RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLA2R1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054580

Ensembl transcript IDs: ENSMUST00000112525.5

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGGCTTCAGGGAAGGCTCAACACAGGATTTCAAAACAGAGCCTTaGCAGCAATCTCATCTCTTTCAGCAAGGCCACGGCTGCAAGGGC +
Preference number: 1 (lower is better)
Translates to: TGFREGSTQDFKTEP*QQSHLFQQGHGCKG
Trigger: GCCCTTGCAGCCGTGGCCTTGCTGAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTTCCCTGAAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR TCA 90 bp AGTGTCCCAGTGTGTCAGCCACATAACAGCAGTAGCAAAGAGCTGTaGCCGGGAGCTGTAGTCGTTGTAATAGTCTACAGGGACTCTAGT +
Preference number: 1 (lower is better)
Translates to: SVPVCQPHNSSSKEL*PGAVVVVIVYRDSS
Trigger: ACTAGAGTCCCTGTAGACTATTACAACGACTACAGCTCCCGGTCACAGCTCTTTGCTACTGCTGTTATGTGGCTGACACACTGGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR TCA 90 bp CAGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTaGGAGTGCCCATGTTTATCCCAGGGACCATACTTAATTTTCATA +
Preference number: 1 (lower is better)
Translates to: QGHGLYWQKYTRRQA*ECPCLSQGPYLIFI
Trigger: TATGAAAATTAAGTATGGTCCCTGGGATAAACATGGGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR GCA 90 bp GGTTTATGGCACAGTTTAAACTGTATGGTTGTTCTTGAGAGTGCCTaGCTACTGAGTTCTTCATATGTAGGAGAAGGTGGTATTTCTCCC +
Preference number: 1 (lower is better)
Translates to: GLWHSLNCMVVLESA*LLSSSYVGEGGISP
Trigger: GGGAGAAATACCACCTTCTCCTACATATGAAGAACTCAGTAGGCAGGCACTCTCAAGAACAACCATACAGTTTAAACTGTGCCATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR CCA 90 bp AAGATATCTTTAAATCAAGGTAATCAATTAACAGGTGAGGGTTTATaGCACAGTTTAAACTGTATGGTTGTTCTTGAGAGTGCCTGCCTA +
Preference number: 1 (lower is better)
Translates to: KISLNQGNQLTGEGL*HSLNCMVVLESACL
Trigger: TAGGCAGGCACTCTCAAGAACAACCATACAGTTTAAACTGTGCCATAAACCCTCACCTGTTAATTGATTACCTTGATTTAAAGATATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR CAA 90 bp TTGGCGAGACTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTaGTCCCATACCCACCCCAGAGCTGGGGTTGCAGATGTGCACCAC +
Preference number: 2 (lower is better)
Translates to: LARLAGERASGIRLV*SHTHPRAGVADVHH
Trigger: GTGGTGCACATCTGCAACCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAGTCTCGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR GCA 90 bp TTCATCAGCTTGGCGAGACTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTCCCCAGAGCTGGGGTTaGAGATGTGCACCACTGCAC +
Preference number: 2 (lower is better)
Translates to: FISLARLAGERASGIRLVPQSWG*RCAPLH
Trigger: GTGCAGTGGTGCACATCTGCAACCCCAGCTCTGGGG...AACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAGTCTCGCCAAGCTGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CCA 90 bp TTCATCAGCTTGGCGAGACTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTACCCACCCCAGAGCTaGGGTTGCAGATGTGCACCA +
Preference number: 2 (lower is better)
Translates to: FISLARLAGERASGIRLVYPPQS*GCRCAP
Trigger: TGGTGCACATCTGCAACCCCAGCTCTGGGGTGGGTA...AACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAGTCTCGCCAAGCTGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR TCA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGAGTCTGGCATACAAAGTaGATTCTAGGACCGCCAGGA +
Preference number: 2 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGVWHTK*ILGPPG
Trigger: TCCTGGCGGTCCTAGAATTCACTTTGTATGCCAGAC...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR GCA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCCGTCTGTGTATAGATTaGTTCCCTGGGAATAACGTG +
Preference number: 2 (lower is better)
Translates to: RAMDCTGRNTQGGKPESARLCID*FPGNNV
Trigger: CACGTTATTCCCAGGGAAGCAATCTATACACAGACG...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCACAGGTGAGGGTTTATaGCACAGTTTAAACTGTATG +
Preference number: 2 (lower is better)
Translates to: LAGERASGIRLVLSHTHPTGEGL*HSLNCM
Trigger: CATACAGTTTAAACTGTGCCATAAACCCTCACCTGT...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGTCTTTATGTGGGTACTaGGGATTTGAACTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVSLCGY*GFELRS
Trigger: GGACCTGAGTTCAAATCCCCAGTACCCACATAAAGA...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR TCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCCTGTATGGTTGTTCTTaGGAGTGCCTGCCTACTGAG +
Preference number: 2 (lower is better)
Translates to: KAQHRISKQSLDSNLISFLYGCS*ECLPTE
Trigger: CTCAGTAGGCAGGCACTCTCAAGAACAACCATACAG...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTTACCATCCTGTCATATaGAGTGAGAGGACACGCCCC +
Preference number: 2 (lower is better)
Translates to: LYQLNCLLAPNIILLILIYHPVI*SERTRP
Trigger: GGGGCGTGTCCTCTCACTCCATATGACAGGATGGTA...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCTTTAATCCCAGCACTTaGGAGGCAGAGGGTTTGAGG +
Preference number: 2 (lower is better)
Translates to: KAQHRISKQSLDSNLISFFNPST*EAEGLR
Trigger: CCTCAAACCCTCTGCCTCCCAAGTGCTGGGATTAAA...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGCTATTCTGTAAGCCCTaGTTAGATTACATATTGCCA +
Preference number: 2 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVLFCKP*LDYILP
Trigger: TGGCAATATGTAATCTAACCAGGGCTTACAGAATAG...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGTCATTAACCAACCAATaGCATCAACTAATCCAAGAC +
Preference number: 2 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVSLTNQ*HQLIQD
Trigger: GTCTTGGATTAGTTGATGCCATTGGTTGGTTAATGA...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTCAAACAAGCACTGACTaGCAGAAGTACCATCCTGTC +
Preference number: 2 (lower is better)
Translates to: LYQLNCLLAPNIILLILIQTSTD*QKYHPV
Trigger: GACAGGATGGTACTTCTGCCAGTCAGTGCTTGTTTG...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR GCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCGATCCCAGTTTGCTGTaGAGAACACATTCATACTTT +
Preference number: 2 (lower is better)
Translates to: KAQHRISKQSLDSNLISFDPSLL*RTHSYF
Trigger: AAAGTATGAATGTGTTCTGCACAGCAAACTGGGATC...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CCA 90 bp CTGGCCCCAAATATCATACTCTTAATCCTCATTAACCAACCAATGGCATCAACTTGGGCCTTTTCAGAATaGGCCACAGTTAAAGGAAAT +
Preference number: 2 (lower is better)
Translates to: LAPNIILLILINQPMASTWAFSE*ATVKGN
Trigger: ATTTCCTTTAACTGTGGCCCATTCTGAAAAGGCCCA...AGTTGATGCCATTGGTTGGTTAATGAGGATTAAGAGTATGATATTTGGGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR GCA 90 bp AGTCCCTTAGTACTCTATGTTTCTGAAATTTCAGCAGTGGGAACAAGTGCAAATGTTCTTGAGAGTGCCTaGCTACTGAGTTCTTCATAT +
