Pregenerated sensors for PLAU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021822Ensembl transcript IDs: ENSMUST00000022368.4, ENSMUST00000224141.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGAAGGACAGCAGGCGCATTCCAGGCCAGGCAGGGCCGACCTTTaGTATCAGTGTTGGCCTTTCCTCGGTAAGAGTCACCATTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: SEGQQAHSRPGRADL*YQCWPFLGKSHHFH Trigger: ATGGAAATGGTGACTCTTACCGAGGAAAGGCCAACACTGATACCAAAGGTCGGCCCTGCCTGGCCTGGAATGCGCCTGCTGTCCTTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR GCA 90 bp | AAACCTTGGGGGCAGGCAGATGGTCTGTATGGACCTGGATGGCTGTaGACATTGGCCCGTGCTGGTACGTATCTTCAGCAAGGCAATATC | + |
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Preference number: 1 (lower is better) Translates to: KPWGQADGLYGPGWL*TLARAGTYLQQGNI Trigger: GATATTGCCTTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATCTGCCTGCCCCCAAGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CCA 90 bp | AGTGCTCCCCCTGGAATTTCCTTGGGCAGCTGCATCGGCGAATTCTaGAGAAGTACTTGTAGGACACGCATACACCTCCGTTCTGACAGC | + |
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Preference number: 1 (lower is better) Translates to: SAPPGISLGSCIGEF*RSTCRTRIHLRSDS Trigger: GCTGTCAGAACGGAGGTGTATGCGTGTCCTACAAGTACTTCTCCAGAATTCGCCGATGCAGCTGCCCAAGGAAATTCCAGGGGGAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CCA 90 bp | CAGGCGCATTCCAGGCCAGGCAGGGCCGACCTTTGGTATCAGTGTTaGCCTTTCCTCGGTAAGAGTCACCATTTCCATGATAGCAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: QAHSRPGRADLWYQC*PFLGKSHHFHDSRF Trigger: AAACCTGCTATCATGGAAATGGTGACTCTTACCGAGGAAAGGCCAACACTGATACCAAAGGTCGGCCCTGCCTGGCCTGGAATGCGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CCA 90 bp | GGGGGCAGGCAGATGGTCTGTATGGACCTGGATGGCTGTGCACATTaGCCCGTGCTGGTACGTATCTTCAGCAAGGCAATATCATTATGG | + |
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Preference number: 1 (lower is better) Translates to: GGRQMVCMDLDGCAH*PVLVRIFSKAISLW Trigger: CCATAATGATATTGCCTTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATCTGCCTGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR GCA 90 bp | TTTAAAGGAGGGAGGACTTCCTCCCTTGTTCTTCTGGTAGATGGCTaGGAACCAGGGCTGGTTCTCCACCTCAGTGAATTCTCCCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: FKGGRTSSLVLLVDG*EPGLVLHLSEFSPN Trigger: GTTGGGGGAGAATTCACTGAGGTGGAGAACCAGCCCTGGTTCGCAGCCATCTACCAGAAGAACAAGGGAGGAAGTCCTCCCTCCTTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR GCA 90 bp | GTAGACAACGTAGTTTTCCTTCTTTGGGAGTTGAATGAAGCAGTGTaGGGCACTGGCCACCCAGCAAGGACTGATGAGACTCCCACCACA | + |
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Preference number: 1 (lower is better) Translates to: VDNVVFLLWELNEAV*GTGHPARTDETPTT Trigger: TGTGGTGGGAGTCTCATCAGTCCTTGCTGGGTGGCCAGTGCCGCACACTGCTTCATTCAACTCCCAAAGAAGGAAAACTACGTTGTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR GCA 90 bp | GGCAGATGGTCTGTATGGACCTGGATGGCTGTGCACATTGGCCCGTaGTGGTACGTATCTTCAGCAAGGCAATATCATTATGGTAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: GRWSVWTWMAVHIGP*WYVSSARQYHYGRP Trigger: TGGCCTACCATAATGATATTGCCTTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CCA 90 bp | AGATGGTCTGTATGGACCTGGATGGCTGTGCACATTGGCCCGTGCTaGTACGTATCTTCAGCAAGGCAATATCATTATGGTAGGCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: RWSVWTWMAVHIGPC*YVSSARQYHYGRPG Trigger: GCCTGGCCTACCATAATGATATTGCCTTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CCA 90 bp | TTAAAGCGGGGCCTTAGAGCCTTCTGGCCACACTGGAAGCCTTGTTaGTCTACAGACGAAGAAGGCTTTTTGCTAAGAGAGCAGTCATGC | + |
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Preference number: 1 (lower is better) Translates to: LKRGLRAFWPHWKPC*STDEEGFLLREQSC Trigger: GCATGACTGCTCTCTTAGCAAAAAGCCTTCTTCGTCTGTAGACCAACAAGGCTTCCAGTGTGGCCAGAAGGCTCTAAGGCCCCGCTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR TCA 90 bp | GGCCTTTCCTCGGTAAGAGTCACCATTTCCATGATAGCAGGTTTTTaGTGCATCTATCTCACAGTGCTCCCCCTGGAATTTCCTTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: GLSSVRVTISMIAGF*CIYLTVLPLEFPWA Trigger: TGCCCAAGGAAATTCCAGGGGGAGCACTGTGAGATAGATGCATCAAAAACCTGCTATCATGGAAATGGTGACTCTTACCGAGGAAAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR TCA 90 bp | CATTATGGTAGGCCAGGCTGTCTTCCCTGTAGTATTCGTGCAAGATaGGCTGCTCCACCTCAAACTTCATCTCTCCAGGATTATAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: HYGRPGCLPCSIRAR*AAPPQTSSLQDYRS Trigger: GCTCCTATAATCCTGGAGAGATGAAGTTTGAGGTGGAGCAGCTCATCTTGCACGAATACTACAGGGAAGACAGCCTGGCCTACCATAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR TCA 90 bp | ATAGTCACTTTCAGACTCTTTTCCAAAGCCAGTGATCTCACAGTCTaGACCAAACGGAGCATCAGTAAACCTTGGGGGCAGGCAGATGGT | + |
