Pregenerated sensors for PLAG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003282Ensembl transcript IDs: ENSMUST00000003369.10, ENSMUST00000137439.8, ENSMUST00000151543.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGGGCTTTCTGGGTATCTCTTACTTCTGACAAATCACCAGGAATaGCAGTGGCCATCGCAGCCTAAACCAGGCCTTCTTGTTGGACAC | + |
|
Preference number: 1 (lower is better) Translates to: KGLSGYLLLLTNHQE*QWPSQPKPGLLVGH Trigger: GTGTCCAACAAGAAGGCCTGGTTTAGGCTGCGATGGCCACTGTCATTCCTGGTGATTTGTCAGAAGTAAGAGATACCCAGAAAGCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR CCA 90 bp | CTTGGTTTGCTTTCACCACGCTTACGTTTCCCTGAAGGGGCTTTCTaGGTATCTCTTACTTCTGACAAATCACCAGGAATGACAGTGGCC | + |
|
Preference number: 1 (lower is better) Translates to: LGLLSPRLRFPEGAF*VSLTSDKSPGMTVA Trigger: GGCCACTGTCATTCCTGGTGATTTGTCAGAAGTAAGAGATACCCAGAAAGCCCCTTCAGGGAAACGTAAGCGTGGTGAAAGCAAACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR TCA 90 bp | CAGGCCTTCTTGTTGGACACCTGGGAACTGCCCAACTCCACTAAGTaGTATAGCTTTAGGTGGCTTCTCAAGTTTCATGTGGTCGTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: QAFLLDTWELPNSTK*YSFRWLLKFHVVVK Trigger: TTTTACGACCACATGAAACTTGAGAAGCCACCTAAAGCTATATCACTTAGTGGAGTTGGGCAGTTCCCAGGTGTCCAACAAGAAGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR CCA 90 bp | ACATTCCTCCTGATTCCCAGAGTAAAAGTAGGGTCTTACAACTTCTaGTTGTGTAAAACTGTAGAACTCCTCAAGTTGCTTTCTGATGGG | + |
|
Preference number: 1 (lower is better) Translates to: TFLLIPRVKVGSYNF*LCKTVELLKLLSDG Trigger: CCCATCAGAAAGCAACTTGAGGAGTTCTACAGTTTTACACAACCAGAAGTTGTAAGACCCTACTTTTACTCTGGGAATCAGGAGGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR CCA 90 bp | GTACATACAAGAAAATTAAGACTCTACATTTTAACACTGGTTCCCTaGAAGATGTGTACTAGAGTTCCGTGCAGGGTAAGAGTTAGGATA | + |
|
Preference number: 1 (lower is better) Translates to: VHTRKLRLYILTLVP*KMCTRVPCRVRVRI Trigger: TATCCTAACTCTTACCCTGCACGGAACTCTAGTACACATCTTCCAGGGAACCAGTGTTAAAATGTAGAGTCTTAATTTTCTTGTATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CCA 90 bp | CACGCTTACGTTTCCCTGAAGGGGCTTTCTGGGTATCTCTTACTTCTGACAAATCAGACTGAAGCATTCTaGGTGCCCAATACCACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: HAYVSLKGLSGYLLLLTNQTEAF*VPNTTQ Trigger: CTGGGTGGTATTGGGCACCCAGAATGCTTCAGTCTG...ATTTGTCAGAAGTAAGAGATACCCAGAAAGCCCCTTCAGGGAAACGTAAGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCAAGATGGATACGCACTaGGCAAGAGCTCACCGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: HPRCTHMRLVFALFSSVSKMDTH*ARAHRA Trigger: TGCCCGGTGAGCTCTTGCTCAGTGCGTATCCATCTT...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CCA 90 bp | TACGTTTCCCTGAAGGGGCTTTCTGGGTATCTCTTACTTCTGACAAATCACCAGTTCTTGTTGGACACCTaGGAACTGCCCAACTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: YVSLKGLSGYLLLLTNHQFLLDT*ELPNST Trigger: AGTGGAGTTGGGCAGTTCCCAGGTGTCCAACAAGAA...CTGGTGATTTGTCAGAAGTAAGAGATACCCAGAAAGCCCCTTCAGGGAAACGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAAAAGGGACTGATTGGTGATGGAGAAGCCTCAGACTTTGATCTTAGCCAGCCATTTTGGCCAATCTaGAGCCCTGTTCCAAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKKGLIGDGEASDFDLSQPFWPI*SPVPNS Trigger: AGAGTTTGGAACAGGGCTTCAGATTGGCCAAAATGG...CTGGCTAAGATCAAAGTCTGAGGCTTCTCCATCACCAATCAGTCCCTTTTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTAATATAAATGGTCATTaGAGGCAGGGCTACACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: ATSLSAFHILGALICVWCNINGH*RQGYTS Trigger: GCTTGTGTAGCCCTGCCTGCAATGACCATTTATATT...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR GCA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCACCTCCCTTCACCCCTaGCCCAACAGAAGGGGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFTSLHP*PNRRGP Trigger: GGGACCCCTTCTGTTGGGGCAGGGGTGAAGGGAGGT...