Pregenerated sensors for PLATR25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074863Ensembl transcript IDs: ENSMUST00000143260.2, ENSMUST00000220733.2, ENSMUST00000221996.2, ENSMUST00000222303.2, ENSMUST00000222477.2, ENSMUST00000223219.2, ENSMUST00000223528.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAGATTAAGGAAATGTTCCCCTACTGGAGAAAATATGTCACTGTaGCTGAACTTCAGAGTTTACATCCTTACACCATGTCTAGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: GRLRKCSPTGENMSL*LNFRVYILTPCLVP Trigger: GGGAACTAGACATGGTGTAAGGATGTAAACTCTGAAGTTCAGCCACAGTGACATATTTTCTCCAGTAGGGGAACATTTCCTTAATCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCTGTATGTATTCTTCTATGCTTCTGGAGATCACTGCTTTGTCTAAATACCCCACTCCTCTTGAGTaGAGTTCACATGCACGTCCC | + |
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Preference number: 2 (lower is better) Translates to: FSCMYSSMLLEITALSKYPTPLE*SSHARP Trigger: GGGACGTGCATGTGAACTTCACTCAAGAGGAGTGGG...GTATTTAGACAAAGCAGTGATCTCCAGAAGCATAGAAGAATACATACAGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTTATGCTTTTGAAGATGCCTGTGACATACACAGGCTTTCACACATAGATGGTTTCTCTGCACTCTaGATTCTTTCATGCCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: FFYAFEDACDIHRLSHIDGFSAL*ILSCPR Trigger: TCTCGGGCATGAAAGAATTCAGAGTGCAGAGAAACC...ATCTATGTGTGAAAGCCTGTGTATGTCACAGGCATCTTCAAAAGCATAAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| 3UTR CAA 90 bp | CTTCCTTTATTTCCTGCTATAAGAAGGTACAGCAGCTTAATTTTCTaGGAAATCAGCATGCACATCCTCACACAAAGCCACAGACAAATC | + |
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Preference number: 2 (lower is better) Translates to: LPLFPAIRRYSSLIF*EISMHILTQSHRQI Trigger: GATTTGTCTGTGGCTTTGTGTGAGGATGTGCATGCTGATTTCCAAGAAAATTAAGCTGCTGTACCTTCTTATAGCAGGAAATAAAGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTTATACAAGAATTCATTACTATAACACAGGAGTGGAGGCATCTGAAGGCATATGTCACTGTGGCTaGACTTCAGAGTTTACATCC | + |
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Preference number: 2 (lower is better) Translates to: SSYTRIHYYNTGVEASEGICHCG*TSEFTS Trigger: GGATGTAAACTCTGAAGTTCAGCCACAGTGACATAT...GCCTTCAGATGCCTCCACTCCTGTGTTATAGTAATGAATTCTTGTATAAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTACTCTTTTACGAAGTTGGAGACTATGTTGAGCAAAGGCTTCAACAAATTGGGTTTCTCTGCACTCTaGATTCTTTCATGCCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LYSFTKLETMLSKGFNKLGFSAL*ILSCLV Trigger: CACAAGGCATGAAAGAATTCAGAGTGCAGAGAAACC...CAATTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACTTCGTAAAAGAGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACTCTGAATTCTTTCATGCCCGAGAAGAGAATTGGCACATTTGAAAGCTTTCTTTGCTTACATTCCTaGAGTTACCCCTTCATTATG | + |
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Preference number: 2 (lower is better) Translates to: CTLNSFMPEKRIGTFESFLCLHS*SYPFIM Trigger: CATAATGAAGGGGTAACTGCAGGAATGTAAGCAAAG...AAAGCTTTCAAATGTGCCAATTCTCTTCTCGGGCATGAAAGAATTCAGAGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143260.2 ENSMUST00000222303.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCATGCCTTTGAGCATGACTGTGAGCATGTAAAGCAAAGGCTTTACCATGTTCTTTGCTTACATTCCTaGAGTTACCCCTTCATTATG | + |
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Preference number: 2 (lower is better) Translates to: FHAFEHDCEHVKQRLYHVLCLHS*SYPFIM Trigger: CATAATGAAGGGGTAACTGCAGGAATGTAAGCAAAG...AACATGGTAAAGCCTTTGCTTTACATGCTCACAGTCATGCTCAAAGGCATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143260.2 ENSMUST00000222303.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGAGTTTACATCCTTACACCATGTCTAGTTCCCACACTGTGAAGTGCAAAAAGATGACTGTCATATaGAAAGGCTTACCACATTGT | + |
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Preference number: 2 (lower is better) Translates to: LQSLHPYTMSSSHTVKCKKMTVI*KGLPHC Trigger: ACAATGTGGTAAGCCTTTGCATATGACAGTCATCTT...TTTGCACTTCACAGTGTGGGAACTAGACATGGTGTAAGGATGTAAACTCTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTTATACAAGAATTCATTACTATAACACAGGAGTGGAGGCATCTGAAGGCTTTATAGGGCTTCCCTaGAGCATGGACTTTTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: SSYTRIHYYNTGVEASEGFIGLP*SMDFSH Trigger: ATGAGAAAAGTCCATGCTGCAGGGAAGCCCTATAAA...GCCTTCAGATGCCTCCACTCCTGTGTTATAGTAATGAATTCTTGTATAAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTTATGCTTTTGAAGATGCCTGTGACATACACAGGCTTTCACACATAGATCTATGTGACTGGAGATaGCTATGTTGTGAAAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FFYAFEDACDIHRLSHIDLCDWR*LCCEKA