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Preference number: 1 (lower is better) Translates to: IVTFRLFSKASDLTV*TKRSISKPWGQADG Trigger: ACCATCTGCCTGCCCCCAAGGTTTACTGATGCTCCGTTTGGTTCAGACTGTGAGATCACTGGCTTTGGAAAAGAGTCTGAAAGTGACTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CCA 90 bp | CTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTACCGTTCTCATATTaGACAAGCACCCTCACAATACCTCAGCTGTTGCACTTCCTAATT | + |
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Preference number: 1 (lower is better) Translates to: LKPLVSLLLKLPFSY*TSTLTIPQLLHFLI Trigger: AATTAGGAAGTGCAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGAGAACGGTAGCTTGAGGAGTAGAGACACTAACGGCTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR CAA 90 bp | GGTCTGGATGGCCAGCACCCAGGCCTGTGTCTGAGGGTAATGCTATaGGCGCTCACCCTGGTGGGCAGCACAGCAGAGGATCAATGCAAA | + |
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Preference number: 2 (lower is better) Translates to: GLDGQHPGLCLRVML*ALTLVGSTAEDQCK Trigger: TTTGCATTGATCCTCTGCTGTGCTGCCCACCAGGGTGAGCGCCAATAGCATTACCCTCAGACACAGGCCTGGGTGCTGGCCATCCAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR-3UTR CCA 90 bp | CATGGGATGCTAGAGCTGTTCCCTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTTCGGGAGGGTCTGGATaGCCAGCACCCAGGCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: HGMLELFPQAVSVSTPQASGGSG*PAPRPV Trigger: CACAGGCCTGGGTGCTGGCCATCCAGACCCTCCCGA...AGCTTGAGGAGTAGAGACACTAACGGCTTGAGGGAACAGCTCTAGCATCCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR CAA 90 bp | GGGCGGCCTTCGATGTTACAGATAAGCGGTCCTCCAGAATCGCCCTaGCAGGAATCTGTTTTCCACTCTGGGTCCGCAGCACACAGCATT | + |
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Preference number: 2 (lower is better) Translates to: GRPSMLQISGPPESP*QESVFHSGSAAHSI Trigger: AATGCTGTGTGCTGCGGACCCAGAGTGGAAAACAGATTCCTGCAAGGGCGATTCTGGAGGACCGCTTATCTGTAACATCGAAGGCCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGGAGTTGAATGAAGCAGTGTGCGGCACTGGCCACCCAGCAAGGACTGATGCTGCGAACCAGGGCTaGTTCTCCACCTCAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: LWELNEAVCGTGHPARTDAANQG*FSTSVN Trigger: ATTCACTGAGGTGGAGAACCAGCCCTGGTTCGCAGC...ATCAGTCCTTGCTGGGTGGCCAGTGCCGCACACTGCTTCATTCAACTCCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CAA 90 bp | TGGGGGCAGGCAGATGGTCTGTATGGACCTGGATGGCTGTGCACATaGGCCCGTGCTGGTACGTATCTTCAGCAAGGCAATATCATTATG | + |
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Preference number: 2 (lower is better) Translates to: WGQADGLYGPGWLCT*ARAGTYLQQGNIIM Trigger: CATAATGATATTGCCTTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATCTGCCTGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGCTCCACCTCAAACTTCATCTCTCCAGGATTATAGGAGCTCTCCTTCGACACCAGGGTCGCTTCTaGTTGTCAGGGTTCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ELLHLKLHLSRIIGALLRHQGRF*LSGFLQ Trigger: CTGCAGGAACCCTGACAACCAGAAGCGACCCTGGTG...TCGAAGGAGAGCTCCTATAATCCTGGAGAGATGAAGTTTGAGGTGGAGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTTGGGAGTTGAATGAAGCAGTGTGCGGCACTGGCCACCCAGCAAGGACTCATACACCTCCGTTCTaGCAGCCACAGTTTGATTCA | + |
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Preference number: 2 (lower is better) Translates to: LLWELNEAVCGTGHPARTHTPPF*QPQFDS Trigger: TGAATCAAACTGTGGCTGTCAGAACGGAGGTGTATG...AGTCCTTGCTGGGTGGCCAGTGCCGCACACTGCTTCATTCAACTCCCAAAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGTCTGTATGGACCTGGATGGCTGTGCACATTGGCCCGTGCTGGTACGTATGCATCTATCTCACAGTaGTCCCCCTGGAATTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: DGLYGPGWLCTLARAGTYASISQ*SPWNFL Trigger: AAGGAAATTCCAGGGGGAGCACTGTGAGATAGATGC...ATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGTCTGTATGGACCTGGATGGCTGTGCACATTGGCCCGTGCTGGTACGTATTGCACCATGCATTCTTaGACAAACTGCCTTAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: DGLYGPGWLCTLARAGTYCTMHS*TNCLRP Trigger: TGGCCTAAGGCAGTTTGTCCAAGAATGCATGGTGCA...ATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR TCA 90 bp | AATCGCCCTTGCAGGAATCTGTTTTCCACTCTGGGTCCGCAGCACACAGCATTTCAGCATGGGAACAAGTaGCCCATCTGTTTCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: NRPCRNLFSTLGPQHTAFQHGNK*PICFFP Trigger: AGGGAAGAAACAGATGGGTCACTTGTTCCCATGCTG...AAATGCTGTGTGCTGCGGACCCAGAGTGGAAAACAGATTCCTGCAAGGGCGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGATAAGCGGTCCTCCAGAATCGCCCTTGCAGGAATCTGTTTTCCACTCTGGCCTTAGAGCCTTCTaGCCACACTGGAAGCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LQISGPPESPLQESVFHSGLRAF*PHWKPC Trigger: ACAAGGCTTCCAGTGTGGCCAGAAGGCTCTAAGGCC...AGAGTGGAAAACAGATTCCTGCAAGGGCGATTCTGGAGGACCGCTTATCTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR CCA 90 bp | CTCGGCCCCAGCTCACAATCCCACTCAGAGTTGGGCGGCCTTCGATGTTACAGAGTAGTTTTCCTTCTTTaGGAGTTGAATGAAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LGPSSQSHSELGGLRCYRVVFLL*ELNEAV Trigger: CACTGCTTCATTCAACTCCCAAAGAAGGAAAACTAC...TCTGTAACATCGAAGGCCGCCCAACTCTGAGTGGGATTGTGAGCTGGGGCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGATAAGCGGTCCTCCAGAATCGCCCTTGCAGGAATCTGTTTTCCACTCTTGTTCTTCTGGTAGATaGCTGCGAACCAGGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LQISGPPESPLQESVFHSCSSGR*LRTRAG Trigger: ACCAGCCCTGGTTCGCAGCCATCTACCAGAAGAACA...AGAGTGGAAAACAGATTCCTGCAAGGGCGATTCTGGAGGACCGCTTATCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CAA 90 bp | GCAAAACCTGTCTTTTCAGCTTCTTCCCTCCATTTGACGACTCTGTaGCAGAGAGGACGGTCAGCATGGGAACAAGTGACCCATCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: AKPVFSASSLHLTTL*QRGRSAWEQVTHLF Trigger: AAACAGATGGGTCACTTGTTCCCATGCTGACCGTCCTCTCTGCAACAGAGTCGTCAAATGGAGGGAAGAAGCTGAAAAGACAGGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR CAA 90 bp | TGGCCACACTGGAAGCCTTGTTGGTCTACAGACGAAGAAGGCTTTTaGCTAAGAGAGCAGTCATGCACCATGCATTCTTGGACAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: WPHWKPCWSTDEEGF*LREQSCTMHSWTNC Trigger: GCAGTTTGTCCAAGAATGCATGGTGCATGACTGCTCTCTTAGCAAAAAGCCTTCTTCGTCTGTAGACCAACAAGGCTTCCAGTGTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCTACCTGAGGGCCATCAGAAGGCCAGACCTTTCTCTTCTCCAATGTGGGATGATAGCAGGTTTTTaGTGCATCTATCTCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSYLRAIRRPDLSLLQCGMIAGF*CIYLTV Trigger: CACTGTGAGATAGATGCATCAAAAACCTGCTATCAT...CCCACATTGGAGAAGAGAAAGGTCTGGCCTTCTGATGGCCCTCAGGTAGCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CAA 90 bp | CCTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTACCGTTCTCATATaGGACAAGCACCCTCACAATACCTCAGCTGTTGCACTTCCTAAT | + |
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Preference number: 2 (lower is better) Translates to: PQAVSVSTPQATVLI*DKHPHNTSAVALPN Trigger: ATTAGGAAGTGCAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGAGAACGGTAGCTTGAGGAGTAGAGACACTAACGGCTTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCTTTTTGCTAAGAGAGCAGTCATGCACCATGCATTCTTGGACAAACTGCCTCTTTGGTATCAGTGTTaGCCTTTCCTCGGTAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RLFAKRAVMHHAFLDKLPLWYQC*PFLGKS Trigger: ACTCTTACCGAGGAAAGGCCAACACTGATACCAAAG...AGGCAGTTTGTCCAAGAATGCATGGTGCATGACTGCTCTCTTAGCAAAAAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTTATACTCACAGCCTGTGCAGAGTGAACAAACATACACACAAATATAACCAGCATGGGAACAAGTaGCCCATCTGTTTCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: QAYTHSLCRVNKHTHKYNQHGNK*PICFFP Trigger: AGGGAAGAAACAGATGGGTCACTTGTTCCCATGCTG...GTTATATTTGTGTGTATGTTTGTTCACTCTGCACAGGCTGTGAGTATAAGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR CAA 90 bp | CTACCGTTCTCATATTGGACAAGCACCCTCACAATACCTCAGCTGTaGCACTTCCTAATTGGGAAATCATTTATTTCCCAACAGCAGATC | + |
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Preference number: 2 (lower is better) Translates to: LPFSYWTSTLTIPQL*HFLIGKSFISQQQI Trigger: GATCTGCTGTTGGGAAATAAATGATTTCCCAATTAGGAAGTGCAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGAGAACGGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCTGGAGTTAGGGAAATACCTAGACTTGCAGTTAGATACAGAAATACACCAGACAGCCTGTGCAGAGTaGACAAACATACACACAAAT | + |
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Preference number: 2 (lower is better) Translates to: SLELGKYLDLQLDTEIHQTACAE*TNIHTN Trigger: ATTTGTGTGTATGTTTGTTCACTCTGCACAGGCTGT...CTGGTGTATTTCTGTATCTAACTGCAAGTCTAGGTATTTCCCTAACTCCAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR CCA 72 bp | AGGACCAACTTTCCATCCTGGTCGGGAGGGTCTGGATaGCCAGCACCCAGGCCTGTGTCTGAGGGTAATGCT | + |