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CCA 90 bp | TTACGTTTCCCTGAAGGGGCTTTCTGGGTATCTCTTACTTCTGACAAATCACCATCCACTAACTCTTCGTaGGAGAGAGCAGAATCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LRFPEGAFWVSLTSDKSPSTNSS*ERAESS Trigger: ACTGGATTCTGCTCTCTCCCACGAAGAGTTAGTGGA...TGGTGATTTGTCAGAAGTAAGAGATACCCAGAAAGCCCCTTCAGGGAAACGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR CAA 90 bp | TGTTTTACATCCATCTTCCTGTTGAGGAGTCTATCACCCCGACGATaGAGGCAGCCCAGCCATTGTAGGTTTCACATATTTACTGTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: CFTSIFLLRSLSPRR*RQPSHCRFHIFTVY Trigger: ATAGACAGTAAATATGTGAAACCTACAATGGCTGGGCTGCCTCAATCGTCGGGGTGATAGACTCCTCAACAGGAAGATGGATGTAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR TCA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAACTGTTTATGGAAAGATaGTTGAAATGCGGCAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKLFMER*LKCGKP Trigger: TGGTTTGCCGCATTTCAATCATCTTTCCATAAACAG...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCGCACTAGAATATAAATaGTCATTGCAGGCAGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: HPRCTHMRLVFALFSSVSALEYK*SLQAGL Trigger: TAGCCCTGCCTGCAATGACCATTTATATTCTAGTGC...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CCA 90 bp | CTGATTCCCAGAGTAAAAGTAGGGTCTTACAACTTCTGGTTGTGTAAAACTGTACAGCTCTGGCAACAGTaGAATTCTCTGGACAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LIPRVKVGSYNFWLCKTVQLWQQ*NSLDKF Trigger: GAACTTGTCCAGAGAATTCCACTGTTGCCAGAGCTG...TACAGTTTTACACAACCAGAAGTTGTAAGACCCTACTTTTACTCTGGGAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR TCA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCCTGGGGTATGAAAGGTaGCAGGCATATAACAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFLGYER*QAYNKT Trigger: GGTTTTGTTATATGCCTGTCACCTTTCATACCCCAG...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR CAA 90 bp | TTTGGTGTTTGCTTTATTTTCCTCTGTTTCCACTATAGATTCAACTaGTTTCTAACATTCCTCCTGATTCCCAGAGTAAAAGTAGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: FGVCFIFLCFHYRFN*FLTFLLIPRVKVGS Trigger: AGACCCTACTTTTACTCTGGGAATCAGGAGGAATGTTAGAAACAAGTTGAATCTATAGTGGAAACAGAGGAAAATAAAGCAAACACCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR TCA 72 bp | TACATGGAACCATCGATCGCATTCCTGGTGGCTGTCTaGCAAGAGGAAGTCCATCGCTACCTCACTCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: YMEPSIAFLVAV*QEEVHRYLTQC Trigger: GCACTGAGTGAGGTAGCGATGGACTTCCTCTTGTCAGACAGCCACCAGGAATGCGATCGATGGTTCCATGTA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAACTATCACCCCGACGATaGAGGCAGCCCAGCCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKLSPRR*RQPSHC Trigger: ACAATGGCTGGGCTGCCTCAATCGTCGGGGTGATAG...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGATTGGTGATGGAGAAGCCTCAGACTTTGATCTTAGCCAGTCCACTAACCCAGTCCTTCCCATTTaGGCCAATCTGAAGCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CLIGDGEASDFDLSQSTNPVLPI*ANLKPC Trigger: ACAGGGCTTCAGATTGGCCAAAATGGGAAGGACTGG...GTTAGTGGACTGGCTAAGATCAAAGTCTGAGGCTTCTCCATCACCAATCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137439.8 |
||
| 3UTR CCA 72 bp | CACCTTATTAATAGATCATCACAGACTGAAGCATTCTaGGTGCCCAATACCACCCAGGCAGCACTGACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLINRSSQTEAF*VPNTTQAALTG Trigger: GCCTGTCAGTGCTGCCTGGGTGGTATTGGGCACCCAGAATGCTTCAGTCTGTGATGATCTATTAATAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137439.8 ENSMUST00000151543.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAAGAGCTCACCGGGCAAGACTGCTTTAGAAGTGATGTGATAGGCTTTTACACATCCATCTTCCTGTaGAGGAGTCTATCACCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: EQELTGQDCFRSDVIGFYTSIFL*RSLSPR Trigger: TCGGGGTGATAGACTCCTCAACAGGAAGATGGATGT...GTAAAAGCCTATCACATCACTTCTAAAGCAGTCTTGCCCGGTGAGCTCTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGCCTTCTTGTTGGACACCTGGGAACTGCCCAACTCCACTAAGTGATATAGAGAAGCCTCAGACTTaGATCTTAGCCAGTCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: TRPSCWTPGNCPTPLSDIEKPQT*ILASPL Trigger: TAGTGGACTGGCTAAGATCAAAGTCTGAGGCTTCTC...TATATCACTTAGTGGAGTTGGGCAGTTCCCAGGTGTCCAACAAGAAGGCCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR-3UTR CAA 90 bp | TACGTTTCCCTGAAGGGGCTTTCTGGGTATCTCTTACTTCTGACAAATCACCAGCTAAACCAGGCCTTCTaGTTGGACACCTGGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: YVSLKGLSGYLLLLTNHQLNQAF*LDTWEL Trigger: CAGTTCCCAGGTGTCCAACAAGAAGGCCTGGTTTAG...CTGGTGATTTGTCAGAAGTAAGAGATACCCAGAAAGCCCCTTCAGGGAAACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR GCA 72 bp | TGGATACGCACTGAGCAAGAGCTCACCGGGCAAGACTaGTTTAGAAGTGATGTGATAGGCTTTTACTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: WIRTEQELTGQD*FRSDVIGFYSA Trigger: TGCAGAGTAAAAGCCTATCACATCACTTCTAAAGCAGTCTTGCCCGGTGAGCTCTTGCTCAGTGCGTATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTGACAAGTTCTGGGGTTaGGCTGTTTTACATCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: ATSLSAFHILGALICVWCDKFWG*AVLHPS Trigger: AGATGGATGTAAAACAGCCAAACCCCAGAACTTGTC...