Preference number: 2 (lower is better)
Translates to: SPLVLYVSEISAVGTSANVLESA*LLSSSY
Trigger: ATATGAAGAACTCAGTAGGCAGGCACTCTCAAGAAC...ATTTGCACTTGTTCCCACTGCTGAAATTTCAGAAACATAGAGTACTAAGGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR CCA 72 bp CCCCCTAGTGACGAGTGGCAGGTAGCACCAGGGCCATaGATTGTACTGGCAGAAATACACAAGGAGGCAAGC +
Preference number: 3 (lower is better)
Translates to: PPSDEWQVAPGP*IVLAEIHKEAS
Trigger: GCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCTGGTGCTACCTGCCACTCGTCACTAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CAA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGGGGATTCGCCTGGTTTaGTCCCATACCCACCCCAGA +
Preference number: 3 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVGIRLV*SHTHPR
Trigger: TCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCC...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CAA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGCACCAGGGCCATGGATaGTACTGGCAGAAATACACA +
Preference number: 3 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVHQGHG*YWQKYT
Trigger: TGTGTATTTCTGCCAGTACAATCCATGGCCCTGGTG...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR TCA 72 bp GTGTGTCAGCCACATAACAGCAGTAGCAAAGAGCTGTaGCCGGGAGCTGTAGTCGTTGTAATAGTCTACAGG +
Preference number: 3 (lower is better)
Translates to: VCQPHNSSSKEL*PGAVVVVIVYR
Trigger: CCTGTAGACTATTACAACGACTACAGCTCCCGGTCACAGCTCTTTGCTACTGCTGTTATGTGGCTGACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR-3UTR CAA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGAAACATCTTGTTTAGTTaGGTTCTAATGGGAGCACAA +
Preference number: 3 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGNILFS*VLMGAQ
Trigger: TTGTGCTCCCATTAGAACCAAACTAAACAAGATGTT...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR TCA 72 bp GAGGCAGAGGGTTTGAGGCTAGTCTGGCATACAAAGTaGATTCTAGGACCGCCAGGACTGTTTATACAAAGA +
Preference number: 3 (lower is better)
Translates to: EAEGLRLVWHTK*ILGPPGLFIQR
Trigger: TCTTTGTATAAACAGTCCTGGCGGTCCTAGAATTCACTTTGTATGCCAGACTAGCCTCAAACCCTCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR CCA 72 bp GTTTCTGAAATTTCAGCAGTGGGAACAAGTGCAAATTaGTTCATGGGGACAGGCTTCAGGGAAGGCTCAACA +
Preference number: 3 (lower is better)
Translates to: VSEISAVGTSAN*FMGTGFREGST
Trigger: TGTTGAGCCTTCCCTGAAGCCTGTCCCCATGAACCAATTTGCACTTGTTCCCACTGCTGAAATTTCAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR CCA 72 bp CTCTTTAAGTTTGAGTTACATCTATTCTGTAAGCCCTaGTTAGATTACATATTGCCAGGTAGTGGTGGCACA +
Preference number: 3 (lower is better)
Translates to: LFKFELHLFCKP*LDYILPGSGGT
Trigger: TGTGCCACCACTACCTGGCAATATGTAATCTAACCAGGGCTTACAGAATAGATGTAACTCAAACTTAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR TCA 72 bp TCCCATCTGATTTGGTTAAGATTCAAAACCAGTGCTTaGAGATTAATTAAAACAGAGGCGCAATTCACACTA +
Preference number: 3 (lower is better)
Translates to: SHLIWLRFKTSA*RLIKTEAQFTL
Trigger: TAGTGTGAATTGCGCCTCTGTTTTAATTAATCTTCAAGCACTGGTTTTGAATCTTAACCAAATCAGATGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGTGGGCGATGCCCTGGTaGATCCCCAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGWAMPW*IPSSSS
Trigger: GCTGCTGCTGCTGGGGATTCACCAGGGCATCGCCCA...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCTCCGCTGGGTGGGTGTaGAAGAGGTACTCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLVLSHTHPSAGWV*KRYSAF
Trigger: GAACGCCGAGTACCTCTTCCACACCCACCCAGCGGA...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGGTTCCATCAGACCACTaGCAGCCAGCCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGVPSDH*QPAFSS
Trigger: GGATGAGAAGGCTGGCTGGCAGTGGTCTGATGGAAC...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCCTTCGTATCGGCTTGTaGTGGCACACCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLVLSHTHPLRIGL*WHTTAG
Trigger: ACCTGCTGTGGTGTGCCACCACAAGCCGATACGAAG...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR CAA 72 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTaGTCCCATACCCACCCCAGAGCTGGGGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLV*SHTHPRAGVAD
Trigger: ATCTGCAACCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCGCTCGTTTGGCTGCTTaGAGTTCTCCAGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLVLSHTHPARLAA*SSPGSV
Trigger: TACTGACCCTGGAGAACTGCAAGCAGCCAAACGAGC...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGATGTGCTCGTTTGGCTaGTTGCAGTTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGMCSFG*LQFSRV
Trigger: GACCCTGGAGAACTGCAAGCAGCCAAACGAGCACAT...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGACGCTGTCATTCGATTaGCAAGAGTGCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGTLSFD*QECRAP
Trigger: TGGGGCTCTGCACTCTTGCCAATCGAATGACAGCGT...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCGTTCCAATTCACTTTTaGTGGAGACCAGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLVLSHTHPVPIHF*WRPASH
Trigger: GTGGGACGCTGGTCTCCATCAAAAGTGAATTGGAAC...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGCATCCTTCCAATAGGTaGAAGGGGATTTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGHPSNR*KGIWCR
Trigger: ACGGCACCAAATCCCCTTTCACCTATTGGAAGGATG...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGAGCAGCAGCAGCTGTTaGAGCCAGAGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVSSSSC*SQSSCS
Trigger: GCTGCAGCTGCTCTGGCTGCAACAGCTGCTGCTGCT...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGAAATGCTGGCCAGTTCTaGTCTGTGCATCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGNAGQF*SVHPAG
Trigger: TCCTGCCGGATGCACAGAGCAGAACTGGCCAGCATT...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGGAAACGCATCTGGAATaGTGGCCAGTTCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGETHLE*WPVLLC
Trigger: ACAGAGCAGAACTGGCCAGCATTCCAGATGCGTTTC...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCTTGTCAGACTTCACCTaGACCTTGTACTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLVLSHTHPLSDFT*TLYWSG
Trigger: CCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAA...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp TTCATCAGCTTGGCGAGACTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTGGATGTGGCTTGAGGTaGTCCATGTCTGGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: FISLARLAGERASGIRLVGCGLR*SMSGFR