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Preference number: 3 (lower is better) Translates to: RTNFPSWSGGSG*PAPRPVSEGNA Trigger: AGCATTACCCTCAGACACAGGCCTGGGTGCTGGCCATCCAGACCCTCCCGACCAGGATGGAAAGTTGGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR CCA 72 bp | CAGCAGGCGCATTCCAGGCCAGGCAGGGCCGACCTTTaGTATCAGTGTTGGCCTTTCCTCGGTAAGAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: QQAHSRPGRADL*YQCWPFLGKSH Trigger: GTGACTCTTACCGAGGAAAGGCCAACACTGATACCAAAGGTCGGCCCTGCCTGGCCTGGAATGCGCCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR GCA 72 bp | GGGCAGGCAGATGGTCTGTATGGACCTGGATGGCTGTaGACATTGGCCCGTGCTGGTACGTATCTTCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GQADGLYGPGWL*TLARAGTYLQQ Trigger: TTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATCTGCCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR-3UTR CAA 90 bp | GATGGTCTGTATGGACCTGGATGGCTGTGCACATTGGCCCGTGCTGGTACGTATAGGCAGGGCCGACCTTaGGTATCAGTGTTGGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: DGLYGPGWLCTLARAGTYRQGRP*VSVLAF Trigger: AAAGGCCAACACTGATACCAAAGGTCGGCCCTGCCT...ATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR TCA 72 bp | CTCTGTTGCAGAGAGGACGGTCAGCATGGGAACAAGTaGCCCATCTGTTTCTTCCCTCAGCTACCTGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: LCCREDGQHGNK*PICFFPQLPEG Trigger: GCCCTCAGGTAGCTGAGGGAAGAAACAGATGGGTCACTTGTTCCCATGCTGACCGTCCTCTCTGCAACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR GCA 72 bp | GGGAGGACTTCCTCCCTTGTTCTTCTGGTAGATGGCTaGGAACCAGGGCTGGTTCTCCACCTCAGTGAATTC | + |
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Preference number: 3 (lower is better) Translates to: GRTSSLVLLVDG*EPGLVLHLSEF Trigger: GAATTCACTGAGGTGGAGAACCAGCCCTGGTTCGCAGCCATCTACCAGAAGAACAAGGGAGGAAGTCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CCA 72 bp | ACGCCCGGGAATGATACATTCACGTGGAGCATCACATaGAAGACCAAATGGCCCCGCATCACAGTCTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: TPGNDTFTWSIT*KTKWPRITVWS Trigger: ACTCCAGACTGTGATGCGGGGCCATTTGGTCTTCCATGTGATGCTCCACGTGAATGTATCATTCCCGGGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| 3UTR CCA 72 bp | TCCAGGCCAGGCAGGGCCGACCTTTGGTATCAGTGTTaGCCTTTCCTCGGTAAGAGTCACCATTTCCATGAT | + |
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Preference number: 3 (lower is better) Translates to: SRPGRADLWYQC*PFLGKSHHFHD Trigger: ATCATGGAAATGGTGACTCTTACCGAGGAAAGGCCAACACTGATACCAAAGGTCGGCCCTGCCTGGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR TCA 72 bp | GGTAGACAACGTAGTTTTCCTTCTTTGGGAGTTGAATaGAGCAGTGTGCGGCACTGGCCACCCAGCAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: GRQRSFPSLGVE*SSVRHWPPSKD Trigger: GTCCTTGCTGGGTGGCCAGTGCCGCACACTGCTTCATTCAACTCCCAAAGAAGGAAAACTACGTTGTCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR TCA 72 bp | GAACAAGTGACCCATCTGTTTCTTCCCTCAGCTACCTaGGGGCCATCAGAAGGCCAGACCTTTCTCTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: EQVTHLFLPSAT*GPSEGQTFLFS Trigger: GGAGAAGAGAAAGGTCTGGCCTTCTGATGGCCCTCAGGTAGCTGAGGGAAGAAACAGATGGGTCACTTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR GCA 72 bp | TCTCACAGTGCTCCCCCTGGAATTTCCTTGGGCAGCTaGATCGGCGAATTCTGGAGAAGTACTTGTAGGACA | + |
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Preference number: 3 (lower is better) Translates to: SHSAPPGISLGS*IGEFWRSTCRT Trigger: TGTCCTACAAGTACTTCTCCAGAATTCGCCGATGCAGCTGCCCAAGGAAATTCCAGGGGGAGCACTGTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CCA 72 bp | CCTGGAATTTCCTTGGGCAGCTGCATCGGCGAATTCTaGAGAAGTACTTGTAGGACACGCATACACCTCCGT | + |
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Preference number: 3 (lower is better) Translates to: PGISLGSCIGEF*RSTCRTRIHLR Trigger: ACGGAGGTGTATGCGTGTCCTACAAGTACTTCTCCAGAATTCGCCGATGCAGCTGCCCAAGGAAATTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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| 3UTR CCA 72 bp | CAGATGGTCTGTATGGACCTGGATGGCTGTGCACATTaGCCCGTGCTGGTACGTATCTTCAGCAAGGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: QMVCMDLDGCAH*PVLVRIFSKAI Trigger: TATTGCCTTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTTCCAAAGCCAGTGATCTCACAGTCTGAACCAAACGGAGCATCAGTAAACCCCCCTGGAATTTCCTaGGGCAGCTGCATCGGCGAA | + |
|