Trigger: AGCCTTTTCACAACATAGTCATCTCCAGTCACATAG...ATCTATGTGTGAAAGCCTGTGTATGTCACAGGCATCTTCAAAAGCATAAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| 3UTR-3UTR TCA 90 bp | CGTTTTACCACACAGATAATATTCAGAGGGTTTCTTGCCAATACAATATGTTCAAAGGCTTCAACAAATTaGATCACTCCATGGGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: RFTTQIIFRGFLANTICSKASTN*ITPWGF Trigger: GAAACCCCATGGAGTGATTCAATTTGTTGAAGCCTT...TGAACATATTGTATTGGCAAGAAACCCTCTGAATATTATCTGTGTGGTAAAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTTATGCTTTTGAAGATGCCTGTGACATACACAGGCTTTCACACATAGATGAGGTTACCAAGTTGTaGAAAGGCTTTATCACATTC | + |
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Preference number: 2 (lower is better) Translates to: FFYAFEDACDIHRLSHIDEVTKL*KGFITF Trigger: GAATGTGATAAAGCCTTTTCACAACTTGGTAACCTC...ATCTATGTGTGAAAGCCTGTGTATGTCACAGGCATCTTCAAAAGCATAAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCTGTATGTATTCTTCTATGCTTCTGGAGATCACTGCTTTGTCTAAATACAAGGCTTCAACAAATTaGATAACTCCATGGGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: FSCMYSSMLLEITALSKYKASTN*ITPWGF Trigger: GAAACCCCATGGAGTTATTCAATTTGTTGAAGCCTT...GTATTTAGACAAAGCAGTGATCTCCAGAAGCATAGAAGAATACATACAGGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTGTATGTATTCTTCTATGCTTCTGGAGATCACTGCTTTGTCTAAATACATCTTCTCCATCTCCTaGTACTTGGACAATGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: FSCMYSSMLLEITALSKYIFSIS*YLDNVL Trigger: AAGAACATTGTCCAAGTACCAGGAGATGGAGAAGAT...GTATTTAGACAAAGCAGTGATCTCCAGAAGCATAGAAGAATACATACAGGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
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| 3UTR-3UTR TCA 90 bp | CGTTTTACCACACAGATAATATTCAGAGGGTTTCTTGCCAATACAATATGTTCAAGTTGGAGACTATGTTaGGCAAAGGCTTCAACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RFTTQIIFRGFLANTICSSWRLC*AKASTN Trigger: ATTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACT...TGAACATATTGTATTGGCAAGAAACCCTCTGAATATTATCTGTGTGGTAAAACG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| 3UTR-3UTR CCA 90 bp | CGTTTTACCACACAGATAATATTCAGAGGGTTTCTTGCCAATACAATATGTTCACTTCTTTTATGCGTTTaGAGATCACGATTTTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: RFTTQIIFRGFLANTICSLLLCV*RSRFCE Trigger: TTCACAAAATCGTGATCTCCAAACGCATAAAAGAAG...TGAACATATTGTATTGGCAAGAAACCCTCTGAATATTATCTGTGTGGTAAAACG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTACTCTTTTACGAAGTTGGAGACTATGTTGAGCAAAGGCTTCAACAAATTGAATCCTTTCATGCCTTaGAGCATGACTGTGAGCATG | + |
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Preference number: 3 (lower is better) Translates to: LYSFTKLETMLSKGFNKLNPFMP*SMTVSM Trigger: CATGCTCACAGTCATGCTCAAAGGCATGAAAGGATT...CAATTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACTTCGTAAAAGAGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
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| 3UTR GCA 72 bp | CATCTGAAGGCTTACCCAGTTTTCCTTCATCATGAATaGGCTCATGTAACACAAAGCAATCATAAAGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: HLKAYPVFLHHE*AHVTQSNHKGL Trigger: TAAGCCTTTATGATTGCTTTGTGTTACATGAGCGCATTCATGATGAAGGAAAACTGGGTAAGCCTTCAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTTATGCTTTTGAAGATGCCTGTGACATACACAGGCTTTCACACATAGATAAAGGCTTCAACAAATaGAATCACTCCATGGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: FFYAFEDACDIHRLSHIDKGFNK*NHSMGF Trigger: AAACCCCATGGAGTGATTCAATTTGTTGAAGCCTTT...ATCTATGTGTGAAAGCCTGTGTATGTCACAGGCATCTTCAAAAGCATAAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| 3UTR-3UTR CAA 90 bp | CGTTTTACCACACAGATAATATTCAGAGGGTTTCTTGCCAATACAATATGTTCAAAGTTGGAGACTATGTaGAGCAAAGGCTTCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RFTTQIIFRGFLANTICSKLETM*SKGFNK Trigger: TTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACTT...TGAACATATTGTATTGGCAAGAAACCCTCTGAATATTATCTGTGTGGTAAAACG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| CDS-3UTR TCA 90 bp | TTTCATGCCTTTGAGCATGACTGTGAGCATGTAAAGCAAAGGCTTTACCATGTTCCCACTCCTCTTGAGTaGAGTTCACATGCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: FHAFEHDCEHVKQRLYHVPTPLE*SSHARP Trigger: GGGACGTGCATGTGAACTTCACTCAAGAGGAGTGGG...AACATGGTAAAGCCTTTGCTTTACATGCTCACAGTCATGCTCAAAGGCATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143260.2 ENSMUST00000222303.2 |