Trigger: TCGGAAGCCAGACATGGACCACCTCAAGCCACATCC...AACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAGTCTCGCCAAGCTGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp TTCATCAGCTTGGCGAGACTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTGGTGCCAGTGACCTTTaGACTGGAAAGGAAACACGC +
Preference number: 4 (lower is better)
Translates to: FISLARLAGERASGIRLVGASDL*TGKETR
Trigger: GCGTGTTTCCTTTCCAGTTCAAAGGTCACTGGCACC...AACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAGTCTCGCCAAGCTGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp TTCATCAGCTTGGCGAGACTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTCGCTATGAAACACCTTaGAGCAACTGGCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: FISLARLAGERASGIRLVRYETP*SNWPDQ
Trigger: CTGGTCTGGCCAGTTGCTTCAAGGTGTTTCATAGCG...AACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAGTCTCGCCAAGCTGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGTGGACTCGCAGTCCCTaGTCCTCCAGGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVWTRSP*SSRQLK
Trigger: TTTCAGCTGCCTGGAGGAGCAGGGACTGCGAGTCCA...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCTTTTGTAACAAAATCTaGCGTGTCTCTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLVLSHTHPFCNKI*RVSPSP
Trigger: CGGGCTGGGAGAGACACGGCAGATTTTGTTACAAAA...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGACTGGTGAAACGCATCTaGAATGCTGGCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGLVKRI*NAGQFC
Trigger: GCAGAACTGGCCAGCATTCCAGATGCGTTTCACCAG...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCGACCATTGTCTGTGGTaGAGAGTCCAATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RAMDCTGRNTQGGKPESADHCLW*RVQSSG
Trigger: CCCACTGGATTGGACTCTCCACCACAGACAATGGTC...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCTATGCCAGCGTCCGTTaGTGTCAGCAAAAGCGCAGT +
Preference number: 4 (lower is better)
Translates to: RAMDCTGRNTQGGKPESAYASVR*CQQKRS
Trigger: ACTGCGCTTTTGCTGACACCAACGGACGCTGGCATA...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGATAGGACGCCCTTTGTaGCCTCTTTTGCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGIGRPL*PLLLSV
Trigger: TACAGAGAGCAAAAGAGGCCACAAAGGGCGTCCTAT...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp CAGATGTGCACCACTGCACTTAGTCTTTATGTGGGTACTGGGGATTTGAACTCAGCTCCTCCAGGCAGCTaGAACAACCTCCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QMCTTALSLYVGTGDLNSAPPGS*NNLQGS
Trigger: GGAACCCTGGAGGTTGTTTCAGCTGCCTGGAGGAGC...TGAGTTCAAATCCCCAGTACCCACATAAAGACTAAGTGCAGTGGTGCACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCTTTTCTCCCAGATTTTaGCTGGTGTCTTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLVLSHTHPFSPRF*LVSCTE
Trigger: CTCTGTGCAAGACACCAGTCAAAATCTGGGAGAAAA...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp TTCATCAGCTTGGCGAGACTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTCATTTCCACAGCATGTaGTCGTTTGGCTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FISLARLAGERASGIRLVHFHSM*SFGCLQ
Trigger: CTGCAAGCAGCCAAACGAGCACATGCTGTGGAAATG...AACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAGTCTCGCCAAGCTGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGAAACTCCTCACAGAATaGTTCTGCTTCTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGKLLTE*FCFSPR
Trigger: TCGTGGAGAGAAGCAGAAGCATTCTGTGAGGAGTTT...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGACTCTTCCAGGAGAAATaGATTTTCAGCCGCATCCCT +
Preference number: 4 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGLFQEK*IFSRIP
Trigger: AGGGATGCGGCTGAAAATTCATTTCTCCTGGAAGAG...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGCTCACAGAATGCTTCTaGTTCTCTCCACGATCTTTT +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGLTECF*FSPRSF
Trigger: AAAAGATCGTGGAGAGAAGCAGAAGCATTCTGTGAG...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGACATGAAGAATGGGCCTaGTTCCAAGACAGAGACGAA +
Preference number: 4 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGHEEWA*FQDRDE
Trigger: TTCGTCTCTGTCTTGGAACCAGGCCCATTCTTCATG...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCACTGAATTTGATCTCTaGCTCCTCCTTCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLVLSHTHPTEFDL*LLLLQV
Trigger: GACTTGAAGAAGGAGGAGCCAGAGATCAAATTCAGT...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp TTCATCAGCTTGGCGAGACTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTCTGACCATTGTCTGTaGTGGAGAGTCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: FISLARLAGERASGIRLVSDHCL*WRVQSS
Trigger: ACTGGATTGGACTCTCCACCACAGACAATGGTCAGA...AACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAGTCTCGCCAAGCTGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCTGTAGCATTTACGATTaGAGGGAGTCCAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RAMDCTGRNTQGGKPESACSIYD*RESSQD
Trigger: ATCCTGACTGGACTCCCTTCAATCGTAAATGCTACA...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCAAATCTCTGCTAGGATaGTCACAAATGTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: RAMDCTGRNTQGGKPESAKSLLG*SQMSPP
Trigger: TGGTGGGGACATTTGTGAGCATCCTAGCAGAGATTT...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGAGACTGGGATTTTATTaGTACTCAAACCAATCCACG +
Preference number: 4 (lower is better)
Translates to: KELLGFAWFCPIPTPELGRLGFY*YSNQST
Trigger: CGTGGATTGGTTTGAGTAGCAATAAAATCCCAGTCT...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAATCCAATCCAGAACTaGCTTTCCTGTGTCCAATTA +
Preference number: 4 (lower is better)
Translates to: LAGERASGIRLVLSHTHPNPIQN*LSCVQL
Trigger: TAATTGGACACAGGAAAGGCAGTTCTGGATTGGATT...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGACATCTTCAAAACTCCTaGTGTCCAGGACTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGHLQNS*CPGLWK
Trigger: TTTCCACAGTCCTGGACAGCAGGAGTTTTGAAGATG...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGGTTCAGGTAGCTGAGTaGTGTTCCATCAGACCACTG +
Preference number: 4 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVVQVAE*CSIRPL
Trigger: CAGTGGTCTGATGGAACACCACTCAGCTACCTGAAC...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGACAGTTGTCTTCTGTTTaGAAGAATTCGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGQLSSV*KNSRLQ
Trigger: CTGGAGCCTCGAATTCTTCCAAACAGAAGACAACTG...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp TTCATCAGCTTGGCGAGACTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTCTCCCAGATTTTGACTaGTGTCTTGCACAGAGACAT +