Preference number: 3 (lower is better) Translates to: SFPKPVISQSEPNGASVNPPGIS*GSCIGE Trigger: TTCGCCGATGCAGCTGCCCAAGGAAATTCCAGGGGG...GTTTACTGATGCTCCGTTTGGTTCAGACTGTGAGATCACTGGCTTTGGAAAAGA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| 3UTR TCA 72 bp | AGGCCAGGCTGTCTTCCCTGTAGTATTCGTGCAAGATaGGCTGCTCCACCTCAAACTTCATCTCTCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RPGCLPCSIRAR*AAPPQTSSLQD Trigger: ATCCTGGAGAGATGAAGTTTGAGGTGGAGCAGCTCATCTTGCACGAATACTACAGGGAAGACAGCCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| 3UTR CCA 72 bp | CATTTGACGACTCTGTTGCAGAGAGGACGGTCAGCATaGGAACAAGTGACCCATCTGTTTCTTCCCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLTTLLQRGRSA*EQVTHLFLPSA Trigger: AGCTGAGGGAAGAAACAGATGGGTCACTTGTTCCCATGCTGACCGTCCTCTCTGCAACAGAGTCGTCAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| 3UTR CCA 72 bp | TGCATCTATCTCACAGTGCTCCCCCTGGAATTTCCTTaGGCAGCTGCATCGGCGAATTCTGGAGAAGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: CIYLTVLPLEFP*AAASANSGEVL Trigger: AAGTACTTCTCCAGAATTCGCCGATGCAGCTGCCCAAGGAAATTCCAGGGGGAGCACTGTGAGATAGATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| 3UTR CCA 72 bp | GTATGGACCTGGATGGCTGTGCACATTGGCCCGTGCTaGTACGTATCTTCAGCAAGGCAATATCATTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: VWTWMAVHIGPC*YVSSARQYHYG Trigger: ACCATAATGATATTGCCTTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| 3UTR GCA 72 bp | TCTGTATGGACCTGGATGGCTGTGCACATTGGCCCGTaGTGGTACGTATCTTCAGCAAGGCAATATCATTAT | + |
|
Preference number: 3 (lower is better) Translates to: SVWTWMAVHIGP*WYVSSARQYHY Trigger: ATAATGATATTGCCTTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| 3UTR TCA 72 bp | GATAACTGGCCAAGAAGTGGACATCTATATAAAAAGTaGAACCGACATTTAGTGCTAGTCACGGGTCACGCC | + |
|
Preference number: 3 (lower is better) Translates to: DNWPRSGHLYKK*NRHLVLVTGHA Trigger: GGCGTGACCCGTGACTAGCACTAAATGTCGGTTTCACTTTTTATATAGATGTCCACTTCTTGGCCAGTTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| 3UTR TCA 72 bp | TCGGTAAGAGTCACCATTTCCATGATAGCAGGTTTTTaGTGCATCTATCTCACAGTGCTCCCCCTGGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: SVRVTISMIAGF*CIYLTVLPLEF Trigger: AAATTCCAGGGGGAGCACTGTGAGATAGATGCATCAAAAACCTGCTATCATGGAAATGGTGACTCTTACCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| 3UTR CCA 72 bp | TCCAGAATCGCCCTTGCAGGAATCTGTTTTCCACTCTaGGTCCGCAGCACACAGCATTTTATAATTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SRIALAGICFPL*VRSTQHFIINF Trigger: GAAATTAATTATAAAATGCTGTGTGCTGCGGACCCAGAGTGGAAAACAGATTCCTGCAAGGGCGATTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTTATACTCACAGCCTGTGCAGAGTGAACAAACATACACACAAATATAACACAATACCTCAGCTGTaGCACTTCCTAATTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QAYTHSLCRVNKHTHKYNTIPQL*HFLIGK Trigger: TTTCCCAATTAGGAAGTGCAACAGCTGAGGTATTGT...GTTATATTTGTGTGTATGTTTGTTCACTCTGCACAGGCTGTGAGTATAAGCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| 3UTR CCA 72 bp | AGAAACAAGCTTTACGACGGACATTTTCAGGTTCTTTaGATAGAGATAGTCACTTTCAGACTCTTTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RNKLYDGHFQVL*IEIVTFRLFSK Trigger: TTTGGAAAAGAGTCTGAAAGTGACTATCTCTATCCAAAGAACCTGAAAATGTCCGTCGTAAAGCTTGTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| CDS-3UTR GCA 90 bp | TATAGCATCCTGAGTCAGGACCAACTTTCCATCCTGGTCGGGAGGGTCTGGATGGGACCTGGATGGCTGTaGACATTGGCCCGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSILSQDQLSILVGRVWMGPGWL*TLARAG Trigger: ACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCC...CATCCAGACCCTCCCGACCAGGATGGAAAGTTGGTCCTGACTCAGGATGCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGCCTGTGTCTGAGGGTAATGCTATTGGCGCTCACCCTGGTGGGCAGCCTTTGGTATCAGTGTTaGCCTTTCCTCGGTAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HPGLCLRVMLLALTLVGSLWYQC*PFLGKS Trigger: ACTCTTACCGAGGAAAGGCCAACACTGATACCAAAG...GCTGCCCACCAGGGTGAGCGCCAATAGCATTACCCTCAGACACAGGCCTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| 3UTR CAA 72 bp | GCAGATGGTCTGTATGGACCTGGATGGCTGTGCACATaGGCCCGTGCTGGTACGTATCTTCAGCAAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ADGLYGPGWLCT*ARAGTYLQQGN Trigger: ATTGCCTTGCTGAAGATACGTACCAGCACGGGCCAATGTGCACAGCCATCCAGGTCCATACAGACCATCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| 3UTR CAA 72 bp | TCGATGTTACAGATAAGCGGTCCTCCAGAATCGCCCTaGCAGGAATCTGTTTTCCACTCTGGGTCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMLQISGPPESP*QESVFHSGSAA