Pregenerated sensors for PLBD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030214Ensembl transcript IDs: ENSMUST00000032336.7
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTCAGCAGCAGCGGCGATaGCGGCCTGAGGCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RVPLVSYSQLSVISMSHFQQQRR*RPEAPA Trigger: GGCAGGAGCCTCAGGCCGCCATCGCCGCTGCTGCTG...AAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | GATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCAGCCGTACCCAGCTCTaGTCTCCAGGATGCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: DGKIQLRVPLVSYSQLSVSRTQL*SPGCPS Trigger: GCTGGGGCATCCTGGAGATCAGAGCTGGGTACGGCT...GACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR GCA 90 bp | AGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGCCGCCCAGGGAGGCTaGAGCAGCAATGGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SAFGVLFAAFCHLYVSLFAAQGG*SSNGSS Trigger: GCTGCTGCCATTGCTGCTGCAGCCTCCCTGGGCGGC...AAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | CTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTCATTGGACAGGACCTaGGAGCCGTACCCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LRVPLVSYSQLSVISMSHSLDRT*EPYPAL Trigger: CAGAGCTGGGTACGGCTCTCAGGTCCTGTCCAATGA...GTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | AAGAGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCCTCGGCCATCATGTTaGCCACACGGACTCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: KSTDGKIQLRVPLVSYSQPRPSC*PHGLFA Trigger: GGCAAAGAGTCCGTGTGGCCAACATGATGGCCGAGG...CTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | GTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGCTCCAGGGCTTGGACTaGCTCCATTCAGGTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: VPLVSYSQLSVISMSHFLLQGLD*LHSGPH Trigger: GTGAGGACCTGAATGGAGCCAGTCCAAGCCCTGGAG...CAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | AAGAGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGGCATCCTCCAGGGCTTaGACTGGCTCCATTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: KSTDGKIQLRVPLVSYSQASSRA*TGSIQV Trigger: GACCTGAATGGAGCCAGTCCAAGCCCTGGAGGATGC...CTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | AGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTACATGTGTAGAGCAGTaGGGTAGCCCTCGAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: STDGKIQLRVPLVSYSQLTCVEQ*GSPRGS Trigger: GCTACCTCGAGGGCTACCTCACTGCTCTACACATGT...AAGCTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | TGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGTAGGCCAGGAGAGTCTTaGGCACCACCTGCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CLWCPIRSFLSSLCLTFCRPGES*APPASA Trigger: TGCTGAAGCAGGTGGTGCCCAAGACTCTCCTGGCCT...ACAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | TGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGTTCCCTTGGTCACGCCTaGAGATTTTGGCACGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CLWCPIRSFLSSLCLTFCSLGHA*RFWHVE Trigger: CTCCACGTGCCAAAATCTTCAGGCGTGACCAAGGGA...ACAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | AGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTTCTGAAGCCCTTTTCTaGGCTCCAAGATACAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SAFGVLFAAFCHLYVSLFSEALF*APRYSP Trigger: CGGGCTGTATCTTGGAGCTCAGAAAAGGGCTTCAGA...AAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | TGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGTTATGCTGTTGCACAGTaGACTCCTGTTGGGTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: CLWCPIRSFLSSLCLTFCYAVAQ*TPVGSL Trigger: GAGCGACCCAACAGGAGTCCACTGTGCAACAGCATA...ACAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR GCA 90 bp | GATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCACTTCATCATGCTGCTaGTTTTTGTGGGAGATAGGG | + |
