Pregenerated sensors for PLAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031538Ensembl transcript IDs: ENSMUST00000033941.7
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATTCGGCCAGATACCCCCTCGTGGAGGCCCTGTaGGGCCCCCTGTGTAACTAT | + |
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Preference number: 2 (lower is better) Translates to: GECMISRILWCCDSARYPLVEAL*GPLCNY Trigger: ATAGTTACACAGGGGGCCCCACAGGGCCTCCACGAG...GGGGTATCTGGCCGAATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGTGGAGGGATGGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATAGGCAGGTCCTCCTCTaGATTGAAGGAGCTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GVWRDGECMISRILWCCDRQVLL*IEGAGL Trigger: AAGCCCAGCTCCTTCAATCCAGAGGAGGACCTGCCT...ATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCCATCCCTCCACACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATTCGGCCAGATACCCCCAGGAGGGCAGACTTTaGTCTACCTCTCTTTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: GECMISRILWCCDSARYPQEGRL*STSLFK Trigger: TTTAAAAAGAGAGGTAGACCAAAGTCTGCCCTCCTG...GGGGTATCTGGCCGAATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| 3UTR-3UTR CAA 90 bp | TTATGGTGCTGTGATTCGGCCAGATACCCCTTCCTTCTCGTGGAGGCCCTGTGGAGGTCCTCCTCTGGATaGAAGGAGCTGGGCTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LWCCDSARYPFLLVEALWRSSSG*KELGFL Trigger: AAGAAAGCCCAGCTCCTTCAATCCAGAGGAGGACCT...CCACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| 3UTR CCA 72 bp | GTGGCAGCTCACGAAGATGATGGTGTAAAGAATGCTTaGCCTTTTAGGCGCATCTTCTGTAGAAGAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: VAAHEDDGVKNA*PFRRIFCRRGR Trigger: TCTTCCTCTTCTACAGAAGATGCGCCTAAAAGGCCAAGCATTCTTTACACCATCATCTTCGTGAGCTGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| 3UTR GCA 72 bp | CCCTGTGTAACTATAAAAACACATTCTTGTCCCCAGTaGAAACTTTCACTCCTGAAAGATCAAGTTGTATTT | + |
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Preference number: 3 (lower is better) Translates to: PCVTIKTHSCPQ*KLSLLKDQVVF Trigger: AAATACAACTTGATCTTTCAGGAGTGAAAGTTTGCACTGGGGACAAGAATGTGTTTTTATAGTTACACAGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | TTATGGTGCTGTGATTCGGCCAGATACCCCTTCCTTCTCGTGGAGGCCCTGTGGCCAGGCACATCCTTCTaGCCACAGCCGAGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LWCCDSARYPFLLVEALWPGTSF*PQPRPQ Trigger: CTGGGGCCTCGGCTGTGGGCAGAAGGATGTGCCTGG...CCACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | TTATGGTGCTGTGATTCGGCCAGATACCCCTTCCTTCTCGTGGAGGCCCTGTGGCGTGGAGGTCTTGGTTaGCTCCGCTCCGGGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LWCCDSARYPFLLVEALWRGGLG*LRSGCL Trigger: GAGACACCCGGAGCGGAGGCAACCAAGACCTCCACG...CCACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | TTATGGTGCTGTGATTCGGCCAGATACCCCTTCCTTCTCGTGGAGGCCCTGTGGGGGTACAGTCTGACGTaGGCCTCCTTCAGCCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LWCCDSARYPFLLVEALWGYSLT*ASFSRS Trigger: TGACCGGCTGAAGGAGGCTCACGTCAGACTGTACCC...CCACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCATAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | TTAGGCGCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGGTCCAGTCAGGGAGCTaGAGGTTGGGGTCAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LGASSVEEEEEGRSSSGLVQSGS*RLGSGR Trigger: CCTCCCTGACCCCAACCTGCAGCTCCCTGACTGGAC...CAATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGCGCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGTGGAGGGATGGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATGGGAGGCAGGAGGCCTaGGATGTGGTGAGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: GVWRDGECMISRILWCCDGRQEA*DVVRLW Trigger: CCACAGCCTCACCACATCCCAGGCCTCCTGCCTCCC...ATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCCATCCCTCCACACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | TTATGGTGCTGTGATTCGGCCAGATACCCCTTCCTTCTCGTGGAGGCCCTGTGGACGATGCCTCATGCTTaGCGTAGCCAGAAAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LWCCDSARYPFLLVEALWTMPHA*RSQKAH Trigger: GTGAGCTTTCTGGCTACGGCAAGCATGAGGCATCGT...CCACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | TTATGGTGCTGTGATTCGGCCAGATACCCCTTCCTTCTCGTGGAGGCCCTGTGGCTCCCATGTATTCCCTaGTCAGGCAATGGGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LWCCDSARYPFLLVEALWLPCIP*SGNGKA Trigger: GGCTTTCCCATTGCCTGACCAGGGAATACATGGGAG...CCACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | TTAGGCGCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGGCCTCAGGCCACAGGTaGAGCATGGGGACATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LGASSVEEEEEGRSSSGLASGHR*SMGTCH Trigger: GTGACATGTCCCCATGCTCCACCTGTGGCCTGAGGC...CAATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGCGCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | TTAGGCGCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGGTACCAGGCCGCTGTTaGACCGGCAATATTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: LGASSVEEEEEGRSSSGLVPGRC*TGNIPP Trigger: GGGTGGAATATTGCCGGTGCAACAGCGGCCTGGTAC...CAATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGCGCCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | GCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGAAGGAGACAGATGCTGTGAGGTaGAGCGGCTGGACGGGTACA | + |
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Preference number: 4 (lower is better) Translates to: ASSVEEEEEGRSSSGLKETDAVR*SGWTGT Trigger: TGTACCCGTCCAGCCGCTGCACCTCACAGCATCTGT...CTCCTTCAATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | TTATGGTGCTGTGATTCGGCCAGATACCCCTTCCTTCTCGTGGAGGCCCTGTGGTGTAACTCTTGCCCATaGGGACTATGGAATTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LWCCDSARYPFLLVEALWCNSCP*GLWNSR Trigger: CCTGGAATTCCATAGTCCTCATGGGCAAGAGTTACA...CCACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | TTAGGCGCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGGCCAAGGGTGTGAGGTaGTGTCTGTGTAGAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LGASSVEEEEEGRSSSGLAKGVR*CLCRVL Trigger: GAGGACTCTACACAGACATCACCTCACACCCTTGGC...CAATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGCGCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | GCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGAAGGAGAGCCTGCCAAGGGTGTaGGGTGATGTCTGTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: ASSVEEEEEGRSSSGLKESLPRV*GDVCVE Trigger: CTCTACACAGACATCACCTCACACCCTTGGCAGGCT...CTCCTTCAATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | TTTAGGCGCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTAAAGCAGTGGGCAGCTaGCAGCACCCAGCAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: FRRIFCRRGRGRQVLLWIKAVGS*QHPAGT Trigger: AGTTCCTGCTGGGTGCTGTCAGCTGCCCACTGCTTT...AATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGCGCCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGTGGAGGGATGGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATCGAGTGCCTGGGAGTTaGTCCTCCACGCTGTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: GVWRDGECMISRILWCCDRVPGS*SSTLCN Trigger: GTTACACAGCGTGGAGGACCAACTCCCAGGCACTCG...ATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCCATCCCTCCACACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | GGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATTCGGCCAGATACCCCGGCATTTGGCCTCCTTaGATTGTAGGGCTTCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: GECMISRILWCCDSARYPGIWPP*IVGLQR Trigger: TCGCTGAAGCCCTACAATGCAAGGAGGCCAAATGCC...GGGGTATCTGGCCGAATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | TTAGGCGCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGTCCCTGGTCAGGCAATaGGAAAGCCAGTCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: LGASSVEEEEEGRSSSGLSLVRQ*ESQSTK Trigger: CTTTGTGGACTGGCTTTCCCATTGCCTGACCAGGGA...CAATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGCGCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | TTAGGCGCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGCTTGGGCACATTGCTTaGACTGTGACCTCAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LGASSVEEEEEGRSSSGLLGHIA*TVTSAA Trigger: TGCAGCTGAGGTCACAGTCCAAGCAATGTGCCCAAG...CAATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGCGCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | AAAGCCAGACCTTCATCCTTAAAACTTACAAGTTGTGAAGTACCTGTCACAGGTAGGCCTGGGATGTGGTaGGGCTGTGGGTGCCACGGT | + |