Trigger: TGCTGCGGACCCAGAGTGGAAAACAGATTCCTGCAAGGGCGATTCTGGAGGACCGCTTATCTGTAACATCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAGCTACCGTTCTCATATTGGACAAGCACCCTCACAATACCTCAGCTGTTGCCAGTCCAGGAAGTGTaGGACCCTCGTGTAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LKLPFSYWTSTLTIPQLLPVQEV*DPRVDT Trigger: GGTGTCTACACGAGGGTCTCACACTTCCTGGACTGG...CAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGAGAACGGTAGCTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | ACTCTGTTGCAGAGAGGACGGTCAGCATGGGAACAAGTGACCCATCTGTTTCTTGGCCTTAGAGCCTTCTaGCCACACTGGAAGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLQRGRSAWEQVTHLFLGLRAF*PHWKPC Trigger: ACAAGGCTTCCAGTGTGGCCAGAAGGCTCTAAGGCC...AAGAAACAGATGGGTCACTTGTTCCCATGCTGACCGTCCTCTCTGCAACAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR GCA 90 bp | CTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTACCGTTCTCATATTGGACAAGCTTGAATGAAGCAGTGTaGGGCACTGGCCACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKPLVSLLLKLPFSYWTSLNEAV*GTGHPA Trigger: TGCTGGGTGGCCAGTGCCGCACACTGCTTCATTCAA...GCTTGTCCAATATGAGAACGGTAGCTTGAGGAGTAGAGACACTAACGGCTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTGGTCTATAGCATCCTGAGTCAGGACCAACTTTCCATCCTGGTCGGGCTCCAGAATCGCCCTTaGAGGAATCTGTTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QLLVYSILSQDQLSILVGLQNRP*RNLFST Trigger: AGTGGAAAACAGATTCCTGCAAGGGCGATTCTGGAG...CCCGACCAGGATGGAAAGTTGGTCCTGACTCAGGATGCTATAGACCAGGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR GCA 90 bp | CTCAAGCTACCGTTCTCATATTGGACAAGCACCCTCACAATACCTCAGCTGTTGGGGCTTGTTTTTCTCTaGACATCCTCGGCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKLPFSYWTSTLTIPQLLGLVFL*TSSAPA Trigger: AGCTGGGGCCGAGGATGTGCAGAGAAAAACAAGCCC...CAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGAGAACGGTAGCTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTACCGTTCTCATATTGGACAAGCTCACAGTGCTCCCCCTaGAATTTCCTTGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKPLVSLLLKLPFSYWTSSQCSP*NFLGQL Trigger: CAGCTGCCCAAGGAAATTCCAGGGGGAGCACTGTGA...GCTTGTCCAATATGAGAACGGTAGCTTGAGGAGTAGAGACACTAACGGCTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | AAAACCTGTCTTTTCAGCTTCTTCCCTCCATTTGACGACTCTGTTGCAGAGAGGCACCAGGGTCGCTTCTaGTTGTCAGGGTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTCLFSFFPPFDDSVAERHQGRF*LSGFLQ Trigger: CTGCAGGAACCCTGACAACCAGAAGCGACCCTGGTG...CCTCTCTGCAACAGAGTCGTCAAATGGAGGGAAGAAGCTGAAAAGACAGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | AGCTACCGTTCTCATATTGGACAAGCACCCTCACAATACCTCAGCTGTTGCACTTTGGGGGCAGGCAGATaGTCTGTATGGACCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SYRSHIGQAPSQYLSCCTLGAGR*SVWTWM Trigger: CATCCAGGTCCATACAGACCATCTGCCTGCCCCCAA...AGTGCAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGAGAACGGTAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR TCA 90 bp | CATGGGATGCTAGAGCTGTTCCCTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTCATACACCTCCGTTCTaGCAGCCACAGTTTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGMLELFPQAVSVSTPQAHTPPF*QPQFDS Trigger: TGAATCAAACTGTGGCTGTCAGAACGGAGGTGTATG...AGCTTGAGGAGTAGAGACACTAACGGCTTGAGGGAACAGCTCTAGCATCCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR GCA 90 bp | CATGGGATGCTAGAGCTGTTCCCTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTGCATCTATCTCACAGTaGTCCCCCTGGAATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGMLELFPQAVSVSTPQAASISQ*SPWNFL Trigger: AAGGAAATTCCAGGGGGAGCACTGTGAGATAGATGC...AGCTTGAGGAGTAGAGACACTAACGGCTTGAGGGAACAGCTCTAGCATCCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | GAAACAGCTCTCCTCCTACACTTGCCCAGGAGATGTTTTCTAAACTGCAGATGGGCCTTCTGGCCACACTaGAAGCCTTGTTGGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: ETALLLHLPRRCFLNCRWAFWPH*KPCWST Trigger: TGTAGACCAACAAGGCTTCCAGTGTGGCCAGAAGGC...CCATCTGCAGTTTAGAAAACATCTCCTGGGCAAGTGTAGGAGGAGAGCTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | GAAACAGCTCTCCTCCTACACTTGCCCAGGAGATGTTTTCTAAACTGCAGATGGTGTTCTTCTGGTAGATaGCTGCGAACCAGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETALLLHLPRRCFLNCRWCSSGR*LRTRAG Trigger: ACCAGCCCTGGTTCGCAGCCATCTACCAGAAGAACA...CCATCTGCAGTTTAGAAAACATCTCCTGGGCAAGTGTAGGAGGAGAGCTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | GACAAGCACCCTCACAATACCTCAGCTGTTGCACTTCCTAATTGGGAAATCATTGCTGCGAACCAGGGCTaGTTCTCCACCTCAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DKHPHNTSAVALPNWEIIAANQG*FSTSVN