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| 3UTR CAA 72 bp | CCACCTCTGTCTCCCCAGTATGTGCTCCTTGATGTATaGGGAGATAAGTGTGTTGGGATACGTTTTACCACA | + |
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Preference number: 4 (lower is better) Translates to: PPLSPQYVLLDV*GDKCVGIRFTT Trigger: TGTGGTAAAACGTATCCCAACACACTTATCTCCCAATACATCAAGGAGCACATACTGGGGAGACAGAGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| CDS-3UTR GCA 90 bp | CTGTATGAATCCTTTCATGCCTTTGAGCATGACTGTGAGCATGTAAAGCAAAGGTGTGTGTCTCAAGGCTaGAGCATCCATGTAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: LYESFHAFEHDCEHVKQRCVSQG*SIHVED Trigger: GTCTTCTACATGGATGCTGCAGCCTTGAGACACACA...CCTTTGCTTTACATGCTCACAGTCATGCTCAAAGGCATGAAAGGATTCATACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143260.2 ENSMUST00000222303.2 |
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| CDS-3UTR TCA 90 bp | CGTTTTACCACACAGATAATATTCAGAGGGTTTCTTGCCAATACAATATGTTCACCCACTCCTCTTGAGTaGAGTTCACATGCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RFTTQIIFRGFLANTICSPTPLE*SSHARP Trigger: GGGACGTGCATGTGAACTTCACTCAAGAGGAGTGGG...TGAACATATTGTATTGGCAAGAAACCCTCTGAATATTATCTGTGTGGTAAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
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| CDS-3UTR TCA 90 bp | CATGCCTTGTGTGTCTTCCAAAACTTTGACAATGTTCTTCAATATTTTTGTCGTCCCACTCCTCTTGAGTaGAGTTCACATGCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HALCVFQNFDNVLQYFCRPTPLE*SSHARP Trigger: GGGACGTGCATGTGAACTTCACTCAAGAGGAGTGGG...ACGACAAAAATATTGAAGAACATTGTCAAAGTTTTGGAAGACACACAAGGCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223528.2 |
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| CDS-3UTR TCA 90 bp | GCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATCCCACTCCTCTTGAGTaGAGTTCACATGTACGTCTT | + |
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Preference number: 4 (lower is better) Translates to: AFEDSCDVHGLSHIDHIHPTPLE*SSHVRL Trigger: AAGACGTACATGTGAACTTCACTCAAGAGGAGTGGG...ATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| CDS-3UTR GCA 90 bp | CATGTACGTCTTTATAAGTCACTGCATTCTGTAGAATCTTCTCCATCTCCTGGTTGTGTGTCTCAAGGCTaGAGCATCCATGTAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: HVRLYKSLHSVESSPSPGCVSQG*SIHVED Trigger: GTCTTCTACATGGATGCTGCAGCCTTGAGACACACA...ACCAGGAGATGGAGAAGATTCTACAGAATGCAGTGACTTATAAAGACGTACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
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| CDS-3UTR TCA 90 bp | AGCATGGACTTTTCTCATAATTTCCAGAATGACTCGTACACGCACAAGCTTTACGGTTTCTCTGCACTCTaGATTCTTTCATGCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: SMDFSHNFQNDSYTHKLYGFSAL*ILSCLV Trigger: CACAAGGCATGAAAGAATTCAGAGTGCAGAGAAACC...GTAAAGCTTGTGCGTGTACGAGTCATTCTGGAAATTATGAGAAAAGTCCATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| CDS-3UTR TCA 90 bp | GCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATGGTTTCTCTGCACTCTaGATTCTTTCATGCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: AFEDSCDVHGLSHIDHIHGFSAL*ILSCLV Trigger: CACAAGGCATGAAAGAATTCAGAGTGCAGAGAAACC...ATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGTTTACATCCTTACACCATGTCTAGTTCCCACACTGTGAAGTGCAAAGAGATTACTGTGACTTaGAAAGGCTTTTTCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LQSLHPYTMSSSHTVKCKEITVT*KGFFPL Trigger: CAGTGGGAAAAAGCCTTTTCAAGTCACAGTAATCTC...TTTGCACTTCACAGTGTGGGAACTAGACATGGTGTAAGGATGTAAACTCTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| CDS-3UTR TCA 90 bp | CTCCATCTCCTGGTACTTGGACAATGTTCTTCAGTATTTTTGTCATCCCAATTACTGCCATCCAATGACTaGGAAGGGTCAGCAGTATTA | + |
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Preference number: 4 (lower is better) Translates to: LHLLVLGQCSSVFLSSQLLPSND*EGSAVL Trigger: TAATACTGCTGACCCTTCTCAGTCATTGGATGGCAG...TAATTGGGATGACAAAAATACTGAAGAACATTGTCCAAGTACCAGGAGATGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCTGTATGTATTCTTCTATGCTTCTGGAGATCACTGCTTTGTCTAAATACCATTCTGCCATCCAATaGCTGAGAAGGGTCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: FSCMYSSMLLEITALSKYHSAIQ*LRRVSS Trigger: ACTGCTGACCCTTCTCAGTCATTGGATGGCAGAATG...GTATTTAGACAAAGCAGTGATCTCCAGAAGCATAGAAGAATACATACAGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