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Preference number: 4 (lower is better) Translates to: KARPSSLKLTSCEVPVTGRPGMW*GCGCHG Trigger: ACCGTGGCACCCACAGCCTCACCACATCCCAGGCCT...ACCTGTGACAGGTACTTCACAACTTGTAAGTTTTAAGGATGAAGGTCTGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | TTTAGGCGCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGAGACCTCTTGTTCTTaGCAAAGATGGCAGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: FRRIFCRRGRGRQVLLWIETSCS*QRWQPA Trigger: GGCAGGCTGCCATCTTTGTCAAGAACAAGAGGTCTC...AATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGCGCCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | GGAGTGTGGAGGGATGGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATCAGTGCCAACAGAGCTaGTCTCTTGGGCACATTGCT | + |
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Preference number: 4 (lower is better) Translates to: GVWRDGECMISRILWCCDQCQQS*SLGHIA Trigger: AGCAATGTGCCCAAGAGAGCAGCTCTGTTGGCACTG...ATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCCATCCCTCCACACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | TTATGGTGCTGTGATTCGGCCAGATACCCCTTCCTTCTCGTGGAGGCCCTGTGGCAAAGCATGTTGCTCTaGTATCTATGTCACAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: LWCCDSARYPFLLVEALWQSMLL*YLCHSV Trigger: AACGCTGTGACATAGATACCAGAGCAACATGCTTTG...CCACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGTGGAGGGATGGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATGCCACAGGTGGAGCATaGGGACATGTCACAGTATTC | + |
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Preference number: 4 (lower is better) Translates to: GVWRDGECMISRILWCCDATGGA*GHVTVF Trigger: GAATACTGTGACATGTCCCCATGCTCCACCTGTGGC...ATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCCATCCCTCCACACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | AAAAGACATTTACACTGTATACAAAGGGATATGTCCCAAGAGTTGAGGAGTGTGCAGGGAGCTGCAGGTTaGGGTCAGGGAGGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KRHLHCIQRDMSQELRSVQGAAG*GQGGRQ Trigger: CTGCCTGCCTCCCTGACCCCAACCTGCAGCTCCCTG...CACACTCCTCAACTCTTGGGACATATCCCTTTGTATACAGTGTAAATGTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | AAAGCCAGACCTTCATCCTTAAAACTTACAAGTTGTGAAGTACCTGTCACAGGTTCCCAAGGCCCAGCTTaGTGGCATTTGGCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KARPSSLKLTSCEVPVTGSQGPA*WHLASL Trigger: CAAGGAGGCCAAATGCCATCAAGCTGGGCCTTGGGA...ACCTGTGACAGGTACTTCACAACTTGTAAGTTTTAAGGATGAAGGTCTGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | GGAGTGTGGAGGGATGGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATATGTCATCTGTTTATTaGTCATGCACACCAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GVWRDGECMISRILWCCDMSSVY*SCTPEG Trigger: GCCCTCTGGTGTGCATGATCAATAAACAGATGACAT...ATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCCATCCCTCCACACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | AAAAGACATTTACACTGTATACAAAGGGATATGTCCCAAGAGTTGAGGAGTGTGCGGACAGGCACTGAGTaGCATTGTACCAGGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KRHLHCIQRDMSQELRSVRTGTE*HCTRPL Trigger: CAGCGGCCTGGTACAATGCCACTCAGTGCCTGTCCG...CACACTCCTCAACTCTTGGGACATATCCCTTTGTATACAGTGTAAATGTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | AAAGCCAGACCTTCATCCTTAAAACTTACAAGTTGTGAAGTACCTGTCACAGGTACCGGGCTCCTCTTCTaGACCTCCCATGTATTCCCT | + |
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Preference number: 4 (lower is better) Translates to: KARPSSLKLTSCEVPVTGTGLLF*TSHVFP Trigger: AGGGAATACATGGGAGGTTCAGAAGAGGAGCCCGGT...ACCTGTGACAGGTACTTCACAACTTGTAAGTTTTAAGGATGAAGGTCTGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | TATAAAAACACATTCTTGTCCCCAGTGCAAACTTTCACTCCTGAAAGATCAAGTTGGACGGGTACAGTCTaGCGTGAGCCTCCTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: YKNTFLSPVQTFTPERSSWTGTV*REPPSA Trigger: GGCTGAAGGAGGCTCACGTCAGACTGTACCCGTCCA...ACTTGATCTTTCAGGAGTGAAAGTTTGCACTGGGGACAAGAATGTGTTTTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | AAAGCCAGACCTTCATCCTTAAAACTTACAAGTTGTGAAGTACCTGTCACAGGTATTAAACAGATGCTGTaGGGTGCAGCGGCTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: KARPSSLKLTSCEVPVTGIKQML*GAAAGR Trigger: CCGTCCAGCCGCTGCACCTCACAGCATCTGTTTAAT...ACCTGTGACAGGTACTTCACAACTTGTAAGTTTTAAGGATGAAGGTCTGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR TCA 90 bp | TGTAACTATAAAAACACATTCTTGTCCCCAGTGCAAACTTTCACTCCTGAAAGAGCACCCAGCAGGAACTaGTCAGCACCCCTCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: CNYKNTFLSPVQTFTPERAPSRN*SAPLHK Trigger: TTTGTGGAGGGGTGCTGATCAGTTCCTGCTGGGTGC...TCTTTCAGGAGTGAAAGTTTGCACTGGGGACAAGAATGTGTTTTTATAGTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | TGTAACTATAAAAACACATTCTTGTCCCCAGTGCAAACTTTCACTCCTGAAAGAGCGTTGGCTCATCTCTaGAGGTCGCTCTGTAGGACC | + |