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGGTCGTAAAAGAAAGCAAAAAGGGACTGATTGGTGATGGAGAAGCCTCACCAGTCCTTCCCATTTaGGCCAATCTGAAGCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HVVVKESKKGLIGDGEASPVLPI*ANLKPC Trigger: ACAGGGCTTCAGATTGGCCAAAATGGGAAGGACTGG...TGAGGCTTCTCCATCACCAATCAGTCCCTTTTTGCTTTCTTTTACGACCACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAAGAATATAAATGGTCATaGCAGGCAGGGCTACACAAG | + |
|
Preference number: 3 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKEYKWS*QAGLHK Trigger: CTTGTGTAGCCCTGCCTGCAATGACCATTTATATTC...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTGTAGAACTCCTCAAGTaGCTTTCTGATGGGTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: ATSLSAFHILGALICVWCVELLK*LSDGSN Trigger: ATTAGACCCATCAGAAAGCAACTTGAGGAGTTCTAC...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR CCA 72 bp | GGCAACAGTGGAATTCTCTGGACAAGTTCTGGGGTTTaGCTGTTTTACATCCATCTTCCTGTTGAGGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GNSGILWTSSGV*LFYIHLPVEES Trigger: AGACTCCTCAACAGGAAGATGGATGTAAAACAGCCAAACCCCAGAACTTGTCCAGAGAATTCCACTGTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR TCA 72 bp | TTGTTGGACACCTGGGAACTGCCCAACTCCACTAAGTaGTATAGCTTTAGGTGGCTTCTCAAGTTTCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLDTWELPNSTK*YSFRWLLKFHV Trigger: CACATGAAACTTGAGAAGCCACCTAAAGCTATATCACTTAGTGGAGTTGGGCAGTTCCCAGGTGTCCAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTTCTTACAACTTCTGGTaGTGTAAAACTGTAGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: ATSLSAFHILGALICVWCSYNFW*CKTVEL Trigger: GAGTTCTACAGTTTTACACAACCAGAAGTTGTAAGA...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR CCA 72 bp | TTTACTGTCTATTGTCCCACAATGGCTCTAAGACTCTaGAATAACTGTGGTCCACCATGCAAAATGAGAACG | + |
|
Preference number: 3 (lower is better) Translates to: FTVYCPTMALRL*NNCGPPCKMRT Trigger: CGTTCTCATTTTGCATGGTGGACCACAGTTATTCCAGAGTCTTAGAGCCATTGTGGGACAATAGACAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR CCA 72 bp | CTGATTCCCAGAGTAAAAGTAGGGTCTTACAACTTCTaGTTGTGTAAAACTGTAGAACTCCTCAAGTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LIPRVKVGSYNF*LCKTVELLKLL Trigger: AAGCAACTTGAGGAGTTCTACAGTTTTACACAACCAGAAGTTGTAAGACCCTACTTTTACTCTGGGAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR CCA 72 bp | AGAAAATTAAGACTCTACATTTTAACACTGGTTCCCTaGAAGATGTGTACTAGAGTTCCGTGCAGGGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RKLRLYILTLVP*KMCTRVPCRVR Trigger: TCTTACCCTGCACGGAACTCTAGTACACATCTTCCAGGGAACCAGTGTTAAAATGTAGAGTCTTAATTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR GCA 72 bp | ACACTGGTTCCCTGGAAGATGTGTACTAGAGTTCCGTaGAGGGTAAGAGTTAGGATAAAAATATATTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: TLVPWKMCTRVP*RVRVRIKIYLL Trigger: TAACAAATATATTTTTATCCTAACTCTTACCCTGCACGGAACTCTAGTACACATCTTCCAGGGAACCAGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCTGCACTCATATGCGTTaGGTGTTTGCTTTATTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFCTHMR*VFALFS Trigger: GGAAAATAAAGCAAACACCAAACGCATATGAGTGCA...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | AGCATTCTGGGTGCCCAATACCACCCAGGCAGCACTGACAGGCAACCGCGGAGCTGGACGCGGCGGGCCTaGAAATTGTTTCCTTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SILGAQYHPGSTDRQPRSWTRRA*KLFPYA Trigger: GGCGTAAGGAAACAATTTCCAGGCCCGCCGCGTCCA...GCTCCGCGGTTGCCTGTCAGTGCTGCCTGGGTGGTATTGGGCACCCAGAATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137439.8 ENSMUST00000151543.2 |