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Preference number: 4 (lower is better) Translates to: DGKIQLRVPLVSYSQLSVTSSCC*FLWEIG Trigger: CCCTATCTCCCACAAAAAGCAGCAGCATGATGAAGT...GACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR GCA 90 bp | AAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTACACTGTTTGTGGTCTaGAGCAATATCAGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: KSAFGVLFAAFCHLYVSLTLFVV*SNIRPL Trigger: CAGTGGCCTGATATTGCTGCAGACCACAAACAGTGT...AAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | AGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTCAATGGAAGGATTCTTaGACAGCTGTGGGTACAGGT | + |
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Preference number: 4 (lower is better) Translates to: SAFGVLFAAFCHLYVSLFQWKDS*TAVGTG Trigger: ACCTGTACCCACAGCTGTTCAAGAATCCTTCCATTG...AAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | AAGAGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGACCAGAGTTGTGCTTTaGAAATATCTGTGCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: KSTDGKIQLRVPLVSYSQTRVVL*KYLCPL Trigger: GAGTGGGCACAGATATTTTCAAAGCACAACTCTGGT...CTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR GCA 90 bp | CTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTGCGCTTTGATGTTTTaGCTAGTCCACATTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LRVPLVSYSQLSVISMSHCALMF*LVHISC Trigger: GCAAGAAATGTGGACTAGGCAAAACATCAAAGCGCA...GTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR GCA 90 bp | GTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGTGCAAGAAAGATGTCTaGCACCTTGGTGTCATAGCA | + |
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Preference number: 4 (lower is better) Translates to: VPLVSYSQLSVISMSHFLCKKDV*HLGVIA Trigger: TGCTATGACACCAAGGTGGCAGACATCTTTCTTGCA...CAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | GTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGAGACTCCAAGAACCCTaGATAACTGCTGAAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: VPLVSYSQLSVISMSHFLRLQEP*ITAERQ Trigger: CTGTCTTTCAGCAGTTATCCAGGGTTCTTGGAGTCT...CAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | GTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGTGTACACACTGTTTGTaGTCTGCAGCAATATCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VPLVSYSQLSVISMSHFLCTHCL*SAAISG Trigger: GCCTGATATTGCTGCAGACCACAAACAGTGTGTACA...CAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR GCA 90 bp | AAGAGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTAGTCCACATTTCTTaGTTCTCCATGAAGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KSTDGKIQLRVPLVSYSQLVHIS*FSMKSC Trigger: GCAAGACTTCATGGAGAAGCAAGAAATGTGGACTAG...CTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR GCA 90 bp | AGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTAATGGGTCATCCTTCTaGGCTTTGATGTTTTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: RVPLVSYSQLSVISMSHFNGSSF*ALMFCL Trigger: TAGGCAAAACATCAAAGCGCAGAAGGATGACCCATT...AAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR GCA 90 bp | AAGAGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGGGCTTTATACTGAGATaGAAGAAAGATGTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KSTDGKIQLRVPLVSYSQGFILR*KKDVCH Trigger: GTGGCAGACATCTTTCTTGCATCTCAGTATAAAGCC...CTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | AGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTATTCTTGAACAGCTGTaGGTACAGGTTCGTGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: SAFGVLFAAFCHLYVSLFILEQL*VQVREV Trigger: CACTTCACGAACCTGTACCCACAGCTGTTCAAGAAT...AAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| 3UTR CAA 72 bp | AAGAGTACAGATGGGAAAATACAGCTAAGAGTGCCTTaGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATG | + |