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Preference number: 4 (lower is better) Translates to: CNYKNTFLSPVQTFTPERALAHL*RSLCRT Trigger: GGTCCTACAGAGCGACCTGCAGAGATGAGCCAACGC...TCTTTCAGGAGTGAAAGTTTGCACTGGGGACAAGAATGTGTTTTTATAGTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | TATTCTAAAGCCAGACCTTCATCCTTAAAACTTACAAGTTGTGAAGTACCTGTCCTCAGCCCCACTTTCTaGTGTGCTCCACGTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: YSKARPSSLKLTSCEVPVLSPTF*CAPRAS Trigger: AGAGGCACGTGGAGCACAGCAGAAAGTGGGGCTGAG...GACAGGTACTTCACAACTTGTAAGTTTTAAGGATGAAGGTCTGGCTTTAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | AAAGCCAGACCTTCATCCTTAAAACTTACAAGTTGTGAAGTACCTGTCACAGGTGTAAGTTGTCTGCGTTaGCTCATCTCTGCAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: KARPSSLKLTSCEVPVTGVSCLR*LISAGR Trigger: GCGACCTGCAGAGATGAGCCAACGCAGACAACTTAC...ACCTGTGACAGGTACTTCACAACTTGTAAGTTTTAAGGATGAAGGTCTGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | AAAAGACATTTACACTGTATACAAAGGGATATGTCCCAAGAGTTGAGGAGTGTGACAAAGATGGCAGCCTaGCAAGGGTGTGAGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: KRHLHCIQRDMSQELRSVTKMAA*QGCEVM Trigger: CATCACCTCACACCCTTGGCAGGCTGCCATCTTTGT...CACACTCCTCAACTCTTGGGACATATCCCTTTGTATACAGTGTAAATGTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | AAAGCCAGACCTTCATCCTTAAAACTTACAAGTTGTGAAGTACCTGTCACAGGTGTTTTATTAAACAGATaGTGTGAGGTGCAGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KARPSSLKLTSCEVPVTGVLLNR*CEVQRL Trigger: CAGCCGCTGCACCTCACAGCATCTGTTTAATAAAAC...ACCTGTGACAGGTACTTCACAACTTGTAAGTTTTAAGGATGAAGGTCTGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR CCA 90 bp | TATAAAAACACATTCTTGTCCCCAGTGCAAACTTTCACTCCTGAAAGATCAAGTCCGGTCAGAGAAGAATaGAGACGATGCCTCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: YKNTFLSPVQTFTPERSSPVREE*RRCLML Trigger: AAGCATGAGGCATCGTCTCCATTCTTCTCTGACCGG...ACTTGATCTTTCAGGAGTGAAAGTTTGCACTGGGGACAAGAATGTGTTTTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS-3UTR GCA 90 bp | TATAAAAACACATTCTTGTCCCCAGTGCAAACTTTCACTCCTGAAAGATCAAGTCGTGGTATACTTCCCTaGCTTAAAGACATAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: YKNTFLSPVQTFTPERSSRGILP*LKDIAP Trigger: TGGTGCTATGTCTTTAAGGCAGGGAAGTATACCACG...ACTTGATCTTTCAGGAGTGAAAGTTTGCACTGGGGACAAGAATGTGTTTTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS TCA 90 bp | CGAGTGCCTGGGAGTTGGTCCTCCACGCTGTGTAACTCTTGCCCATaGGGACTATGGAATTCCAGGGGAGGCAGGAGGCCTGGGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: RVPGSWSSTLCNSCP*GLWNSRGGRRPGMW Trigger: CCACATCCCAGGCCTCCTGCCTCCCCTGGAATTCCATAGTCCTCATGGGCAAGAGTTACACAGCGTGGAGGACCAACTCCCAGGCACTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS TCA 90 bp | GTACCAGGCCGCTGTTGCACCGGCAATATTCCACCCGGCTGCTTCTaGGCATGGGTCGGAGCCACGACTGGTGCTGTTGGTAAGTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: VPGRCCTGNIPPGCF*AWVGATTGAVGKLS Trigger: AGACAACTTACCAACAGCACCAGTCGTGGCTCCGACCCATGCTCAGAAGCAGCCGGGTGGAATATTGCCGGTGCAACAGCGGCCTGGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS CCA 90 bp | CATGGGTCGGAGCCACGACTGGTGCTGTTGGTAAGTTGTCTGCGTTaGCTCATCTCTGCAGGTCGCTCTGTAGGACCGGGCTCCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HGSEPRLVLLVSCLR*LISAGRSVGPGSSS Trigger: AGAAGAGGAGCCCGGTCCTACAGAGCGACCTGCAGAGATGAGCCAACGCAGACAACTTACCAACAGCACCAGTCGTGGCTCCGACCCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS TCA 90 bp | AACAGATGCTGTGAGGTGCAGCGGCTGGACGGGTACAGTCTGACGTaGGCCTCCTTCAGCCGGTCAGAGAAGAATGGAGACGATGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NRCCEVQRLDGYSLT*ASFSRSEKNGDDAS Trigger: TGAGGCATCGTCTCCATTCTTCTCTGACCGGCTGAAGGAGGCTCACGTCAGACTGTACCCGTCCAGCCGCTGCACCTCACAGCATCTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS GCA 90 bp | CCTCCTTCAGCCGGTCAGAGAAGAATGGAGACGATGCCTCATGCTTaGCGTAGCCAGAAAGCTCACACTCTGTCCAGTCAGGGAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPSAGQRRMETMPHA*RSQKAHTLSSQGAA Trigger: TGCAGCTCCCTGACTGGACAGAGTGTGAGCTTTCTGGCTACGGCAAGCATGAGGCATCGTCTCCATTCTTCTCTGACCGGCTGAAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 