||
| 3UTR CAA 72 bp | AATGACAGTGGCCATCGCAGCCTAAACCAGGCCTTCTaGTTGGACACCTGGGAACTGCCCAACTCCACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NDSGHRSLNQAF*LDTWELPNSTK Trigger: CTTAGTGGAGTTGGGCAGTTCCCAGGTGTCCAACAAGAAGGCCTGGTTTAGGCTGCGATGGCCACTGTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| CDS-3UTR CCA 90 bp | GGTGATGGAGAAGCCTCAGACTTTGATCTTAGCCAGTCCACTAACTCTTCGTGGTGGACGCGGCGGGCCTaGAAATTGTTTCCTTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDGEASDFDLSQSTNSSWWTRRA*KLFPYA Trigger: GGCGTAAGGAAACAATTTCCAGGCCCGCCGCGTCCA...CCACGAAGAGTTAGTGGACTGGCTAAGATCAAAGTCTGAGGCTTCTCCATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137439.8 ENSMUST00000151543.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCCATGTGCCTGATTGGTGATGGAGAAGCCTCAGACTTTGATCTTAGCCAGTCTCATATTTCGGGCTaGACGCGGCGGGCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAMCLIGDGEASDFDLSQSHISG*TRRAWK Trigger: TTTCCAGGCCCGCCGCGTCCAGCCCGAAATATGAGA...CTGGCTAAGATCAAAGTCTGAGGCTTCTCCATCACCAATCAGGCACATGGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137439.8 |
||
| CDS-3UTR TCA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTACGCTTACGTTTCCCTaGAGGGGCTTTCTGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: ATSLSAFHILGALICVWCTLTFP*RGFLGI Trigger: GATACCCAGAAAGCCCCTTCAGGGAAACGTAAGCGT...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR GCA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTCTGAGAGAAATCCAATaGTGGTGTGCTGAGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ATSLSAFHILGALICVWCLREIQ*WCAEGV Trigger: GACCCCCTCAGCACACCAGCATTGGATTTCTCTCAG...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGAGCTCACCGGGCAAGACTGCTTTAGAAGTGATGTGATAGGCTTTTACTGGAGAATCCTGGGATaGAGATGGTGCACCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQELTGQDCFRSDVIGFYWRILG*RWCTTL Trigger: CAAGGTGGTGCACCATCTTCATCCCAGGATTCTCCA...GTAAAAGCCTATCACATCACTTCTAAAGCAGTCTTGCCCGGTGAGCTCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTGTGTTTGCAGGGTCCTaGAGATCCTGTGTTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATSLSAFHILGALICVWCVFAGS*RSCVCV Trigger: CACACAAACACAGGATCTTCAGGACCCTGCAAACAC...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGAGCTCACCGGGCAAGACTGCTTTAGAAGTGATGTGATAGGCTTTTACTGCAGTCTTGGTGTGTaGACTTGTAGGGCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EQELTGQDCFRSDVIGFYCSLGV*TCRASL Trigger: GAGAGAGGCCCTACAAGTGCACACACCAAGACTGCA...GTAAAAGCCTATCACATCACTTCTAAAGCAGTCTTGCCCGGTGAGCTCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR GCA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAAGCTGCCGACAGTGAGTaGAGAGAACTTAGACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKAADSE*RELRPT Trigger: TGTGGGTCTAAGTTCTCTGCACTCACTGTCGGCAGC...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCCCCAGCACCATCATCTaGCGACCCACTCTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPRCTHMRLVFALFSSVSPSTII*RPTLRL Trigger: GAGCCTCAGAGTGGGTCGCCAGATGATGGTGCTGGG...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTGTTTTCTCAGGAGAGTaGGTAGCCATGTGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATSLSAFHILGALICVWCVFSGE*VAMCLC Trigger: ACAAAGGCACATGGCTACTCACTCTCCTGAGAAAAC...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAAGTTGTTATCATTTGGTaGGCAGACCCAGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKVVIIW*ADPELC Trigger: GCAGAGCTCTGGGTCTGCTCACCAAATGATAACAAC...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGAGCTCACCGGGCAAGACTGCTTTAGAAGTGATGTGATAGGCTTTTACAGAGAAATCCAATGCTaGTGTGCTGAGGGGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EQELTGQDCFRSDVIGFYREIQC*CAEGVT Trigger: AGTGACCCCCTCAGCACACCAGCATTGGATTTCTCT...GTAAAAGCCTATCACATCACTTCTAAAGCAGTCTTGCCCGGTGAGCTCTTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAAGATCCTGTGTTTGTGTaGGCAGCTGAGAGACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKDPVFV*AAERQK Trigger: CTTCTGTCTCTCAGCTGCCCACACAAACACAGGATC...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR CAA 72 bp | TCCATCTTCCTGTTGAGGAGTCTATCACCCCGACGATaGAGGCAGCCCAGCCATTGTAGGTTTCACATATTT | + |