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| CDS-3UTR CCA 90 bp | TTTGTCGTCCCAATTAAATCCTATAGCGATGAGGTTCCTGTAGGTCTCCAGCATCCATCTCCTGGTACTTaGACAATGTTCTTCAGTATT | + |
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Preference number: 4 (lower is better) Translates to: FVVPIKSYSDEVPVGLQHPSPGT*TMFFSI Trigger: AATACTGAAGAACATTGTCCAAGTACCAGGAGATGG...ATGCTGGAGACCTACAGGAACCTCATCGCTATAGGATTTAATTGGGACGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223528.2 |
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| CDS-3UTR CCA 90 bp | TCCTTTCATGCCTTTGAGCATGACTGTGAGCATGTAAAGCAAAGGCTTTACCATACCTTCTCCATCTCCTaGTACTTGGACAATGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SFHAFEHDCEHVKQRLYHTFSIS*YLDNVL Trigger: AAGAACATTGTCCAAGTACCAGGAGATGGAGAAGGT...ATGGTAAAGCCTTTGCTTTACATGCTCACAGTCATGCTCAAAGGCATGAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143260.2 ENSMUST00000222303.2 |
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| CDS-3UTR CCA 90 bp | TTTGTCGTCCCAATTAAATCCTATAGCGATGAGGTTCCTGTAGGTCTCCAGCATATCTTCTCCATCTCCTaGTACTTGGACAATGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FVVPIKSYSDEVPVGLQHIFSIS*YLDNVL Trigger: AAGAACATTGTCCAAGTACCAGGAGATGGAGAAGAT...ATGCTGGAGACCTACAGGAACCTCATCGCTATAGGATTTAATTGGGACGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223528.2 |
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| 3UTR CAA 72 bp | TTTCCTGCTATAAGAAGGTACAGCAGCTTAATTTTCTaGGAAATCAGCATGCACATCCTCACACAAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FPAIRRYSSLIF*EISMHILTQSH Trigger: GTGGCTTTGTGTGAGGATGTGCATGCTGATTTCCAAGAAAATTAAGCTGCTGTACCTTCTTATAGCAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| CDS-3UTR TCA 90 bp | CATAATTTCCAGAATGACTCGTACACGCACAAGCTTTACCACATTGCTTATTTTCCCACTCCTCTTGAGTaGAGTTCACATGTACGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HNFQNDSYTHKLYHIAYFPTPLE*SSHVRL Trigger: AAGACGTACATGTGAACTTCACTCAAGAGGAGTGGG...AAAATAAGCAATGTGGTAAAGCTTGTGCGTGTACGAGTCATTCTGGAAATTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| CDS-3UTR TCA 90 bp | TTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATCGGAAGGCTTCAACAAATTaGATAACTCCATGGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FEDSCDVHGLSHIDHIHRKASTN*ITPWGF Trigger: GAAACCCCATGGAGTTATTCAATTTGTTGAAGCCTT...CCGATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGTTTACATCCTTACACCATGTCTAGTTCCCACACTGTGAAGTGCAAAAGTTGGAGACTATGTTaGGCAAAGGCTTCAACAAAT | + |
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Preference number: 4 (lower is better) Translates to: LQSLHPYTMSSSHTVKCKSWRLC*AKASTN Trigger: ATTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACT...TTTGCACTTCACAGTGTGGGAACTAGACATGGTGTAAGGATGTAAACTCTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| CDS-3UTR TCA 90 bp | TTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATCGGGAGGTTACTATGTTGTaGAAAGGCTTTCTCACATTC | + |
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Preference number: 4 (lower is better) Translates to: FEDSCDVHGLSHIDHIHREVTML*KGFLTF Trigger: GAATGTGAGAAAGCCTTTTCACAACATAGTAACCTC...CCGATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
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| CDS-3UTR CCA 90 bp | GCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATGGAGCGTACTATGCCTaGAAAAGACTTTGTCACATT | + |
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Preference number: 4 (lower is better) Translates to: AFEDSCDVHGLSHIDHIHGAYYA*KRLCHI Trigger: AATGTGACAAAGTCTTTTCCAGGCATAGTACGCTCC...ATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