90 bp | CCATTGAAGCATCTTGGTTCGCTGCAACTTCGGACAGGCACTGAGTaGCATTGTACCAGGCCGCTGTTGCACCGGCAATATTCCACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLKHLGSLQLRTGTE*HCTRPLLHRQYSTR Trigger: CCGGGTGGAATATTGCCGGTGCAACAGCGGCCTGGTACAATGCCACTCAGTGCCTGTCCGAAGTTGCAGCGAACCAAGATGCTTCAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS-3UTR CAA 90 bp | TTATGGTGCTGTGATTCGGCCAGATACCCCTTCCTTCTCGTGGAGGCCCTGTGGTTCCCAAGGCCCAGCTaGATGGCATTTGGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWCCDSARYPFLLVEALWFPRPS*MAFGLL Trigger: AAGGAGGCCAAATGCCATCAAGCTGGGCCTTGGGAA...CCACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS GCA 90 bp | TCAGGGAGGCAGGCAGTGCCAACAGAGCTGCTCTCTTGGGCACATTaGTTGGACTGTGACCTCAGCTGCAGTAATGCGATGTCGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGRQAVPTELLSWAH*LDCDLSCSNAMSLS Trigger: TGACAACGACATCGCATTACTGCAGCTGAGGTCACAGTCCAAGCAATGTGCCCAAGAGAGCAGCTCTGTTGGCACTGCCTGCCTCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS TCA 90 bp | TGCACTCAGCCCCACTTTCTGCTGTGCTCCACGTGCCTCTGTAGGTaGTGCCCTGCTCCTCAAAGCATGTTGCTCTGGTATCTATGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CTQPHFLLCSTCLCR*CPAPQSMLLWYLCH Trigger: GTGACATAGATACCAGAGCAACATGCTTTGAGGAGCAGGGCATCACCTACAGAGGCACGTGGAGCACAGCAGAAAGTGGGGCTGAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS GCA 90 bp | CGACAGAACACTGCTATTCCAGTTGATGCACTCAGCCCCACTTTCTaGTGTGCTCCACGTGCCTCTGTAGGTGATGCCCTGCTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RQNTAIPVDALSPTF*CAPRASVGDALLLK Trigger: TTTGAGGAGCAGGGCATCACCTACAGAGGCACGTGGAGCACAGCAGAAAGTGGGGCTGAGTGCATCAACTGGAATAGCAGTGTTCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 90 bp | GGAGGCAGGCAGTGCCAACAGAGCTGCTCTCTTGGGCACATTGCTTaGACTGTGACCTCAGCTGCAGTAATGCGATGTCGTTGTCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGRQCQQSCSLGHIA*TVTSAAVMRCRCHK Trigger: CTTATGACAACGACATCGCATTACTGCAGCTGAGGTCACAGTCCAAGCAATGTGCCCAAGAGAGCAGCTCTGTTGGCACTGCCTGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS TCA 90 bp | TCCTTGCATTGTAGGGCTTCAGCGACAGAACACTGCTATTCCAGTTaGTGCACTCAGCCCCACTTTCTGCTGTGCTCCACGTGCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLHCRASATEHCYSS*CTQPHFLLCSTCLC Trigger: ACAGAGGCACGTGGAGCACAGCAGAAAGTGGGGCTGAGTGCATCAACTGGAATAGCAGTGTTCTGTCGCTGAAGCCCTACAATGCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS TCA 90 bp | AGCGCACAGCATGTTGTTCGTGACGGTTTTATTAAACAGATGCTGTaGGGTGCAGCGGCTGGACGGGTACAGTCTGACGTGAGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAQHVVRDGFIKQML*GAAAGRVQSDVSLL Trigger: AAGGAGGCTCACGTCAGACTGTACCCGTCCAGCCGCTGCACCTCACAGCATCTGTTTAATAAAACCGTCACGAACAACATGCTGTGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 90 bp | TCTAAACTGAGGCCGTTTGTACTGCCTCAGGCCACAGGTGGAGCATaGGGACATGTCACAGTATTCCCACGTCAGCTTTCGGTCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SKLRPFVLPQATGGA*GHVTVFPRQLSVLH Trigger: ATGAAGGACCGAAAGCTGACGTGGGAATACTGTGACATGTCCCCATGCTCCACCTGTGGCCTGAGGCAGTACAAACGGCCTCAGTTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS GCA 90 bp | GCTCCACGTGCCTCTGTAGGTGATGCCCTGCTCCTCAAAGCATGTTaGTCTGGTATCTATGTCACAGCGTTTCCCTACAAATCCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: APRASVGDALLLKAC*SGIYVTAFPYKSIR Trigger: CCTGATGGATTTGTAGGGAAACGCTGTGACATAGATACCAGAGCAACATGCTTTGAGGAGCAGGGCATCACCTACAGAGGCACGTGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS GCA 90 bp | CTTAGGGCAAGCTGGTGTGCTACAGAACTCCGTGGTATACTTCCCTaGCTTAAAGACATAGCACCAGGGCTTCAAGTCTCGGTCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRASWCATELRGILP*LKDIAPGLQVSVWV Trigger: AACCCAGACCGAGACTTGAAGCCCTGGTGCTATGTCTTTAAGGCAGGGAAGTATACCACGGAGTTCTGTAGCACACCAGCTTGCCCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 90 bp | ATTCCCACGTCAGCTTTCGGTCCTTCATCACATGGCACCAAGGTCTaGCATCACCATCTGGATTCCGACAATAATTGTGTCTGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPTSAFGPSSHGTKV*HHHLDSDNNCVCPG Trigger: GCCTGGGCAGACACAATTATTGTCGGAATCCAGATGGTGATGCCAGACCTTGGTGCCATGTGATGAAGGACCGAAAGCTGACGTGGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS-3UTR CAA 90 bp | GGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATTCGGCCAGATACCCCGGTGCTGTTGGTAAGTaGTCTGCGTTGGCTCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: GECMISRILWCCDSARYPGAVGK*SALAHL Trigger: GAGATGAGCCAACGCAGACAACTTACCAACAGCACC...GGGGTATCTGGCCGAATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 90 bp | ACCTTTCCCAACATAGCAGTCCTCGCTTTTTCCCTTAGGGCAAGCTaGTGTGCTACAGAACTCCGTGGTATACTTCCCTGCCTTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TFPNIAVLAFSLRAS*CATELRGILPCLKD Trigger: GTCTTTAAGGCAGGGAAGTATACCACGGAGTTCTGTAGCACACCAGCTTGCCCTAAGGGAAAAAGCGAGGACTGCTATGTTGGGAAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS-3UTR CAA 90 bp | TTAGGCGCATCTTCTGTAGAAGAGGAAGAGGAAGGCAGGTCCTCCTCTGGATTGGCTCCTCAAAGCATGTaGCTCTGGTATCTATGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGASSVEEEEEGRSSSGLAPQSM*LWYLCH Trigger: GTGACATAGATACCAGAGCAACATGCTTTGAGGAGC...CAATCCAGAGGAGGACCTGCCTTCCTCTTCCTCTTCTACAGAAGATGCGCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS-3UTR CAA 90 bp | GGGGAGTGCATGATCTCAAGGATTTTATGGTGCTGTGATTCGGCCAGATACCCCCCAGCGCACAGCATGTaGTTCGTGACGGTTTTATTA | + |
|
Preference number: 5 (lower is better) Translates to: GECMISRILWCCDSARYPPAHSM*FVTVLL Trigger: TAATAAAACCGTCACGAACAACATGCTGTGCGCTGG...GGGGTATCTGGCCGAATCACAGCACCATAAAATCCTTGAGATCATGCACTCCCC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS GCA 90 bp | GTAATTGTGATTCCCAAGGCCCAGCTTGATGGCATTTGGCCTCCTTaGATTGTAGGGCTTCAGCGACAGAACACTGCTATTCCAGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VIVIPKAQLDGIWPP*IVGLQRQNTAIPVD Trigger: ATCAACTGGAATAGCAGTGTTCTGTCGCTGAAGCCCTACAATGCAAGGAGGCCAAATGCCATCAAGCTGGGCCTTGGGAATCACAATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATAAAAACACATTCTTGTCCCCAGTGCAAACTTTCACTCCTGAAAGATGTACCAGGCCGCTGTaGCACCGGCAATATTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: CNYKNTFLSPVQTFTPERCTRPL*HRQYST Trigger: GGTGGAATATTGCCGGTGCAACAGCGGCCTGGTACA...TCTTTCAGGAGTGAAAGTTTGCACTGGGGACAAGAATGTGTTTTTATAGTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATAAAAACACATTCTTGTCCCCAGTGCAAACTTTCACTCCTGAAAGAAACAGAGCTGCTCTCTaGGGCACATTGCTTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: CNYKNTFLSPVQTFTPERNRAAL*GTLLGL Trigger: CAGTCCAAGCAATGTGCCCAAGAGAGCAGCTCTGTT...TCTTTCAGGAGTGAAAGTTTGCACTGGGGACAAGAATGTGTTTTTATAGTTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 72 bp | CCTCCCGAGTCACCCTGGCATGCATCGTGGAGGTCTTaGTTGCCTCCGCTCCGGGTGTCTCCAGCGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPESPWHASWRS*LPPLRVSPAHS Trigger: GCTGTGCGCTGGAGACACCCGGAGCGGAGGCAACCAAGACCTCCACGATGCATGCCAGGGTGACTCGGGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CAA 72 bp | GCCTCCCGAGTCACCCTGGCATGCATCGTGGAGGTCTaGGTTGCCTCCGCTCCGGGTGTCTCCAGCGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ASRVTLACIVEV*VASAPGVSSAQ Trigger: CTGTGCGCTGGAGACACCCGGAGCGGAGGCAACCAAGACCTCCACGATGCATGCCAGGGTGACTCGGGAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS CAA 72 bp | CCCGAGTCACCCTGGCATGCATCGTGGAGGTCTTGGTaGCCTCCGCTCCGGGTGTCTCCAGCGCACAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: PESPWHASWRSW*PPLRVSPAHSM Trigger: CATGCTGTGCGCTGGAGACACCCGGAGCGGAGGCAACCAAGACCTCCACGATGCATGCCAGGGTGACTCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS GCA 72 bp | CCGAGTCACCCTGGCATGCATCGTGGAGGTCTTGGTTaGCTCCGCTCCGGGTGTCTCCAGCGCACAGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: PSHPGMHRGGLG*LRSGCLQRTAC Trigger: ACATGCTGTGCGCTGGAGACACCCGGAGCGGAGGCAACCAAGACCTCCACGATGCATGCCAGGGTGACTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS CAA 90 bp | AGAGGGCCTCCCGAGTCACCCTGGCATGCATCGTGGAGGTCTTGGTaGCCTCCGCTCCGGGTGTCTCCAGCGCACAGCATGTTGTTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RGPPESPWHASWRSW*PPLRVSPAHSMLFV Trigger: CACGAACAACATGCTGTGCGCTGGAGACACCCGGAGCGGAGGCAACCAAGACCTCCACGATGCATGCCAGGGTGACTCGGGAGGCCCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS TCA 72 bp | CGCTGTTGCACCGGCAATATTCCACCCGGCTGCTTCTaGGCATGGGTCGGAGCCACGACTGGTGCTGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RCCTGNIPPGCF*AWVGATTGAVG Trigger: ACCAACAGCACCAGTCGTGGCTCCGACCCATGCTCAGAAGCAGCCGGGTGGAATATTGCCGGTGCAACAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS CAA 72 bp | CGGACAGGCACTGAGTGGCATTGTACCAGGCCGCTGTaGCACCGGCAATATTCCACCCGGCTGCTTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RTGTEWHCTRPL*HRQYSTRLLLS Trigger: GCTCAGAAGCAGCCGGGTGGAATATTGCCGGTGCAACAGCGGCCTGGTACAATGCCACTCAGTGCCTGTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS CAA 90 bp | GCATGGGTCGGAGCCACGACTGGTGCTGTTGGTAAGTTGTCTGCGTaGGCTCATCTCTGCAGGTCGCTCTGTAGGACCGGGCTCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AWVGATTGAVGKLSA*AHLCRSLCRTGLLF Trigger: GAAGAGGAGCCCGGTCCTACAGAGCGACCTGCAGAGATGAGCCAACGCAGACAACTTACCAACAGCACCAGTCGTGGCTCCGACCCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS CAA 90 bp | CTGCAACTTCGGACAGGCACTGAGTGGCATTGTACCAGGCCGCTGTaGCACCGGCAATATTCCACCCGGCTGCTTCTGAGCATGGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LQLRTGTEWHCTRPL*HRQYSTRLLLSMGR Trigger: CCGACCCATGCTCAGAAGCAGCCGGGTGGAATATTGCCGGTGCAACAGCGGCCTGGTACAATGCCACTCAGTGCCTGTCCGAAGTTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS TCA 72 bp | TGTGAGGTGCAGCGGCTGGACGGGTACAGTCTGACGTaGGCCTCCTTCAGCCGGTCAGAGAAGAATGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CEVQRLDGYSLT*ASFSRSEKNGD Trigger: GTCTCCATTCTTCTCTGACCGGCTGAAGGAGGCTCACGTCAGACTGTACCCGTCCAGCCGCTGCACCTCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS TCA 72 bp | GATGCTGTGAGGTGCAGCGGCTGGACGGGTACAGTCTaGCGTGAGCCTCCTTCAGCCGGTCAGAGAAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: DAVRCSGWTGTV*REPPSAGQRRM Trigger: CATTCTTCTCTGACCGGCTGAAGGAGGCTCACGTCAGACTGTACCCGTCCAGCCGCTGCACCTCACAGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 72 bp | GAGCCACGACTGGTGCTGTTGGTAAGTTGTCTGCGTTaGCTCATCTCTGCAGGTCGCTCTGTAGGACCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EPRLVLLVSCLR*LISAGRSVGPG Trigger: GCCCGGTCCTACAGAGCGACCTGCAGAGATGAGCCAACGCAGACAACTTACCAACAGCACCAGTCGTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CAA 72 bp | GGAGCCACGACTGGTGCTGTTGGTAAGTTGTCTGCGTaGGCTCATCTCTGCAGGTCGCTCTGTAGGACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GATTGAVGKLSA*AHLCRSLCRTG Trigger: CCCGGTCCTACAGAGCGACCTGCAGAGATGAGCCAACGCAGACAACTTACCAACAGCACCAGTCGTGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CAA 90 bp | CACCCGGCTGCTTCTGAGCATGGGTCGGAGCCACGACTGGTGCTGTaGGTAAGTTGTCTGCGTTGGCTCATCTCTGCAGGTCGCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: HPAASEHGSEPRLVL*VSCLRWLISAGRSV Trigger: TACAGAGCGACCTGCAGAGATGAGCCAACGCAGACAACTTACCAACAGCACCAGTCGTGGCTCCGACCCATGCTCAGAAGCAGCCGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS TCA 72 bp | CTCTGCAGGTCGCTCTGTAGGACCGGGCTCCTCTTCTaGACCTCCCATGTATTCCCTGGTCAGGCAATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LCRSLCRTGLLF*TSHVFPGQAMG Trigger: TCCCATTGCCTGACCAGGGAATACATGGGAGGTTCAGAAGAGGAGCCCGGTCCTACAGAGCGACCTGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS TCA 72 bp | GGGAGTTGGTCCTCCACGCTGTGTAACTCTTGCCCATaGGGACTATGGAATTCCAGGGGAGGCAGGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSWSSTLCNSCP*GLWNSRGGRRP Trigger: AGGCCTCCTGCCTCCCCTGGAATTCCATAGTCCTCATGGGCAAGAGTTACACAGCGTGGAGGACCAACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 72 bp | TCAGGGAGGCAGGCAGTGCCAACAGAGCTGCTCTCTTaGGCACATTGCTTGGACTGTGACCTCAGCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SGRQAVPTELLS*AHCLDCDLSCS Trigger: ACTGCAGCTGAGGTCACAGTCCAAGCAATGTGCCCAAGAGAGCAGCTCTGTTGGCACTGCCTGCCTCCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CAA 72 bp | GCATGGGTCGGAGCCACGACTGGTGCTGTTGGTAAGTaGTCTGCGTTGGCTCATCTCTGCAGGTCGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AWVGATTGAVGK*SALAHLCRSLC Trigger: ACAGAGCGACCTGCAGAGATGAGCCAACGCAGACAACTTACCAACAGCACCAGTCGTGGCTCCGACCCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 72 bp | GACCGGGCTCCTCTTCTGAACCTCCCATGTATTCCCTaGTCAGGCAATGGGAAAGCCAGTCCACAAAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DRAPLLNLPCIP*SGNGKASPQSS Trigger: GCTGCTTTGTGGACTGGCTTTCCCATTGCCTGACCAGGGAATACATGGGAGGTTCAGAAGAGGAGCCCGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 72 bp | AGGCCGTTTGTACTGCCTCAGGCCACAGGTGGAGCATaGGGACATGTCACAGTATTCCCACGTCAGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RPFVLPQATGGA*GHVTVFPRQLS Trigger: CGAAAGCTGACGTGGGAATACTGTGACATGTCCCCATGCTCCACCTGTGGCCTGAGGCAGTACAAACGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS TCA 72 bp | CCCCACTTTCTGCTGTGCTCCACGTGCCTCTGTAGGTaGTGCCCTGCTCCTCAAAGCATGTTGCTCTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PHFLLCSTCLCR*CPAPQSMLLWY