Pregenerated sensors for PLAAT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024973Ensembl transcript IDs: ENSMUST00000025929.12, ENSMUST00000148558.3, ENSMUST00000239394.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGATCCCGAACTCCCCGCTGGCTGCTGGGCTCAGGCCCATCCCGCTaGGGCCAGCAGGGACAACGCGCCTGCAGGGAGGTGCGGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: GSRTPRWLLGSGPSR*GQQGQRACREVRTR Trigger: CCTGGTCCGCACCTCCCTGCAGGCGCGTTGTCCCTGCTGGCCCCAGCGGGATGGGCCTGAGCCCAGCAGCCAGCGGGGAGTTCGGGATCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239394.2 |
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| CDS GCA 90 bp | TGGCCATGGGACCCTGGAAAGGCGGATCCCGAACTCCCCGCTGGCTaGTGGGCTCAGGCCCATCCCGCTGGGGCCAGCAGGGACAACGCG | + |
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Preference number: 5 (lower is better) Translates to: WPWDPGKADPELPAG*WAQAHPAGASRDNA Trigger: CGCGTTGTCCCTGCTGGCCCCAGCGGGATGGGCCTGAGCCCAGCAGCCAGCGGGGAGTTCGGGATCCGCCTTTCCAGGGTCCCATGGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239394.2 |
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| CDS CCA 90 bp | GGCGTGGCCATGGGACCCTGGAAAGGCGGATCCCGAACTCCCCGCTaGCTGCTGGGCTCAGGCCCATCCCGCTGGGGCCAGCAGGGACAA | + |
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Preference number: 5 (lower is better) Translates to: GVAMGPWKGGSRTPR*LLGSGPSRWGQQGQ Trigger: TTGTCCCTGCTGGCCCCAGCGGGATGGGCCTGAGCCCAGCAGCCAGCGGGGAGTTCGGGATCCGCCTTTCCAGGGTCCCATGGCCACGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239394.2 |
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| CDS TCA 90 bp | TCTTGTCCACCGGCAGCGGCAGGTATGTGCCATCCAGCTTGTTGTTaGTCTTCCAGGAGCAACCGTGCAGCACATCCTCCAGCCGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SCPPAAAGMCHPACC*SSRSNRAAHPPAGC Trigger: ACAGCCGGCTGGAGGATGTGCTGCACGGTTGCTCCTGGAAGATCAACAACAAGCTGGATGGCACATACCTGCCGCTGCCGGTGGACAAGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS GCA 90 bp | GCAGATTGGGTGTCACTTGACTCTGTACTTGAGGTCTTCGAGATCTaGGTGGGGCGTGGCCATGGGACCCTGGAAAGGCGGATCCCGAAC | + |
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Preference number: 5 (lower is better) Translates to: ADWVSLDSVLEVFEI*VGRGHGTLERRIPN Trigger: GTTCGGGATCCGCCTTTCCAGGGTCCCATGGCCACGCCCCACGCAGATCTCGAAGACCTCAAGTACAGAGTCAAGTGACACCCAATCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CCA 90 bp | ATTGGGTGTCACTTGACTCTGTACTTGAGGTCTTCGAGATCTGCGTaGGGCGTGGCCATGGGACCCTGGAAAGGCGGATCCCGAACTCCC | + |
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Preference number: 5 (lower is better) Translates to: IGCHLTLYLRSSRSA*GVAMGPWKGGSRTP Trigger: GGGAGTTCGGGATCCGCCTTTCCAGGGTCCCATGGCCACGCCCCACGCAGATCTCGAAGACCTCAAGTACAGAGTCAAGTGACACCCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS GCA 90 bp | GTACTTCACCACAGCTCGGTTGCTGAAGATAGAGGTGATGCTCCCTaGCTCAAACTCACTTGGGGGAGCCAGGTGGACCACGCAGTCATC | + |
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Preference number: 5 (lower is better) Translates to: VLHHSSVAEDRGDAP*LKLTWGSQVDHAVI Trigger: GATGACTGCGTGGTCCACCTGGCTCCCCCAAGTGAGTTTGAGGCAGGGAGCATCACCTCTATCTTCAGCAACCGAGCTGTGGTGAAGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS GCA 90 bp | AGGTATGTGCCATCCAGCTTGTTGTTGATCTTCCAGGAGCAACCGTaGAGCACATCCTCCAGCCGGCTGTACTTCACCACAGCTCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: RYVPSSLLLIFQEQP*STSSSRLYFTTARL Trigger: CAACCGAGCTGTGGTGAAGTACAGCCGGCTGGAGGATGTGCTGCACGGTTGCTCCTGGAAGATCAACAACAAGCTGGATGGCACATACCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CCA 90 bp | TCGGTTGCTGAAGATAGAGGTGATGCTCCCTGCCTCAAACTCACTTaGGGGAGCCAGGTGGACCACGCAGTCATCTTCCACATAGATGGC | + |