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Preference number: 4 (lower is better) Translates to: KSTDGKIQLRVP*VSYSQLSVISM Trigger: CATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | AAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTAATGTTTATAGATCCTaGGCATGGCTGCATATGTGT | + |
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Preference number: 4 (lower is better) Translates to: KSAFGVLFAAFCHLYVSLNVYRS*AWLHMC Trigger: ACACATATGCAGCCATGCTCAGGATCTATAAACATT...AAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | AAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTATATCAGGCCACTGCTaGGAATATAAAAGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: KSAFGVLFAAFCHLYVSLISGHC*EYKSHP Trigger: TGGATGACTTTTATATTCTCAGCAGTGGCCTGATAT...AAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | GTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGATAAGAGCAGAACAGTaGCCCATTTCCCAAATCTTA | + |
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Preference number: 4 (lower is better) Translates to: VPLVSYSQLSVISMSHFLIRAEQ*PISQIL Trigger: TAAGATTTGGGAAATGGGCCACTGTTCTGCTCTTAT...CAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR TCA 90 bp | AAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTAATTGTTGTATCGCATaGTATATTTCATGGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KSAFGVLFAAFCHLYVSLNCCIA*YISWRP Trigger: TGGCCTCCATGAAATATATCATGCGATACAACAATT...AAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CCA 90 bp | AAGAGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGTTTGGAACATTGTCATaGGCTTTATTTTCTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KSTDGKIQLRVPLVSYSQFGTLS*ALFSLL Trigger: CAGAAGAGAAAATAAAGCCCATGACAATGTTCCAAA...CTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 90 bp | GCTCTGGCTGGCAGCGCCAGCCGCCCAGGGAGGCTGCAGCAGCAATaGCAGCAGCAGCAGCAGCGGCGATGGCGGCCTGAGGCTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: ALAGSASRPGRLQQQ*QQQQQRRWRPEAPA Trigger: GGCAGGAGCCTCAGGCCGCCATCGCCGCTGCTGCTGCTGCTGCCATTGCTGCTGCAGCCTCCCTGGGCGGCTGGCGCTGCCAGCCAGAGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 90 bp | GGGGACCAGTATGCTGTTGCACAGTGGACTCCTGTTGGGTCGCTCTaGCTGGCAGCGCCAGCCGCCCAGGGAGGCTGCAGCAGCAATGGC | + |
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Preference number: 5 (lower is better) Translates to: GDQYAVAQWTPVGSL*LAAPAAQGGCSSNG Trigger: GCCATTGCTGCTGCAGCCTCCCTGGGCGGCTGGCGCTGCCAGCCAGAGCGACCCAACAGGAGTCCACTGTGCAACAGCATACTGGTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS GCA 90 bp | CACTCCTTACCACCCTCGGCCATCATGTTGGCCACACGGACTCTTTaGCAGGCCAGGAGAGTCTTGGGCACCACCTGCTTCAGCAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: HSLPPSAIMLATRTL*QARRVLGTTCFSRV Trigger: AACCCTGCTGAAGCAGGTGGTGCCCAAGACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGCCAACATGATGGCCGAGGGTGGTAAGGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 90 bp | ATTTCCACTTTCTTCGATTCAGGGGACCAGTATGCTGTTGCACAGTaGACTCCTGTTGGGTCGCTCTGGCTGGCAGCGCCAGCCGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ISTFFDSGDQYAVAQ*TPVGSLWLAAPAAQ Trigger: CTGGGCGGCTGGCGCTGCCAGCCAGAGCGACCCAACAGGAGTCCACTGTGCAACAGCATACTGGTCCCCTGAATCGAAGAAAGTGGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS GCA 90 bp | GCCACACGGACTCTTTGCCAGGCCAGGAGAGTCTTGGGCACCACCTaGTTCAGCAGGGTTTTATTGTACACACTGTTTGTGGTCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ATRTLCQARRVLGTT*FSRVLLYTLFVVCS Trigger: GCTGCAGACCACAAACAGTGTGTACAATAAAACCCTGCTGAAGCAGGTGGTGCCCAAGACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 90 bp | TTGAAAATATCTGTGCCCACTCCTTACCACCCTCGGCCATCATGTTaGCCACACGGACTCTTTGCCAGGCCAGGAGAGTCTTGGGCACCA | + |
