Pregenerated sensors for PLAUR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046223Ensembl transcript IDs: ENSMUST00000002284.11, ENSMUST00000206514.2, ENSMUST00000206935.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGAGGTAACGGCCCTGGGGGAAAGCACGGCCTCGGGCTCCGGGTCTaGGCCTGTTGCAGAGGTTTGTGGCGCACACGGTCTCTGTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: RGNGPGGKHGLGLRV*ACCRGLWRTRSLSG Trigger: GCCTGACAGAGACCGTGTGCGCCACAAACCTCTGCAACAGGCCCAGACCCGGAGCCCGAGGCCGTGCTTTCCCCCAGGGCCGTTACCTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| 3UTR TCA 90 bp | TGGGGCTGTTACAGCCGCTGCCGTGGCAGCAGGAGACAGAGACGTTaGGGTGGGTCGGGAAGGAGTCTGCCACGTGGGAGCCTTGGCACC | + |
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Preference number: 1 (lower is better) Translates to: WGCYSRCRGSRRQRR*GGSGRSLPRGSLGT Trigger: GGTGCCAAGGCTCCCACGTGGCAGACTCCTTCCCGACCCACCTCAACGTCTCTGTCTCCTGCTGCCACGGCAGCGGCTGTAACAGCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR CCA 90 bp | CAGGAGACAGAGACGTTGAGGTGGGTCGGGAAGGAGTCTGCCACGTaGGAGCCTTGGCACCAGGAAGCCGTGGCGCAGCCTCTTACGGTA | + |
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Preference number: 1 (lower is better) Translates to: QETETLRWVGKESAT*EPWHQEAVAQPLTV Trigger: TACCGTAAGAGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGGCAGACTCCTTCCCGACCCACCTCAACGTCTCTGTCTCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR CCA 90 bp | TCGGGAAGGAGTCTGCCACGTGGGAGCCTTGGCACCAGGAAGCCGTaGCGCAGCCTCTTACGGTATAACTCCGGTTTCCCAGCACATCTA | + |
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Preference number: 1 (lower is better) Translates to: SGRSLPRGSLGTRKP*RSLLRYNSGFPAHL Trigger: TAGATGTGCTGGGAAACCGGAGTTATACCGTAAGAGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGGCAGACTCCTTCCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR TCA 90 bp | AAAACAGCTTTAGTCCCTCAGAAGCTCCAAGGTCCAGCCAGCCCATaGCACTCCTGGCCGCAGAGTCACTCATCTCCAGGGCCAACCCTT | + |
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Preference number: 1 (lower is better) Translates to: KTALVPQKLQGPASP*HSWPQSHSSPGPTL Trigger: AAGGGTTGGCCCTGGAGATGAGTGACTCTGCGGCCAGGAGTGTCATGGGCTGGCTGGACCTTGGAGCTTCTGAGGGACTAAAGCTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| 3UTR GCA 90 bp | AACACTTCAGGAAGTGAAAGGTCTGGTTGCTATGGAAACCTGCTGTaGCTGGGCATCCGGGAAGACTGCCACAGCCTCGGGTGTAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: NTSGSERSGCYGNLL*LGIREDCHSLGCSP Trigger: AGGACTACACCCGAGGCTGTGGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATAGCAACCAGACCTTTCACTTCCTGAAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR GCA 90 bp | GTTGCAACACTTCAGGAAGTGAAAGGTCTGGTTGCTATGGAAACCTaGTGTGCCTGGGCATCCGGGAAGACTGCCACAGCCTCGGGTGTA | + |
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Preference number: 1 (lower is better) Translates to: VATLQEVKGLVAMET*CAWASGKTATASGV Trigger: TACACCCGAGGCTGTGGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATAGCAACCAGACCTTTCACTTCCTGAAGTGTTGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR GCA 90 bp | TGCAGTGGGTGTAGTTGCAACACTTCAGGAAGTGAAAGGTCTGGTTaGTATGGAAACCTGCTGTGCCTGGGCATCCGGGAAGACTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: CSGCSCNTSGSERSG*YGNLLCLGIREDCH Trigger: GTGGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATAGCAACCAGACCTTTCACTTCCTGAAGTGTTGCAACTACACCCACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR CCA 90 bp | AAGGGTATTGTTCCCCTCACAGCTGTAACACTGGAAGCCATTCGGTaGAAAGCTCTGAAGATCCAGAACTGGGCCACCATTGCAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: KGIVPLTAVTLEAIR*KALKIQNWATIAVG Trigger: ACCCACTGCAATGGTGGCCCAGTTCTGGATCTTCAGAGCTTTCCACCGAATGGCTTCCAGTGTTACAGCTGTGAGGGGAACAATACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR GCA 90 bp | AGCCATTCGGTGGAAAGCTCTGAAGATCCAGAACTGGGCCACCATTaGAGTGGGTGTAGTTGCAACACTTCAGGAAGTGAAAGGTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: SHSVESSEDPELGHH*SGCSCNTSGSERSG Trigger: ACCAGACCTTTCACTTCCTGAAGTGTTGCAACTACACCCACTGCAATGGTGGCCCAGTTCTGGATCTTCAGAGCTTTCCACCGAATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR GCA 90 bp | AGCTCTGAAGATCCAGAACTGGGCCACCATTGCAGTGGGTGTAGTTaGAACACTTCAGGAAGTGAAAGGTCTGGTTGCTATGGAAACCTG | + |
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Preference number: 1 (lower is better) Translates to: SSEDPELGHHCSGCS*NTSGSERSGCYGNL Trigger: CAGGTTTCCATAGCAACCAGACCTTTCACTTCCTGAAGTGTTGCAACTACACCCACTGCAATGGTGGCCCAGTTCTGGATCTTCAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR TCA 90 bp | TGCCCGCAGCCCTTGTTCCAATTCTCTTCTGGTTCATGGAAAAACTaGGGTCCAAAGAAGACAACACGAGGGCACACACATCCTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: CPQPLFQFSSGSWKN*GPKKTTRGHTHPQR Trigger: TCTTTGAGGATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCAGAAGAGAATTGGAACAAGGGCTGCGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| 3UTR GCA 90 bp | ATAATAATAATAACAGCAACAATATTATCTCAACTAAGAGGCCCCTaGTGCCCGCAGCCCTTGTTCCAATTCTCTTCTGGTTCATGGAAA | + |