Preference number: 4 (lower is better)
Translates to: FISLARLAGERASGIRLVLPDFD*CLAQRH
Trigger: ATGTCTCTGTGCAAGACACCAGTCAAAATCTGGGAG...AACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAGTCTCGCCAAGCTGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CAGATGTGCACCACTGCACTTAGTCTTTATGTGGGTACTGGGGATTTGAACTCACCTTTGTCCCAGTTCTaGAATATCACGGGCGACCCG +
Preference number: 4 (lower is better)
Translates to: QMCTTALSLYVGTGDLNSPLSQF*NITGDP
Trigger: CGGGTCGCCCGTGATATTCCAGAACTGGGACAAAGG...TGAGTTCAAATCCCCAGTACCCACATAAAGACTAAGTGCAGTGGTGCACATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGAGCAAAGCACCTCCTTaGATCAGGCATGAAGAATGG +
Preference number: 4 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVSKAPP*IRHEEW
Trigger: CCATTCTTCATGCCTGATGCAAGGAGGTGCTTTGCT...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCCTTGCACAGAGACATTaGCTTAAAGTCGCTACAATC +
Preference number: 4 (lower is better)
Translates to: RAMDCTGRNTQGGKPESALAQRH*LKVATI
Trigger: GATTGTAGCGACTTTAAGGCAATGTCTCTGTGCAAG...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGACATCTCTTGGAATTCTaGATATCCACTCGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGHLLEF*ISTRVW
Trigger: CCAAACACGAGTGGATATGCAGAATTCCAAGAGATG...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGGTACTGGTACCAGTCTaGAAACTTGGGTCTCACATC +
Preference number: 4 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVVLVPV*KLGSHI
Trigger: GATGTGAGACCCAAGTTTCCAGACTGGTACCAGTAC...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp AGTCCCTTAGTACTCTATGTTTCTGAAATTTCAGCAGTGGGAACAAGTGCAAATGCCCACTCCGCTGGGTaGGTGTGGAAGAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: SPLVLYVSEISAVGTSANAHSAG*VWKRYS
Trigger: CGAGTACCTCTTCCACACCCACCCAGCGGAGTGGGC...ATTTGCACTTGTTCCCACTGCTGAAATTTCAGAAACATAGAGTACTAAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATGGTGGCCCACTCCGCTaGGTGGGTGTGGAAGAGGTA +
Preference number: 4 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDGGPLR*VGVEEV
Trigger: TACCTCTTCCACACCCACCCAGCGGAGTGGGCCACC...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTGGCGCCTTGCAGAAATaGCTCGCAGGCTGTGCTATG +
Preference number: 4 (lower is better)
Translates to: LYQLNCLLAPNIILLILIGALQK*LAGCAM
Trigger: CATAGCACAGCCTGCGAGTCATTTCTGCAAGGCGCC...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCTGCAGCCAGAGCAGCTaGAGCATCGCTAACCATTGC +
Preference number: 4 (lower is better)
Translates to: KAQHRISKQSLDSNLISFCSQSS*SIANHC
Trigger: GCAATGGTTAGCGATGCTGCAGCTGCTCTGGCTGCA...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTATGACTCGCAGGCTGTaGTATGCCAGCGTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LYQLNCLLAPNIILLILIMTRRL*YASVRW
Trigger: CCAACGGACGCTGGCATAGCACAGCCTGCGAGTCAT...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATGCACACCACAGCAGGTaGTCTTTCTGCCCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDAHHSR*SFCPSR
Trigger: CCGAGAAGGGCAGAAAGAGCACCTGCTGTGGTGTGC...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTTTCGATTGGCAAGAGTaGAGAGCCCCAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LYQLNCLLAPNIILLILIFDWQE*RAPSQL
Trigger: GAGCTGGCTTGGGGCTCTGCACTCTTGCCAATCGAA...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCCAGCATGTGCTCGTTTaGCTGCTTGCAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KAQHRISKQSLDSNLISFQHVLV*LLAVLQ
Trigger: CTGGAGAACTGCAAGCAGCCAAACGAGCACATGCTG...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGACACATCGCTTTCTCTaGCTATCCACTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVTHRFL*LSTLSS
Trigger: AGAAGAAAGAGTGGATAGCCAGAGAAAGCGATGTGT...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATGAGAGTCCAATCCAGTaGGTGTGTCCCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDESPIQ*VCPSLL
Trigger: CAGCAGGCTGGGACACACCCACTGGATTGGACTCTC...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
3UTR CAA 72 bp ACCACTGCACTTAGTCTTTATGTGGGTACTGGGGATTaGAACTCAGGTCCTCAAGATGGCACAGCAGATACT +
Preference number: 4 (lower is better)
Translates to: TTALSLYVGTGD*NSGPQDGTADT
Trigger: AGTATCTGCTGTGCCATCTTGAGGACCTGAGTTCAAATCCCCAGTACCCACATAAAGACTAAGTGCAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCGAGACGAAAGCAGGTTaGACTGGTAGCAAATGCGTG +
Preference number: 4 (lower is better)
Translates to: KAQHRISKQSLDSNLISFETKAG*TGSKCV
Trigger: CACGCATTTGCTACCAGTTCAACCTGCTTTCGTCTC...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCTCACTCGCTTACAGATaGTGGGCAAAGGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: KAQHRISKQSLDSNLISFSLAYR*WAKEQS
Trigger: GCTCTGTTCCTTTGCCCAGCATCTGTAAGCGAGTGA...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CAGATGTGCACCACTGCACTTAGTCTTTATGTGGGTACTGGGGATTTGAACTCATTCAACCAAACCATCTaGACAGAAGACCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: QMCTTALSLYVGTGDLNSFNQTI*TEDPNA
Trigger: TGCGTTTGGGTCTTCTGTGCAGATGGTTTGGTTGAA...TGAGTTCAAATCCCCAGTACCCACATAAAGACTAAGTGCAGTGGTGCACATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGCCCCAAATATCATACTCTTAATCCTCATTAACCAACCAATGGCATCAACTACGCATCTGGAATGCTaGCCAGTTCTGCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LAPNIILLILINQPMASTTHLEC*PVLLCA
Trigger: TGCACAGAGCAGAACTGGCCAGCATTCCAGATGCGT...AGTTGATGCCATTGGTTGGTTAATGAGGATTAAGAGTATGATATTTGGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATTCCTTGCATCAGGCATaGAGAATGGGCCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDSLHQA*RMGLVP
Trigger: TGGAACCAGGCCCATTCTTCATGCCTGATGCAAGGA...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCCAATCCACACTTCCTTaGCTACCTTGCTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: KAQHRISKQSLDSNLISFQSTLP*LPCSSA
Trigger: AGCACTTGAGCAAGGTAGTCAAGGAAGTGTGGATTG...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp AGTCCCTTAGTACTCTATGTTTCTGAAATTTCAGCAGTGGGAACAAGTGCAAATTCCAGTTCAGGTAGCTaGGTGGTGTTCCATCAGACC +
Preference number: 4 (lower is better)
Translates to: SPLVLYVSEISAVGTSANSSSGS*VVFHQT
Trigger: GGTCTGATGGAACACCACTCAGCTACCTGAACTGGA...ATTTGCACTTGTTCCCACTGCTGAAATTTCAGAAACATAGAGTACTAAGGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCATGCCTTTGTTTCAGTaGCTACGTGACAAATGGCGC +
Preference number: 4 (lower is better)
Translates to: KAQHRISKQSLDSNLISFMPLFQ*LRDKWR