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Preference number: 5 (lower is better) Translates to: SVAEDRGDAPCLKLT*GSQVDHAVIFHIDG Trigger: GCCATCTATGTGGAAGATGACTGCGTGGTCCACCTGGCTCCCCCAAGTGAGTTTGAGGCAGGGAGCATCACCTCTATCTTCAGCAACCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS TCA 90 bp | TTGCTGGGTGTGAGCTCCAAACTAGTTTCCGGCTTCTCTCCCTGCTaGAAGCTTCGGGCCTGTTCTAATCGGCGGTCTTGCTTGAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: LLGVSSKLVSGFSPC*KLRACSNRRSCLSC Trigger: GCAACTCAAGCAAGACCGCCGATTAGAACAGGCCCGAAGCTTTCAGCAGGGAGAGAAGCCGGAAACTAGTTTGGAGCTCACACCCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS GCA 72 bp | GACCCTGGAAAGGCGGATCCCGAACTCCCCGCTGGCTaGTGGGCTCAGGCCCATCCCGCTGGGGCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: DPGKADPELPAG*WAQAHPAGASR Trigger: CCTGCTGGCCCCAGCGGGATGGGCCTGAGCCCAGCAGCCAGCGGGGAGTTCGGGATCCGCCTTTCCAGGGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239394.2 |
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| CDS CCA 72 bp | ATGGGACCCTGGAAAGGCGGATCCCGAACTCCCCGCTaGCTGCTGGGCTCAGGCCCATCCCGCTGGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: MGPWKGGSRTPR*LLGSGPSRWGQ Trigger: CTGGCCCCAGCGGGATGGGCCTGAGCCCAGCAGCCAGCGGGGAGTTCGGGATCCGCCTTTCCAGGGTCCCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239394.2 |
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| CDS CCA 72 bp | TCTTCGAGATCTGCGTGGGGCGTGGCCATGGGACCCTaGAAAGGCGGATCCCGAACTCCCCGCTGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSRSAWGVAMGP*KGGSRTPRWLL Trigger: CAGCAGCCAGCGGGGAGTTCGGGATCCGCCTTTCCAGGGTCCCATGGCCACGCCCCACGCAGATCTCGAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS GCA 72 bp | GTGTCACTTGACTCTGTACTTGAGGTCTTCGAGATCTaGGTGGGGCGTGGCCATGGGACCCTGGAAAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: VSLDSVLEVFEI*VGRGHGTLERR Trigger: CCGCCTTTCCAGGGTCCCATGGCCACGCCCCACGCAGATCTCGAAGACCTCAAGTACAGAGTCAAGTGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CCA 72 bp | CACTTGACTCTGTACTTGAGGTCTTCGAGATCTGCGTaGGGCGTGGCCATGGGACCCTGGAAAGGCGGATCC | + |
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Preference number: 6 (lower is better) Translates to: HLTLYLRSSRSA*GVAMGPWKGGS Trigger: GGATCCGCCTTTCCAGGGTCCCATGGCCACGCCCCACGCAGATCTCGAAGACCTCAAGTACAGAGTCAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CAA 90 bp | ATCTTGTCCACCGGCAGCGGCAGGTATGTGCCATCCAGCTTGTTGTaGATCTTCCAGGAGCAACCGTGCAGCACATCCTCCAGCCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ILSTGSGRYVPSSLL*IFQEQPCSTSSSRL Trigger: CAGCCGGCTGGAGGATGTGCTGCACGGTTGCTCCTGGAAGATCAACAACAAGCTGGATGGCACATACCTGCCGCTGCCGGTGGACAAGAT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CAA 90 bp | CCGTGCAGCACATCCTCCAGCCGGCTGTACTTCACCACAGCTCGGTaGCTGAAGATAGAGGTGATGCTCCCTGCCTCAAACTCACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PCSTSSSRLYFTTAR*LKIEVMLPASNSLG Trigger: CCCAAGTGAGTTTGAGGCAGGGAGCATCACCTCTATCTTCAGCAACCGAGCTGTGGTGAAGTACAGCCGGCTGGAGGATGTGCTGCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CAA 90 bp | ATGATCTTGTCCACCGGCAGCGGCAGGTATGTGCCATCCAGCTTGTaGTTGATCTTCCAGGAGCAACCGTGCAGCACATCCTCCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: MILSTGSGRYVPSSL*LIFQEQPCSTSSSR Trigger: CCGGCTGGAGGATGTGCTGCACGGTTGCTCCTGGAAGATCAACAACAAGCTGGATGGCACATACCTGCCGCTGCCGGTGGACAAGATCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CAA 72 bp | ACCGGCAGCGGCAGGTATGTGCCATCCAGCTTGTTGTaGATCTTCCAGGAGCAACCGTGCAGCACATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TGSGRYVPSSLL*IFQEQPCSTSS Trigger: GGAGGATGTGCTGCACGGTTGCTCCTGGAAGATCAACAACAAGCTGGATGGCACATACCTGCCGCTGCCGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CAA 72 bp | TCCACCGGCAGCGGCAGGTATGTGCCATCCAGCTTGTaGTTGATCTTCCAGGAGCAACCGTGCAGCACATCC | + |