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Preference number: 1 (lower is better) Translates to: IIIITATILSQLRGP*CPQPLFQFSSGSWK Trigger: TTTCCATGAACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCTCTTAGTTGAGATAATATTGTTGCTGTTATTATTATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCAGGGCTGCCGGCTCAGGAGTCAGGTCCAGAGGAGGACGCCCCATAGTCGGCTGTTACAGCCGCTaGCGTGGCAGCAGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: PARAAGSGVRSRGGRPIVGCYSR*RGSRRQ Trigger: CTGTCTCCTGCTGCCACGGCAGCGGCTGTAACAGCC...GACTATGGGGCGTCCTCCTCTGGACCTGACTCCTGAGCCGGCAGCCCTGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR CAA 90 bp | GTGGGGCTGTTACAGCCGCTGCCGTGGCAGCAGGAGACAGAGACGTaGAGGTGGGTCGGGAAGGAGTCTGCCACGTGGGAGCCTTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: VGLLQPLPWQQETET*RWVGKESATWEPWH Trigger: GTGCCAAGGCTCCCACGTGGCAGACTCCTTCCCGACCCACCTCAACGTCTCTGTCTCCTGCTGCCACGGCAGCGGCTGTAACAGCCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR CAA 90 bp | AGAGACGTTGAGGTGGGTCGGGAAGGAGTCTGCCACGTGGGAGCCTaGGCACCAGGAAGCCGTGGCGCAGCCTCTTACGGTATAACTCCG | + |
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Preference number: 2 (lower is better) Translates to: RDVEVGREGVCHVGA*APGSRGAASYGITP Trigger: CGGAGTTATACCGTAAGAGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGGCAGACTCCTTCCCGACCCACCTCAACGTCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR-3UTR TCA 90 bp | CCACGTGGGAGCCTTGGCACCAGGAAGCCGTGGCGCAGCCTCTTACGGTATAACGTAGCCACCAGGCACTaGTTCATTGGTCCCCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PRGSLGTRKPWRSLLRYNVATRH*FIGPRQ Trigger: CTGCCGGGGACCAATGAATCAGTGCCTGGTGGCTAC...GTTATACCGTAAGAGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCCCATGCGGTAACTCATGGTCCTGTTGGTCTTTTCGCTGTGGGCACAGCGGTCCAGCCAGCCCATaGCACTCCTGGCCGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: WSPCGNSWSCWSFRCGHSGPASP*HSWPQS Trigger: ACTCTGCGGCCAGGAGTGTCATGGGCTGGCTGGACC...GCTGTGCCCACAGCGAAAAGACCAACAGGACCATGAGTTACCGCATGGGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGCTCCCGGCCCCTCTCACAGCTCTGGTCCAAAGAGGTGCAGGACGCACATTGGTCTTTTCGCTGTaGGCACAGCCTCTTGTCACC | + |
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Preference number: 2 (lower is better) Translates to: ALLPAPLTALVQRGAGRTLVFSL*AQPLVT Trigger: GGTGACAAGAGGCTGTGCCCACAGCGAAAAGACCAA...TGTGCGTCCTGCACCTCTTTGGACCAGAGCTGTGAGAGGGGCCGGGAGCAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| 3UTR-3UTR GCA 90 bp | CCACGTGGGAGCCTTGGCACCAGGAAGCCGTGGCGCAGCCTCTTACGGTATAACAGTGAAAGGTCTGGTTaGTATGGAAACCTGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: PRGSLGTRKPWRSLLRYNSERSG*YGNLLC Trigger: GCACAGCAGGTTTCCATAGCAACCAGACCTTTCACT...GTTATACCGTAAGAGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR-3UTR CCA 90 bp | AGACGCCTCTTCGGAGGAACACCCAAGGGTATTGTTCCCCTCACAGCTGTAACAGAAACCTGCTGTGCCTaGGCATCCGGGAAGACTGCC | + |
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Preference number: 2 (lower is better) Translates to: RRLFGGTPKGIVPLTAVTETCCA*ASGKTA Trigger: GGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTC...TGTTACAGCTGTGAGGGGAACAATACCCTTGGGTGTTCCTCCGAAGAGGCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTTGTTCACGGAGTCAAAAGACCCTaGGTCCAGCCAGGGCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: CSHLPKLNVTVGRPNLVHGVKRP*VQPGLP Trigger: CGGCAGCCCTGGCTGGACCCAGGGTCTTTTGACTCC...GTGAACAAGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| 3UTR-3UTR CCA 90 bp | ATTGTTCCCCTCACAGCTGTAACACTGGAAGCCATTCGGTGGAAAGCTCTGAAGGGAGTCAAAAGACCCTaGGTCCAGCCAGGGCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: IVPLTAVTLEAIRWKALKGVKRP*VQPGLP Trigger: CGGCAGCCCTGGCTGGACCCAGGGTCTTTTGACTCC...CTTCAGAGCTTTCCACCGAATGGCTTCCAGTGTTACAGCTGTGAGGGGAACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAACTGGGCCACCATTGCAGTGGGTGTAGTTGCAACACTTCAGGAAGTGAATATGGAAACCTGCTGTaGCTGGGCATCCGGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PELGHHCSGCSCNTSGSEYGNLL*LGIRED Trigger: GTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATA...TTCACTTCCTGAAGTGTTGCAACTACACCCACTGCAATGGTGGCCCAGTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATCCTTACAGCCGCTGCCGTaGCAGCAGGAGACAGAGACG | + |
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Preference number: 2 (lower is better) Translates to: WFMEKLRSKEDNTRAHTSLQPLP*QQETET Trigger: CGTCTCTGTCTCCTGCTGCCACGGCAGCGGCTGTAA...GGATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATCCGTTCCAATTCTCTTCTaGTTCATGGAAAAACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: WFMEKLRSKEDNTRAHTSVPILF*FMEKLR Trigger: CCTCAGTTTTTCCATGAACCAGAAGAGAATTGGAAC...GGATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| 3UTR CCA 72 bp | GGCCCTGGGGGAAAGCACGGCCTCGGGCTCCGGGTCTaGGCCTGTTGCAGAGGTTTGTGGCGCACACGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GPGGKHGLGLRV*ACCRGLWRTRS Trigger: AGACCGTGTGCGCCACAAACCTCTGCAACAGGCCCAGACCCGGAGCCCGAGGCCGTGCTTTCCCCCAGGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| 3UTR GCA 72 bp | GGGAGGGAGTCAAAAGACCCTGGGTCCAGCCAGGGCTaGCGGCTCAGGAGTCAGGTCCAGAGGAGGACGCCC | + |