Trigger: GCGCCATTTGTCACGTAGTCACTGAAACAAAGGCAT...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CAGATGTGCACCACTGCACTTAGTCTTTATGTGGGTACTGGGGATTTGAACTCAATGGATCTGTTTTCTTaGCACCACTGTGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: QMCTTALSLYVGTGDLNSMDLFS*HHCVVR
Trigger: TCTGACAACACAGTGGTGGCAAGAAAACAGATCCAT...TGAGTTCAAATCCCCAGTACCCACATAAAGACTAAGTGCAGTGGTGCACATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCGAACTGCCATTCCTTTaGCACGTAGCATCACAGAAC +
Preference number: 4 (lower is better)
Translates to: KAQHRISKQSLDSNLISFELPFL*HVASQN
Trigger: GTTCTGTGATGCTACGTGGCAAAGGAATGGCAGTTC...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGTTCAGGCTCTCGCTCTaGATAATGAAAATTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVFRLSL*IMKIPL
Trigger: TAAAGGAATTTTCATTATCCAGAGCGAGAGCCTGAA...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTCATAGAGGTAGGATCTaGGCAGAATCCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LYQLNCLLAPNIILLILIHRGRI*AESPLL
Trigger: GAGAAGTGGGGATTCTGCCCAGATCCTACCTCTATG...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTACAGATTTACCTGCCTaGATGCATGTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LYQLNCLLAPNIILLILITDLPA*MHVFRL
Trigger: GAGCCTGAAGACATGCATTCAGGCAGGTAAATCTGT...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp AGTCCCTTAGTACTCTATGTTTCTGAAATTTCAGCAGTGGGAACAAGTGCAAATCAGTCAGGATCACAGTaGGTGGCATGGTATTTCCAG +
Preference number: 4 (lower is better)
Translates to: SPLVLYVSEISAVGTSANQSGSQ*VAWYFQ
Trigger: CTGGAAATACCATGCCACTCACTGTGATCCTGACTG...ATTTGCACTTGTTCCCACTGCTGAAATTTCAGAAACATAGAGTACTAAGGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp AGTCCCTTAGTACTCTATGTTTCTGAAATTTCAGCAGTGGGAACAAGTGCAAATGACCAGTCAAAAGTCTaGCCATTGTCTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SPLVLYVSEISAVGTSANDQSKV*PLSVVE
Trigger: CTCCACCACAGACAATGGTCAGACTTTTGACTGGTC...ATTTGCACTTGTTCCCACTGCTGAAATTTCAGAAACATAGAGTACTAAGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATGAGCACAGCCCTGGGTaGTCAAATGCCTTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDEHSPG*SNAFVS
Trigger: TGAAACAAAGGCATTTGAGCACCCAGGGCTGTGCTC...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTAACTGGCCAGACCAGTaGCTGATTCCCAATCCATAT +
Preference number: 4 (lower is better)
Translates to: LYQLNCLLAPNIILLILINWPDQ*LIPNPY
Trigger: ATATGGATTGGGAATCAGCCACTGGTCTGGCCAGTT...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CAGATGTGCACCACTGCACTTAGTCTTTATGTGGGTACTGGGGATTTGAACTCAAGAACCAGCATTCAGTaGGTTCCTTCTATTAAATCC +
Preference number: 4 (lower is better)
Translates to: QMCTTALSLYVGTGDLNSRTSIQ*VPSIKS
Trigger: GGATTTAATAGAAGGAACCCACTGAATGCTGGTTCT...TGAGTTCAAATCCCCAGTACCCACATAAAGACTAAGTGCAGTGGTGCACATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AGTCCCTTAGTACTCTATGTTTCTGAAATTTCAGCAGTGGGAACAAGTGCAAATATCTTCCTGTCACAGTaGCATCTCAGGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: SPLVLYVSEISAVGTSANIFLSQ*HLREMR
Trigger: CCTCATTTCCCTGAGATGGCACTGTGACAGGAAGAT...ATTTGCACTTGTTCCCACTGCTGAAATTTCAGAAACATAGAGTACTAAGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CAGATGTGCACCACTGCACTTAGTCTTTATGTGGGTACTGGGGATTTGAACTCAATAACTGTCCTTTTCTaGCACACTACTGATCAAACT +
Preference number: 4 (lower is better)
Translates to: QMCTTALSLYVGTGDLNSITVLF*HTTDQT
Trigger: AGTTTGATCAGTAGTGTGGCAGAAAAGGACAGTTAT...TGAGTTCAAATCCCCAGTACCCACATAAAGACTAAGTGCAGTGGTGCACATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp AGTCCCTTAGTACTCTATGTTTCTGAAATTTCAGCAGTGGGAACAAGTGCAAATGCAGGACTTTCCGGCTaGATACCAAGTCATATTACC +
Preference number: 4 (lower is better)
Translates to: SPLVLYVSEISAVGTSANAGLSG*IPSHIT
Trigger: GGTAATATGACTTGGTATGCAGCCGGAAAGTCCTGC...ATTTGCACTTGTTCCCACTGCTGAAATTTCAGAAACATAGAGTACTAAGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR TCA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATTCCAGAAGCAAAGCATaGAAATGCCCAGGGCTATTA +
Preference number: 4 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDSRSKA*KCPGLL
Trigger: TAATAGCCCTGGGCATTTTCATGCTTTGCTTCTGGA...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTTCATCAGCAGGGACTTaGCCTGCTTTCTTACAAATA +
Preference number: 4 (lower is better)
Translates to: LYQLNCLLAPNIILLILISSAGT*PAFLQI
Trigger: TATTTGTAAGAAAGCAGGGCAAGTCCCTGCTGATGA...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCCACACATTCGTGGTCTaGCCAAAAAGATTCATAGTA +
Preference number: 4 (lower is better)
Translates to: KAQHRISKQSLDSNLISFHTFVV*PKRFIV
Trigger: TACTATGAATCTTTTTGGCCAGACCACGAATGTGTG...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGCCCCAAATATCATACTCTTAATCCTCATTAACCAACCAATGGCATCAACTCTATCCACACATTCGTaGTCTGGCCAAAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: LAPNIILLILINQPMASTLSTHS*SGQKDS
Trigger: TGAATCTTTTTGGCCAGACCACGAATGTGTGGATAG...AGTTGATGCCATTGGTTGGTTAATGAGGATTAAGAGTATGATATTTGGGGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATTCAGACACGTTTACATaGTGTTCAAGGGTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDSDTFT*CSRVSC
Trigger: GCAAGACACCCTTGAACACCATGTAAACGTGTCTGA...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR GCA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTAGCAGGGACTTGCCCTaGTTTCTTACAAATATAAAA +
Preference number: 4 (lower is better)
Translates to: LYQLNCLLAPNIILLILISRDLP*FLTNIK
Trigger: TTTTATATTTGTAAGAAAGCAGGGCAAGTCCCTGCT...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CCA 90 bp CTGGCCCCAAATATCATACTCTTAATCCTCATTAACCAACCAATGGCATCAACTATTTATTATATCCGATaGAGACCAGTTAGAGTACAC +
Preference number: 4 (lower is better)
Translates to: LAPNIILLILINQPMASTIYYIR*RPVRVH
Trigger: GTGTACTCTAACTGGTCTCCATCGGATATAATAAAT...AGTTGATGCCATTGGTTGGTTAATGAGGATTAAGAGTATGATATTTGGGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp GAACTTCCTCCTCGTACAACAACGCAGCCACCACGATTGCTGGGTTaGCGCGTGTTCCAGTATGTGTACTGCACCGGCTCCCTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: ELPPRTTTQPPRLLG*RVFQYVYCTGSLCP
Trigger: GGGGCAGAGGGAGCCGGTGCAGTACACATACTGGAACACGCGTCAACCCAGCAATCGTGGTGGCTGCGTTGTTGTACGAGGAGGAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp ACTTCGCAGCCAGCCGCAGACAAACTCAAAGGTGGCCCACTCCGCTaGGTGGGTGTGGAAGAGGTACTCGGCGTTCTGATAGAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: TSQPAADKLKGGPLR*VGVEEVLGVLIEEP