|
Preference number: 4 (lower is better) Translates to: SIFLLRSLSPRR*RQPSHCRFHIF Trigger: AAATATGTGAAACCTACAATGGCTGGGCTGCCTCAATCGTCGGGGTGATAGACTCCTCAACAGGAAGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR GCA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAAAAACAAAGGCCTTGGTaGAGTCTTGGTGTGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKKQRPW*SLGVCT Trigger: AGTGCACACACCAAGACTGCACCAAGGCCTTTGTTT...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR GCA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATCGTCCAAATCTCTGTaGGCAGTACTGACAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKSSKSL*AVLTEE Trigger: TTCCTCTGTCAGTACTGCGCACAGAGATTTGGACGA...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAACCTGAAGGGGCTTTCTaGGTATCTCTTACTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKPEGAF*VSLTSD Trigger: GTCAGAAGTAAGAGATACCCAGAAAGCCCCTTCAGG...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAACAGCATCCATATCTATaGGGCATGTCATTCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKQHPYL*GMSFPK Trigger: CTTTGGGAATGACATGCCCCATAGATATGGATGCTG...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | TATAGCTTTAGGTGGCTTCTCAAGTTTCATGTGGTCGTAAAAGAAAGCAAAAAGTCTCATATTTCGGGCTaGACGCGGCGGGCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YSFRWLLKFHVVVKESKKSHISG*TRRAWK Trigger: TTTCCAGGCCCGCCGCGTCCAGCCCGAAATATGAGA...CTTTTTGCTTTCTTTTACGACCACATGAAACTTGAGAAGCCACCTAAAGCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| CDS-3UTR GCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCAGAGACAGAAGAGTGTaGTTCCTCCTGGGAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPRCTHMRLVFALFSSVSRDRRV*FLLGIA Trigger: AGCTATTCCCAGGAGGAAGCACACTCTTCTGTCTCT...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | CTGATTCCCAGAGTAAAAGTAGGGTCTTACAACTTCTGGTTGTGTAAAACTGTATGGAAGGTAAGGACATaGCCGGCAGGAGTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIPRVKVGSYNFWLCKTVWKVRT*PAGVHL Trigger: AAGATGAACTCCTGCCGGTCATGTCCTTACCTTCCA...TACAGTTTTACACAACCAGAAGTTGTAAGACCCTACTTTTACTCTGGGAATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCGTTTGTGAATGGCTTTaGCAAGAGTTCACTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPRCTHMRLVFALFSSVSVCEWL*QEFTGR Trigger: CCTTCCAGTGAACTCTTGTCAAAGCCATTCACAAAC...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR GCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCGTGCTCTCAAAATTCTaGAAACACACCTTGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HPRCTHMRLVFALFSSVSVLSKF*KHTLQV Trigger: CACCTGCAAGGTGTGTTTGCAGAATTTTGAGAGCAC...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCGTCCAGGAAATCTACTaGTTCCGTTTTGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPRCTHMRLVFALFSSVSVQEIY*FRFDLQ Trigger: CTGAAGGTCAAAACGGAACCAGTAGATTTCCTGGAC...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCCATGTTGCAGGTAAATaGGTCCAGGAAATCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPRCTHMRLVFALFSSVSHVAGK*VQEIYW Trigger: CCAGTAGATTTCCTGGACCCATTTACCTGCAACATG...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR CAA 72 bp | TATAAAAACTACTGCTCTAGGGTTAGAACCAGGAGCTaGAACCCTCTAGAGAGCAACTCTGATTCTACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKNYCSRVRTRS*NPLESNSDSTK Trigger: CTTCGTAGAATCAGAGTTGCTCTCTAGAGGGTTCAAGCTCCTGGTTCTAACCCTAGAGCAGTAGTTTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCGGTATCTCTTACTTCTaGCAAATCACCAGGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HPRCTHMRLVFALFSSVSGISYF*QITRND Trigger: GTCATTCCTGGTGATTTGTCAGAAGTAAGAGATACC...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | CTGATTCCCAGAGTAAAAGTAGGGTCTTACAACTTCTGGTTGTGTAAAACTGTATCTTCATGTGTCGAGTaGGGTGATCCTTTCGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIPRVKVGSYNFWLCKTVSSCVE*GDPFVQ Trigger: TTGGACGAAAGGATCACCTCACTCGACACATGAAGA...TACAGTTTTACACAACCAGAAGTTGTAAGACCCTACTTTTACTCTGGGAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCAATAGAGATTGCGTATaGGGTAGAACTGAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HPRCTHMRLVFALFSSVSNRDCV*GRTEWA Trigger: TGCCCATTCAGTTCTACCTCATACGCAATCTCTATT...