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Preference number: 3 (lower is better) Translates to: GRESKDPGSSQG*RLRSQVQRRTP Trigger: GGGCGTCCTCCTCTGGACCTGACTCCTGAGCCGGCAGCCCTGGCTGGACCCAGGGTCTTTTGACTCCCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR GCA 72 bp | GCTCCCGGCCCCTCTCACAGCTCTGGTCCAAAGAGGTaGAGGACGCACACTCGAGGTAACGGCCCTGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: APGPSHSSGPKR*RTHTRGNGPGG Trigger: TCCCCCAGGGCCGTTACCTCGAGTGTGCGTCCTGCACCTCTTTGGACCAGAGCTGTGAGAGGGGCCGGGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| 3UTR CCA 72 bp | GAGACGTTGAGGTGGGTCGGGAAGGAGTCTGCCACGTaGGAGCCTTGGCACCAGGAAGCCGTGGCGCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: ETLRWVGKESAT*EPWHQEAVAQP Trigger: AGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGGCAGACTCCTTCCCGACCCACCTCAACGTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR-3UTR CAA 90 bp | GTCCAGAGGAGGACGCCCCATAGTCCGAGGGTCAGGAGCAGAGAGGCAATGAGGTGCCACGTGGGAGCCTaGGCACCAGGAAGCCGTGGC | + |
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Preference number: 3 (lower is better) Translates to: VQRRTPHSPRVRSREAMRCHVGA*APGSRG Trigger: GCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGGCA...CCTCATTGCCTCTCTGCTCCTGACCCTCGGACTATGGGGCGTCCTCCTCTGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR TCA 72 bp | TACAGCCGCTGCCGTGGCAGCAGGAGACAGAGACGTTaGGGTGGGTCGGGAAGGAGTCTGCCACGTGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: YSRCRGSRRQRR*GGSGRSLPRGS Trigger: GCTCCCACGTGGCAGACTCCTTCCCGACCCACCTCAACGTCTCTGTCTCCTGCTGCCACGGCAGCGGCTGTA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR CCA 72 bp | AGGTGGGTCGGGAAGGAGTCTGCCACGTGGGAGCCTTaGCACCAGGAAGCCGTGGCGCAGCCTCTTACGGTA | + |
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Preference number: 3 (lower is better) Translates to: RWVGKESATWEP*HQEAVAQPLTV Trigger: TACCGTAAGAGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGGCAGACTCCTTCCCGACCCACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCTCACAGCTCTGGTCCAAAGAGGTGCAGGACGCACACTCGAGGTAACGGCCCCGGGTCTGGGCCTGTaGCAGAGGTTTGTGGCGCAC | + |
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Preference number: 3 (lower is better) Translates to: PLTALVQRGAGRTLEVTAPGLGL*QRFVAH Trigger: GTGCGCCACAAACCTCTGCAACAGGCCCAGACCCGG...GGCCGTTACCTCGAGTGTGCGTCCTGCACCTCTTTGGACCAGAGCTGTGAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCCTCTCACAGCTCTGGTCCAAAGAGGTGCAGGACGCACACTCGAGGTAACGTGTGGGCACAGCCTCTaGTCACCACCTCCAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: APLTALVQRGAGRTLEVTCGHSL*SPPPAL Trigger: GAGAGCTGGAGGTGGTGACAAGAGGCTGTGCCCACA...CGTTACCTCGAGTGTGCGTCCTGCACCTCTTTGGACCAGAGCTGTGAGAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| 3UTR GCA 72 bp | GGAAGTGAAAGGTCTGGTTGCTATGGAAACCTGCTGTaGCTGGGCATCCGGGAAGACTGCCACAGCCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: GSERSGCYGNLL*LGIREDCHSLG Trigger: CCCGAGGCTGTGGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATAGCAACCAGACCTTTCACTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR GCA 72 bp | TATGGAAACCTGCTGTGCCTGGGCATCCGGGAAGACTaGCACAGCCTCGGGTGTAGTCCTCATCCTTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: YGNLLCLGIRED*HSLGCSPHPSS Trigger: GCTTGAAGGATGAGGACTACACCCGAGGCTGTGGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR CCA 72 bp | GTGAAAGGTCTGGTTGCTATGGAAACCTGCTGTGCCTaGGCATCCGGGAAGACTGCCACAGCCTCGGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: VKGLVAMETCCA*ASGKTATASGV Trigger: TACACCCGAGGCTGTGGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATAGCAACCAGACCTTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR CCA 72 bp | CCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCTaGTTCATGGAAAAACTGAGGTCCAAAGAAGACAAC | + |
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Preference number: 3 (lower is better) Translates to: PLLPAALVPILF*FMEKLRSKEDN Trigger: GTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| 3UTR CCA 72 bp | GAAGCCATTCGGTGGAAAGCTCTGAAGATCCAGAACTaGGCCACCATTGCAGTGGGTGTAGTTGCAACACTT | + |
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Preference number: 3 (lower is better) Translates to: EAIRWKALKIQN*ATIAVGVVATL Trigger: AAGTGTTGCAACTACACCCACTGCAATGGTGGCCCAGTTCTGGATCTTCAGAGCTTTCCACCGAATGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| 3UTR GCA 72 bp | ATAACAGCAACAATATTATCTCAACTAAGAGGCCCCTaGTGCCCGCAGCCCTTGTTCCAATTCTCTTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: ITATILSQLRGP*CPQPLFQFSSG Trigger: ACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCTCTTAGTTGAGATAATATTGTTGCTGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| 3UTR TCA 72 bp | CCCTTGTTCCAATTCTCTTCTGGTTCATGGAAAAACTaGGGTCCAAAGAAGACAACACGAGGGCACACACAT | + |