Trigger: TGGCTCTTCTATCAGAACGCCGAGTACCTCTTCCACACCCACCCAGCGGAGTGGGCCACCTTTGAGTTTGTCTGCGGCTGGCTGCGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp GCCATATTCCTTCCGGGATCCTCAGGACAACACACGGATGTGGCTTaGGGTGGTCCATGTCTGGCTTCCGAAGGCCCCAGTTGGACTGCT +
Preference number: 5 (lower is better)
Translates to: AIFLPGSSGQHTDVA*GGPCLASEGPSWTA
Trigger: AGCAGTCCAACTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAAGCCACATCCGTGTGTTGTCCTGAGGATCCCGGAAGGAATATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp ATTCCTTCCGGGATCCTCAGGACAACACACGGATGTGGCTTGAGGTaGTCCATGTCTGGCTTCCGAAGGCCCCAGTTGGACTGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: IPSGILRTTHGCGLR*SMSGFRRPQLDCSV
Trigger: CACAGAGCAGTCCAACTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAAGCCACATCCGTGTGTTGTCCTGAGGATCCCGGAAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp GACCAAGTGAACTTCCTCCTCGTACAACAACGCAGCCACCACGATTaGTGGGTTGACGCGTGTTCCAGTATGTGTACTGCACCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: DQVNFLLVQQRSHHD*WVDACSSMCTAPAP
Trigger: GGGAGCCGGTGCAGTACACATACTGGAACACGCGTCAACCCAGCAATCGTGGTGGCTGCGTTGTTGTACGAGGAGGAAGTTCACTTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp CGTGAGGAAGGCCTGGTGAAACGCATCTGGAATGCTGGCCAGTTCTaGTCTGTGCATCCGGCAGGACTTTCCGGCTGCATACCAAGTCAT +
Preference number: 5 (lower is better)
Translates to: REEGLVKRIWNAGQF*SVHPAGLSGCIPSH
Trigger: ATGACTTGGTATGCAGCCGGAAAGTCCTGCCGGATGCACAGAGCAGAACTGGCCAGCATTCCAGATGCGTTTCACCAGGCCTTCCTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp CGCCTTGCAGAAATGACTCGCAGGCTGTGCTATGCCAGCGTCCGTTaGTGTCAGCAAAAGCGCAGTCACCAAGAAAGGCCGACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: RLAEMTRRLCYASVR*CQQKRSHQERPTPH
Trigger: ATGAGGAGTCGGCCTTTCTTGGTGACTGCGCTTTTGCTGACACCAACGGACGCTGGCATAGCACAGCCTGCGAGTCATTTCTGCAAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp GATCTGGGCAGAATCCCCACTTCTCGTCTTCTTCGTATCGGCTTGTaGTGGCACACCACAGCAGGTGCTCTTTCTGCCCTTCTCGGATAC +
Preference number: 5 (lower is better)
Translates to: DLGRIPTSRLLRIGL*WHTTAGALSALLGY
Trigger: GTATCCGAGAAGGGCAGAAAGAGCACCTGCTGTGGTGTGCCACCACAAGCCGATACGAAGAAGACGAGAAGTGGGGATTCTGCCCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp CAAGTGAACTTCCTCCTCGTACAACAACGCAGCCACCACGATTGCTaGGTTGACGCGTGTTCCAGTATGTGTACTGCACCGGCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: QVNFLLVQQRSHHDC*VDACSSMCTAPAPS
Trigger: AGAGGGAGCCGGTGCAGTACACATACTGGAACACGCGTCAACCCAGCAATCGTGGTGGCTGCGTTGTTGTACGAGGAGGAAGTTCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp AAAGTGCCATATTCCTTCCGGGATCCTCAGGACAACACACGGATGTaGCTTGAGGTGGTCCATGTCTGGCTTCCGAAGGCCCCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: KVPYSFRDPQDNTRM*LEVVHVWLPKAPVG
Trigger: TCCAACTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAAGCCACATCCGTGTGTTGTCCTGAGGATCCCGGAAGGAATATGGCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTGGGAATAACGTGTCATGAGCATAGAAGCCACCCTGACTGGTTCACCCCAGGACTATGCCAGCGTCCGTaGGTGTCAGCAAAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: LGITCHEHRSHPDWFTPGLCQRP*VSAKAQ
Trigger: CTGCGCTTTTGCTGACACCAACGGACGCTGGCATAG...TCCTGGGGTGAACCAGTCAGGGTGGCTTCTATGCTCATGACACGTTATTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp TCCCTGCTCCTCCAGGCAGCTGAAACAACCTCCAGGGTTCCACAGTaGTGCTCAACAAATGGCCCAGGAGTTATCTCTTGGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SLLLQAAETTSRVPQ*CSTNGPGVISWLQF
Trigger: GAACTGGAGCCAAGAGATAACTCCTGGGCCATTTGTTGAGCATCACTGTGGAACCCTGGAGGTTGTTTCAGCTGCCTGGAGGAGCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp TATATAAGGCAAGGTGGACTCGCAGTCCCTGCTCCTCCAGGCAGCTaGAACAACCTCCAGGGTTCCACAGTGATGCTCAACAAATGGCCC +
Preference number: 5 (lower is better)
Translates to: YIRQGGLAVPAPPGS*NNLQGSTVMLNKWP
Trigger: GGGCCATTTGTTGAGCATCACTGTGGAACCCTGGAGGTTGTTTCAGCTGCCTGGAGGAGCAGGGACTGCGAGTCCACCTTGCCTTATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp CCTCCTCAAAGCTTCGCAGGACTGTGTCGATTTTGTAACAAAATCTaGCGTGTCTCTCCCAGCCCGCTGGACATCCGGACTGCTCATCAG +
Preference number: 5 (lower is better)
Translates to: PPQSFAGLCRFCNKI*RVSPSPLDIRTAHQ
Trigger: CTGATGAGCAGTCCGGATGTCCAGCGGGCTGGGAGAGACACGGCAGATTTTGTTACAAAATCGACACAGTCCTGCGAAGCTTTGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp GATATGTTCAGGCCTAGGCAGCCACTGCCTCCCACATTAAAGAGGTaGTCGTCGGAAACCCATTTCCACAGCATGTGCTCGTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: DMFRPRQPLPPTLKR*SSETHFHSMCSFGC
Trigger: GCAGCCAAACGAGCACATGCTGTGGAAATGGGTTTCCGACGACCACCTCTTTAATGTGGGAGGCAGTGGCTGCCTAGGCCTGAACATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp AAATGGCCCAGGAGTTATCTCTTGGCTCCAGTTCAGGTAGCTGAGTaGTGTTCCATCAGACCACTGCCAGCCAGCCTTCTCATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: KWPRSYLLAPVQVAE*CSIRPLPASLLIQL
Trigger: CAGCTGGATGAGAAGGCTGGCTGGCAGTGGTCTGATGGAACACCACTCAGCTACCTGAACTGGAGCCAAGAGATAACTCCTGGGCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCTGCTCGTTTGGCTGCTaGCAGTTCTCCAGGGTCAGT +
Preference number: 5 (lower is better)
Translates to: RAMDCTGRNTQGGKPESACSFGC*QFSRVS
Trigger: ACTGACCCTGGAGAACTGCAAGCAGCCAAACGAGCA...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp CAACAAATGGCCCAGGAGTTATCTCTTGGCTCCAGTTCAGGTAGCTaGGTGGTGTTCCATCAGACCACTGCCAGCCAGCCTTCTCATCCA +
Preference number: 5 (lower is better)
Translates to: QQMAQELSLGSSSGS*VVFHQTTASQPSHP
Trigger: TGGATGAGAAGGCTGGCTGGCAGTGGTCTGATGGAACACCACTCAGCTACCTGAACTGGAGCCAAGAGATAACTCCTGGGCCATTTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp CCCACCACTGGACGTGTAGGCGATCCACCTATGGATCTGTTTTCTTaGCACCACTGTGTTGTCAGACTTCACCTGGACCTTGTACTGGAG +
Preference number: 5 (lower is better)
Translates to: PTTGRVGDPPMDLFS*HHCVVRLHLDLVLE
Trigger: CTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCAAGAAAACAGATCCATAGGTGGATCGCCTACACGTCCAGTGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp AGTCCTTTTCCAGGATTCCCTGCGCAGTGTGGTTTAGATCCCGTTTaGATATATAAGGCAAGGTGGACTCGCAGTCCCTGCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SPFPGFPAQCGLDPV*IYKARWTRSPCSSR
Trigger: CCTGGAGGAGCAGGGACTGCGAGTCCACCTTGCCTTATATATGCAAACGGGATCTAAACCACACTGCGCAGGGAATCCTGGAAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp GGCTTGAGGTGGTCCATGTCTGGCTTCCGAAGGCCCCAGTTGGACTaGTCTGTGGGTGTTCCGTCAAACCACCTTAAGGTTTTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: GLRWSMSGFRRPQLD*SVGVPSNHLKVLLL
