Pregenerated sensors for PLAAT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060675Ensembl transcript IDs: ENSMUST00000025925.11, ENSMUST00000136465.8, ENSMUST00000136756.2, ENSMUST00000141887.8
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAGACTGTCCCGGTCAGCAAATGTCTCCCCATCTAAGTCACAGTaGCCCAGAGAGGCCAGCAGCCTCTCCCTGGGTGAACCAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: VRLSRSANVSPSKSQ*PREASSLSLGEPRK Trigger: CTTCCTTGGTTCACCCAGGGAGAGGCTGCTGGCCTCTCTGGGCCACTGTGACTTAGATGGGGAGACATTTGCTGACCGGGACAGTCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR TCA 90 bp | ACTCCTCTCAAGTGCCCAACCCTGAAGAGACTTGGTGCACCAGGGTaGAGGGATATCCAGAGAGGGTCCTACCCTCTCAGAAAAGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: TPLKCPTLKRLGAPG*RDIQRGSYPLRKEG Trigger: CCCCTCTTTTCTGAGAGGGTAGGACCCTCTCTGGATATCCCTTCACCCTGGTGCACCAAGTCTCTTCAGGGTTGGGCACTTGAGAGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR GCA 90 bp | GTAGCACTCTGGCTCCAGGTCACAGTTCAGCTCCCAAGTCTGTCCTaGAGCCCTGGTCAATCAGTAGCAGCTTGGTCACGACACAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: VALWLQVTVQLPSLS*SPGQSVAAWSRHSF Trigger: AAAACTGTGTCGTGACCAAGCTGCTACTGATTGACCAGGGCTGCAGGACAGACTTGGGAGCTGAACTGTGACCTGGAGCCAGAGTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR CCA 90 bp | CTGGCTCCAGGTCACAGTTCAGCTCCCAAGTCTGTCCTGCAGCCCTaGTCAATCAGTAGCAGCTTGGTCACGACACAGTTTTGTCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LAPGHSSAPKSVLQP*SISSSLVTTQFCPL Trigger: CAAAGGACAAAACTGTGTCGTGACCAAGCTGCTACTGATTGACCAGGGCTGCAGGACAGACTTGGGAGCTGAACTGTGACCTGGAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR GCA 90 bp | TCTCCCTGGGTGAACCAAGGAAGAAGAGTGAGCTTTGGGAGTCTCTaGTGCTGTAATCCATCGGCTGCTTCATGTTTCGAGTCAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: SPWVNQGRRVSFGSL*CCNPSAASCFESAL Trigger: CAGGGCTGACTCGAAACATGAAGCAGCCGATGGATTACAGCAGCAGAGACTCCCAAAGCTCACTCTTCTTCCTTGGTTCACCCAGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR TCA 90 bp | AGGGATGCAATGATCGTGACCTGTCCTGGGTTCAATCCCCAGCACTaGAAAAGAAGGGAGTCTGACCTGCTGTCTCATCTTCCTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RDAMIVTCPGFNPQH*KRRESDLLSHLPVS Trigger: GGAGACAGGAAGATGAGACAGCAGGTCAGACTCCCTTCTTTTTCAGTGCTGGGGATTGAACCCAGGACAGGTCACGATCATTGCATCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR TCA 90 bp | GCGCATAAGTCGGGAGAAAGCTTTTACAGAGCAACGTTTCAATCCTaGCCAGGGCTCCAACAGACAAGATGTATGTCACGGCGAGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: AHKSGESFYRATFQS*PGLQQTRCMSRRAS Trigger: GCTTGCTCGCCGTGACATACATCTTGTCTGTTGGAGCCCTGGTCAGGATTGAAACGTTGCTCTGTAAAAGCTTTCTCCCGACTTATGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| 3UTR TCA 90 bp | ACTAAACTCGGGTCCACAGAATTGGCAGCAAACAGCTCCACTTTCTaGGCCCTCTCCACGGCCCCAGATTGCTTTTCCTCATTTGACAGT | + |
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Preference number: 1 (lower is better) Translates to: TKLGSTELAANSSTF*ALSTAPDCFSSFDS Trigger: ACTGTCAAATGAGGAAAAGCAATCTGGGGCCGTGGAGAGGGCTCAGAAAGTGGAGCTGTTTGCTGCCAATTCTGTGGACCCGAGTTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR CCA 90 bp | CCTCTGGAGCTGAAGTTACAGATGGTTGTGAAGAACCACGTGTGTTaGGAAACAAAACTCAGGCTCCCTGGAAAAGCAGCCAGTGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: PLELKLQMVVKNHVC*ETKLRLPGKAASAH Trigger: ATGAGCACTGGCTGCTTTTCCAGGGAGCCTGAGTTTTGTTTCCCAACACACGTGGTTCTTCACAACCATCTGTAACTTCAGCTCCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR CCA 90 bp | GAGTCTCAAAGCGCCACGTTGAAACAAGTTCTAGGCCAAGATCCCTaGCTATCTGATGTTTCCATTTCTGTGTACCCAGGCTGTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: ESQSATLKQVLGQDP*LSDVSISVYPGCLL Trigger: AAGGAGACAGCCTGGGTACACAGAAATGGAAACATCAGATAGCCAGGGATCTTGGCCTAGAACTTGTTTCAACGTGGCGCTTTGAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| 3UTR TCA 90 bp | CAAAAGGATGAGTTGGCTGAAATGAATGGCCATAGCCAGAAGCCTTaGGTTCTAGAACTTTGTGATTCCTCATCTACAAAGTGGGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: QKDELAEMNGHSQKP*VLELCDSSSTKWGS Trigger: TGAGCCCCACTTTGTAGATGAGGAATCACAAAGTTCTAGAACTCAAGGCTTCTGGCTATGGCCATTCATTTCAGCCAACTCATCCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR GCA 90 bp | AGTCTTTATCTTAGCAATAGAAACCTGACTAGAACAGAGCTGTACTaGAGAAGGAAATCGGAAGGTTTTAGGATGACACGAGGGATTGAA | + |
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Preference number: 1 (lower is better) Translates to: SLYLSNRNLTRTELY*RRKSEGFRMTRGIE Trigger: TTCAATCCCTCGTGTCATCCTAAAACCTTCCGATTTCCTTCTGCAGTACAGCTCTGTTCTAGTCAGGTTTCTATTGCTAAGATAAAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCACACCTCTGGGTGTTGCTGTGAGGGCCGTCCAGAGAGGATCAACATGGGGGGGGCTCACAGAGCTTaGCTCCAAGGCTCTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RHTSGCCCEGRPERINMGGAHRA*LQGSGA Trigger: TGCTCCAGAGCCTTGGAGGCAAGCTCTGTGAGCCCC...CCCCATGTTGATCCTCTCTGGACGGCCCTCACAGCAACACCCAGAGGTGTGCCT 61% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCACACCTCTGGGTGTTGCTGTGAGGGCCGTCCAGAGAGGATCAACATGGGGGAACGTGGTAGCACTTaGCTGGGTTCCCGGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: RHTSGCCCEGRPERINMGERGST*LGSRHW Trigger: CCAGTGCCGGGAACCCAGGCAAGTGCTACCACGTTC...CCCCATGTTGATCCTCTCTGGACGGCCCTCACAGCAACACCCAGAGGTGTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGTCTCCCCATCTAAGTCACAGTGGCCCAGAGAGGCCAGCAGCCTCTCCAACACGGCACAGGTCTaGAGGCCCAAAAGGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: ANVSPSKSQWPREASSLSNTAQV*RPKRMS Trigger: ACTCATCCTTTTGGGCCTTCAGACCTGTGCCGTGTT...GGAGAGGCTGCTGGCCTCTCTGGGCCACTGTGACTTAGATGGGGAGACATTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCACACCTCTGGGTGTTGCTGTGAGGGCCGTCCAGAGAGGATCAACATGGGGTTCAATCCCCAGCACTaGAAAAGAAGGGAGTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: RHTSGCCCEGRPERINMGFNPQH*KRRESD Trigger: GTCAGACTCCCTTCTTTTTCAGTGCTGGGGATTGAA...CCCCATGTTGATCCTCTCTGGACGGCCCTCACAGCAACACCCAGAGGTGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCACACCTCTGGGTGTTGCTGTGAGGGCCGTCCAGAGAGGATCAACATGGGGGAAGAAAAGAGGCTGTaGACCAGCATTTCCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RHTSGCCCEGRPERINMGEEKRL*TSISLP Trigger: AGGAAGGGAAATGCTGGTGCACAGCCTCTTTTCTTC...CCCCATGTTGATCCTCTCTGGACGGCCCTCACAGCAACACCCAGAGGTGTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTCACCCATGCAACACTGAACGTGGTAGCACTTGCCTGGGTTCCCGGCACGAAGGGAGTCTGACCTaGTGTCTCATCTTCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ISHPCNTERGSTCLGSRHEGSLT*CLIFLS Trigger: AGACAGGAAGATGAGACAGCAGGTCAGACTCCCTTC...GTGCCGGGAACCCAGGCAAGTGCTACCACGTTCAGTGTTGCATGGGTGAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTCACCCATGCAACACTGAACGTGGTAGCACTTGCCTGGGTTCCCGGCACAAAAAGAAGGGAGTCTaGCCTGCTGTCTCATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: ISHPCNTERGSTCLGSRHKKKGV*PAVSSS Trigger: GGAAGATGAGACAGCAGGTCAGACTCCCTTCTTTTT...GTGCCGGGAACCCAGGCAAGTGCTACCACGTTCAGTGTTGCATGGGTGAGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR TCA 90 bp | AGTATGCCACCACCGTTATTGCAGTCACCCAGGAACCAGGAACTAATGACATTCGCAAGAAGACCAGCCTaGGCTACCCAGAGACCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SMPPPLLQSPRNQELMTFARRPA*ATQRPC Trigger: ACAGGGTCTCTGGGTAGCTCAGGCTGGTCTTCTTGC...GAATGTCATTAGTTCCTGGTTCCTGGGTGACTGCAATAACGGTGGTGGCATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCATGTTTCGAGTCAGCCCTGTGAGGATGCTAAGGATACTCCTCTCAAGTCTTGGTGCACCAGGGTaGAGGGATATCCAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: CFMFRVSPVRMLRILLSSLGAPG*RDIQRG Trigger: CCCTCTCTGGATATCCCTTCACCCTGGTGCACCAAG...ACTTGAGAGGAGTATCCTTAGCATCCTCACAGGGCTGACTCGAAACATGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGCTCCCTGGAAAAGCAGCCAGTGCTCATAACCACTAAGCCATCTTTCCAGAAAGCACTCTATCACTaGGCTAAAGCCCCAACACTC | + |
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Preference number: 2 (lower is better) Translates to: SGSLEKQPVLITTKPSFQKALYH*AKAPTL Trigger: GAGTGTTGGGGCTTTAGCTCAGTGATAGAGTGCTTT...CTGGAAAGATGGCTTAGTGGTTATGAGCACTGGCTGCTTTTCCAGGGAGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR-3UTR TCA 90 bp | AGGAGACAACTTTTGGGAGTTGGCTTGTTCCTTCCACTGTGTGCATCCCATGGATGCCTTGAGTTCCTTTaGGCGTCTCTCAATGGACTG | + |
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Preference number: 2 (lower is better) Translates to: RRQLLGVGLFLPLCASHGCLEFL*ASLNGL Trigger: CAGTCCATTGAGAGACGCTCAAAGGAACTCAAGGCA...TCCATGGGATGCACACAGTGGAAGGAACAAGCCAACTCCCAAAAGTTGTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR-3UTR TCA 90 bp | ATTCAACTAATGGAGGGCAGAAACCAGATGCTGCCCACTGGAAGATACCTAATGAGTGTCAGAGGAAGGTaGGACTGTCCCGGTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: IQLMEGRNQMLPTGRYLMSVRGR*DCPGQQ Trigger: TTGCTGACCGGGACAGTCTCACCTTCCTCTGACACT...CATTAGGTATCTTCCAGTGGGCAGCATCTGGTTTCTGCCCTCCATTAGTTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR GCA 90 bp | GCGAGCAAGCCAATAAGCAGCACCCATCATGGTTTCTGCTTCGGTTCCTGCCTTAGAACAGAGCTGTACTaGAGAAGGAAATCGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: ASKPISSTHHGFCFGSCLRTELY*RRKSEG Trigger: ACCTTCCGATTTCCTTCTGCAGTACAGCTCTGTTCT...AAGGCAGGAACCGAAGCAGAAACCATGATGGGTGCTGCTTATTGGCTTGCTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGCTCCCTGGAAAAGCAGCCAGTGCTCATAACCACTAAGCCATCTTTCCAGGTTCCTTCCACTGTGTaGATCCCATGGACTAAACTC | + |
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Preference number: 2 (lower is better) Translates to: SGSLEKQPVLITTKPSFQVPSTV*IPWTKL Trigger: GAGTTTAGTCCATGGGATGCACACAGTGGAAGGAAC...CTGGAAAGATGGCTTAGTGGTTATGAGCACTGGCTGCTTTTCCAGGGAGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR-3UTR GCA 90 bp | TCCATTGTTATCATGCCCAAAGCATGGCAGCATACAGGCAGACATGGTGCTGAACTCCCAAGTCTGTCCTaGAGCCCTGGTCAATCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SIVIMPKAWQHTGRHGAELPSLS*SPGQSV Trigger: TACTGATTGACCAGGGCTGCAGGACAGACTTGGGAG...TTCAGCACCATGTCTGCCTGTATGCTGCCATGCTTTGGGCATGATAACAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR-3UTR GCA 90 bp | AGTATGCCACCACCGTTATTGCAGTCACCCAGGAACCAGGAACTAATGACATTCTCTCAGATCCCTGTCTaGTTCCTTCCTCAGAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SMPPPLLQSPRNQELMTFSQIPV*FLPQSG Trigger: GCCACTCTGAGGAAGGAAGCAGACAGGGATCTGAGA...GAATGTCATTAGTTCCTGGTTCCTGGGTGACTGCAATAACGGTGGTGGCATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGACAACTTTTGGGAGTTGGCTTGTTCCTTCCACTGTGTGCATCCCATGGATTGAGCGTCTCTCAATaGACTGTGGCCAGGGATATG | + |
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Preference number: 2 (lower is better) Translates to: RRQLLGVGLFLPLCASHGLSVSQ*TVARDM Trigger: CATATCCCTGGCCACAGTCCATTGAGAGACGCTCAA...TCCATGGGATGCACACAGTGGAAGGAACAAGCCAACTCCCAAAAGTTGTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR-3UTR CCA 90 bp | ATTCAACTAATGGAGGGCAGAAACCAGATGCTGCCCACTGGAAGATACCTAATGCCAGCAGCCTCTCCCTaGGTGAACCAAGGAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: IQLMEGRNQMLPTGRYLMPAASP*VNQGRR Trigger: TCTTCTTCCTTGGTTCACCCAGGGAGAGGCTGCTGG...CATTAGGTATCTTCCAGTGGGCAGCATCTGGTTTCTGCCCTCCATTAGTTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAAAAGTATGCCACCACCGTTATTGCAGTCACCCAGGAACCAGGAACTAATGCCATCTAAGTCACAGTaGCCCAGAGAGGCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: IKSMPPPLLQSPRNQELMPSKSQ*PREASS Trigger: GCTGCTGGCCTCTCTGGGCCACTGTGACTTAGATGG...CATTAGTTCCTGGTTCCTGGGTGACTGCAATAACGGTGGTGGCATACTTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGCATGCTCGCCAGGAAAGCACTCTATCACTGAGCTAAAGCCCCAACACTCCAGATCCCTGGCTATCTaGTGTTTCCATTTCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: TACSPGKHSITELKPQHSRSLAI*CFHFCV Trigger: TACACAGAAATGGAAACATCAGATAGCCAGGGATCT...GGAGTGTTGGGGCTTTAGCTCAGTGATAGAGTGCTTTCCTGGCGAGCATGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGAAGAGACTTGGTGCACCAGGGTGAAGGGATATCCAGAGAGGGTCCTACCCAGTTCTAGAACTTTGTaGTTCCTCATCTACAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PEETWCTRVKGYPERVLPSSRTL*FLIYKV Trigger: CACTTTGTAGATGAGGAATCACAAAGTTCTAGAACT...GGGTAGGACCCTCTCTGGATATCCCTTCACCCTGGTGCACCAAGTCTCTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCAGGAGACAACTTTTGGGAGTTGGCTTGTTCCTTCCACTGTGTGCATCCCAAGAACAGAGCTGTACTaGAGAAGGAAATCGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: GQETTFGSWLVPSTVCIPRTELY*RRKSEG Trigger: ACCTTCCGATTTCCTTCTGCAGTACAGCTCTGTTCT...TGGGATGCACACAGTGGAAGGAACAAGCCAACTCCCAAAAGTTGTCTCCTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGAACCAGGAACTAATGACATTCGTCTCAGATCCCTGTCTGCTTCCTTCCCATAGCCAGAAGCCTTaGGTTCTAGAACTTTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: PRNQELMTFVSDPCLLPSHSQKP*VLELCD Trigger: ATCACAAAGTTCTAGAACTCAAGGCTTCTGGCTATG...GGAAGGAAGCAGACAGGGATCTGAGACGAATGTCATTAGTTCCTGGTTCCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAAAAGAGGAAGAAAAGAGGCTGTGCACCAGCATTTCCCTTCCTCCACTTCCATCAAACCACTTCTCTaGCTCTCACCAACACAGCTA | + |