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Preference number: 3 (lower is better) Translates to: PLFQFSSGSWKN*GPKKTTRGHTH Trigger: ATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCAGAAGAGAATTGGAACAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| 3UTR TCA 72 bp | TATAAAGTAAGTTCCAGGGCAGCTAGGGCTACATGGTaGGATCCTGTCTCAAAGCAAAAATCAATCAATCAA | + |
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Preference number: 3 (lower is better) Translates to: YKVSSRAARATW*DPVSKQKSINQ Trigger: TTGATTGATTGATTTTTGCTTTGAGACAGGATCTCACCATGTAGCCCTAGCTGCCCTGGAACTTACTTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| 3UTR CAA 72 bp | GAGGTGGGTCGGGAAGGAGTCTGCCACGTGGGAGCCTaGGCACCAGGAAGCCGTGGCGCAGCCTCTTACGGT | + |
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Preference number: 4 (lower is better) Translates to: EVGREGVCHVGA*APGSRGAASYG Trigger: ACCGTAAGAGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGGCAGACTCCTTCCCGACCCACCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS-3UTR CCA 90 bp | CCACGTGGGAGCCTTGGCACCAGGAAGCCGTGGCGCAGCCTCTTACGGTATAACGTCCTGCAGAGGTCCTaGCCCAGAGCACACTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRGSLGTRKPWRSLLRYNVLQRS*PRAHSS Trigger: AGAGGAGTGTGCTCTGGGCCAGGACCTCTGCAGGAC...GTTATACCGTAAGAGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS-3UTR CCA 90 bp | CCTCTCACAGCTCTGGTCCAAAGAGGTGCAGGACGCACACTCGAGGTAACGGCCATGCACTGCAGGCCCTaGGAGGCTGGGACACAGGTA | + |
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Preference number: 4 (lower is better) Translates to: PLTALVQRGAGRTLEVTAMHCRP*EAGTQV Trigger: TACCTGTGTCCCAGCCTCCCAGGGCCTGCAGTGCAT...GGCCGTTACCTCGAGTGTGCGTCCTGCACCTCTTTGGACCAGAGCTGTGAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGGGCTGCCGGCTCAGGAGTCAGGTCCAGAGGAGGACGCCCCATAGTCTCTACCAGGCAGCTCTaGTTACTCTCACACTGCATG | + |
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Preference number: 4 (lower is better) Translates to: PARAAGSGVRSRGGRPIVSTRQL*LLSHCM Trigger: CATGCAGTGTGAGAGTAACCAGAGCTGCCTGGTAGA...GACTATGGGGCGTCCTCCTCTGGACCTGACTCCTGAGCCGGCAGCCCTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS-3UTR TCA 90 bp | CCAGCCAGGGCTGCCGGCTCAGGAGTCAGGTCCAGAGGAGGACGCCCCATAGTCTCTGCTCCCAGGACTTaGAGATCTCTACTAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PARAAGSGVRSRGGRPIVSAPRT*RSLLGV Trigger: AACTCCTAGTAGAGATCTTCAAGTCCTGGGAGCAGA...GACTATGGGGCGTCCTCCTCTGGACCTGACTCCTGAGCCGGCAGCCCTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS-3UTR GCA 90 bp | GGAGCCTTGGCACCAGGAAGCCGTGGCGCAGCCTCTTACGGTATAACTCCGGTTTACTCTCACACTGCATaGACTGCAGGCCCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GALAPGSRGAASYGITPVYSHTA*TAGPGR Trigger: CCTCCCAGGGCCTGCAGTGCATGCAGTGTGAGAGTA...AACCGGAGTTATACCGTAAGAGGCTGCGCCACGGCTTCCTGGTGCCAAGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCTGGTTCATGGAAAAAGCCACGTGGGAGCCTTaGCACCAGGAAGCCGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLPAALVPILFWFMEKATWEP*HQEAVA Trigger: CGCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGGC...TTTTTCCATGAACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR GCA 90 bp | AGGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCTGGTTCATGGAAAAACGGCATTGCAGGCTTTaGTCCCGGCCCCTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLPAALVPILFWFMEKRHCRL*SRPLSQ Trigger: CTGTGAGAGGGGCCGGGAGCAAAGCCTGCAATGCCG...TTTTTCCATGAACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
||
| CDS-3UTR GCA 90 bp | ACGCCTCTTCGGAGGAACACCCAAGGGTATTGTTCCCCTCACAGCTGTAACACTCGGCATTGCAGGCTTTaGTCCCGGCCCCTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPLRRNTQGYCSPHSCNTRHCRL*SRPLSQ Trigger: CTGTGAGAGGGGCCGGGAGCAAAGCCTGCAATGCCG...AGTGTTACAGCTGTGAGGGGAACAATACCCTTGGGTGTTCCTCCGAAGAGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
||
| CDS-3UTR GCA 90 bp | ATTATCTCAACTAAGAGGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCTCACACTGCATGCACTaGAGGCCCTGGGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IISTKRPLLPAALVPILFSHCMH*RPWEAG Trigger: CCCAGCCTCCCAGGGCCTGCAGTGCATGCAGTGTGA...GAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCTCTTAGTTGAGATAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGCTGCTCTCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTTGAAACCTGCTGTGCCTaGGCATCCGGGAAGACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCCSHLPKLNVTVGRPNLETCCA*ASGKTA Trigger: GGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTC...AAGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGAGAGCAGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR CCA 90 bp | GGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCTGGTTCATGGAAAAACAAGGAGTCTGCCACGTaGGAGCCTTGGCACCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPCCPQPLFQFSSGSWKNKESAT*EPWHQE Trigger: TTCCTGGTGCCAAGGCTCCCACGTGGCAGACTCCTT...GTTTTTCCATGAACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR CCA 90 bp | AGGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCTGGTTCATGGAAAAATTACAGCCGCTGCCGTaGCAGCAGGAGACAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLPAALVPILFWFMEKLQPLP*QQETET Trigger: CGTCTCTGTCTCCTGCTGCCACGGCAGCGGCTGTAA...TTTTTCCATGAACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR GCA 90 bp | ATTGTTCCCCTCACAGCTGTAACACTGGAAGCCATTCGGTGGAAAGCTCTGAAGTCACACTGCATGCACTaGAGGCCCTGGGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVPLTAVTLEAIRWKALKSHCMH*RPWEAG Trigger: CCCAGCCTCCCAGGGCCTGCAGTGCATGCAGTGTGA...CTTCAGAGCTTTCCACCGAATGGCTTCCAGTGTTACAGCTGTGAGGGGAACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAACTGGGCCACCATTGCAGTGGGTGTAGTTGCAACACTTCAGGAAGTGAAATGCACTGCAGGCCCTaGGAGGCTGGGACACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PELGHHCSGCSCNTSGSEMHCRP*EAGTQV Trigger: TACCTGTGTCCCAGCCTCCCAGGGCCTGCAGTGCAT...TTCACTTCCTGAAGTGTTGCAACTACACCCACTGCAATGGTGGCCCAGTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGTCCAGCCAGCCCATGACACTCCTGGCCGCAGAGTCACTCATCTCCAGCCTGTACACGTCACGTaGATTTTCAGGATCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKVQPAHDTPGRRVTHLQPVHVT*IFRILP Trigger: TGGCAAGATCCTGAAAATCCACGTGACGTGTACAGG...CTGGAGATGAGTGACTCTGCGGCCAGGAGTGTCATGGGCTGGCTGGACCTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATCCTCAAAGATGGCAATGAGGCTGAGTTaGGCAGGGCCTGGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKLRSKEDNTRAHTSSKMAMRLS*AGPGLG Trigger: CCCCAGGCCAGGCCCTGCTCAACTCAGCCTCATTGC...CATCTTTGAGGATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR GCA 90 bp | CACCACCTCCAGCTCTCTATCATCTGTGAGGAAAACAGCTTTAGTCCCTCAGAATCACACTGCATGCACTaGAGGCCCTGGGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HHLQLSIICEENSFSPSESHCMH*RPWEAG Trigger: CCCAGCCTCCCAGGGCCTGCAGTGCATGCAGTGTGA...TTCTGAGGGACTAAAGCTGTTTTCCTCACAGATGATAGAGAGCTGGAGGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGCTGCTCTCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTTCTGGTCCAAAGAGGTaGAGGACGCACACTCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSSSQAKCDSGETQPSGPKR*RTHTRG Trigger: ACCTCGAGTGTGCGTCCTGCACCTCTTTGGACCAGA...AGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGAGAGCAGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR GCA 90 bp | TCCCTGCTGCTCTCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTTATGGAAACCTGCTGTaGCTGGGCATCCGGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSSSQAKCDSGETQPYGNLL*LGIRED Trigger: GTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATA...AGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGAGAGCAGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR GCA 90 bp | GAGGTTTGTGGCGCACACGGTCTCTGTCAGGCTGATGATCATGGAGCCCATGCGGGATTTTCAGGATCTTaGCATTCCCGAAGCACGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EVCGAHGLCQADDHGAHAGFSGS*HSRSTV Trigger: TACCGTGCTTCGGGAATGGCAAGATCCTGAAAATCC...CGCATGGGCTCCATGATCATCAGCCTGACAGAGACCGTGTGCGCCACAAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
||
| CDS-3UTR CCA 90 bp | ATTATCTCAACTAAGAGGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCACAGAGACGTTGAGGTaGGTCGGGAAGGAGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IISTKRPLLPAALVPILFTETLR*VGKESA Trigger: GGCAGACTCCTTCCCGACCCACCTCAACGTCTCTGT...GAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCTCTTAGTTGAGATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR TCA 90 bp | AAGGTCTGGTTGCTATGGAAACCTGCTGTGCCTGGGCATCCGGGAAGACTGCCAAGAATGTTGGTCCCGTaGCTGTGTGTGGATTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVWLLWKPAVPGHPGRLPRMLVP*LCVDSV Trigger: AACTGAATCCACACACAGTCACGGGACCAACATTCT...TGGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATAGCAACCAGACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
||
| CDS-3UTR TCA 90 bp | AGACGCCTCTTCGGAGGAACACCCAAGGGTATTGTTCCCCTCACAGCTGTAACAGGAACTTCCAGTCACTaGGAATGTTGGTCCCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRLFGGTPKGIVPLTAVTGTSSH*ECWSRD Trigger: GTCACGGGACCAACATTCTCAGTGACTGGAAGTTCC...TGTTACAGCTGTGAGGGGAACAATACCCTTGGGTGTTCCTCCGAAGAGGCGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCTGGTTCATGGAAAAACTCAAGCTCCTTTCTGTaGTCTGGAGGGTCACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPCCPQPLFQFSSGSWKNSSSFL*SGGSPL Trigger: AAGTGGTGACCCTCCAGAGCACAGAAAGGAGCTTGA...GTTTTTCCATGAACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR CCA 90 bp | CTTCTGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATGCACTGCAGGCCCTaGGAGGCTGGGACACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLVHGKTEVQRRQHEGTHMHCRP*EAGTQV