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Preference number: 6 (lower is better) Translates to: STGSGRYVPSSL*LIFQEQPCSTS Trigger: GGATGTGCTGCACGGTTGCTCCTGGAAGATCAACAACAAGCTGGATGGCACATACCTGCCGCTGCCGGTGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CAA 90 bp | TGCATGATCTTGTCCACCGGCAGCGGCAGGTATGTGCCATCCAGCTaGTTGTTGATCTTCCAGGAGCAACCGTGCAGCACATCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CMILSTGSGRYVPSS*LLIFQEQPCSTSSS Trigger: GCTGGAGGATGTGCTGCACGGTTGCTCCTGGAAGATCAACAACAAGCTGGATGGCACATACCTGCCGCTGCCGGTGGACAAGATCATGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CCA 72 bp | GAAGATAGAGGTGATGCTCCCTGCCTCAAACTCACTTaGGGGAGCCAGGTGGACCACGCAGTCATCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: EDRGDAPCLKLT*GSQVDHAVIFH Trigger: GTGGAAGATGACTGCGTGGTCCACCTGGCTCCCCCAAGTGAGTTTGAGGCAGGGAGCATCACCTCTATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CAA 72 bp | TTGTCCACCGGCAGCGGCAGGTATGTGCCATCCAGCTaGTTGTTGATCTTCCAGGAGCAACCGTGCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: LSTGSGRYVPSS*LLIFQEQPCST Trigger: TGTGCTGCACGGTTGCTCCTGGAAGATCAACAACAAGCTGGATGGCACATACCTGCCGCTGCCGGTGGACAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS TCA 72 bp | CTCTCACCCCTCCTCCCCCTAGCGACACAGTGGGTCTaGAAAGGCAGGACTGAGATATATGCAAGAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LSPLLPLATQWV*KGRTEIYARRQ Trigger: CTGCCTTCTTGCATATATCTCAGTCCTGCCTTTTCAGACCCACTGTGTCGCTAGGGGGAGGAGGGGTGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148558.3 |
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| CDS GCA 72 bp | CCATCCAGCTTGTTGTTGATCTTCCAGGAGCAACCGTaGAGCACATCCTCCAGCCGGCTGTACTTCACCACA | + |
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Preference number: 6 (lower is better) Translates to: PSSLLLIFQEQP*STSSSRLYFTT Trigger: TGTGGTGAAGTACAGCCGGCTGGAGGATGTGCTGCACGGTTGCTCCTGGAAGATCAACAACAAGCTGGATGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CAA 72 bp | ACATCCTCCAGCCGGCTGTACTTCACCACAGCTCGGTaGCTGAAGATAGAGGTGATGCTCCCTGCCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: TSSSRLYFTTAR*LKIEVMLPASN Trigger: GTTTGAGGCAGGGAGCATCACCTCTATCTTCAGCAACCGAGCTGTGGTGAAGTACAGCCGGCTGGAGGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS TCA 72 bp | AGTTATGGGTTTGGGTCTTATGCTATCTACTACTGCTaGGAGGACAGCTCCTGCAGCCTTCGCTCCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SYGFGSYAIYYC*EDSSCSLRSLH Trigger: GTGGAGGGAGCGAAGGCTGCAGGAGCTGTCCTCTCAGCAGTAGTAGATAGCATAAGACCCAAACCCATAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025929.12 ENSMUST00000239394.2 |
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| CDS TCA 72 bp | CCCCCTAGCGACACAGTGGGTCTGAAAAGGCAGGACTaGGATATATGCAAGAAGGCAGAGATAGCTGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: PPSDTVGLKRQD*DICKKAEIAEN Trigger: GTTCTCAGCTATCTCTGCCTTCTTGCATATATCTCAGTCCTGCCTTTTCAGACCCACTGTGTCGCTAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148558.3 |
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| CDS CAA 72 bp | TCGCTGAGTCTGAGTGGGGTACAGTTGACTGTCCAGTaGCAGATTGGGTGTCACTTGACTCTGTACTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SLSLSGVQLTVQ*QIGCHLTLYLR Trigger: CCTCAAGTACAGAGTCAAGTGACACCCAATCTGCAACTGGACAGTCAACTGTACCCCACTCAGACTCAGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CAA 90 bp | CTTTCGATCTCTGAATTTGATGTTGGAATCAGCTCTGTCCTCTTCTaGCTGGGTGTGAGCTCCAAACTAGTTTCCGGCTTCTCTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSISEFDVGISSVLF*LGVSSKLVSGFSPC Trigger: GCAGGGAGAGAAGCCGGAAACTAGTTTGGAGCTCACACCCAGCAAGAAGAGGACAGAGCTGATTCCAACATCAAATTCAGAGATCGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025929.12 ENSMUST00000148558.3 ENSMUST00000239394.2 |
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| CDS CCA 72 bp | AAGGCAGAGATAGCTGAGAACAATAGGAAGAGTTTCTaGGGAGAGTTCTTCATTACTGGAAATGTTCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: KAEIAENNRKSF*GEFFITGNVLR Trigger: CCTTAGAACATTTCCAGTAATGAAGAACTCTCCCCAGAAACTCTTCCTATTGTTCTCAGCTATCTCTGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148558.3 |
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