGTGGTTGTCTGGAAAGTCCATGTaGAAGACCTCCCGGAGTTTCTGGCTCTTGGGTATCTTTGCAAAC +
Preference number: 6 (lower is better)
Translates to: TVSVFSRKWLSGKSM*KTSRSFWLLGIFAN
Trigger: GTTTGCAAAGATACCCAAGAGCCAGAAACTCCGGGAGGTCTTCAACATGGACTTTCCAGACAACCACTTCCTGCTGAAAACACTCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102524.8
CDS CAA 72 bp GTTGATGAAATAGTGATTCAGTGGTTGTGTCATGTCTaGGTGGATCAGCAGTGTATCGTGGGCCAGCACACT +
Preference number: 6 (lower is better)
Translates to: VDEIVIQWLCHV*VDQQCIVGQHT
Trigger: AGTGTGCTGGCCCACGATACACTGCTGATCCACCAAGACATGACACAACCACTGAATCACTATTTCATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2
CDS TCA 72 bp TTTTCAGCAGGAAGTGGTTGTCTGGAAAGTCCATGTTaGAGACCTCCCGGAGTTTCTGGCTCTGATTTTGAT +
Preference number: 6 (lower is better)
Translates to: FSAGSGCLESPC*RPPGVSGSDFD
Trigger: ATCAAAATCAGAGCCAGAAACTCCGGGAGGTCTTCAACATGGACTTTCCAGACAACCACTTCCTGCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159756.2
CDS GCA 72 bp AAATTCTTCACGGGAATCTTCCCTTCAGGGTTGAGCTaGATCTTAAGCTTCACCAGGATCTTGTCCAGGAAT +
Preference number: 6 (lower is better)
Translates to: KFFTGIFPSGLS*ILSFTRILSRN
Trigger: ATTCCTGGACAAGATCCTGGTGAAGCTTAAGATGCAGCTCAACCCTGAAGGGAAGATTCCCGTGAAGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102524.8
ENSMUST00000159756.2