Trigger: TACCTGTGTCCCAGCCTCCCAGGGCCTGCAGTGCAT...GTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS-3UTR CCA 90 bp | TCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTTGTTCACTGGTAGTCCTGCAGAGGTCCTaGCCCAGAGCACACTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSQAKCDSGETQPCSLVVLQRS*PRAHSS Trigger: AGAGGAGTGTGCTCTGGGCCAGGACCTCTGCAGGAC...TACCAGTGAACAAGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR CCA 90 bp | TCTTGTCACCACCTCCAGCTCTCTATCATCTGTGAGGAAAACAGCTTTAGTCCCGTCCTGCAGAGGTCCTaGCCCAGAGCACACTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCHHLQLSIICEENSFSPVLQRS*PRAHSS Trigger: AGAGGAGTGTGCTCTGGGCCAGGACCTCTGCAGGAC...GGGACTAAAGCTGTTTTCCTCACAGATGATAGAGAGCTGGAGGTGGTGACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGCTGCTCTCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTCTGAAGATCCAGAACTaGGCCACCATTGCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSSSQAKCDSGETQPLKIQN*ATIAVG Trigger: ACCCACTGCAATGGTGGCCCAGTTCTGGATCTTCAG...AGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGAGAGCAGCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR TCA 90 bp | GAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATCCTCAAAGATGGTAGCCACCAGGCACTaGTTCATTGGTCCCCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKLRSKEDNTRAHTSSKMVATRH*FIGPRQ Trigger: CTGCCGGGGACCAATGAATCAGTGCCTGGTGGCTAC...CATCTTTGAGGATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR GCA 90 bp | CTTCTGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACTACTCTCACACTGCATaGACTGCAGGCCCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVHGKTEVQRRQHEGTHYSHTA*TAGPGR Trigger: CCTCCCAGGGCCTGCAGTGCATGCAGTGTGAGAGTA...GTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS-3UTR GCA 90 bp | CAAGCTAAATGTGACAGTGGGGAGACCCAACCTTGTTCACTGGTACAAAAATCTGGCTGTTACAGCCGCTaGCGTGGCAGCAGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QAKCDSGETQPCSLVQKSGCYSR*RGSRRQ Trigger: CTGTCTCCTGCTGCCACGGCAGCGGCTGTAACAGCC...AGATTTTTGTACCAGTGAACAAGGTTGGGTCTCCCCACTGTCACATTTAGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR CCA 90 bp | TCCCTGCTGCTCTCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTTCTACCAGGCAGCTCTaGTTACTCTCACACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSSSQAKCDSGETQPSTRQL*LLSHCM Trigger: CATGCAGTGTGAGAGTAACCAGAGCTGCCTGGTAGA...AGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGAGAGCAGCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR GCA 90 bp | TGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATCCTCTGGTCCAAAGAGGTaGAGGACGCACACTCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WFMEKLRSKEDNTRAHTSSGPKR*RTHTRG Trigger: ACCTCGAGTGTGCGTCCTGCACCTCTTTGGACCAGA...GGATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS-3UTR CCA 90 bp | TCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTTGTTCACTGGTATTGGTCTTTTCGCTGTaGGCACAGCCTCTTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSSQAKCDSGETQPCSLVLVFSL*AQPLVT Trigger: GGTGACAAGAGGCTGTGCCCACAGCGAAAAGACCAA...TACCAGTGAACAAGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR CCA 90 bp | CTTCTGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACTTGGTCTTTTCGCTGTaGGCACAGCCTCTTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLVHGKTEVQRRQHEGTHLVFSL*AQPLVT Trigger: GGTGACAAGAGGCTGTGCCCACAGCGAAAAGACCAA...GTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS-3UTR GCA 90 bp | ATTATCTCAACTAAGAGGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCTGCAGTGGGTGTAGTTaGAACACTTCAGGAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IISTKRPLLPAALVPILFCSGCS*NTSGSE Trigger: TTCACTTCCTGAAGTGTTGCAACTACACCCACTGCA...GAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCTCTTAGTTGAGATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR GCA 90 bp | TGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATCCAGTGAAAGGTCTGGTTaGTATGGAAACCTGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WFMEKLRSKEDNTRAHTSSERSG*YGNLLC Trigger: GCACAGCAGGTTTCCATAGCAACCAGACCTTTCACT...GGATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR GCA 90 bp | TGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATCCATCTCTACTAGGAGTTaGCCAGCAGATGGGAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WFMEKLRSKEDNTRAHTSISTRS*PADGSL Trigger: TAAGCTCCCATCTGCTGGGCAACTCCTAGTAGAGAT...GGATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
||
| CDS GCA 90 bp | GCAGGCTTTGCTCCCGGCCCCTCTCACAGCTCTGGTCCAAAGAGGTaGAGGACGCACACTCGAGGTAACGGCCCTGGGGGAAAGCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGFAPGPSHSSGPKR*RTHTRGNGPGGKHG Trigger: GCCGTGCTTTCCCCCAGGGCCGTTACCTCGAGTGTGCGTCCTGCACCTCTTTGGACCAGAGCTGTGAGAGGGGCCGGGAGCAAAGCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
||