Trigger: TAACAACAAAACCTTAAGGTGGTTTGACGGAACACCCACAGAGCAGTCCAACTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp TGCCACCACTGTGTTGTCAGACTTCACCTGGACCTTGTACTGGAGTaGGCCCTCGATCATCTTCCTGTCACAGTGCCATCTCAGGGAAAT +
Preference number: 5 (lower is better)
Translates to: CHHCVVRLHLDLVLE*ALDHLPVTVPSQGN
Trigger: ATTTCCCTGAGATGGCACTGTGACAGGAAGATGATCGAGGGCCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp TTTCTTGCCACCACTGTGTTGTCAGACTTCACCTGGACCTTGTACTaGAGTGGGCCCTCGATCATCTTCCTGTCACAGTGCCATCTCAGG +
Preference number: 5 (lower is better)
Translates to: FLATTVLSDFTWTLY*SGPSIIFLSQCHLR
Trigger: CCTGAGATGGCACTGTGACAGGAAGATGATCGAGGGCCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp TGTGTCGATTTTGTAACAAAATCTGCCGTGTCTCTCCCAGCCCGCTaGACATCCGGACTGCTCATCAGCAGGGACTTGCCCTGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: CVDFVTKSAVSLPAR*TSGLLISRDLPCFL
Trigger: AAGAAAGCAGGGCAAGTCCCTGCTGATGAGCAGTCCGGATGTCCAGCGGGCTGGGAGAGACACGGCAGATTTTGTTACAAAATCGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCCTATATGGGCAAAGCTaGCGAGGTGAGCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: RAMDCTGRNTQGGKPESALYGQS*RGEPQT
Trigger: AGTTTGGGGCTCACCTCGCAAGCTTTGCCCATATAG...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCCCTTTGTGGCCTCTTTaGCTCTCTGTAGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: RAMDCTGRNTQGGKPESAPLWPL*LSVAGA
Trigger: TGCTCCAGCTACAGAGAGCAAAAGAGGCCACAAAGG...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp GCTCTTTCTGCCCTTCTCGGATACAGTCATGGTGCCAGTGACCTTTaGACTGGAAAGGAAACACGCAAGGCATCCCATGGGCATTCCCTT +
Preference number: 5 (lower is better)
Translates to: ALSALLGYSHGASDL*TGKETRKASHGHSL
Trigger: AAGGGAATGCCCATGGGATGCCTTGCGTGTTTCCTTTCCAGTTCAAAGGTCACTGGCACCATGACTGTATCCGAGAAGGGCAGAAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp CATTGCCTTAAAGTCGCTACAATCCTTCACTTCCCAGCGACCAAGTaGACTTCCTCCTCGTACAACAACGCAGCCACCACGATTGCTGGG +
Preference number: 5 (lower is better)
Translates to: HCLKVATILHFPATK*TSSSYNNAATTIAG
Trigger: CCCAGCAATCGTGGTGGCTGCGTTGTTGTACGAGGAGGAAGTTCACTTGGTCGCTGGGAAGTGAAGGATTGTAGCGACTTTAAGGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp TGCCTTTGTTTCAGTGACTACGTGACAAATGGCGCCTTGCAGAAATaGCTCGCAGGCTGTGCTATGCCAGCGTCCGTTGGTGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: CLCFSDYVTNGALQK*LAGCAMPASVGVSK
Trigger: TTTGCTGACACCAACGGACGCTGGCATAGCACAGCCTGCGAGTCATTTCTGCAAGGCGCCATTTGTCACGTAGTCACTGAAACAAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp GGTCGTCGGAAACCCATTTCCACAGCATGTGCTCGTTTGGCTGCTTaGAGTTCTCCAGGGTCAGTACAGATTTACCTGCCTGAATGCATG +
Preference number: 5 (lower is better)
Translates to: GRRKPISTACARLAA*SSPGSVQIYLPECM
Trigger: CATGCATTCAGGCAGGTAAATCTGTACTGACCCTGGAGAACTGCAAGCAGCCAAACGAGCACATGCTGTGGAAATGGGTTTCCGACGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp TTAGATCCCGTTTGCATATATAAGGCAAGGTGGACTCGCAGTCCCTaGTCCTCCAGGCAGCTGAAACAACCTCCAGGGTTCCACAGTGAT +
Preference number: 5 (lower is better)
Translates to: LDPVCIYKARWTRSP*SSRQLKQPPGFHSD
Trigger: ATCACTGTGGAACCCTGGAGGTTGTTTCAGCTGCCTGGAGGAGCAGGGACTGCGAGTCCACCTTGCCTTATATATGCAAACGGGATCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp AAAGAGGTGGTCGTCGGAAACCCATTTCCACAGCATGTGCTCGTTTaGCTGCTTGCAGTTCTCCAGGGTCAGTACAGATTTACCTGCCTG +
Preference number: 5 (lower is better)
Translates to: KEVVVGNPFPQHVLV*LLAVLQGQYRFTCL
Trigger: CAGGCAGGTAAATCTGTACTGACCCTGGAGAACTGCAAGCAGCCAAACGAGCACATGCTGTGGAAATGGGTTTCCGACGACCACCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp AGTGGTGTTCCATCAGACCACTGCCAGCCAGCCTTCTCATCCAGCTaGTTCAAACCAATCCACACTTCCTTGACTACCTTGCTCAAGTGC +
Preference number: 5 (lower is better)
Translates to: SGVPSDHCQPAFSSS*FKPIHTSLTTLLKC
Trigger: GCACTTGAGCAAGGTAGTCAAGGAAGTGTGGATTGGTTTGAACCAGCTGGATGAGAAGGCTGGCTGGCAGTGGTCTGATGGAACACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGACAGTTGTCTTCTGTTaGGAAGAATTCGAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: KELLGFAWFCPIPTPELGTVVFC*EEFEAP
Trigger: TGGAGCCTCGAATTCTTCCAAACAGAAGACAACTGT...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp CTATGGATCTGTTTTCTTGCCACCACTGTGTTGTCAGACTTCACCTaGACCTTGTACTGGAGTGGGCCCTCGATCATCTTCCTGTCACAG +
Preference number: 5 (lower is better)
Translates to: LWICFLATTVLSDFT*TLYWSGPSIIFLSQ
Trigger: CTGTGACAGGAAGATGATCGAGGGCCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCAAGAAAACAGATCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp CCTTTGCCACGTAGCATCACAGAACACCTTCATAGAGGTAGGATCTaGGCAGAATCCCCACTTCTCGTCTTCTTCGTATCGGCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: PLPRSITEHLHRGRI*AESPLLVFFVSACG
Trigger: ACCACAAGCCGATACGAAGAAGACGAGAAGTGGGGATTCTGCCCAGATCCTACCTCTATGAAGGTGTTCTGTGATGCTACGTGGCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp CGCATCGTACTGGTACCAGTCTGGAAACTTGGGTCTCACATCTCTTaGAATTCTGCATATCCACTCGTGTTTGGAGGCACAGTTCGAGGG +
Preference number: 5 (lower is better)
Translates to: RIVLVPVWKLGSHIS*NSAYPLVFGGTVRG
Trigger: CCCTCGAACTGTGCCTCCAAACACGAGTGGATATGCAGAATTCCAAGAGATGTGAGACCCAAGTTTCCAGACTGGTACCAGTACGATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp GGCGTTCTGATAGAAGAGCCACGGCGCATCGTACTGGTACCAGTCTaGAAACTTGGGTCTCACATCTCTTGGAATTCTGCATATCCACTC +
Preference number: 5 (lower is better)
Translates to: GVLIEEPRRIVLVPV*KLGSHISWNSAYPL
Trigger: GAGTGGATATGCAGAATTCCAAGAGATGTGAGACCCAAGTTTCCAGACTGGTACCAGTACGATGCGCCGTGGCTCTTCTATCAGAACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTGGCTGGTGAAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCATTTTGACTGGTGTCTaGCACAGAGACATTGCCTTA +
Preference number: 5 (lower is better)
Translates to: LAGERASGIRLVLSHTHPILTGV*HRDIAL
Trigger: TAAGGCAATGTCTCTGTGCAAGACACCAGTCAAAAT...GGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTTCACCAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp CTTTTCGCTATGAAACACCTTGAAGCAACTGGCCAGACCAGTGGCTaGTTCCCAATCCATATAGCAGGGGTGAAACGGCCATCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LFAMKHLEATGQTSG*FPIHIAGVKRPSLF
Trigger: GAAGAGAGATGGCCGTTTCACCCCTGCTATATGGATTGGGAATCAGCCACTGGTCTGGCCAGTTGCTTCAAGGTGTTTCATAGCGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp GATAGAAGAGCCACGGCGCATCGTACTGGTACCAGTCTGGAAACTTaGGTCTCACATCTCTTGGAATTCTGCATATCCACTCGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: DRRATAHRTGTSLET*VSHLLEFCISTRVW