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| CDS-3UTR TCA 90 bp | ATGAATTCTTTTATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACAGGTTTCTCTGCACTCTaGATTCTTTCATGCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: MNSFMLLKIPVTYMGFHTGFSAL*ILSCLV Trigger: CACAAGGCATGAAAGAATTCAGAGTGCAGAGAAACC...TGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATAAAAGAATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| CDS-3UTR TCA 90 bp | AGCATGGACTTTTCTCATAATTTCCAGAATGACTCGTACACGCACAAGCTTTACAAGGCTTCAACAAATTaGATAACTCCATGGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMDFSHNFQNDSYTHKLYKASTN*ITPWGF Trigger: GAAACCCCATGGAGTTATTCAATTTGTTGAAGCCTT...GTAAAGCTTGTGCGTGTACGAGTCATTCTGGAAATTATGAGAAAAGTCCATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR GCA 90 bp | CATGCCTTGTGTGTCTTCCAAAACTTTGACAATGTTCTTCAATATTTTTGTCGTTGTGTGTCTCAAGGCTaGAGCATCCATGTAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HALCVFQNFDNVLQYFCRCVSQG*SIHVED Trigger: GTCTTCTACATGGATGCTGCAGCCTTGAGACACACA...ACGACAAAAATATTGAAGAACATTGTCAAAGTTTTGGAAGACACACAAGGCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000223219.2 ENSMUST00000223528.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAATTCTTTCATGCCCGAGAAGAGAATTGGCACATTTGAAAGCTTTATCACCTTCTCCATCTCCTaGTACTTGGACAATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLNSFMPEKRIGTFESFITFSIS*YLDNVL Trigger: AAGAACATTGTCCAAGTACCAGGAGATGGAGAAGGT...GATAAAGCTTTCAAATGTGCCAATTCTCTTCTCGGGCATGAAAGAATTCAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143260.2 ENSMUST00000222303.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATCGGATTCTTCTATGCTTCTaGAGATCACTGCTTTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FEDSCDVHGLSHIDHIHRILLCF*RSLLCL Trigger: TAGACAAAGCAGTGATCTCCAGAAGCATAGAAGAAT...CCGATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTATACAAGAATTCATTACTATAACACAGGAGTGGAGGCATCTGAAGGCGGAGCGTACTATGCCTaGAAAAGACTTTGTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: SSYTRIHYYNTGVEASEGGAYYA*KRLCHI Trigger: AATGTGACAAAGTCTTTTCCAGGCATAGTACGCTCC...GCCTTCAGATGCCTCCACTCCTGTGTTATAGTAATGAATTCTTGTATAAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| 3UTR CAA 72 bp | TCCAGTTTGGGCTCTTTTACTAAGTTGGAGACTATGTaGAGCAAAGGCTTCAACAAATTGAATCACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSLGSFTKLETM*SKGFNKLNHSM Trigger: CATGGAGTGATTCAATTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACTTAGTAAAAGAGCCCAAACTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
||
| CDS-3UTR TCA 90 bp | ATAAATGTCACCTGCCAAGGCCTTACCATATTATTTACAAAGGTTTCACCAGAGAGTTGGAGACTATGTTaGGCAAAGGCTTCAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: INVTCQGLTILFTKVSPESWRLC*AKASTN Trigger: ATTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACT...CTCTGGTGAAACCTTTGTAAATAATATGGTAAGGCCTTGGCAGGTGACATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATGAGATTACTGTGACTTaGAAAGGCTTTTTCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FFYAFEDSCDVHGLSHIDEITVT*KGFFPL Trigger: CAGTGGGAAAAAGCCTTTTCAAGTCACAGTAATCTC...ATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATAAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR TCA 90 bp | TTTTATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACTGTAGGAGATTACTGTaGCTTGAAAAGGCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYAFEDSCDVHGLSHIDHCRRLL*LEKAFS Trigger: GGAAAAAGCCTTTTCAAGTCACAGTAATCTCCTACA...GTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTATACAAGAATTCATTACTATAACACAGGAGTGGAGGCATCTGAAGGCTGAGATTACAGTGTTCTaGAAAGGCTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LLIQEFITITQEWRHLKAEITVF*KGFTTL Trigger: CAATGTGGTAAAGCCTTTTCAGAACACTGTAATCTC...AGCCTTCAGATGCCTCCACTCCTGTGTTATAGTAATGAATTCTTGTATAAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR TCA 90 bp | ATAAATGTCACCTGCCAAGGCCTTACCATATTATTTACAAAGGTTTCACCAGAGTGTATTTGGAGACTATaGTGTTGGGAAAAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: INVTCQGLTILFTKVSPECIWRL*CWEKAL Trigger: CAAAGCCTTTTCCCAACATCATAGTCTCCAAATACA...CTCTGGTGAAACCTTTGTAAATAATATGGTAAGGCCTTGGCAGGTGACATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATGTATGTATTCTTCTATaGTTCTGGAGATCACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AFEDSCDVHGLSHIDHIHVCILL*FWRSLL Trigger: AAGCAGTGATCTCCAGAAGCATAGAAGAATACATAC...ATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAATTCTTTCATGCCCGAGAAGAGAATTGGCACATTTGAAAGCTTTATCCCATCTCCTGGTACTTaGACAATGTTCTTCAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TLNSFMPEKRIGTFESFIPSPGT*TMFFSI Trigger: AATACTGAAGAACATTGTCCAAGTACCAGGAGATGG...GATAAAGCTTTCAAATGTGCCAATTCTCTTCTCGGGCATGAAAGAATTCAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143260.2 ENSMUST00000222303.2 |
||