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCGTTTGTGTGGGCAGCTaGGAGACAGAAGAGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFVCVGS*ETEECA Trigger: AGCACACTCTTCTGTCTCTCAGCTGCCCACACAAAC...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR GCA 90 bp | CTGATTCCCAGAGTAAAAGTAGGGTCTTACAACTTCTGGTTGTGTAAAACTGTACAGTGCTCACATTGGTaGTTTTTCTCCTTCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPRVKVGSYNFWLCKTVQCSHW*FFSFTP Trigger: GGGTGTGAAGGAGAAAAAGCACCAATGTGAGCACTG...TACAGTTTTACACAACCAGAAGTTGTAAGACCCTACTTTTACTCTGGGAATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCGATGCTGGAGAATCCTaGGATGAAGATGGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFDAGES*DEDGAP Trigger: TGGTGCACCATCTTCATCCCAGGATTCTCCAGCATC...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCCTACTGGTTCCGTTTTaGCCTTCAGAAGCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFLLVPF*PSEAPD Trigger: ATCAGGAGCTTCTGAAGGTCAAAACGGAACCAGTAG...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCTCGCAGTGCTCACATTaGTGCTTTTTCTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFSQCSH*CFFSFT Trigger: TGTGAAGGAGAAAAAGCACCAATGTGAGCACTGCGA...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCACCCAGAGCTCTGCATaGACTGAAATGGAGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFTQSSA*TEMECY Trigger: ATAACACTCCATTTCAGTCCATGCAGAGCTCTGGGT...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCTCATGTGTATGGAGGTaGTTCTTCAGATGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFSCVWR*FFRWSF Trigger: GAAAGACCATCTGAAGAATCACCTCCATACACATGA...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| 3UTR CAA 72 bp | TGCTTTATTTTCCTCTGTTTCCACTATAGATTCAACTaGTTTCTAACATTCCTCCTGATTCCCAGAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFIFLCFHYRFN*FLTFLLIPRVK Trigger: TTTTACTCTGGGAATCAGGAGGAATGTTAGAAACAAGTTGAATCTATAGTGGAAACAGAGGAAAATAAAGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS TCA 90 bp | CAATGCTGGTGTGCTGAGGGGGTCACTGATAGAGATAGAGCTCTTTaGCAGGGAGAGGTCCCCAGCACCATCATCTGGCGACCCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QCWCAEGVTDRDRAL*QGEVPSTIIWRPTL Trigger: CAGAGTGGGTCGCCAGATGATGGTGCTGGGGACCTCTCCCTGTCAAAGAGCTCTATCTCTATCAGTGACCCCCTCAGCACACCAGCATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS TCA 90 bp | TTTGACAGGGAGAGGTCCCCAGCACCATCATCTGGCGACCCACTCTaGGGCTCTAACCCTAGCTTAGATGACGATGCTGGAGAATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FDRERSPAPSSGDPL*GSNPSLDDDAGESW Trigger: CCAGGATTCTCCAGCATCGTCATCTAAGCTAGGGTTAGAGCCTCAGAGTGGGTCGCCAGATGATGGTGCTGGGGACCTCTCCCTGTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CCA 90 bp | TTAGACCCACAGTGTTTGCAGGGTCCTGAAGATCCTGTGTTTGTGTaGGCAGCTGAGAGACAGAAGAGTGTGCTTCCTCCTGGGAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: LDPQCLQGPEDPVFV*AAERQKSVLPPGNS Trigger: GCTATTCCCAGGAGGAAGCACACTCTTCTGTCTCTCAGCTGCCCACACAAACACAGGATCTTCAGGACCCTGCAAACACTGTGGGTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCGGCCTTGGTGCAGTCTaGGTGTGTGCACTTGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HPRCTHMRLVFALFSSVSGLGAV*VCALVG Trigger: CCCTACAAGTGCACACACCAAGACTGCACCAAGGCC...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTTTAAAGGTCTCTTTGTaGGGGTCATGTGTATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATSLSAFHILGALICVWCLKVSL*GSCVWR Trigger: CCTCCATACACATGACCCCAACAAAGAGACCTTTAA...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | TTTCATGTGGTCGTAAAAGAAAGCAAAAAGGGACTGATTGGTGATGGAGAAGCCCGGCGGGCCTGGAAATaGTTTCCTTACGCCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FHVVVKESKKGLIGDGEARRAWK*FPYASF Trigger: GAAAGAGGCGTAAGGAAACAATTTCCAGGCCCGCCG...GGCTTCTCCATCACCAATCAGTCCCTTTTTGCTTTCTTTTACGACCACATGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151543.2 |
||