| CDS CCA 90 bp | GCTCTGGTTACTCTCACACTGCATGCACTGCAGGCCCTGGGAGGCTaGGACACAGGTAGTCGCCAGCAACAGCAGCAGCAGCAGCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALVTLTLHALQALGG*DTGSRQQQQQQQPP Trigger: AGGCGGCTGCTGCTGCTGCTGTTGCTGGCGACTACCTGTGTCCCAGCCTCCCAGGGCCTGCAGTGCATGCAGTGTGAGAGTAACCAGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 ENSMUST00000206935.2 |
||
| CDS GCA 90 bp | CACTCCTCTACCAGGCAGCTCTGGTTACTCTCACACTGCATGCACTaGAGGCCCTGGGAGGCTGGGACACAGGTAGTCGCCAGCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSTRQLWLLSHCMH*RPWEAGTQVVASNS Trigger: GCTGTTGCTGGCGACTACCTGTGTCCCAGCCTCCCAGGGCCTGCAGTGCATGCAGTGTGAGAGTAACCAGAGCTGCCTGGTAGAGGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 ENSMUST00000206935.2 |
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| CDS-3UTR CAA 90 bp | CTGGGCATCCGGGAAGACTGCCACAGCCTCGGGTGTAGTCCTCATCCTTCAAGCTGTGGGCACAGCCTCTaGTCACCACCTCCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGIREDCHSLGCSPHPSSCGHSL*SPPPAL Trigger: GAGAGCTGGAGGTGGTGACAAGAGGCTGTGCCCACA...GCTTGAAGGATGAGGACTACACCCGAGGCTGTGGCAGTCTTCCCGGATGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCATCCGGGAAGACTGCCACAGCCTCGGGTGTAGTCCTCATCCTTCAAGCTTGTAGGATAGCGGCATaGCAGGCTTTGCTCCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WASGKTATASGVVLILQACRIAA*QALLPA Trigger: GGCCGGGAGCAAAGCCTGCAATGCCGCTATCCTACA...AGCTTGAAGGATGAGGACTACACCCGAGGCTGTGGCAGTCTTCCCGGATGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCTGGTTCATGGAAAAATGCCACGTGGGAGCCTaGGCACCAGGAAGCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPLLPAALVPILFWFMEKCHVGA*APGSRG Trigger: GCCACGGCTTCCTGGTGCCAAGGCTCCCACGTGGCA...TTTTTCCATGAACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS GCA 90 bp | CTGTGGGCACAGCCTCTTGTCACCACCTCCAGCTCTCTATCATCTTaGCATTCCCGAAGCACGGTAGTCCTGCAGAGGTCCTGGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LWAQPLVTTSSSLSS*HSRSTVVLQRSWPR Trigger: TCTGGGCCAGGACCTCTGCAGGACTACCGTGCTTCGGGAATGGCAAGATGATAGAGAGCTGGAGGTGGTGACAAGAGGCTGTGCCCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
||
| CDS-3UTR CAA 90 bp | AGCAACAATATTATCTCAACTAAGAGGCCCCTGCTGCCCGCAGCCCTTGTTCCACCGGGTCTGGGCCTGTaGCAGAGGTTTGTGGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SNNIISTKRPLLPAALVPPGLGL*QRFVAH Trigger: GTGCGCCACAAACCTCTGCAACAGGCCCAGACCCGG...TGGAACAAGGGCTGCGGGCAGCAGGGGCCTCTTAGTTGAGATAATATTGTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
||
| CDS-3UTR CAA 90 bp | ATTATCTCAACTAAGAGGCCCCTGCTGCCCGCAGCCCTTGTTCCAATTCTCTTCGCGGCATTGCAGGCTTaGCTCCCGGCCCCTCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: IISTKRPLLPAALVPILFAALQA*LPAPLT Trigger: TGTGAGAGGGGCCGGGAGCAAAGCCTGCAATGCCGC...GAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCTCTTAGTTGAGATAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTGCTGCTCTCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTTGTGGGCACAGCCTCTaGTCACCACCTCCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLSSSQAKCDSGETQPCGHSL*SPPPAL Trigger: GAGAGCTGGAGGTGGTGACAAGAGGCTGTGCCCACA...AGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGAGAGCAGCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
||
| CDS-3UTR CAA 90 bp | ATTGTTCCCCTCACAGCTGTAACACTGGAAGCCATTCGGTGGAAAGCTCTGAAGCCGGGTCTGGGCCTGTaGCAGAGGTTTGTGGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: IVPLTAVTLEAIRWKALKPGLGL*QRFVAH Trigger: GTGCGCCACAAACCTCTGCAACAGGCCCAGACCCGG...CTTCAGAGCTTTCCACCGAATGGCTTCCAGTGTTACAGCTGTGAGGGGAACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGCTGCTCTCATCTTCCCAAGCTAAATGTGACAGTGGGGAGACCCAACCTTGTAGGATAGCGGCATaGCAGGCTTTGCTCCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: SLLLSSSQAKCDSGETQPCRIAA*QALLPA Trigger: GGCCGGGAGCAAAGCCTGCAATGCCGCTATCCTACA...AGGTTGGGTCTCCCCACTGTCACATTTAGCTTGGGAAGATGAGAGCAGCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR CAA 90 bp | CTGGGCATCCGGGAAGACTGCCACAGCCTCGGGTGTAGTCCTCATCCTTCAAGCCTCTGCTCCCAGGACTaGAAGATCTCTACTAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LGIREDCHSLGCSPHPSSLCSQD*KISTRS Trigger: ACTCCTAGTAGAGATCTTCAAGTCCTGGGAGCAGAG...GCTTGAAGGATGAGGACTACACCCGAGGCTGTGGCAGTCTTCCCGGATGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS-3UTR CAA 90 bp | AAGGTCTGGTTGCTATGGAAACCTGCTGTGCCTGGGCATCCGGGAAGACTGCCATGTGTGTGGATTCAGTaGTCTCTTGCTTGCGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: KVWLLWKPAVPGHPGRLPCVWIQ*SLACAL Trigger: CAGAGCGCAAGCAAGAGACAACTGAATCCACACACA...TGGCAGTCTTCCCGGATGCCCAGGCACAGCAGGTTTCCATAGCAACCAGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS-3UTR CAA 90 bp | TGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATCCCAGGAGACAGAGACGTaGAGGTGGGTCGGGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: WFMEKLRSKEDNTRAHTSQETET*RWVGKE Trigger: CTCCTTCCCGACCCACCTCAACGTCTCTGTCTCCTG...GGATGTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS-3UTR CAA 90 bp | CTTCTGGTTCATGGAAAAACTGAGGTCCAAAGAAGACAACACGAGGGCACACACATTGGTCCCCGGCAGTaGATGAGAGACGCCTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: LLVHGKTEVQRRQHEGTHIGPRQ*MRDASS Trigger: CGAAGAGGCGTCTCTCATCAACTGCCGGGGACCAAT...GTGTGTGCCCTCGTGTTGTCTTCTTTGGACCTCAGTTTTTCCATGAACCAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS CAA 90 bp | GCTGTGGGCACAGCCTCTTGTCACCACCTCCAGCTCTCTATCATCTaGCCATTCCCGAAGCACGGTAGTCCTGCAGAGGTCCTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: AVGTASCHHLQLSII*PFPKHGSPAEVLAQ Trigger: CTGGGCCAGGACCTCTGCAGGACTACCGTGCTTCGGGAATGGCAAGATGATAGAGAGCTGGAGGTGGTGACAAGAGGCTGTGCCCACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS CAA 90 bp | CACCACTTCAATACAGTGCTCTGTAGGATAGCGGCATTGCAGGCTTaGCTCCCGGCCCCTCTCACAGCTCTGGTCCAAAGAGGTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: HHFNTVLCRIAALQA*LPAPLTALVQRGAG Trigger: TCCTGCACCTCTTTGGACCAGAGCTGTGAGAGGGGCCGGGAGCAAAGCCTGCAATGCCGCTATCCTACAGAGCACTGTATTGAAGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS CAA 90 bp | CTGGAGGGTCACCACTTCAATACAGTGCTCTGTAGGATAGCGGCATaGCAGGCTTTGCTCCCGGCCCCTCTCACAGCTCTGGTCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LEGHHFNTVLCRIAA*QALLPAPLTALVQR Trigger: TCTTTGGACCAGAGCTGTGAGAGGGGCCGGGAGCAAAGCCTGCAATGCCGCTATCCTACAGAGCACTGTATTGAAGTGGTGACCCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS CAA 90 bp | ATGATCCTCCCTTCCCCTGTACACGTCACGTGGATTTTCAGGATCTaGCCATTCCCGAAGCACGGTAGTCCTGCAGAGGTCCTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: MILPSPVHVTWIFRI*PFPKHGSPAEVLAQ Trigger: CTGGGCCAGGACCTCTGCAGGACTACCGTGCTTCGGGAATGGCAAGATCCTGAAAATCCACGTGACGTGTACAGGGGAAGGGAGGATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206935.2 |
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| CDS GCA 72 bp | CAGCCTCTTGTCACCACCTCCAGCTCTCTATCATCTTaGCATTCCCGAAGCACGGTAGTCCTGCAGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QPLVTTSSSLSS*HSRSTVVLQRS Trigger: GGACCTCTGCAGGACTACCGTGCTTCGGGAATGGCAAGATGATAGAGAGCTGGAGGTGGTGACAAGAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS CAA 72 bp | CACCACTTCAATACAGTGCTCTGTAGGATAGCGGCATaGCAGGCTTTGCTCCCGGCCCCTCTCACAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HHFNTVLCRIAA*QALLPAPLTAL Trigger: CAGAGCTGTGAGAGGGGCCGGGAGCAAAGCCTGCAATGCCGCTATCCTACAGAGCACTGTATTGAAGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS CAA 72 bp | ACAGCCTCTTGTCACCACCTCCAGCTCTCTATCATCTaGCCATTCCCGAAGCACGGTAGTCCTGCAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: TASCHHLQLSII*PFPKHGSPAEV Trigger: GACCTCTGCAGGACTACCGTGCTTCGGGAATGGCAAGATGATAGAGAGCTGGAGGTGGTGACAAGAGGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS CAA 72 bp | AATACAGTGCTCTGTAGGATAGCGGCATTGCAGGCTTaGCTCCCGGCCCCTCTCACAGCTCTGGTCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: NTVLCRIAALQA*LPAPLTALVQR Trigger: TCTTTGGACCAGAGCTGTGAGAGGGGCCGGGAGCAAAGCCTGCAATGCCGCTATCCTACAGAGCACTGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002284.11 ENSMUST00000206514.2 |
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| CDS GCA 72 bp | CTCGGGTGTAGTCCTCATCCTTCAAGCTCCTTTCTGTaGTCTGGAGGGTCACCACTTCAATACAGTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LGCSPHPSSSFL*SGGSPLQYSAL Trigger: CAGAGCACTGTATTGAAGTGGTGACCCTCCAGAGCACAGAAAGGAGCTTGAAGGATGAGGACTACACCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002284.11 |
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| CDS GCA 72 bp | CTAGGAGTTGCCCAGCAGATGGGAGCTTACTTTCTGTaGTCTGGAGGGTCACCACTTCAATACAGTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LGVAQQMGAYFL*SGGSPLQYSAL Trigger: CAGAGCACTGTATTGAAGTGGTGACCCTCCAGAGCACAGAAAGTAAGCTCCCATCTGCTGGGCAACTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS CAA 72 bp | TTCAGTTGTCTCTTGCTTGCGCTCTGCTCCCAGGACTaGAAGATCTCTACTAGGAGTTGCCCAGCAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: FSCLLLALCSQD*KISTRSCPADG Trigger: CCCATCTGCTGGGCAACTCCTAGTAGAGATCTTCAAGTCCTGGGAGCAGAGCGCAAGCAAGAGACAACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS CAA 90 bp | GTGTGTGGATTCAGTTGTCTCTTGCTTGCGCTCTGCTCCCAGGACTaGAAGATCTCTACTAGGAGTTGCCCAGCAGATGGGAGCTTACTT | + |
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Preference number: 6 (lower is better) Translates to: VCGFSCLLLALCSQD*KISTRSCPADGSLL Trigger: AAGTAAGCTCCCATCTGCTGGGCAACTCCTAGTAGAGATCTTCAAGTCCTGGGAGCAGAGCGCAAGCAAGAGACAACTGAATCCACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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| CDS CCA 72 bp | AGTTGCCCAGCAGATGGGAGCTTACTTTCTGTGCTCTaGAGGGTCACCACTTCAATACAGTGCTCTGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SCPADGSLLSVL*RVTTSIQCSVG Trigger: TCCTACAGAGCACTGTATTGAAGTGGTGACCCTCCAGAGCACAGAAAGTAAGCTCCCATCTGCTGGGCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206514.2 |
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