| CDS-3UTR CCA 90 bp | CATAATTTCCAGAATGACTCGTACACGCACAAGCTTTACCACATTGCTTATTTTGGAGCGTACTATGCCTaGAAAAGACTTTGTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: HNFQNDSYTHKLYHIAYFGAYYA*KRLCHI Trigger: AATGTGACAAAGTCTTTTCCAGGCATAGTACGCTCC...AAAATAAGCAATGTGGTAAAGCTTGTGCGTGTACGAGTCATTCTGGAAATTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATAAGGCTTCAACAAATTaGATAACTCCATGGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFYAFEDSCDVHGLSHIDKASTN*ITPWGF Trigger: GAAACCCCATGGAGTTATTCAATTTGTTGAAGCCTT...ATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATAAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATAGTTGGAGACTATGTTaGGCAAAGGCTTCAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FFYAFEDSCDVHGLSHIDSWRLC*AKASTN Trigger: ATTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACT...ATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATAAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATTGTAGGAGATTACTGTaGCTTGAAAAGGCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFYAFEDSCDVHGLSHIDCRRLL*LEKAFS Trigger: GGAAAAAGCCTTTTCAAGTCACAGTAATCTCCTACA...ATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATAAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATGAGATTACAGTGTTCTaGAAAGGCTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: FFYAFEDSCDVHGLSHIDEITVF*KGFTTL Trigger: CAATGTGGTAAAGCCTTTTCAGAACACTGTAATCTC...ATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATAAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR TCA 90 bp | TACGAGATAAATGTCACCTGCCAAGGCCTTACCATATTATTTACAAAGGTTTCATGTATTTGGAGACTATaGTGTTGGGAAAAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YEINVTCQGLTILFTKVSCIWRL*CWEKAL Trigger: CAAAGCCTTTTCCCAACATCATAGTCTCCAAATACA...TGAAACCTTTGTAAATAATATGGTAAGGCCTTGGCAGGTGACATTTATCTCGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATTGTATTTGGAGACTATaGTGTTGGGAAAAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FFYAFEDSCDVHGLSHIDCIWRL*CWEKAL Trigger: CAAAGCCTTTTCCCAACATCATAGTCTCCAAATACA...ATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATAAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTTCATACATTACGAGATAAATGTCACCTGCCAAGGCCTTACCATATTAGAGGTTACTATGTTGTaGAAAGGCTTTCTCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: CCFIHYEINVTCQGLTILEVTML*KGFLTF Trigger: GAATGTGAGAAAGCCTTTTCACAACATAGTAACCTC...TAATATGGTAAGGCCTTGGCAGGTGACATTTATCTCGTAATGTATGAAACAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR TCA 90 bp | ATAATTTCCAGAATGACTCGTACACGCACAAGCTTTACCACATTGCTTATTTTCGAGGTTACTATGTTGTaGAAAGGCTTTCTCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: IISRMTRTRTSFTTLLIFEVTML*KGFLTF Trigger: GAATGTGAGAAAGCCTTTTCACAACATAGTAACCTC...GAAAATAAGCAATGTGGTAAAGCTTGTGCGTGTACGAGTCATTCTGGAAATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR GCA 90 bp | ATAAATGTCACCTGCCAAGGCCTTACCATATTATTTACAAAGGTTTCACCAGAGGTATGTATTCTTCTATaGTTCTGGAGATCACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: INVTCQGLTILFTKVSPEVCILL*FWRSLL Trigger: AAGCAGTGATCTCCAGAAGCATAGAAGAATACATAC...CTCTGGTGAAACCTTTGTAAATAATATGGTAAGGCCTTGGCAGGTGACATTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTATACAAGAATTCATTACTATAACACAGGAGTGGAGGCATCTGAAGGCATTCTTCTATGCTTCTaGAGATCACTGCTTTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSYTRIHYYNTGVEASEGILLCF*RSLLCL Trigger: TAGACAAAGCAGTGATCTCCAGAAGCATAGAAGAAT...GCCTTCAGATGCCTCCACTCCTGTGTTATAGTAATGAATTCTTGTATAAGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| 3UTR CAA 72 bp | ATAGAGTTTCTTTCCAGTTTGGGCTCTTTTACTAAGTaGGAGACTATGTTGAGCAAAGGCTTCAACAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: IEFLSSLGSFTK*ETMLSKGFNKL Trigger: CAATTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACTTAGTAAAAGAGCCCAAACTGGAAAGAAACTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
||
| 3UTR CAA 72 bp | TCCAGTTTGTACTCTTTTACGAAGTTGGAGACTATGTaGAGCAAAGGCTTCAACAAATTGAATAACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSLYSFTKLETM*SKGFNKLNNSM Trigger: CATGGAGTTATTCAATTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACTTCGTAAAAGAGTACAAACTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
||