Trigger: ATACCAGAGCAACATGCTTTGAGGAGCAGGGCATCACCTACAGAGGCACGTGGAGCACAGCAGAAAGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS GCA 72 bp | ACTGCTATTCCAGTTGATGCACTCAGCCCCACTTTCTaGTGTGCTCCACGTGCCTCTGTAGGTGATGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TAIPVDALSPTF*CAPRASVGDAL Trigger: CAGGGCATCACCTACAGAGGCACGTGGAGCACAGCAGAAAGTGGGGCTGAGTGCATCAACTGGAATAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS GCA 72 bp | CAGGCAGTGCCAACAGAGCTGCTCTCTTGGGCACATTaGTTGGACTGTGACCTCAGCTGCAGTAATGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: QAVPTELLSWAH*LDCDLSCSNAM Trigger: CATCGCATTACTGCAGCTGAGGTCACAGTCCAAGCAATGTGCCCAAGAGAGCAGCTCTGTTGGCACTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS GCA 72 bp | GCCGGTCAGAGAAGAATGGAGACGATGCCTCATGCTTaGCGTAGCCAGAAAGCTCACACTCTGTCCAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGQRRMETMPHA*RSQKAHTLSSQ Trigger: CTGACTGGACAGAGTGTGAGCTTTCTGGCTACGGCAAGCATGAGGCATCGTCTCCATTCTTCTCTGACCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 72 bp | CATCTTGGTTCGCTGCAACTTCGGACAGGCACTGAGTaGCATTGTACCAGGCCGCTGTTGCACCGGCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: HLGSLQLRTGTE*HCTRPLLHRQY Trigger: ATATTGCCGGTGCAACAGCGGCCTGGTACAATGCCACTCAGTGCCTGTCCGAAGTTGCAGCGAACCAAGATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CCA 72 bp | TCTGACGTGAGCCTCCTTCAGCCGGTCAGAGAAGAATaGAGACGATGCCTCATGCTTGCCGTAGCCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SDVSLLQPVREE*RRCLMLAVARK Trigger: CTTTCTGGCTACGGCAAGCATGAGGCATCGTCTCCATTCTTCTCTGACCGGCTGAAGGAGGCTCACGTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
||
| CDS CAA 72 bp | GCAGTGCCAACAGAGCTGCTCTCTTGGGCACATTGCTaGGACTGTGACCTCAGCTGCAGTAATGCGATGTCG | + |
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Preference number: 6 (lower is better) Translates to: AVPTELLSWAHC*DCDLSCSNAMS Trigger: CGACATCGCATTACTGCAGCTGAGGTCACAGTCCAAGCAATGTGCCCAAGAGAGCAGCTCTGTTGGCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS CCA 72 bp | CAGTGCCAACAGAGCTGCTCTCTTGGGCACATTGCTTaGACTGTGACCTCAGCTGCAGTAATGCGATGTCGT | + |
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Preference number: 6 (lower is better) Translates to: QCQQSCSLGHIA*TVTSAAVMRCR Trigger: ACGACATCGCATTACTGCAGCTGAGGTCACAGTCCAAGCAATGTGCCCAAGAGAGCAGCTCTGTTGGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS CAA 90 bp | CTGATCAGCACCCCTCCACAAAGGAATCTCTCTCCAGGAGACCTCTaGTTCTTGACAAAGATGGCAGCCTGCCAAGGGTGTGAGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: LISTPPQRNLSPGDL*FLTKMAACQGCEVM Trigger: CATCACCTCACACCCTTGGCAGGCTGCCATCTTTGTCAAGAACAAGAGGTCTCCTGGAGAGAGATTCCTTTGTGGAGGGGTGCTGATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS TCA 72 bp | CATGTTGTTCGTGACGGTTTTATTAAACAGATGCTGTaGGGTGCAGCGGCTGGACGGGTACAGTCTGACGTG | + |
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Preference number: 6 (lower is better) Translates to: HVVRDGFIKQML*GAAAGRVQSDV Trigger: CACGTCAGACTGTACCCGTCCAGCCGCTGCACCTCACAGCATCTGTTTAATAAAACCGTCACGAACAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS GCA 72 bp | AGCTGGTGTGCTACAGAACTCCGTGGTATACTTCCCTaGCTTAAAGACATAGCACCAGGGCTTCAAGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SWCATELRGILP*LKDIAPGLQVS Trigger: CGAGACTTGAAGCCCTGGTGCTATGTCTTTAAGGCAGGGAAGTATACCACGGAGTTCTGTAGCACACCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS GCA 72 bp | CACAGCATGTTGTTCGTGACGGTTTTATTAAACAGATaGTGTGAGGTGCAGCGGCTGGACGGGTACAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: HSMLFVTVLLNR*CEVQRLDGYSL Trigger: CAGACTGTACCCGTCCAGCCGCTGCACCTCACAGCATCTGTTTAATAAAACCGTCACGAACAACATGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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| CDS GCA 72 bp | GCCTCTGTAGGTGATGCCCTGCTCCTCAAAGCATGTTaGTCTGGTATCTATGTCACAGCGTTTCCCTACAAA | + |
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Preference number: 6 (lower is better) Translates to: ASVGDALLLKAC*SGIYVTAFPYK Trigger: TTTGTAGGGAAACGCTGTGACATAGATACCAGAGCAACATGCTTTGAGGAGCAGGGCATCACCTACAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033941.7 |
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