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Preference number: 5 (lower is better) Translates to: LKISVPTPYHPRPSC*PHGLFARPGESWAP Trigger: TGGTGCCCAAGACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGCCAACATGATGGCCGAGGGTGGTAAGGAGTGGGCACAGATATTTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 90 bp | AGATGTCTGCCACCTTGGTGTCATAGCATCCTCCAGGGCTTGGACTaGCTCCATTCAGGTCCTCACGACAGCAGATGGTACTGCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: RCLPPWCHSILQGLD*LHSGPHDSRWYCRD Trigger: ATCCCTGCAGTACCATCTGCTGTCGTGAGGACCTGAATGGAGCCAGTCCAAGCCCTGGAGGATGCTATGACACCAAGGTGGCAGACATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS GCA 90 bp | GGCTTGGACTGGCTCCATTCAGGTCCTCACGACAGCAGATGGTACTaGAGGGATCCCCCTTGCTGTAGGGGTCCTCTTTATAATTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: GLDWLHSGPHDSRWY*RDPPCCRGPLYNCC Trigger: ACAACAATTATAAAGAGGACCCCTACAGCAAGGGGGATCCCTGCAGTACCATCTGCTGTCGTGAGGACCTGAATGGAGCCAGTCCAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 90 bp | CCATCATGTTGGCCACACGGACTCTTTGCCAGGCCAGGAGAGTCTTaGGCACCACCTGCTTCAGCAGGGTTTTATTGTACACACTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: PSCWPHGLFARPGES*APPASAGFYCTHCL Trigger: CAAACAGTGTGTACAATAAAACCCTGCTGAAGCAGGTGGTGCCCAAGACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGCCAACATGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | CTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACCACAGTGGACTCCTGTaGGGTCGCTCTGGCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LRVPLVSYSQLSVISMSHHSGLL*GRSGWQ Trigger: CTGCCAGCCAGAGCGACCCAACAGGAGTCCACTGTG...GTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | GATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCCCCTCGGCCATCATGTaGGCCACACGGACTCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: DGKIQLRVPLVSYSQLSVPSAIM*ATRTLC Trigger: GCAAAGAGTCCGTGTGGCCAACATGATGGCCGAGGG...GACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | AAGAGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGGGCCACACGGACTCTTaGCCAGGCCAGGAGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: KSTDGKIQLRVPLVSYSQGHTDS*PGQESL Trigger: AAGACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGCC...CTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS TCA 90 bp | CATTGTAGTAGCCGTAGGCGTCCCCATTCTTGTCCAGTACCGTCTTaGTTTCCACTTTCTTCGATTCAGGGGACCAGTATGCTGTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: HCSSRRRPHSCPVPS*FPLSSIQGTSMLLH Trigger: GTGCAACAGCATACTGGTCCCCTGAATCGAAGAAAGTGGAAATCAAGACGGTACTGGACAAGAATGGGGACGCCTACGGCTACTACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS TCA 90 bp | GTCCAGGACCATGTACTGGTTGTTGTAGGTACCAGAGTTGTGCTTTaGAAATATCTGTGCCCACTCCTTACCACCCTCGGCCATCATGTT | + |
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Preference number: 5 (lower is better) Translates to: VQDHVLVVVGTRVVL*KYLCPLLTTLGHHV Trigger: AACATGATGGCCGAGGGTGGTAAGGAGTGGGCACAGATATTTTCAAAGCACAACTCTGGTACCTACAACAACCAGTACATGGTCCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS TCA 90 bp | TATATTTCATGGAGGCCATGTCCGTCACGTTCCCTTGGTCACGCCTaGAGATTTTGGCACGTGGAGCTAAGTCATAAGAGTAGTCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: YISWRPCPSRSLGHA*RFWHVELSHKSSPS Trigger: GCTTGGACTACTCTTATGACTTAGCTCCACGTGCCAAAATCTTCAGGCGTGACCAAGGGAACGTGACGGACATGGCCTCCATGAAATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | AGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTAGGCGGGAGTCCATCTaGTACCGTGGGACCACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: STDGKIQLRVPLVSYSQLRRESI*YRGTTN Trigger: ATTAGTGGTCCCACGGTACAAGATGGACTCCCGCCT...AAGCTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS TCA 90 bp | GGATTTGCTCCACAATATAGAGAGTGCCTTTGTCCAGGCTCCTATTaGTGGTCACCTTCTTCAGGTCCAGGACCATGTACTGGTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GFAPQYRECLCPGSY*WSPSSGPGPCTGCC Trigger: ACAACAACCAGTACATGGTCCTGGACCTGAAGAAGGTGACCATCAATAGGAGCCTGGACAAAGGCACTCTCTATATTGTGGAGCAAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS TCA 90 bp | GATCCCCCTTGCTGTAGGGGTCCTCTTTATAATTGTTGTATCGCATaGTATATTTCATGGAGGCCATGTCCGTCACGTTCCCTTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DPPCCRGPLYNCCIA*YISWRPCPSRSLGH Trigger: GTGACCAAGGGAACGTGACGGACATGGCCTCCATGAAATATATCATGCGATACAACAATTATAAAGAGGACCCCTACAGCAAGGGGGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | CTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTCATGCTGCTGCTTTTaGTGGGAGATAGGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRVPLVSYSQLSVISMSHSCCCF*WEIGRE Trigger: TTCCCTCCCTATCTCCCACAAAAAGCAGCAGCATGA...GTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS TCA 90 bp | AGGGAGGGAATAAGGTCCAACAGGTCACCAACGGCGTTCAGGAACTaGATTTGGAACATTGTCATGGGCTTTATTTTCTCTTCTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: REGIRSNRSPTAFRN*IWNIVMGFIFSSEA Trigger: GGCTTCAGAAGAGAAAATAAAGCCCATGACAATGTTCCAAATTCAGTTCCTGAACGCCGTTGGTGACCTGTTGGACCTTATTCCCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS GCA 90 bp | CCGGTGTGTCTCCAGAATGGGTCATCCTTCTGCGCTTTGATGTTTTaGCTAGTCCACATTTCTTGCTTCTCCATGAAGTCTTGCACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVCLQNGSSFCALMF*LVHISCFSMKSCTF Trigger: AAAAGTGCAAGACTTCATGGAGAAGCAAGAAATGTGGACTAGGCAAAACATCAAAGCGCAGAAGGATGACCCATTCTGGAGACACACCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 90 bp | GCCACTGCTGAGAATATAAAAGTCATCCAGAGACTCCAAGAACCCTaGATAACTGCTGAAAGACAGCCGTTTGCTGAGGGTGTATTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ATAENIKVIQRLQEP*ITAERQPFAEGVFV Trigger: GACAAATACACCCTCAGCAAACGGCTGTCTTTCAGCAGTTATCCAGGGTTCTTGGAGTCTCTGGATGACTTTTATATTCTCAGCAGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | AGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTCACGCCTGAAGATTTaGGCACGTGGAGCTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVPLVSYSQLSVISMSHFSRLKI*ARGAKS Trigger: TGACTTAGCTCCACGTGCCAAAATCTTCAGGCGTGA...AAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | AGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTACAATGGAAGGATTCTaGAACAGCTGTGGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVPLVSYSQLSVISMSHFTMEGF*NSCGYR Trigger: CCTGTACCCACAGCTGTTCAAGAATCCTTCCATTGT...AAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | GTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGTCATCCTTCTGCGCTTaGATGTTTTGCCTAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPLVSYSQLSVISMSHFLSSFCA*MFCLVH Trigger: GTGGACTAGGCAAAACATCAAAGCGCAGAAGGATGA...CAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | AGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTTTGTCCAGGCTCCTATaGATGGTCACCTTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAFGVLFAAFCHLYVSLFLSRLL*MVTFFR Trigger: CCTGAAGAAGGTGACCATCAATAGGAGCCTGGACAA...AAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACT 46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | GTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGCCTAGTCCACATTTCTaGCTTCTCCATGAAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPLVSYSQLSVISMSHFLPSPHF*LLHEVL Trigger: CAAGACTTCATGGAGAAGCAAGAAATGTGGACTAGG...CAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | GATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCGTTCAGGAACTGAATTaGGAACATTGTCATGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DGKIQLRVPLVSYSQLSVVQELN*EHCHGL Trigger: AAGCCCATGACAATGTTCCAAATTCAGTTCCTGAAC...GACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | GATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCTACCAGAGTTGTGCTTaGAAAATATCTGTGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DGKIQLRVPLVSYSQLSVYQSCA*KISVPT Trigger: AGTGGGCACAGATATTTTCAAAGCACAACTCTGGTA...GACAGAAAGCTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | TGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGTTTGCTGAGGGTGTATTaGTCCTTGATGTTGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLWCPIRSFLSSLCLTFCLLRVY*SLMLKS Trigger: GGACTTCAACATCAAGGACAAATACACCCTCAGCAA...ACAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | AAGAGTACAGATGGGAAAATACAGCTAAGAGTGCCTTTGGTGTCCTATTCGCAGCATATGTGTACCAACTaGAGTGGGCAAAATAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: KSTDGKIQLRVPLVSYSQHMCTN*SGQNRC Trigger: ACATCTATTTTGCCCACTCAAGTTGGTACACATATG...CTGCGAATAGGACACCAAAGGCACTCTTAGCTGTATTTTCCCATCTGTACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | GTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTGTATTGTACACACTGTTaGTGGTCTGCAGCAATATCA | + |
|
Preference number: 5 (lower is better) Translates to: VPLVSYSQLSVISMSHFLYCTHC*WSAAIS Trigger: TGATATTGCTGCAGACCACAAACAGTGTGTACAATA...CAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS-3UTR CAA 90 bp | AGTGCCTTTGGTGTCCTATTCGCAGCTTTCTGTCATCTCTATGTCTCACTTTTTTTCAGCAGGGTTTTATaGTACACACTGTTTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAFGVLFAAFCHLYVSLFFSRVL*YTLFVV Trigger: GACCACAAACAGTGTGTACAATAAAACCCTGCTGAA...AAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCAAAGGCACT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS GCA 72 bp | TCGCTCTGGCTGGCAGCGCCAGCCGCCCAGGGAGGCTaGAGCAGCAATGGCAGCAGCAGCAGCAGCGGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLWLAAPAAQGG*SSNGSSSSSGD Trigger: ATCGCCGCTGCTGCTGCTGCTGCCATTGCTGCTGCAGCCTCCCTGGGCGGCTGGCGCTGCCAGCCAGAGCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 72 bp | CTGCAGCAGCAATGGCAGCAGCAGCAGCAGCGGCGATaGCGGCCTGAGGCTCCTGCCAGGGCTGCGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQQQWQQQQQRR*RPEAPARAAVA Trigger: TGCCACCGCAGCCCTGGCAGGAGCCTCAGGCCGCCATCGCCGCTGCTGCTGCTGCTGCCATTGCTGCTGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 72 bp | CAGGGGACCAGTATGCTGTTGCACAGTGGACTCCTGTaGGGTCGCTCTGGCTGGCAGCGCCAGCCGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGTSMLLHSGLL*GRSGWQRQPPR Trigger: CCTGGGCGGCTGGCGCTGCCAGCCAGAGCGACCCAACAGGAGTCCACTGTGCAACAGCATACTGGTCCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | TCTTCGATTCAGGGGACCAGTATGCTGTTGCACAGTGGACTCCTGTaGGGTCGCTCTGGCTGGCAGCGCCAGCCGCCCAGGGAGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSIQGTSMLLHSGLL*GRSGWQRQPPREAA Trigger: TGCAGCCTCCCTGGGCGGCTGGCGCTGCCAGCCAGAGCGACCCAACAGGAGTCCACTGTGCAACAGCATACTGGTCCCCTGAATCGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | CCACTCCTTACCACCCTCGGCCATCATGTTGGCCACACGGACTCTTaGCCAGGCCAGGAGAGTCTTGGGCACCACCTGCTTCAGCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLLTTLGHHVGHTDS*PGQESLGHHLLQQG Trigger: ACCCTGCTGAAGCAGGTGGTGCCCAAGACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGCCAACATGATGGCCGAGGGTGGTAAGGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 72 bp | TCTGTGCCCACTCCTTACCACCCTCGGCCATCATGTTaGCCACACGGACTCTTTGCCAGGCCAGGAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVPTPYHPRPSC*PHGLFARPGES Trigger: AGACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGCCAACATGATGGCCGAGGGTGGTAAGGAGTGGGCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 72 bp | ATCTGTGCCCACTCCTTACCACCCTCGGCCATCATGTaGGCCACACGGACTCTTTGCCAGGCCAGGAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ICAHSLPPSAIM*ATRTLCQARRV Trigger: GACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGCCAACATGATGGCCGAGGGTGGTAAGGAGTGGGCACAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 