| CDS-3UTR CCA 90 bp | CGTTTTACCACACAGATAATATTCAGAGGGTTTCTTGCCAATACAATATGTTCACCATCTCCTGGTACTTaGACAATGTTCTTCAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RFTTQIIFRGFLANTICSPSPGT*TMFFSI Trigger: AATACTGAAGAACATTGTCCAAGTACCAGGAGATGG...TGAACATATTGTATTGGCAAGAAACCCTCTGAATATTATCTGTGTGGTAAAACG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143260.2 |
||
| CDS-3UTR CCA 90 bp | ATAATTTCCAGAATGACTCGTACACGCACAAGCTTTACCACATTGCTTATTTTCATTCTTCTATGCTTCTaGAGATCACTGCTTTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IISRMTRTRTSFTTLLIFILLCF*RSLLCL Trigger: TAGACAAAGCAGTGATCTCCAGAAGCATAGAAGAAT...GAAAATAAGCAATGTGGTAAAGCTTGTGCGTGTACGAGTCATTCTGGAAATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| 3UTR CAA 72 bp | CTGAATTCTTTCATGCCTTGTGTGTCTTCCAAAACTTaGACAATGTTCTTCAATATTTTTGTCGTCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LNSFMPCVSSKT*TMFFNIFVVPI Trigger: AATTGGGACGACAAAAATATTGAAGAACATTGTCAAAGTTTTGGAAGACACACAAGGCATGAAAGAATTCAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000223219.2 ENSMUST00000223528.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAGGAAATGTTCCCCTACTGGAGAAAATATGTCACTGTGGCTGAACTTCAGAATCCTTTCATGCCTTaGAGCATGACTGTGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: IKEMFPYWRKYVTVAELQNPFMP*SMTVSM Trigger: CATGCTCACAGTCATGCTCAAAGGCATGAAAGGATT...CTGAAGTTCAGCCACAGTGACATATTTTCTCCAGTAGGGGAACATTTCCTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGAGTTTACATCCTTACACCATGTCTAGTTCCCACACTGTGAAGTGCAAAGGAGATTACTGTGACTaGAAAAGGCTTTTTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LQSLHPYTMSSSHTVKCKGDYCD*KRLFPT Trigger: AGTGGGAAAAAGCCTTTTCAAGTCACAGTAATCTCC...TTTGCACTTCACAGTGTGGGAACTAGACATGGTGTAAGGATGTAAACTCTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATCGGTTGGAGACTATGATGTaGGGAAAAGGCTTTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FEDSCDVHGLSHIDHIHRLETMM*GKGFVT Trigger: TGTGACAAAGCCTTTTCCCAACATCATAGTCTCCAA...CCGATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR CAA 90 bp | TATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTAATCCTTTCATGCCTTaGAGCATGACTGTGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: YAFEDSCDVHGLSHIDHINPFMP*SMTVSM Trigger: CATGCTCACAGTCATGCTCAAAGGCATGAAAGGATT...AATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATCGGAAGTTGGAGACTATGTaGAGCAAAGGCTTCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: FEDSCDVHGLSHIDHIHRKLETM*SKGFNK Trigger: TTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACTT...CCGATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR CAA 90 bp | AGCATGGACTTTTCTCATAATTTCCAGAATGACTCGTACACGCACAAGCTTTACTTGGAGACTATGATGTaGGGAAAAGGCTTTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SMDFSHNFQNDSYTHKLYLETMM*GKGFVT Trigger: TGTGACAAAGCCTTTTCCCAACATCATAGTCTCCAA...GTAAAGCTTGTGCGTGTACGAGTCATTCTGGAAATTATGAGAAAAGTCCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR CAA 90 bp | CATAATTTCCAGAATGACTCGTACACGCACAAGCTTTACCACATTGCTTATTTTAATCCTTTCATGCCTTaGAGCATGACTGTGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: HNFQNDSYTHKLYHIAYFNPFMP*SMTVSM Trigger: CATGCTCACAGTCATGCTCAAAGGCATGAAAGGATT...AAAATAAGCAATGTGGTAAAGCTTGTGCGTGTACGAGTCATTCTGGAAATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGAGTTTACATCCTTACACCATGTCTAGTTCCCACACTGTGAAGTGCAAAAAAGGCTTCAACAAATaGAATAACTCCATGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQSLHPYTMSSSHTVKCKKGFNK*NNSMGF Trigger: AAACCCCATGGAGTTATTCAATTTGTTGAAGCCTTT...TTTGCACTTCACAGTGTGGGAACTAGACATGGTGTAAGGATGTAAACTCTGAAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGAGTTTACATCCTTACACCATGTCTAGTTCCCACACTGTGAAGTGCAAATACTCTTTTACGAAGTaGGAGACTATGTTGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQSLHPYTMSSSHTVKCKYSFTK*ETMLSK Trigger: TTTGCTCAACATAGTCTCCAACTTCGTAAAAGAGTA...TTTGCACTTCACAGTGTGGGAACTAGACATGGTGTAAGGATGTAAACTCTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCTTATACAAGAATTCATTACTATAACACAGGAGTGGAGGCATCTGAAGGCGGAGATTACTGTGACTaGAAAAGGCTTTTTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SSYTRIHYYNTGVEASEGGDYCD*KRLFPT Trigger: AGTGGGAAAAAGCCTTTTCAAGTCACAGTAATCTCC...GCCTTCAGATGCCTCCACTCCTGTGTTATAGTAATGAATTCTTGTATAAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR CAA 90 bp | TATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTGGAGATTACTGTGACTaGAAAAGGCTTTTTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: YAFEDSCDVHGLSHIDHIGDYCD*KRLFPT