Trigger: ATTCACTGAGGTGGAGAACCAGCCCTGGTTCGCAGC...AATGATTTCCCAATTAGGAAGTGCAACAGCTGAGGTATTGTGAGGGTGCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | GACAAGCACCCTCACAATACCTCAGCTGTTGCACTTCCTAATTGGGAAATCATTGGCAGATGGTCTGTATaGACCTGGATGGCTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DKHPHNTSAVALPNWEIIGRWSV*TWMAVH Trigger: GTGCACAGCCATCCAGGTCCATACAGACCATCTGCC...AATGATTTCCCAATTAGGAAGTGCAACAGCTGAGGTATTGTGAGGGTGCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | AAAACCTGTCTTTTCAGCTTCTTCCCTCCATTTGACGACTCTGTTGCAGAGAGGAGCATCAGTAAACCTTaGGGGCAGGCAGATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTCLFSFFPPFDDSVAERSISKP*GQADGL Trigger: CAGACCATCTGCCTGCCCCCAAGGTTTACTGATGCT...CCTCTCTGCAACAGAGTCGTCAAATGGAGGGAAGAAGCTGAAAAGACAGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | CAAGCTACCGTTCTCATATTGGACAAGCACCCTCACAATACCTCAGCTGTTGCAATCTGTTTTCCACTCTaGGTCCGCAGCACACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QATVLILDKHPHNTSAVAICFPL*VRSTQH Trigger: ATGCTGTGTGCTGCGGACCCAGAGTGGAAAACAGAT...TGCAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGAGAACGGTAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR GCA 90 bp | CTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTACCGTTCTCATATTGGACAAGCGGTTGTCAGGGTTCCTaGAGTAATTGTGTTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKPLVSLLLKLPFSYWTSGCQGS*SNCVSP Trigger: TGGGGAAACACAATTACTGCAGGAACCCTGACAACC...GCTTGTCCAATATGAGAACGGTAGCTTGAGGAGTAGAGACACTAACGGCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR GCA 90 bp | AGGGAAATACCTAGACTTGCAGTTAGATACAGAAATACACCAGCTTTTGCTCAGCTTCTGGTAGATGGCTaGGAACCAGGGCTGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: REIPRLAVRYRNTPAFAQLLVDG*EPGLVL Trigger: GAGAACCAGCCCTGGTTCGCAGCCATCTACCAGAAG...CTGAGCAAAAGCTGGTGTATTTCTGTATCTAACTGCAAGTCTAGGTATTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| 3UTR CAA 72 bp | GTTAGTGTCTCTACTCCTCAAGCTACCGTTCTCATATaGGACAAGCACCCTCACAATACCTCAGCTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVSTPQATVLI*DKHPHNTSAVA Trigger: TGCAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGAGAACGGTAGCTTGAGGAGTAGAGACACTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| 3UTR CAA 72 bp | TGGAAGCCTTGTTGGTCTACAGACGAAGAAGGCTTTTaGCTAAGAGAGCAGTCATGCACCATGCATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WKPCWSTDEEGF*LREQSCTMHSW Trigger: CCAAGAATGCATGGTGCATGACTGCTCTCTTAGCAAAAAGCCTTCTTCGTCTGTAGACCAACAAGGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| CDS-3UTR GCA 90 bp | GACAAGCACCCTCACAATACCTCAGCTGTTGCACTTCCTAATTGGGAAATCATTTCGTGCAAGATGAGCTaGTCCACCTCAAACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DKHPHNTSAVALPNWEIISCKMS*STSNFI Trigger: GATGAAGTTTGAGGTGGAGCAGCTCATCTTGCACGA...AATGATTTCCCAATTAGGAAGTGCAACAGCTGAGGTATTGTGAGGGTGCTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CCA 90 bp | AGCTACCGTTCTCATATTGGACAAGCACCCTCACAATACCTCAGCTGTTGCACTGTAGTTTTCCTTCTTTaGGAGTTGAATGAAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SYRSHIGQAPSQYLSCCTVVFLL*ELNEAV Trigger: CACTGCTTCATTCAACTCCCAAAGAAGGAAAACTAC...AGTGCAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGAGAACGGTAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR GCA 90 bp | CTGACCCAGGTAGACAACGTAGTTTTCCTTCTTTGGGAGTTGAATGAAGCAGTGGAGATGAAGGTGACATaGTTTCAGAGTTTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTQVDNVVFLLWELNEAVEMKVT*FQSFSP Trigger: TGGTGAAAAACTCTGAAAGCATGTCACCTTCATCTC...CACTGCTTCATTCAACTCCCAAAGAAGGAAAACTACGTTGTCTACCTGGGTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTGGAGTTAGGGAAATACCTAGACTTGCAGTTAGATACAGAAATACACCAGTGCACCATGCATTCTTaGACAAACTGCCTTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLELGKYLDLQLDTEIHQCTMHS*TNCLRP Trigger: TGGCCTAAGGCAGTTTGTCCAAGAATGCATGGTGCA...CTGGTGTATTTCTGTATCTAACTGCAAGTCTAGGTATTTCCCTAACTCCAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR TCA 90 bp | ATGTTTTCTAAACTGCAGATGGCTTTAGTCCATAAAAAGGCAACTCCTGGTCTACTTTTCCAAAGCCAGTaGTCTCACAGTCTGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: MFSKLQMALVHKKATPGLLFQSQ*SHSLNQ Trigger: TTGGTTCAGACTGTGAGATCACTGGCTTTGGAAAAG...TAGACCAGGAGTTGCCTTTTTATGGACTAAAGCCATCTGCAGTTTAGAAAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR TCA 90 bp | AGGGAAATACCTAGACTTGCAGTTAGATACAGAAATACACCAGCTTTTGCTCAGATGATAGCAGGTTTTTaGTGCATCTATCTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: REIPRLAVRYRNTPAFAQMIAGF*CIYLTV Trigger: CACTGTGAGATAGATGCATCAAAAACCTGCTATCAT...CTGAGCAAAAGCTGGTGTATTTCTGTATCTAACTGCAAGTCTAGGTATTTCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| 3UTR CAA 72 bp | TCATATTGGACAAGCACCCTCACAATACCTCAGCTGTaGCACTTCCTAATTGGGAAATCATTTATTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYWTSTLTIPQL*HFLIGKSFISQ Trigger: TTGGGAAATAAATGATTTCCCAATTAGGAAGTGCAACAGCTGAGGTATTGTGAGGGTGCTTGTCCAATATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CAA 90 bp | CATGGGATGCTAGAGCTGTTCCCTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTAGGCAGGGCCGACCTTaGGTATCAGTGTTGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HGMLELFPQAVSVSTPQARQGRP*VSVLAF Trigger: AAAGGCCAACACTGATACCAAAGGTCGGCCCTGCCT...AGCTTGAGGAGTAGAGACACTAACGGCTTGAGGGAACAGCTCTAGCATCCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CAA 90 bp | CATGGGATGCTAGAGCTGTTCCCTCAAGCCGTTAGTGTCTCTACTCCTCAAGCTCCTCCAGAATCGCCCTaGCAGGAATCTGTTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HGMLELFPQAVSVSTPQAPPESP*QESVFH Trigger: GTGGAAAACAGATTCCTGCAAGGGCGATTCTGGAGG...AGCTTGAGGAGTAGAGACACTAACGGCTTGAGGGAACAGCTCTAGCATCCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CAA 90 bp | GTCAGCATGGGAACAAGTGACCCATCTGTTTCTTCCCTCAGCTACCTGAGGGCCTTCTCCAATGTGGGATaGAATCCAGTCCAGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSMGTSDPSVSSLSYLRAFSNVG*NPVQEV Trigger: CACTTCCTGGACTGGATTCAATCCCACATTGGAGAA...GGCCCTCAGGTAGCTGAGGGAAGAAACAGATGGGTCACTTGTTCCCATGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CAA 90 bp | TGCTCAGGCTTATACTCACAGCCTGTGCAGAGTGAACAAACATACACACAAATACCCCCTGGAATTTCCTaGGGCAGCTGCATCGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: CSGLYSQPVQSEQTYTQIPPGIS*GSCIGE Trigger: TTCGCCGATGCAGCTGCCCAAGGAAATTCCAGGGGG...TATTTGTGTGTATGTTTGTTCACTCTGCACAGGCTGTGAGTATAAGCCTGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
||
| CDS-3UTR CAA 90 bp | AGGGAAATACCTAGACTTGCAGTTAGATACAGAAATACACCAGCTTTTGCTCAGGCCACACTGGAAGCCTaGTTGGTCTACAGACGAAGA | + |
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Preference number: 5 (lower is better) Translates to: REIPRLAVRYRNTPAFAQATLEA*LVYRRR Trigger: TCTTCGTCTGTAGACCAACAAGGCTTCCAGTGTGGC...CTGAGCAAAAGCTGGTGTATTTCTGTATCTAACTGCAAGTCTAGGTATTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| CDS-3UTR CAA 90 bp | TGCTCAGGCTTATACTCACAGCCTGTGCAGAGTGAACAAACATACACACAAATAGACGAAGAAGGCTTTTaGCTAAGAGAGCAGTCATGC | + |
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Preference number: 5 (lower is better) Translates to: CSGLYSQPVQSEQTYTQIDEEGF*LREQSC Trigger: GCATGACTGCTCTCTTAGCAAAAAGCCTTCTTCGTC...TATTTGTGTGTATGTTTGTTCACTCTGCACAGGCTGTGAGTATAAGCCTGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| CDS-3UTR CAA 90 bp | GAGTTAGGGAAATACCTAGACTTGCAGTTAGATACAGAAATACACCAGCTTTTGTCTGACAGCCACAGTTaGATTCATCAGGAGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: ELGKYLDLQLDTEIHQLLSDSHS*IHQELQ Trigger: TTGGAGCTCCTGATGAATCAAACTGTGGCTGTCAGA...CAAAAGCTGGTGTATTTCTGTATCTAACTGCAAGTCTAGGTATTTCCCTAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| CDS CAA 72 bp | AGGACACGCATACACCTCCGTTCTGACAGCCACAGTTaGATTCATCAGGAGCTCCAAGTACACTGCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: RTRIHLRSDSHS*IHQELQVHCHL Trigger: AAGGTGGCAGTGTACTTGGAGCTCCTGATGAATCAAACTGTGGCTGTCAGAACGGAGGTGTATGCGTGTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| CDS GCA 72 bp | AGCCACAGTTTGATTCATCAGGAGCTCCAAGTACACTaGCACCTTCAGAGTTTTTCACCACCAAGGCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SHSLIHQELQVH*HLQSFSPPRRR Trigger: TCTGCGCCTTGGTGGTGAAAAACTCTGAAGGTGGCAGTGTACTTGGAGCTCCTGATGAATCAAACTGTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022368.4 |
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| CDS GCA 72 bp | AAGTACACTGCCACCCTGCAAGAGATGAAGGTGACATaGTTTCAGAGTTTTTCACCACCAAGGCGCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: KYTATLQEMKVT*FQSFSPPRRRG Trigger: TCCTCTGCGCCTTGGTGGTGAAAAACTCTGAAAGCATGTCACCTTCATCTCTTGCAGGGTGGCAGTGTACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224141.2 |
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