| CDS TCA 90 bp | AGAGTGTGCTTCCTCCTGGGAATAGCTCATCCCAAGGCTTCCCACTaGAAGTGGGTTATAAGGGGGACCATTCAATGGTATGAAATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RVCFLLGIAHPKASH*KWVIRGTIQWYEIE Trigger: TTCAATTTCATACCATTGAATGGTCCCCCTTATAACCCACTTTCAGTGGGAAGCCTTGGGATGAGCTATTCCCAGGAGGAAGCACACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CCA 90 bp | CGGCAGGAGTTCATCTTTTATAGGCACAGACATGTTGCAGGTAAATaGGTCCAGGAAATCTACTGGTTCCGTTTTGACCTTCAGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RQEFIFYRHRHVAGK*VQEIYWFRFDLQKL Trigger: GAGCTTCTGAAGGTCAAAACGGAACCAGTAGATTTCCTGGACCCATTTACCTGCAACATGTCTGTGCCTATAAAAGATGAACTCCTGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | GCTACCTCACTCAGTGCATTCCACATCCTAGGTGCACTCATATGCGTTTGGTGTTTCCCAAAGGTAAAGTaGTTATCATTTGGTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATSLSAFHILGALICVWCFPKVK*LSFGEQ Trigger: CTGCTCACCAAATGATAACAACTTTACCTTTGGGAA...ACACCAAACGCATATGAGTGCACCTAGGATGTGGAATGCACTGAGTGAGGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | CATCCTAGGTGCACTCATATGCGTTTGGTGTTTGCTTTATTTTCCTCTGTTTCCTTAGACCCACAGTGTTaGCAGGGTCCTGAAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPRCTHMRLVFALFSSVSLDPQC*QGPEDP Trigger: AGGATCTTCAGGACCCTGCAAACACTGTGGGTCTAA...GGAAACAGAGGAAAATAAAGCAAACACCAAACGCATATGAGTGCACCTAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | CCAAACTCTAGTAAGGCCACCTTATTAATAGATCATCACAGACTGAAGCATTCTCGGCGGGCCTGGAAATaGTTTCCTTACGCCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNSSKATLLIDHHRLKHSRRAWK*FPYASF Trigger: GAAAGAGGCGTAAGGAAACAATTTCCAGGCCCGCCG...AGAATGCTTCAGTCTGTGATGATCTATTAATAAGGTGGCCTTACTAGAGTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137439.8 ENSMUST00000151543.2 |
||
| CDS CCA 90 bp | TATAGGCACAGACATGTTGCAGGTAAATGGGTCCAGGAAATCTACTaGTTCCGTTTTGACCTTCAGAAGCTCCTGATTGTGACTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YRHRHVAGKWVQEIY*FRFDLQKLLIVTLL Trigger: AAGAAGAGTCACAATCAGGAGCTTCTGAAGGTCAAAACGGAACCAGTAGATTTCCTGGACCCATTTACCTGCAACATGTCTGTGCCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | CTGATTCCCAGAGTAAAAGTAGGGTCTTACAACTTCTGGTTGTGTAAAACTGTATTCTGCAAACACACCTaGCAGGTGAGGTCACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LIPRVKVGSYNFWLCKTVFCKHT*QVRSPL Trigger: CAGTGGTGACCTCACCTGCAAGGTGTGTTTGCAGAA...TACAGTTTTACACAACCAGAAGTTGTAAGACCCTACTTTTACTCTGGGAATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | GCCCTTACAGAAGGGAAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAAATGTGCCTTTGTAATTaGTACTTAGAAACAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALTEGKEFPHTGLMSAQKMCLCN*YLETKA Trigger: GGCCTTTGTTTCTAAGTACAAATTACAAAGGCACAT...TTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTTCCCTTCTGTAAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | CTGATTCCCAGAGTAAAAGTAGGGTCTTACAACTTCTGGTTGTGTAAAACTGTATTCGCAGTGCTCACATaGGTGCTTTTTCTCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LIPRVKVGSYNFWLCKTVFAVLT*VLFLLH Trigger: GTGAAGGAGAAAAAGCACCAATGTGAGCACTGCGAA...TACAGTTTTACACAACCAGAAGTTGTAAGACCCTACTTTTACTCTGGGAATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCCTGAAGATCCTGTGTTaGTGTGGGCAGCTGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFLKILC*CGQLRD Trigger: GTCTCTCAGCTGCCCACACAAACACAGGATCTTCAG...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CCA 90 bp | AAGGTAAAGTTGTTATCATTTGGTGAGCAGACCCAGAGCTCTGCATaGACTGAAATGGAGTGTTATAGAGGTTTAACTGCAAAGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KVKLLSFGEQTQSSA*TEMECYRGLTAKCL Trigger: CAAACACTTTGCAGTTAAACCTCTATAACACTCCATTTCAGTCCATGCAGAGCTCTGGGTCTGCTCACCAAATGATAACAACTTTACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCACACTGTTAAAGGCCTaGTCACACAGTTGGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFTLLKA*SHSWQG Trigger: TCCTTGCCAACTGTGTGACAAGGCCTTTAACAGTGT...