72 bp | TTCTTCGATTCAGGGGACCAGTATGCTGTTGCACAGTaGACTCCTGTTGGGTCGCTCTGGCTGGCAGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FFDSGDQYAVAQ*TPVGSLWLAAP Trigger: TGGCGCTGCCAGCCAGAGCGACCCAACAGGAGTCCACTGTGCAACAGCATACTGGTCCCCTGAATCGAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 72 bp | TTGGACTGGCTCCATTCAGGTCCTCACGACAGCAGATaGTACTGCAGGGATCCCCCTTGCTGTAGGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LDWLHSGPHDSR*YCRDPPCCRGP Trigger: AGGACCCCTACAGCAAGGGGGATCCCTGCAGTACCATCTGCTGTCGTGAGGACCTGAATGGAGCCAGTCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | TTTGAAAATATCTGTGCCCACTCCTTACCACCCTCGGCCATCATGTaGGCCACACGGACTCTTTGCCAGGCCAGGAGAGTCTTGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: FENICAHSLPPSAIM*ATRTLCQARRVLGT Trigger: GGTGCCCAAGACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGCCAACATGATGGCCGAGGGTGGTAAGGAGTGGGCACAGATATTTTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS GCA 72 bp | TGGCTCCATTCAGGTCCTCACGACAGCAGATGGTACTaGAGGGATCCCCCTTGCTGTAGGGGTCCTCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: WLHSGPHDSRWY*RDPPCCRGPLY Trigger: ATAAAGAGGACCCCTACAGCAAGGGGGATCCCTGCAGTACCATCTGCTGTCGTGAGGACCTGAATGGAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | CAAGAAAGATGTCTGCCACCTTGGTGTCATAGCATCCTCCAGGGCTaGGACTGGCTCCATTCAGGTCCTCACGACAGCAGATGGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: QERCLPPWCHSILQG*DWLHSGPHDSRWYC Trigger: GCAGTACCATCTGCTGTCGTGAGGACCTGAATGGAGCCAGTCCAAGCCCTGGAGGATGCTATGACACCAAGGTGGCAGACATCTTTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | CAGGCCAGGAGAGTCTTGGGCACCACCTGCTTCAGCAGGGTTTTATaGTACACACTGTTTGTGGTCTGCAGCAATATCAGGCCACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QARRVLGTTCFSRVL*YTLFVVCSNIRPLL Trigger: CAGCAGTGGCCTGATATTGCTGCAGACCACAAACAGTGTGTACAATAAAACCCTGCTGAAGCAGGTGGTGCCCAAGACTCTCCTGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | GCCATCATGTTGGCCACACGGACTCTTTGCCAGGCCAGGAGAGTCTaGGGCACCACCTGCTTCAGCAGGGTTTTATTGTACACACTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AIMLATRTLCQARRV*GTTCFSRVLLYTLF Trigger: AAACAGTGTGTACAATAAAACCCTGCTGAAGCAGGTGGTGCCCAAGACTCTCCTGGCCTGGCAAAGAGTCCGTGTGGCCAACATGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS TCA 72 bp | TGGAGGCCATGTCCGTCACGTTCCCTTGGTCACGCCTaGAGATTTTGGCACGTGGAGCTAAGTCATAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: WRPCPSRSLGHA*RFWHVELSHKS Trigger: ACTCTTATGACTTAGCTCCACGTGCCAAAATCTTCAGGCGTGACCAAGGGAACGTGACGGACATGGCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS TCA 72 bp | AGCCGTAGGCGTCCCCATTCTTGTCCAGTACCGTCTTaGTTTCCACTTTCTTCGATTCAGGGGACCAGTATG | + |
|
Preference number: 6 (lower is better) Translates to: SRRRPHSCPVPS*FPLSSIQGTSM Trigger: CATACTGGTCCCCTGAATCGAAGAAAGTGGAAATCAAGACGGTACTGGACAAGAATGGGGACGCCTACGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS GCA 72 bp | CCTCACGACAGCAGATGGTACTGCAGGGATCCCCCTTaGTGTAGGGGTCCTCTTTATAATTGTTGTATCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PHDSRWYCRDPP*CRGPLYNCCIA Trigger: TGCGATACAACAATTATAAAGAGGACCCCTACAGCAAGGGGGATCCCTGCAGTACCATCTGCTGTCGTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | GGTCCAGGACCATGTACTGGTTGTTGTAGGTACCAGAGTTGTGCTTaGAAAATATCTGTGCCCACTCCTTACCACCCTCGGCCATCATGT | + |
|