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Preference number: 2 (lower is better) Translates to: EKRGRKEAVHQHFPSSTSIKPLL*LSPTQL Trigger: TAGCTGTGTTGGTGAGAGGCAGAGAAGTGGTTTGAT...GGAAGTGGAGGAAGGGAAATGCTGGTGCACAGCCTCTTTTCTTCCTCTTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAACCTGAGCCAAAGAAAACTATTCTCTCAGTGCTGGAACTCAGCGAGCACTCTCTCAATGGACTGTaGCCAGGGATATGTAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KEPEPKKTILSVLELSEHSLNGL*PGICKP Trigger: TGGCTTACATATCCCTGGCCACAGTCCATTGAGAGA...GTGCTCGCTGAGTTCCAGCACTGAGAGAATAGTTTTCTTTGGCTCAGGTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATTGTTATCATGCCCAAAGCATGGCAGCATACAGGCAGACATGGTGCTGAACTGTGTGTGCAGTGCTaGTGGAGGGTAGAAAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SIVIMPKAWQHTGRHGAELCVQC*WRVEKV Trigger: AACTTTTTCTACCCTCCACCAGCACTGCACACACAG...TTCAGCACCATGTCTGCCTGTATGCTGCCATGCTTTGGGCATGATAACAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCATGTTTCGAGTCAGCCCTGTGAGGATGCTAAGGATACTCCTCTCAAGTTTAATCTCTCACCCATaGAACACTGAACGTGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: CFMFRVSPVRMLRILLSSLISHP*NTERGS Trigger: GCTACCACGTTCAGTGTTGCATGGGTGAGAGATTAA...ACTTGAGAGGAGTATCCTTAGCATCCTCACAGGGCTGACTCGAAACATGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGGAAAAGCAGCCAGTGCTCATAACCACTAAGCCATCTTTCCAGCCTCAAACTGTCCCTAAATCCTaGTTGGTGGAAAATGTAACT | + |
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Preference number: 2 (lower is better) Translates to: SLEKQPVLITTKPSFQPQTVPKS*LVENVT Trigger: AGTTACATTTTCCACCAATCAGGATTTAGGGACAGT...TTGAGGCTGGAAAGATGGCTTAGTGGTTATGAGCACTGGCTGCTTTTCCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR-3UTR TCA 90 bp | AAGGAACCTGAGCCAAAGAAAACTATTCTCTCAGTGCTGGAACTCAGCGAGCACTTAGCAATAGAAACCTaGCTAGAACAGAGCTGTACT | + |
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Preference number: 2 (lower is better) Translates to: KEPEPKKTILSVLELSEHLAIET*LEQSCT Trigger: AGTACAGCTCTGTTCTAGTCAGGTTTCTATTGCTAA...GTGCTCGCTGAGTTCCAGCACTGAGAGAATAGTTTTCTTTGGCTCAGGTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGTCCTTCTCACACCACTGAATATCCATAAACTCCAGCGCCTGAGTCTCAAACTAGGCCAAGATCCCTaGCTATCTGATGTTTCCATT | + |
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Preference number: 2 (lower is better) Translates to: FVLLTPLNIHKLQRLSLKLGQDP*LSDVSI Trigger: AATGGAAACATCAGATAGCCAGGGATCTTGGCCTAG...TTTGAGACTCAGGCGCTGGAGTTTATGGATATTCAGTGGTGTGAGAAGGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| 3UTR-3UTR CCA 90 bp | TATTATCTAAATATTATGAATATTGTGTGGGAGGGTGAGCATCGGGACACCTGCTCTCTCAATGGACTGTaGCCAGGGATATGTAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: YYLNIMNIVWEGEHRDTCSLNGL*PGICKP Trigger: TGGCTTACATATCCCTGGCCACAGTCCATTGAGAGA...GCAGGTGTCCCGATGCTCACCCTCCCACACAATATTCATAATATTTAGATAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCACCAATATTATGGTACATAAGTGGAGGTCAGGAGACAACTTTTGGGAGTTGGACTCTGTTTTCTaGAATACAAAGGGTACCACA | + |
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Preference number: 2 (lower is better) Translates to: MCTNIMVHKWRSGDNFWELDSVF*NTKGTT Trigger: TGTGGTACCCTTTGTATTGCAGAAAACAGAGTCCAA...CTCCCAAAAGTTGTCTCCTGACCTCCACTTATGTACCATAATATTGGTGCACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| 3UTR TCA 72 bp | GAGGCTGTGCACCAGCATTTCCCTTCCTCCACTTCCTaGCCCGCACTACCCCGGCAAGAACCTCCCACCACC | + |
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Preference number: 3 (lower is better) Translates to: EAVHQHFPSSTS*PALPRQEPPTT Trigger: GGTGGTGGGAGGTTCTTGCCGGGGTAGTGCGGGTCAGGAAGTGGAGGAAGGGAAATGCTGGTGCACAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR TCA 72 bp | GGCAAGAACCTCCCACCACCACACCTTCTCCCACGGTaGGGACTGGTTGCTGCCAGTCATCAGCCAAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: GKNLPPPHLLPR*GLVAASHQPKQ Trigger: TTGTTTTGGCTGATGACTGGCAGCAACCAGTCCTCACCGTGGGAGAAGGTGTGGTGGTGGGAGGTTCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR GCA 72 bp | CCCACCACCACACCTTCTCCCACGGTGAGGACTGGTTaGTGCCAGTCATCAGCCAAAACAAACTTCCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PTTTPSPTVRTG*CQSSAKTNFPP Trigger: AGGAGGGAAGTTTGTTTTGGCTGATGACTGGCAGCAACCAGTCCTCACCGTGGGAGAAGGTGTGGTGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR GCA 72 bp | ATGCCTAAAGCACTCATGAGGCACACCTCTGGGTGTTaGTGTGAGGGCCGTCCAGAGAGGATCAACATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: MPKALMRHTSGC*CEGRPERINMG Trigger: CCCCATGTTGATCCTCTCTGGACGGCCCTCACAGCAACACCCAGAGGTGTGCCTCATGAGTGCTTTAGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR TCA 72 bp | AAGTGCCCAACCCTGAAGAGACTTGGTGCACCAGGGTaGAGGGATATCCAGAGAGGGTCCTACCCTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KCPTLKRLGAPG*RDIQRGSYPLR Trigger: TCTGAGAGGGTAGGACCCTCTCTGGATATCCCTTCACCCTGGTGCACCAAGTCTCTTCAGGGTTGGGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR CCA 72 bp | GGATACTCCTCTCAAGTGCCCAACCCTGAAGAGACTTaGTGCACCAGGGTGAAGGGATATCCAGAGAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GYSSQVPNPEET*CTRVKGYPERV Trigger: GACCCTCTCTGGATATCCCTTCACCCTGGTGCACCAAGTCTCTTCAGGGTTGGGCACTTGAGAGGAGTATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTGTGCAGTGCTGGTGGAGGGTAGAAAAAGTTGCTGGATCCTCTGGAGCTCTAGGTCCTTTGGGTTaGGGGACCTTGAGCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LCVQCWWRVEKVAGSSGALGPLG*GTLSTD Trigger: GTCAGTGCTCAAGGTCCCCAAACCCAAAGGACCTAG...AGCTCCAGAGGATCCAGCAACTTTTTCTACCCTCCACCAGCACTGCACACACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR TCA 72 bp | CAGCACCCATCATGGTTTCTGCTTCGGTTCCTGCCTTaGGTTCCTTTGAGCGTCTCTCAATGGACTGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QHPSWFLLRFLP*VPLSVSQWTVA Trigger: GGCCACAGTCCATTGAGAGACGCTCAAAGGAACTCAAGGCAGGAACCGAAGCAGAAACCATGATGGGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR GCA 72 bp | GTGATTCCTCATCTACAAAGTGGGGCTCACAGAGCTTaGCTCCAAGGCTCTGGAGCATCATCACAGGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: VIPHLQSGAHRA*LQGSGASSQGC Trigger: GCATCCCTGTGATGATGCTCCAGAGCCTTGGAGGCAAGCTCTGTGAGCCCCACTTTGTAGATGAGGAATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR GCA 72 bp | TACTCCTCTCAAGTGCCCAACCCTGAAGAGACTTGGTaGACCAGGGTGAAGGGATATCCAGAGAGGGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: YSSQVPNPEETW*TRVKGYPERVL Trigger: TAGGACCCTCTCTGGATATCCCTTCACCCTGGTGCACCAAGTCTCTTCAGGGTTGGGCACTTGAGAGGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCATGCTCGCCAGGAAAGCACTCTATCACTGAGCTAAAGCCCCAACACTCCCCCAGGCTGTCTCCTTaGGCATACCATAGTATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TACSPGKHSITELKPQHSPRLSP*AYHSIW Trigger: CCAGATACTATGGTATGCCAAAGGAGACAGCCTGGG...GGAGTGTTGGGGCTTTAGCTCAGTGATAGAGTGCTTTCCTGGCGAGCATGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR TCA 72 bp | CCAGAGAGGATCAACATGGGGAGACTGCCCTGGATGTaGACAGCACCACTGCATTCGCTGAGAAAAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PERINMGRLPWM*TAPLHSLRKEE Trigger: TTCCTCTTTTCTCAGCGAATGCAGTGGTGCTGTTCACATCCAGGGCAGTCTCCCCATGTTGATCCTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR GCA 72 bp | AAGTTCCCAAGACCTCCCTGGGTACTGGGTACTGGGTaGCTGTCATCCTGTTTGGCAGAGAGAGATACACAT | + |
|
Preference number: 3 (lower is better) Translates to: KFPRPPWVLGTG*LSSCLAERDTH Trigger: ATGTGTATCTCTCTCTGCCAAACAGGATGACAGGCACCCAGTACCCAGTACCCAGGGAGGTCTTGGGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR CCA 72 bp | GGGAGTTGGCTTGTTCCTTCCACTGTGTGCATCCCATaGACTAAACTCGGGTCCACAGAATTGGCAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GSWLVPSTVCIP*TKLGSTELAAN Trigger: GTTTGCTGCCAATTCTGTGGACCCGAGTTTAGTCCATGGGATGCACACAGTGGAAGGAACAAGCCAACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR CCA 72 bp | CTTTGCCTGCACGTATGTCTGTGTGTGCAGTGCTGGTaGAGGGTAGAAAAAGTTGCTGGATCCTCTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LCLHVCLCVQCW*RVEKVAGSSGA Trigger: AGCTCCAGAGGATCCAGCAACTTTTTCTACCCTCCACCAGCACTGCACACACAGACATACGTGCAGGCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR CCA 72 bp | GTGCTTTGCCTGCACGTATGTCTGTGTGTGCAGTGCTaGTGGAGGGTAGAAAAAGTTGCTGGATCCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLCLHVCLCVQC*WRVEKVAGSSG Trigger: TCCAGAGGATCCAGCAACTTTTTCTACCCTCCACCAGCACTGCACACACAGACATACGTGCAGGCAAAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR TCA 72 bp | CATGGTTTCTGCTTCGGTTCCTGCCTTGAGTTCCTTTaGGCGTCTCTCAATGGACTGTGGCCAGGGATATGT | + |
|
Preference number: 3 (lower is better) Translates to: HGFCFGSCLEFL*ASLNGLWPGIC Trigger: ACATATCCCTGGCCACAGTCCATTGAGAGACGCTCAAAGGAACTCAAGGCAGGAACCGAAGCAGAAACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR TCA 72 bp | AGGTCTAGGTCCTTTGGGTTTGGGGACCTTGAGCACTaGCGTGAAGCCCTAAGGAACCTGAGCCAAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSRSFGFGDLEH*REALRNLSQRK Trigger: TTTTCTTTGGCTCAGGTTCCTTAGGGCTTCACGTCAGTGCTCAAGGTCCCCAAACCCAAAGGACCTAGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR TCA 72 bp | CATGGTGCTGAAGAGATAGCTGAGAGCTCTACATCTTaGTCCATAGGCAGCAGGAAGAGAGCAACACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HGAEEIAESSTS*SIGSRKRATLG Trigger: GCCCAGTGTTGCTCTCTTCCTGCTGCCTATGGATCAAGATGTAGAGCTCTCAGCTATCTCTTCAGCACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR CCA 72 bp | TTCGTCTCAGATCCCTGTCTGCTTCCTTCCTCAGAGTaGCTGTTCTATGTCACTAAAGCCAGACTGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FVSDPCLLPSSE*LFYVTKARLWL Trigger: GAGCCACAGTCTGGCTTTAGTGACATAGAACAGCCACTCTGAGGAAGGAAGCAGACAGGGATCTGAGACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR TCA 72 bp | ATGATCGTGACCTGTCCTGGGTTCAATCCCCAGCACTaGAAAAGAAGGGAGTCTGACCTGCTGTCTCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: MIVTCPGFNPQH*KRRESDLLSHL Trigger: AAGATGAGACAGCAGGTCAGACTCCCTTCTTTTTCAGTGCTGGGGATTGAACCCAGGACAGGTCACGATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR CCA 72 bp | AGCGCCACGTTGAAACAAGTTCTAGGCCAAGATCCCTaGCTATCTGATGTTTCCATTTCTGTGTACCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SATLKQVLGQDP*LSDVSISVYPG Trigger: GCCTGGGTACACAGAAATGGAAACATCAGATAGCCAGGGATCTTGGCCTAGAACTTGTTTCAACGTGGCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTATGCCACCACCGTTATTGCAGTCACCCAGGAACCAGGAACTAATGACATTCAGAAGGGAGTCCCTGTaGTCCATCACCACATTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SMPPPLLQSPRNQELMTFRRESL*SITTLV Trigger: GACTAATGTGGTGATGGACAACAGGGACTCCCTTCT...GAATGTCATTAGTTCCTGGTTCCTGGGTGACTGCAATAACGGTGGTGGCATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR TCA 72 bp | TCGGGAGAAAGCTTTTACAGAGCAACGTTTCAATCCTaGCCAGGGCTCCAACAGACAAGATGTATGTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: SGESFYRATFQS*PGLQQTRCMSR Trigger: CCGTGACATACATCTTGTCTGTTGGAGCCCTGGTCAGGATTGAAACGTTGCTCTGTAAAAGCTTTCTCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR CCA 72 bp | TACATAAGTGGAGGTCAGGAGACAACTTTTGGGAGTTaGCTTGTTCCTTCCACTGTGTGCATCCCATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: YISGGQETTFGS*LVPSTVCIPWT Trigger: AGTCCATGGGATGCACACAGTGGAAGGAACAAGCCAACTCCCAAAAGTTGTCTCCTGACCTCCACTTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR CCA 72 bp | CTGAAGTTACAGATGGTTGTGAAGAACCACGTGTGTTaGGAAACAAAACTCAGGCTCCCTGGAAAAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LKLQMVVKNHVC*ETKLRLPGKAA Trigger: GGCTGCTTTTCCAGGGAGCCTGAGTTTTGTTTCCCAACACACGTGGTTCTTCACAACCATCTGTAACTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAGAATACTCCTCTCTAGTTCACATGAAATCCTCCAAAATCAGTTCTCATTGGGGCTCACAGAGCTaGCCTCCAAGGCTCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RKEYSSLVHMKSSKISSHWGSQS*PPRLWS Trigger: GCTCCAGAGCCTTGGAGGCAAGCTCTGTGAGCCCCA...ATGAGAACTGATTTTGGAGGATTTCATGTGAACTAGAGAGGAGTATTCTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTGTGCAGTGCTGGTGGAGGGTAGAAAAAGTTGCTGGATCCTCTGGAGCTGACTACAATGGTAAATaGTCAATTTACTGGCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCVQCWWRVEKVAGSSGADYNGK*SIYWPR Trigger: TCTTGGCCAGTAAATTGACAATTTACCATTGTAGTC...AGCTCCAGAGGATCCAGCAACTTTTTCTACCCTCCACCAGCACTGCACACACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR TCA 72 bp | GTTGAAACAAGTTCTAGGCCAAGATCCCTGGCTATCTaGTGTTTCCATTTCTGTGTACCCAGGCTGTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VETSSRPRSLAI*CFHFCVPRLSP Trigger: AGGAGACAGCCTGGGTACACAGAAATGGAAACATCAGATAGCCAGGGATCTTGGCCTAGAACTTGTTTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR GCA 72 bp | TCAGTGCTGGAACTCAGCGAGCACATGTGTATTCTGTaGAAGATGCGCATAAGTCGGGAGAAAGCTTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: SVLELSEHMCIL*KMRISREKAFT Trigger: TGTAAAAGCTTTCTCCCGACTTATGCGCATCTTGCACAGAATACACATGTGCTCGCTGAGTTCCAGCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR CCA 72 bp | ATTATGGTACATAAGTGGAGGTCAGGAGACAACTTTTaGGAGTTGGCTTGTTCCTTCCACTGTGTGCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: IMVHKWRSGDNF*ELACSFHCVHP Trigger: GGGATGCACACAGTGGAAGGAACAAGCCAACTCCCAAAAGTTGTCTCCTGACCTCCACTTATGTACCATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR CCA 72 bp | AGGAGTCAAATAAAATTTAAGTTCCCAAGACCTCCCTaGGTACTGGGTACTGGGTGCCTGTCATCCTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RSQIKFKFPRPP*VLGTGCLSSCL Trigger: CAAACAGGATGACAGGCACCCAGTACCCAGTACCCAGGGAGGTCTTGGGAACTTAAATTTTATTTGACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR GCA 72 bp | GCTTCACTTGAGATAACAGTGTTGGACTCTGTTTTCTaGAATACAAAGGGTACCACAGCAAACAGAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ASLEITVLDSVF*NTKGTTANRKA Trigger: GGCCTTTCTGTTTGCTGTGGTACCCTTTGTATTGCAGAAAACAGAGTCCAACACTGTTATCTCAAGTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR GCA 72 bp | CTTAGCAATAGAAACCTGACTAGAACAGAGCTGTACTaGAGAAGGAAATCGGAAGGTTTTAGGATGACACGA | + |
|
Preference number: 3 (lower is better) Translates to: LSNRNLTRTELY*RRKSEGFRMTR Trigger: TCGTGTCATCCTAAAACCTTCCGATTTCCTTCTGCAGTACAGCTCTGTTCTAGTCAGGTTTCTATTGCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR TCA 72 bp | CAGGGCCTTGAGCCTTGTGCAAATAGACAGACTTTCTaGGTACTCATTTTCTACCTTTTGTTTGCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QGLEPCANRQTF*VLIFYLLFALV Trigger: AACCAAAGCAAACAAAAGGTAGAAAATGAGTACTCAGAAAGTCTGTCTATTTGCACAAGGCTCAAGGCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAGAATACTCCTCTCTAGTTCACATGAAATCCTCCAAAATCAGTTCTCATGCCCAAAAGGATGAGTaGGCTGAAATGAATGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RKEYSSLVHMKSSKISSHAQKDE*AEMNGH Trigger: ATGGCCATTCATTTCAGCCAACTCATCCTTTTGGGC...ATGAGAACTGATTTTGGAGGATTTCATGTGAACTAGAGAGGAGTATTCTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR TCA 72 bp | ATATTATCTAAATATTATGAATATTGTGTGGGAGGGTaGGCATCGGGACACCTGCCCTTTGAACTTAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ILSKYYEYCVGG*ASGHLPFELRS Trigger: AGACCTAAGTTCAAAGGGCAGGTGTCCCGATGCTCACCCTCCCACACAATATTCATAATATTTAGATAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR TCA 72 bp | TACAGGAAAACATTTAATTGGGGCTGGCTTACAGTTTaGAGGTCTAGTCCATTGTTATCATGCCCAAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YRKTFNWGWLTV*RSSPLLSCPKH Trigger: ATGCTTTGGGCATGATAACAATGGACTAGACCTTCAAACTGTAAGCCAGCCCCAATTAAATGTTTTCCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| 3UTR GCA 72 bp | TATAGTGCTTACTTATGTATTGCATGCAGATATATGTaGACCAATATTATGGTACATAAGTGGAGGTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YSAYLCIACRYM*TNIMVHKWRSG Trigger: TCCTGACCTCCACTTATGTACCATAATATTGGTGCACATATATCTGCATGCAATACATAAGTAAGCACTATA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| CDS-3UTR TCA 90 bp | GCCAGCCAGGAAAGACTGTTATCCAGAACAGAGCCCCGAGCTTCCCTCCAGAGATGTTTCTGGAGAGCATaGCTCCAACGAGGCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASQERLLSRTEPRASLQRCFWRA*LQRGPR Trigger: CCTTGGGCCTCGTTGGAGTCATGCTCTCCAGAAACA...TCTCTGGAGGGAAGCTCGGGGCTCTGTTCTGGATAACAGTCTTTCCTGGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | GCAAATGTCTCCCCATCTAAGTCACAGTGGCCCAGAGAGGCCAGCAGCCTCTCCTCAGGTCTCCAGGCTTaGGTTCTGGTATGGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ANVSPSKSQWPREASSLSSGLQA*VLVWVL Trigger: TAGCACCCATACCAGAACCCAAGCCTGGAGACCTGA...GGAGAGGCTGCTGGCCTCTCTGGGCCACTGTGACTTAGATGGGGAGACATTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCAGGAAAGACTGTTATCCAGAACAGAGCCCCGAGCTTCCCTCCAGAGACTTGCTCAGAGGCAGTaGGGTGTACTCCTCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASQERLLSRTEPRASLQRLAQRQ*GVLLVM Trigger: CATGACGAGGAGTACACCCCACTGCCTCTGAGCAAG...TCTCTGGAGGGAAGCTCGGGGCTCTGTTCTGGATAACAGTCTTTCCTGGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAAGAGACTTGGTGCACCAGGGTGAAGGGATATCCAGAGAGGGTCCTACCCCTTGGAGGAGCCAGGTaGATCACGTATCCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PEETWCTRVKGYPERVLPLGGAR*ITYPSP Trigger: TGGTGATGGATACGTGATCCACCTGGCTCCTCCAAG...GGGTAGGACCCTCTCTGGATATCCCTTCACCCTGGTGCACCAAGTCTCTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR CAA 72 bp | ATTGTGTGGGAGGGTGAGCATCGGGACACCTGCCCTTaGAACTTAGGTCTAGGTCCTTTGGGTTTGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: IVWEGEHRDTCP*NLGLGPLGLGT Trigger: GGTCCCCAAACCCAAAGGACCTAGACCTAAGTTCAAAGGGCAGGTGTCCCGATGCTCACCCTCCCACACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCCAATAAGCAGCACCCATCATGGTTTCTGCTTCGGTTCCTGCCTTGAGCAGTCAAAGCAGACATaGTGCTGGCTGCCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKPISSTHHGFCFGSCLEQSKQT*CWLPQL Trigger: GAGCTGGGGCAGCCAGCATCATGTCTGCTTTGACTG...CTCAAGGCAGGAACCGAAGCAGAAACCATGATGGGTGCTGCTTATTGGCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGTCTCCCCATCTAAGTCACAGTGGCCCAGAGAGGCCAGCAGCCTCTCCCGTTGGGAAAATGACCTaGCACCTAAGGTCAAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QMSPHLSHSGPERPAASPVGKMT*HLRSRY Trigger: GTACCTTGACCTTAGGTGTCAGGTCATTTTCCCAAC...GGGAGAGGCTGCTGGCCTCTCTGGGCCACTGTGACTTAGATGGGGAGACATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR CAA 72 bp | GCAGCACCCATCATGGTTTCTGCTTCGGTTCCTGCCTaGAGTTCCTTTGAGCGTCTCTCAATGGACTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAPIMVSASVPA*SSFERLSMDCG Trigger: GCCACAGTCCATTGAGAGACGCTCAAAGGAACTCAAGGCAGGAACCGAAGCAGAAACCATGATGGGTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCCAATAAGCAGCACCCATCATGGTTTCTGCTTCGGTTCCTGCCTTGAGTGTTTCTGGAGAGCATaGCTCCAACGAGGCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPISSTHHGFCFGSCLECFWRA*LQRGPR Trigger: CCTTGGGCCTCGTTGGAGTCATGCTCTCCAGAAACA...CTCAAGGCAGGAACCGAAGCAGAAACCATGATGGGTGCTGCTTATTGGCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGGGTACCACAGCAAACAGAAAGGCCAGCCAGGAAAGACTGTTATCCAGAAGGCTGCCCCAGCTCCTaGGATTTCACTTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRVPQQTERPARKDCYPEGCPSS*DFTWRS Trigger: GCTCCTCCAAGTGAAATCGCAGGAGCTGGGGCAGCC...TTCTGGATAACAGTCTTTCCTGGCTGGCCTTTCTGTTTGCTGTGGTACCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTCATGTTTCGAGTCAGCCCTGTGAGGATGCTAAGGATACTCCTCTCAAGTGGCTGCCCCAGCTCCTaGGATTTCACTTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CFMFRVSPVRMLRILLSSGCPSS*DFTWRS Trigger: GCTCCTCCAAGTGAAATCGCAGGAGCTGGGGCAGCC...ACTTGAGAGGAGTATCCTTAGCATCCTCACAGGGCTGACTCGAAACATGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCATGCTCGCCAGGAAAGCACTCTATCACTGAGCTAAAGCCCCAACACTCCTCCTGCGATTTCACTTaGAGGAGCCAGGTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TACSPGKHSITELKPQHSSCDFT*RSQVDH Trigger: GTGATCCACCTGGCTCCTCCAAGTGAAATCGCAGGA...GGAGTGTTGGGGCTTTAGCTCAGTGATAGAGTGCTTTCCTGGCGAGCATGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCACCCATGCAACACTGAACGTGGTAGCACTTGCCTGGGTTCCCGGCACTGTTTGTTATTGACCTaGTACTTGTCCTTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISHPCNTERGSTCLGSRHCLLLT*YLSFPA Trigger: GGCCGGGAAGGACAAGTACCAGGTCAATAACAAACA...GTGCCGGGAACCCAGGCAAGTGCTACCACGTTCAGTGTTGCATGGGTGAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCAGGAAAGACTGTTATCCAGAACAGAGCCCCGAGCTTCCCTCCAGAGATGTTTGTTATTGACCTaGTACTTGTCCTTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASQERLLSRTEPRASLQRCLLLT*YLSFPA Trigger: GGCCGGGAAGGACAAGTACCAGGTCAATAACAAACA...TCTCTGGAGGGAAGCTCGGGGCTCTGTTCTGGATAACAGTCTTTCCTGGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| 3UTR CAA 72 bp | TGTGATTCCTCATCTACAAAGTGGGGCTCACAGAGCTaGCCTCCAAGGCTCTGGAGCATCATCACAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CDSSSTKWGSQS*PPRLWSIITGM Trigger: CATCCCTGTGATGATGCTCCAGAGCCTTGGAGGCAAGCTCTGTGAGCCCCACTTTGTAGATGAGGAATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR TCA 90 bp | TACAAAGGGTACCACAGCAAACAGAAAGGCCAGCCAGGAAAGACTGTTATCCAGCAGTCAAAGCAGACATaGTGCTGGCTGCCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKGYHSKQKGQPGKTVIQQSKQT*CWLPQL Trigger: GAGCTGGGGCAGCCAGCATCATGTCTGCTTTGACTG...CTGGATAACAGTCTTTCCTGGCTGGCCTTTCTGTTTGCTGTGGTACCCTTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCTCACCCATGCAACACTGAACGTGGTAGCACTTGCCTGGGTTCCCGGCACAGTTCATTCACAAAGTaGTCACAGTTCTCGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISHPCNTERGSTCLGSRHSSFTK*SQFSLV Trigger: GACCAGCGAGAACTGTGAGCACTTTGTGAATGAACT...GTGCCGGGAACCCAGGCAAGTGCTACCACGTTCAGTGTTGCATGGGTGAGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCCAATAAGCAGCACCCATCATGGTTTCTGCTTCGGTTCCTGCCTTGAGTCAGGTCTCCAGGCTTaGGTTCTGGTATGGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SKPISSTHHGFCFGSCLESGLQA*VLVWVL Trigger: TAGCACCCATACCAGAACCCAAGCCTGGAGACCTGA...CTCAAGGCAGGAACCGAAGCAGAAACCATGATGGGTGCTGCTTATTGGCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTCCTTCTCACACCACTGAATATCCATAAACTCCAGCGCCTGAGTCTCAAAGGCTGCCCCAGCTCCTaGGATTTCACTTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FVLLTPLNIHKLQRLSLKGCPSS*DFTWRS Trigger: GCTCCTCCAAGTGAAATCGCAGGAGCTGGGGCAGCC...TTTGAGACTCAGGCGCTGGAGTTTATGGATATTCAGTGGTGTGAGAAGGACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGAGGAAGAAAAGAGGCTGTGCACCAGCATTTCCCTTCCTCCACTTCCTCCTGCGATTTCACTTaGAGGAGCCAGGTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKRGRKEAVHQHFPSSTSSCDFT*RSQVDH Trigger: GTGATCCACCTGGCTCCTCCAAGTGAAATCGCAGGA...GGAAGTGGAGGAAGGGAAATGCTGGTGCACAGCCTCTTTTCTTCCTCTTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCATGCTCGCCAGGAAAGCACTCTATCACTGAGCTAAAGCCCCAACACTCCTGTTTGTTATTGACCTaGTACTTGTCCTTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TACSPGKHSITELKPQHSCLLLT*YLSFPA Trigger: GGCCGGGAAGGACAAGTACCAGGTCAATAACAAACA...GGAGTGTTGGGGCTTTAGCTCAGTGATAGAGTGCTTTCCTGGCGAGCATGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | TACAAAGGGTACCACAGCAAACAGAAAGGCCAGCCAGGAAAGACTGTTATCCAGCTTGCTCAGAGGCAGTaGGGTGTACTCCTCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: YKGYHSKQKGQPGKTVIQLAQRQ*GVLLVM Trigger: CATGACGAGGAGTACACCCCACTGCCTCTGAGCAAG...CTGGATAACAGTCTTTCCTGGCTGGCCTTTCTGTTTGCTGTGGTACCCTTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAACCTGAGCCAAAGAAAACTATTCTCTCAGTGCTGGAACTCAGCGAGCACGCTCACAGTTCTCGCTaGTCAGCCTGTAGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KEPEPKKTILSVLELSEHAHSSR*SACRAP Trigger: AGGTGCTCTACAGGCTGACCAGCGAGAACTGTGAGC...GTGCTCGCTGAGTTCCAGCACTGAGAGAATAGTTTTCTTTGGCTCAGGTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | GAACTTTGTGATTCCTCATCTACAAAGTGGGGCTCACAGAGCTTGCCTCCAAGGCCAGCCACTGGCAGTTaGGAAAATGACCTGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: ELCDSSSTKWGSQSLPPRPATGS*ENDLTP Trigger: AGGTGTCAGGTCATTTTCCCAACTGCCAGTGGCTGG...CCTTGGAGGCAAGCTCTGTGAGCCCCACTTTGTAGATGAGGAATCACAAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAACCTGAGCCAAAGAAAACTATTCTCTCAGTGCTGGAACTCAGCGAGCACTCAGGTCTCCAGGCTTaGGTTCTGGTATGGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KEPEPKKTILSVLELSEHSGLQA*VLVWVL Trigger: TAGCACCCATACCAGAACCCAAGCCTGGAGACCTGA...GTGCTCGCTGAGTTCCAGCACTGAGAGAATAGTTTTCTTTGGCTCAGGTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTGTTTTCTGCAATACAAAGGGTACCACAGCAAACAGAAAGGCCAGCCAGGTCCTGCGATTTCACTTaGAGGAGCCAGGTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLFSAIQRVPQQTERPARSCDFT*RSQVDH Trigger: GTGATCCACCTGGCTCCTCCAAGTGAAATCGCAGGA...CCTGGCTGGCCTTTCTGTTTGCTGTGGTACCCTTTGTATTGCAGAAAACAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | ATTCAACTAATGGAGGGCAGAAACCAGATGCTGCCCACTGGAAGATACCTAATGGCTCACAGTTCTCGCTaGTCAGCCTGTAGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IQLMEGRNQMLPTGRYLMAHSSR*SACRAP Trigger: AGGTGCTCTACAGGCTGACCAGCGAGAACTGTGAGC...CATTAGGTATCTTCCAGTGGGCAGCATCTGGTTTCTGCCCTCCATTAGTTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTACCCAGGCTGTCTCCTTTGGCATACCATAGTATCTGGCACGCAGTAAGTTCATTCACAAAGTaGTCACAGTTCTCGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCVPRLSPLAYHSIWHAVSSFTK*SQFSLV Trigger: GACCAGCGAGAACTGTGAGCACTTTGTGAATGAACT...TACTGCGTGCCAGATACTATGGTATGCCAAAGGAGACAGCCTGGGTACACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGCACCAATATTATGGTACATAAGTGGAGGTCAGGAGACAACTTTTGGGAGCTTGGAGGAGCCAGGTaGATCACGTATCCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MCTNIMVHKWRSGDNFWELGGAR*ITYPSP Trigger: TGGTGATGGATACGTGATCCACCTGGCTCCTCCAAG...CTCCCAAAAGTTGTCTCCTGACCTCCACTTATGTACCATAATATTGGTGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| CDS-3UTR CCA 90 bp | AACAGTGTTGGACTCTGTTTTCTGCAATACAAAGGGTACCACAGCAAACAGAAAGCTCACAGTTCTCGCTaGTCAGCCTGTAGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NSVGLCFLQYKGYHSKQKAHSSR*SACRAP Trigger: AGGTGCTCTACAGGCTGACCAGCGAGAACTGTGAGC...TTTCTGTTTGCTGTGGTACCCTTTGTATTGCAGAAAACAGAGTCCAACACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGAATACTCCTCTCTAGTTCACATGAAATCCTCCAAAATCAGTTCTCATCAGTCAAAGCAGACATaGTGCTGGCTGCCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKEYSSLVHMKSSKISSHQSKQT*CWLPQL Trigger: GAGCTGGGGCAGCCAGCATCATGTCTGCTTTGACTG...ATGAGAACTGATTTTGGAGGATTTCATGTGAACTAGAGAGGAGTATTCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR CAA 72 bp | TTAGTTAGAAACGTGCTTGCTGCTCCTCTATGTCCATaGCCCTTGACAAGGGTATATCCTTGTCATAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LVRNVLAAPLCP*PLTRVYPCHSR Trigger: TCGGCTATGACAAGGATATACCCTTGTCAAGGGCAATGGACATAGAGGAGCAGCAAGCACGTTTCTAACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGAATACTCCTCTCTAGTTCACATGAAATCCTCCAAAATCAGTTCTCATCTTGCTCAGAGGCAGTaGGGTGTACTCCTCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKEYSSLVHMKSSKISSHLAQRQ*GVLLVM Trigger: CATGACGAGGAGTACACCCCACTGCCTCTGAGCAAG...ATGAGAACTGATTTTGGAGGATTTCATGTGAACTAGAGAGGAGTATTCTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR CAA 72 bp | TGGAGTACTAGGATTAAAAGTATGCCACCACCGTTATaGCAGTCACCCAGGAACCAGGAACTAATGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: WSTRIKSMPPPL*QSPRNQELMTF Trigger: GAATGTCATTAGTTCCTGGTTCCTGGGTGACTGCAATAACGGTGGTGGCATACTTTTAATCCTAGTACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| 3UTR CAA 72 bp | CAAACTTCCCTCCTTAACCTGCAGCCTGCTGGATGTTaGATCACAGTGGTAAGAAAAGCAGCTAATGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: QTSLLNLQPAGC*ITVVRKAANVT Trigger: AGTTACATTAGCTGCTTTTCTTACCACTGTGATCAAACATCCAGCAGGCTGCAGGTTAAGGAGGGAAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| 3UTR CAA 72 bp | CCCCATAACATTTTGATCTCCGACTACAATGGTAAATaGTCAATTTACTGGCCAAGAATTCACGATCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: PHNILISDYNGK*SIYWPRIHDLL Trigger: AAGTAGATCGTGAATTCTTGGCCAGTAAATTGACAATTTACCATTGTAGTCGGAGATCAAAATGTTATGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| CDS-3UTR CAA 90 bp | GCAAATGTCTCCCCATCTAAGTCACAGTGGCCCAGAGAGGCCAGCAGCCTCTCCGCCCGCTGGATGATCTaGCTCAGAGGCAGTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ANVSPSKSQWPREASSLSARWMI*LRGSGV Trigger: CACCCCACTGCCTCTGAGCAAGATCATCCAGCGGGC...GGAGAGGCTGCTGGCCTCTCTGGGCCACTGTGACTTAGATGGGGAGACATTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| CDS-3UTR CAA 90 bp | ATCTCTCACCCATGCAACACTGAACGTGGTAGCACTTGCCTGGGTTCCCGGCACTTATTGACCTGGTACTaGTCCTTCCCGGCCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: ISHPCNTERGSTCLGSRHLLTWY*SFPATW Trigger: CCATGTGGCCGGGAAGGACAAGTACCAGGTCAATAA...GTGCCGGGAACCCAGGCAAGTGCTACCACGTTCAGTGTTGCATGGGTGAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGAACCAGGAACTAATGACATTCGTCTCAGATCCCTGTCTGCTTCCTTCCATCAGGTCTCCAGGCTaGGGTTCTGGTATGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRNQELMTFVSDPCLLPSIRSPG*GSGMGA Trigger: AGCACCCATACCAGAACCCAAGCCTGGAGACCTGAT...GGAAGGAAGCAGACAGGGATCTGAGACGAATGTCATTAGTTCCTGGTTCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| CDS-3UTR CAA 90 bp | CAAATGTCTCCCCATCTAAGTCACAGTGGCCCAGAGAGGCCAGCAGCCTCTCCCTTCTTCACTATGGCCTaGTCAGTCAAAGCAGACATG | + |
|
Preference number: 5 (lower is better) Translates to: QMSPHLSHSGPERPAASPFFTMA*SVKADM Trigger: CATGTCTGCTTTGACTGACAAGGCCATAGTGAAGAA...GGGAGAGGCTGCTGGCCTCTCTGGGCCACTGTGACTTAGATGGGGAGACATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
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| CDS TCA 90 bp | TCTTGCTCAGAGGCAGTGGGGTGTACTCCTCGTCATGTTTGTTATTaGCCTGGTACTTGTCCTTCCCGGCCACATGGCACAGCAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSEAVGCTPRHVCY*PGTCPSRPHGTAVL Trigger: AAGAACTGCTGTGCCATGTGGCCGGGAAGGACAAGTACCAGGTCAATAACAAACATGACGAGGAGTACACCCCACTGCCTCTGAGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025925.11 ENSMUST00000136465.8 ENSMUST00000136756.2 ENSMUST00000141887.8 |
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| CDS-3UTR CAA 90 bp | GGTCAGGAGACAACTTTTGGGAGTTGGCTTGTTCCTTCCACTGTGTGCATCCCATTATTGACCTGGTACTaGTCCTTCCCGGCCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: GQETTFGSWLVPSTVCIPLLTWY*SFPATW Trigger: CCATGTGGCCGGGAAGGACAAGTACCAGGTCAATAA...TGGGATGCACACAGTGGAAGGAACAAGCCAACTCCCAAAAGTTGTCTCCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
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| CDS-3UTR CAA 90 bp | AGCAAGCCAATAAGCAGCACCCATCATGGTTTCTGCTTCGGTTCCTGCCTTGAGTTATTGACCTGGTACTaGTCCTTCCCGGCCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: SKPISSTHHGFCFGSCLELLTWY*SFPATW Trigger: CCATGTGGCCGGGAAGGACAAGTACCAGGTCAATAA...CTCAAGGCAGGAACCGAAGCAGAAACCATGATGGGTGCTGCTTATTGGCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
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| CDS-3UTR CAA 90 bp | TCCATTGTTATCATGCCCAAAGCATGGCAGCATACAGGCAGACATGGTGCTGAAATCAGGTCTCCAGGCTaGGGTTCTGGTATGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIVIMPKAWQHTGRHGAEIRSPG*GSGMGA Trigger: AGCACCCATACCAGAACCCAAGCCTGGAGACCTGAT...TTCAGCACCATGTCTGCCTGTATGCTGCCATGCTTTGGGCATGATAACAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCCAGCCAGGAAAGACTGTTATCCAGAACAGAGCCCCGAGCTTCCCTCCTCGTCATGTTTGTTATaGACCTGGTACTTGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ERPARKDCYPEQSPELPSSSCLL*TWYLSF Trigger: GAAGGACAAGTACCAGGTCAATAACAAACATGACGA...GGAGGGAAGCTCGGGGCTCTGTTCTGGATAACAGTCTTTCCTGGCTGGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGCTTGTTCCTTCCACTGTGTGCATCCCATGGACTAAACTCGGGTCCACAGTTCTTCACTATGGCCTaGTCAGTCAAAGCAGACATG | + |