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTTTCCCCATACAGGGCTAATGAGTGCTCAGAAATTAAAATATAGTTTCTTAGAAACAAAGGCCTaGGTGCAGTCTTGGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KEFPHTGLMSAQKLKYSFLETKA*VQSWCV Trigger: CACACACCAAGACTGCACCAAGGCCTTTGTTTCTAA...GAAACTATATTTTAATTTCTGAGCACTCATTAGCCCTGTATGGGGAAACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS TCA 72 bp | GAGAGGTCCCCAGCACCATCATCTGGCGACCCACTCTaGGGCTCTAACCCTAGCTTAGATGACGATGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ERSPAPSSGDPL*GSNPSLDDDAG Trigger: TCCAGCATCGTCATCTAAGCTAGGGTTAGAGCCTCAGAGTGGGTCGCCAGATGATGGTGCTGGGGACCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS TCA 72 bp | TTTTTCTCCTTCACACCCCCAGATGACTTGCCCGCGTaGGATTTCAGGTGCTCTAGGAGCACACCTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FFSFTPPDDLPA*DFRCSRSTPVL Trigger: GAGCACAGGTGTGCTCCTAGAGCACCTGAAATCTCACGCGGGCAAGTCATCTGGGGGTGTGAAGGAGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CCA 72 bp | TCTAACCCTAGCTTAGATGACGATGCTGGAGAATCCTaGGATGAAGATGGTGCACCACCTTGTAGCTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SNPSLDDDAGES*DEDGAPPCSSI Trigger: GATGGAGCTACAAGGTGGTGCACCATCTTCATCCCAGGATTCTCCAGCATCGTCATCTAAGCTAGGGTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS TCA 72 bp | TTCCTCCTGGGAATAGCTCATCCCAAGGCTTCCCACTaGAAGTGGGTTATAAGGGGGACCATTCAATGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: FLLGIAHPKASH*KWVIRGTIQWY Trigger: ATACCATTGAATGGTCCCCCTTATAACCCACTTTCAGTGGGAAGCCTTGGGATGAGCTATTCCCAGGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CAA 90 bp | AAGGACATGACCGGCAGGAGTTCATCTTTTATAGGCACAGACATGTaGCAGGTAAATGGGTCCAGGAAATCTACTGGTTCCGTTTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: KDMTGRSSSFIGTDM*QVNGSRKSTGSVLT Trigger: GGTCAAAACGGAACCAGTAGATTTCCTGGACCCATTTACCTGCAACATGTCTGTGCCTATAAAAGATGAACTCCTGCCGGTCATGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CAA 72 bp | ACCGGCAGGAGTTCATCTTTTATAGGCACAGACATGTaGCAGGTAAATGGGTCCAGGAAATCTACTGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TGRSSSFIGTDM*QVNGSRKSTGS Trigger: GGAACCAGTAGATTTCCTGGACCCATTTACCTGCAACATGTCTGTGCCTATAAAAGATGAACTCCTGCCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CAA 90 bp | GAACAGCATCCATATCTATGGGGCATGTCATTCCCAAAGGTAAAGTaGTTATCATTTGGTGAGCAGACCCAGAGCTCTGCATGGACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EQHPYLWGMSFPKVK*LSFGEQTQSSAWTE Trigger: TTCAGTCCATGCAGAGCTCTGGGTCTGCTCACCAAATGATAACAACTTTACCTTTGGGAATGACATGCCCCATAGATATGGATGCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CCA 72 bp | AGACATGTTGCAGGTAAATGGGTCCAGGAAATCTACTaGTTCCGTTTTGACCTTCAGAAGCTCCTGATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RHVAGKWVQEIY*FRFDLQKLLIV Trigger: CACAATCAGGAGCTTCTGAAGGTCAAAACGGAACCAGTAGATTTCCTGGACCCATTTACCTGCAACATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CAA 72 bp | CCATATCTATGGGGCATGTCATTCCCAAAGGTAAAGTaGTTATCATTTGGTGAGCAGACCCAGAGCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PYLWGMSFPKVK*LSFGEQTQSSA Trigger: TGCAGAGCTCTGGGTCTGCTCACCAAATGATAACAACTTTACCTTTGGGAATGACATGCCCCATAGATATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CCA 72 bp | TGGTATGAAATTGAACAACTGAGAGAAATCCAATGCTaGTGTGCTGAGGGGGTCACTGATAGAGATAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WYEIEQLREIQC*CAEGVTDRDRA Trigger: AGCTCTATCTCTATCAGTGACCCCCTCAGCACACCAGCATTGGATTTCTCTCAGTTGTTCAATTTCATACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS GCA 72 bp | CAATGGTATGAAATTGAACAACTGAGAGAAATCCAATaGTGGTGTGCTGAGGGGGTCACTGATAGAGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: QWYEIEQLREIQ*WCAEGVTDRDR Trigger: TCTATCTCTATCAGTGACCCCCTCAGCACACCAGCATTGGATTTCTCTCAGTTGTTCAATTTCATACCATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CCA 72 bp | TTGTTATCATTTGGTGAGCAGACCCAGAGCTCTGCATaGACTGAAATGGAGTGTTATAGAGGTTTAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLSFGEQTQSSA*TEMECYRGLTA Trigger: TGCAGTTAAACCTCTATAACACTCCATTTCAGTCCATGCAGAGCTCTGGGTCTGCTCACCAAATGATAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||
| CDS CCA 72 bp | TTCATCTTTTATAGGCACAGACATGTTGCAGGTAAATaGGTCCAGGAAATCTACTGGTTCCGTTTTGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: FIFYRHRHVAGK*VQEIYWFRFDL Trigger: AAGGTCAAAACGGAACCAGTAGATTTCCTGGACCCATTTACCTGCAACATGTCTGTGCCTATAAAAGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003369.10 |
||