Preference number: 6 (lower is better) Translates to: GPGPCTGCCRYQSCA*KISVPTPYHPRPSC Trigger: ACATGATGGCCGAGGGTGGTAAGGAGTGGGCACAGATATTTTCAAAGCACAACTCTGGTACCTACAACAACCAGTACATGGTCCTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CCA 72 bp | ATATATTTCATGGAGGCCATGTCCGTCACGTTCCCTTaGTCACGCCTGAAGATTTTGGCACGTGGAGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: IYFMEAMSVTFP*SRLKILARGAK Trigger: CTTAGCTCCACGTGCCAAAATCTTCAGGCGTGACCAAGGGAACGTGACGGACATGGCCTCCATGAAATATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 72 bp | CCGGTGTGTCTCCAGAATGGGTCATCCTTCTGCGCTTaGATGTTTTGCCTAGTCCACATTTCTTGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVCLQNGSSFCA*MFCLVHISCFS Trigger: GGAGAAGCAAGAAATGTGGACTAGGCAAAACATCAAAGCGCAGAAGGATGACCCATTCTGGAGACACACCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | GAGCGTGTCATTGAACCGATTCCAGTTAAAAGGCGGGAGTCCATCTaGTACCGTGGGACCACTAATGGCATAGGCTTTATACTGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: ERVIEPIPVKRRESI*YRGTTNGIGFILRC Trigger: GCATCTCAGTATAAAGCCTATGCCATTAGTGGTCCCACGGTACAAGATGGACTCCCGCCTTTTAACTGGAATCGGTTCAATGACACGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS TCA 72 bp | CCACAATATAGAGAGTGCCTTTGTCCAGGCTCCTATTaGTGGTCACCTTCTTCAGGTCCAGGACCATGTACT | + |
|
Preference number: 6 (lower is better) Translates to: PQYRECLCPGSY*WSPSSGPGPCT Trigger: AGTACATGGTCCTGGACCTGAAGAAGGTGACCATCAATAGGAGCCTGGACAAAGGCACTCTCTATATTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 72 bp | CCATGTACTGGTTGTTGTAGGTACCAGAGTTGTGCTTaGAAAATATCTGTGCCCACTCCTTACCACCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PCTGCCRYQSCA*KISVPTPYHPR Trigger: CCGAGGGTGGTAAGGAGTGGGCACAGATATTTTCAAAGCACAACTCTGGTACCTACAACAACCAGTACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | GCCGGTGTGTCTCCAGAATGGGTCATCCTTCTGCGCTTTGATGTTTaGCCTAGTCCACATTTCTTGCTTCTCCATGAAGTCTTGCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: AGVSPEWVILLRFDV*PSPHFLLLHEVLHF Trigger: AAAGTGCAAGACTTCATGGAGAAGCAAGAAATGTGGACTAGGCAAAACATCAAAGCGCAGAAGGATGACCCATTCTGGAGACACACCGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | GGTCCAACAGGTCACCAACGGCGTTCAGGAACTGAATTTGGAACATaGTCATGGGCTTTATTTTCTCTTCTGAAGCCCTTTTCTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPTGHQRRSGTEFGT*SWALFSLLKPFSEL Trigger: GAGCTCAGAAAAGGGCTTCAGAAGAGAAAATAAAGCCCATGACAATGTTCCAAATTCAGTTCCTGAACGCCGTTGGTGACCTGTTGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 90 bp | AGCCCAGCTTGTGAACCAGCAGAGGGTAGCCACTCCAGTTGTAGATaGTTTTGTGGAAAGGGATATTATAGGAAGCCCAGTATCCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPACEPAEGSHSSCR*FCGKGYYRKPSILF Trigger: GAAAAGGATACTGGGCTTCCTATAATATCCCTTTCCACAAAACAATCTACAACTGGAGTGGCTACCCTCTGCTGGTTCACAAGCTGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS GCA 72 bp | CTCCAGAATGGGTCATCCTTCTGCGCTTTGATGTTTTaGCTAGTCCACATTTCTTGCTTCTCCATGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQNGSSFCALMF*LVHISCFSMKS Trigger: AGACTTCATGGAGAAGCAAGAAATGTGGACTAGGCAAAACATCAAAGCGCAGAAGGATGACCCATTCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 72 bp | TCTCCAGAATGGGTCATCCTTCTGCGCTTTGATGTTTaGCCTAGTCCACATTTCTTGCTTCTCCATGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SPEWVILLRFDV*PSPHFLLLHEV Trigger: GACTTCATGGAGAAGCAAGAAATGTGGACTAGGCAAAACATCAAAGCGCAGAAGGATGACCCATTCTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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| CDS CAA 72 bp | ATTGAACCGATTCCAGTTAAAAGGCGGGAGTCCATCTaGTACCGTGGGACCACTAATGGCATAGGCTTTATA | + |
|
Preference number: 6 (lower is better) Translates to: IEPIPVKRRESI*YRGTTNGIGFI Trigger: TATAAAGCCTATGCCATTAGTGGTCCCACGGTACAAGATGGACTCCCGCCTTTTAACTGGAATCGGTTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
||
| CDS CAA 72 bp | ATTGGTTTGATCGGAGTATTCTACATATGTAGGGATTaGCTCCACAATATAGAGAGTGCCTTTGTCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IGLIGVFYICRD*LHNIESAFVQA Trigger: AGCCTGGACAAAGGCACTCTCTATATTGTGGAGCAAATCCCTACATATGTAGAATACTCCGATCAAACCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032336.7 |
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