|
Preference number: 5 (lower is better) Translates to: VGLFLPLCASHGLNSGPQFFTMA*SVKADM Trigger: CATGTCTGCTTTGACTGACAAGGCCATAGTGAAGAA...CTGTGGACCCGAGTTTAGTCCATGGGATGCACACAGTGGAAGGAACAAGCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025925.11 |
||
| CDS-3UTR CAA 90 bp | AACAGTGTTGGACTCTGTTTTCTGCAATACAAAGGGTACCACAGCAAACAGAAAGCCCGCTGGATGATCTaGCTCAGAGGCAGTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSVGLCFLQYKGYHSKQKARWMI*LRGSGV Trigger: CACCCCACTGCCTCTGAGCAAGATCATCCAGCGGGC...TTTCTGTTTGCTGTGGTACCCTTTGTATTGCAGAAAACAGAGTCCAACACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCACTTGAGATAACAGTGTTGGACTCTGTTTTCTGCAATACAAAGGGTACCATCAGGTCTCCAGGCTaGGGTTCTGGTATGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASLEITVLDSVFCNTKGTIRSPG*GSGMGA Trigger: AGCACCCATACCAGAACCCAAGCCTGGAGACCTGAT...GGTACCCTTTGTATTGCAGAAAACAGAGTCCAACACTGTTATCTCAAGTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGTACCCAGGCTGTCTCCTTTGGCATACCATAGTATCTGGCACGCAGTATCGTCATGTTTGTTATaGACCTGGTACTTGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FCVPRLSPLAYHSIWHAVSSCLL*TWYLSF Trigger: GAAGGACAAGTACCAGGTCAATAACAAACATGACGA...TACTGCGTGCCAGATACTATGGTATGCCAAAGGAGACAGCCTGGGTACACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTCACACCACTGAATATCCATAAACTCCAGCGCCTGAGTCTCAAAGCGCCATACTCCTCGTCATGTTaGTTATTGACCTGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLTPLNIHKLQRLSLKAPYSSSC*LLTWYL Trigger: CAAGTACCAGGTCAATAACAAACATGACGAGGAGTA...TGGCGCTTTGAGACTCAGGCGCTGGAGTTTATGGATATTCAGTGGTGTGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CAA 90 bp | ATTCAACTAATGGAGGGCAGAAACCAGATGCTGCCCACTGGAAGATACCTAATGTACTCCTCGTCATGTTaGTTATTGACCTGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: IQLMEGRNQMLPTGRYLMYSSSC*LLTWYL Trigger: CAAGTACCAGGTCAATAACAAACATGACGAGGAGTA...CATTAGGTATCTTCCAGTGGGCAGCATCTGGTTTCTGCCCTCCATTAGTTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCACTTGAGATAACAGTGTTGGACTCTGTTTTCTGCAATACAAAGGGTACCTACTCCTCGTCATGTTaGTTATTGACCTGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLEITVLDSVFCNTKGTYSSSC*LLTWYL Trigger: CAAGTACCAGGTCAATAACAAACATGACGAGGAGTA...GGTACCCTTTGTATTGCAGAAAACAGAGTCCAACACTGTTATCTCAAGTGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025925.11 ENSMUST00000136756.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGAATACTCCTCTCTAGTTCACATGAAATCCTCCAAAATCAGTTCTCATTCGTCATGTTTGTTATaGACCTGGTACTTGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKEYSSLVHMKSSKISSHSSCLL*TWYLSF Trigger: GAAGGACAAGTACCAGGTCAATAACAAACATGACGA...ATGAGAACTGATTTTGGAGGATTTCATGTGAACTAGAGAGGAGTATTCTTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS GCA 72 bp | TATGGCCTTGTCAGTCAAAGCAGACATGATGCTGGCTaGCCCAGCTCCTGCGATTTCACTTGGAGGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: YGLVSQSRHDAG*PSSCDFTWRSQ Trigger: CTGGCTCCTCCAAGTGAAATCGCAGGAGCTGGGGCAGCCAGCATCATGTCTGCTTTGACTGACAAGGCCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025925.11 ENSMUST00000136465.8 ENSMUST00000136756.2 ENSMUST00000141887.8 |
||
| CDS TCA 72 bp | GAGGCAGTGGGGTGTACTCCTCGTCATGTTTGTTATTaGCCTGGTACTTGTCCTTCCCGGCCACATGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: EAVGCTPRHVCY*PGTCPSRPHGT Trigger: TGTGCCATGTGGCCGGGAAGGACAAGTACCAGGTCAATAACAAACATGACGAGGAGTACACCCCACTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025925.11 ENSMUST00000136465.8 ENSMUST00000136756.2 ENSMUST00000141887.8 |
||
| CDS TCA 72 bp | ACTCAGGTCCAGCCACTGGCAGTTGGGAAAATGACCTaGCACCTAAGGTCAAGGTACAGGGACGGTGACACA | + |
|
Preference number: 6 (lower is better) Translates to: TQVQPLAVGKMT*HLRSRYRDGDT Trigger: TGTGTCACCGTCCCTGTACCTTGACCTTAGGTGTCAGGTCATTTTCCCAACTGCCAGTGGCTGGACCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136465.8 |
||
| CDS CAA 72 bp | AGAGGCAGTGGGGTGTACTCCTCGTCATGTTTGTTATaGACCTGGTACTTGTCCTTCCCGGCCACATGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RGSGVYSSSCLL*TWYLSFPATWH Trigger: GTGCCATGTGGCCGGGAAGGACAAGTACCAGGTCAATAACAAACATGACGAGGAGTACACCCCACTGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025925.11 ENSMUST00000136465.8 ENSMUST00000136756.2 ENSMUST00000141887.8 |
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| CDS CAA 90 bp | TGGATGATCTTGCTCAGAGGCAGTGGGGTGTACTCCTCGTCATGTTaGTTATTGACCTGGTACTTGTCCTTCCCGGCCACATGGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: WMILLRGSGVYSSSC*LLTWYLSFPATWHS Trigger: GCTGTGCCATGTGGCCGGGAAGGACAAGTACCAGGTCAATAACAAACATGACGAGGAGTACACCCCACTGCCTCTGAGCAAGATCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025925.11 ENSMUST00000136465.8 ENSMUST00000136756.2 ENSMUST00000141887.8 |
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| CDS CAA 72 bp | GCCACATGGCACAGCAGTTCTTTCTTCACTATGGCCTaGTCAGTCAAAGCAGACATGATGCTGGCTGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: ATWHSSSFFTMA*SVKADMMLAAP Trigger: TGGGGCAGCCAGCATCATGTCTGCTTTGACTGACAAGGCCATAGTGAAGAAAGAACTGCTGTGCCATGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025925.11 ENSMUST00000136465.8 ENSMUST00000136756.2 ENSMUST00000141887.8 |
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| CDS CAA 72 bp | TTGCTCAGAGGCAGTGGGGTGTACTCCTCGTCATGTTaGTTATTGACCTGGTACTTGTCCTTCCCGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: LLRGSGVYSSSC*LLTWYLSFPAT Trigger: TGTGGCCGGGAAGGACAAGTACCAGGTCAATAACAAACATGACGAGGAGTACACCCCACTGCCTCTGAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025925.11 ENSMUST00000136465.8 ENSMUST00000136756.2 ENSMUST00000141887.8 |
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| CDS CAA 90 bp | ATCTTGCTCAGAGGCAGTGGGGTGTACTCCTCGTCATGTTTGTTATaGACCTGGTACTTGTCCTTCCCGGCCACATGGCACAGCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ILLRGSGVYSSSCLL*TWYLSFPATWHSSS Trigger: AGAACTGCTGTGCCATGTGGCCGGGAAGGACAAGTACCAGGTCAATAACAAACATGACGAGGAGTACACCCCACTGCCTCTGAGCAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025925.11 ENSMUST00000136465.8 ENSMUST00000136756.2 ENSMUST00000141887.8 |
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