Trigger: AGTGGGAAAAAGCCTTTTCAAGTCACAGTAATCTCC...AATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATCGGTGTTCTCTTATGTATTaGGAGACTATGATGTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FEDSCDVHGLSHIDHIHRCSLMY*ETMMLG Trigger: TCCCAACATCATAGTCTCCAAATACATAAGAGAACA...CCGATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR CAA 90 bp | TTTTATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACAAGTTGGAGACTATGTaGAGCAAAGGCTTCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: FYAFEDSCDVHGLSHIDHKLETM*SKGFNK Trigger: TTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACTT...GTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
||
| CDS-3UTR CAA 90 bp | ATAAATGTCACCTGCCAAGGCCTTACCATATTATTTACAAAGGTTTCACCAGAGAAGTTGGAGACTATGTaGAGCAAAGGCTTCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: INVTCQGLTILFTKVSPEKLETM*SKGFNK Trigger: TTTGTTGAAGCCTTTGCTCAACATAGTCTCCAACTT...CTCTGGTGAAACCTTTGTAAATAATATGGTAAGGCCTTGGCAGGTGACATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATTACTCTTTTACGAAGTaGGAGACTATGTTGAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: AFEDSCDVHGLSHIDHIHYSFTK*ETMLSK Trigger: TTTGCTCAACATAGTCTCCAACTTCGTAAAAGAGTA...ATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
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| CDS-3UTR CAA 90 bp | GCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTCATTGTTCTCTTATGTATTaGGAGACTATGATGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: AFEDSCDVHGLSHIDHIHCSLMY*ETMMLG Trigger: TCCCAACATCATAGTCTCCAAATACATAAGAGAACA...ATGAATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
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| CDS-3UTR CAA 90 bp | TATGCTTTTGAAGATTCCTGTGACGTACATGGGCTTTCACACATAGATCACATTTACTCTTTTACGAAGTaGGAGACTATGTTGAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: YAFEDSCDVHGLSHIDHIYSFTK*ETMLSK Trigger: TTTGCTCAACATAGTCTCCAACTTCGTAAAAGAGTA...AATGTGATCTATGTGTGAAAGCCCATGTACGTCACAGGAATCTTCAAAAGCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 ENSMUST00000222477.2 |
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| CDS-3UTR CAA 90 bp | CTTCTTATACAAGAATTCATTACTATAACACAGGAGTGGAGGCATCTGAAGGCTTGTTCTCTTATGTATTaGGAGACTATGATGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LLIQEFITITQEWRHLKACSLMY*ETMMLG Trigger: TCCCAACATCATAGTCTCCAAATACATAAGAGAACA...AGCCTTCAGATGCCTCCACTCCTGTGTTATAGTAATGAATTCTTGTATAAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| CDS-3UTR CAA 90 bp | CATAATTTCCAGAATGACTCGTACACGCACAAGCTTTACCACATTGCTTATTTTAAAGGCTTCAACAAATaGAATAACTCCATGGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: HNFQNDSYTHKLYHIAYFKGFNK*NNSMGF Trigger: AAACCCCATGGAGTTATTCAATTTGTTGAAGCCTTT...AAAATAAGCAATGTGGTAAAGCTTGTGCGTGTACGAGTCATTCTGGAAATTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220733.2 ENSMUST00000221996.2 |
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| CDS GCA 72 bp | TTGAGTGAAGTTCACATGCACGTCCCCATAAGTCACTaGATTCTTGTCCCGAATGCTGTGTGTCTCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LSEVHMHVPISH*ILVPNAVCLKA Trigger: AGCCTTGAGACACACAGCATTCGGGACAAGAATGCAGTGACTTATGGGGACGTGCATGTGAACTTCACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143260.2 ENSMUST00000222303.2 ENSMUST00000223528.2 |
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| CDS GCA 72 bp | TGCCATCCTTGTCCCGAATGCTGTGTGTCTCAAGGCTaGAGCATCCATGTAGAAGACTCCATATTTTATACT | + |
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Preference number: 6 (lower is better) Translates to: CHPCPECCVSQG*SIHVEDSIFYT Trigger: AGTATAAAATATGGAGTCTTCTACATGGATGCTGCAGCCTTGAGACACACAGCATTCGGGACAAGGATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223219.2 |
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| CDS GCA 72 bp | CTGCATTCTTGTCCCGAATGCTGTGTGTCTCAAGGCTaGAGCATCCATGTAGAAGACTCCATATTTTATACT | + |
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Preference number: 6 (lower is better) Translates to: LHSCPECCVSQG*SIHVEDSIFYT Trigger: AGTATAAAATATGGAGTCTTCTACATGGATGCTGCAGCCTTGAGACACACAGCATTCGGGACAAGAATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143260.2 ENSMUST00000222303.2 ENSMUST00000223528.2 |
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