Trigger: CCAAACACGAGTGGATATGCAGAATTCCAAGAGATGTGAGACCCAAGTTTCCAGACTGGTACCAGTACGATGCGCCGTGGCTCTTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp TCTGGAATATCACGGGCGACCCGTTACTCCACTGAATTTGATCTCTaGCTCCTCCTTCTTCAAGTCCGATCCACCACTTCACACCATACT +
Preference number: 5 (lower is better)
Translates to: SGISRATRYSTEFDL*LLLLQVRSTTSHHT
Trigger: AGTATGGTGTGAAGTGGTGGATCGGACTTGAAGAAGGAGGAGCCAGAGATCAAATTCAGTGGAGTAACGGGTCGCCCGTGATATTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp GGTGGTCCATGTCTGGCTTCCGAAGGCCCCAGTTGGACTGCTCTGTaGGTGTTCCGTCAAACCACCTTAAGGTTTTGTTGTTATTATCAA +
Preference number: 5 (lower is better)
Translates to: GGPCLASEGPSWTAL*VFRQTTLRFCCYYQ
Trigger: TTGATAATAACAACAAAACCTTAAGGTGGTTTGACGGAACACCCACAGAGCAGTCCAACTGGGGCCTTCGGAAGCCAGACATGGACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp AAAGAGCTTCTGGGATTCGCCTGGTTTTGTCCCATACCCACCCCAGAGCTGGGGTACTTTGTCAGCCCTTaGATTTTGCTGTGGATGAAT +
Preference number: 5 (lower is better)
Translates to: KELLGFAWFCPIPTPELGYFVSP*ILLWMN
Trigger: ATTCATCCACAGCAAAATCAAAGGGCTGACAAAGTA...CCCCAGCTCTGGGGTGGGTATGGGACAAAACCAGGCGAATCCCAGAAGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGGAGGGTCCTTGGGAATaGTCACCAGGAAGCACTTAT +
Preference number: 5 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVEGPWE*SPGSTY
Trigger: ATAAGTGCTTCCTGGTGACAATTCCCAAGGACCCTC...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp AGGGCCATGGATTGTACTGGCAGAAATACACAAGGAGGCAAGCCTGAGAGTGCCGAGGGCAACAATGTTTaGTTTGCCTTATACACAGCA +
Preference number: 5 (lower is better)
Translates to: RAMDCTGRNTQGGKPESAEGNNV*FALYTA
Trigger: TGCTGTGTATAAGGCAAACAAAACATTGTTGCCCTC...GGCACTCTCAGGCTTGCCTCCTTGTGTATTTCTGCCAGTACAATCCATGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCTTCCGAAGGCCCCAGTaGGACTGCTCTGTGGGTGTT +
Preference number: 5 (lower is better)
Translates to: KAQHRISKQSLDSNLISFFRRPQ*DCSVGV
Trigger: AACACCCACAGAGCAGTCCAACTGGGGCCTTCGGAA...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp GTTCCAAGACAGAGACGAAAGCAGGTTGAACTGGTAGCAAATGCGTaGACTGCCATTCCTTTGCCACGTAGCATCACAGAACACCTTCAT +
Preference number: 5 (lower is better)
Translates to: VPRQRRKQVELVANA*TAIPLPRSITEHLH
Trigger: ATGAAGGTGTTCTGTGATGCTACGTGGCAAAGGAATGGCAGTTCACGCATTTGCTACCAGTTCAACCTGCTTTCGTCTCTGTCTTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp GAACAGAGCAGTTCTCAGTCCCCCAGAGCCCTGTTATGGAAGATATaGAGACACATCGCTTTCTCTGGCTATCCACTCTTTCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: EQSSSQSPRALLWKI*RHIAFSGYPLFLLF
Trigger: GAAGAGAAGAAAGAGTGGATAGCCAGAGAAAGCGATGTGTCTTCATATCTTCCATAACAGGGCTCTGGGGGACTGAGAACTGCTCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp CTCGTTTGGCTGCTTGCAGTTCTCCAGGGTCAGTACAGATTTACCTaGCTGAATGCATGTCTTCAGGCTCTCGCTCTGGATAATGAAAAT +
Preference number: 5 (lower is better)
Translates to: LVWLLAVLQGQYRFT*LNACLQALALDNEN
Trigger: ATTTTCATTATCCAGAGCGAGAGCCTGAAGACATGCATTCAGGCAGGTAAATCTGTACTGACCCTGGAGAACTGCAAGCAGCCAAACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp TCATTCACGAAATTTTCTTCCTCTATATGGGCAAAGCTTGCGAGGTaGGCCCCAAACTCCTCACAGAATGCTTCTGCTTCTCTCCACGAT +
Preference number: 5 (lower is better)
Translates to: SFTKFSSSIWAKLAR*APNSSQNASASLHD
Trigger: ATCGTGGAGAGAAGCAGAAGCATTCTGTGAGGAGTTTGGGGCTCACCTCGCAAGCTTTGCCCATATAGAGGAAGAAAATTTCGTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp AATGCTGGCCAGTTCTGCTCTGTGCATCCGGCAGGACTTTCCGGCTaGATACCAAGTCATATTACCACGGATTATCTTATAAGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: NAGQFCSVHPAGLSG*IPSHITTDYLISSV
Trigger: AACAGAACTTATAAGATAATCCGTGGTAATATGACTTGGTATGCAGCCGGAAAGTCCTGCCGGATGCACAGAGCAGAACTGGCCAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTCTTTCAGCAAGGCCACGGCTGCAAGGGCATACTTTTGTCCACTTGTTATGTGGAGACTGGGATTTTATaGCTACTCAAACCAATCCAC +
Preference number: 5 (lower is better)
Translates to: LFQQGHGCKGILLSTCYVETGIL*LLKPIH
Trigger: GTGGATTGGTTTGAGTAGCAATAAAATCCCAGTCTC...CACATAACAAGTGGACAAAAGTATGCCCTTGCAGCCGTGGCCTTGCTGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATAGCTCCCGAGGGTCCTaGGGAATTGTCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDSSRGS*GIVTRK
Trigger: CTTCCTGGTGACAATTCCCAAGGACCCTCGGGAGCT...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp GACCAGTTAGAGTACACCAGAGGCTTCCCATTTACCCATTTCTCATaGTTAGTACTTTGTAACCCTATCCACACATTCGTGGTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: DQLEYTRGFPFTHFS*LVLCNPIHTFVVWP
Trigger: TGGCCAGACCACGAATGTGTGGATAGGGTTACAAAGTACTAATCATGAGAAATGGGTAAATGGGAAGCCTCTGGTGTACTCTAACTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp AATGCAGATAGGACGCCCTTTGTGGCCTCTTTTGCTCTCTGTAGCTaGAGCATCTCTAACTTCTTCATCATTGGTGTTCTTCTCAAGATC +
Preference number: 5 (lower is better)
Translates to: NADRTPFVASFALCS*SISNFFIIGVLLKI
Trigger: GATCTTGAGAAGAACACCAATGATGAAGAAGTTAGAGATGCTCCAGCTACAGAGAGCAAAAGAGGCCACAAAGGGCGTCCTATCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATCTTCTTCGTATCGGCTaGTGGTGGCACACCACAGCA +
Preference number: 5 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDLLRIG*WWHTTA
Trigger: TGCTGTGGTGTGCCACCACAAGCCGATACGAAGAAG...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTGGCCCCAAATATCATACTCTTAATCCTCATTAACCAACCAATGGCATCAACTCCCAGGAGTTATCTCTaGGCTCCAGTTCAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: LAPNIILLILINQPMASTPRSYL*APVQVA
Trigger: AGCTACCTGAACTGGAGCCAAGAGATAACTCCTGGG...AGTTGATGCCATTGGTTGGTTAATGAGGATTAAGAGTATGATATTTGGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp AAATCTTCTTCATCTTCATCTGCAATACTTAGCAAAGCACCTCCTTaGATCAGGCATGAAGAATGGGCCTGGTTCCAAGACAGAGACGAA +
Preference number: 5 (lower is better)
Translates to: KSSSSSSAILSKAPP*IRHEEWAWFQDRDE
Trigger: TTCGTCTCTGTCTTGGAACCAGGCCCATTCTTCATGCCTGATGCAAGGAGGTGCTTTGCTAAGTATTGCAGATGAAGATGAAGAAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp AAACGGCCATCTCTCTTCAAGCTCTGTTTTCTCCCAGATTTTGACTaGTGTCTTGCACAGAGACATTGCCTTAAAGTCGCTACAATCCTT +
Preference number: 5 (lower is better)
Translates to: KRPSLFKLCFLPDFD*CLAQRHCLKVATIL
Trigger: AAGGATTGTAGCGACTTTAAGGCAATGTCTCTGTGCAAGACACCAGTCAAAATCTGGGAGAAAACAGAGCTTGAAGAGAGATGGCCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp ACTTGGGTCTCACATCTCTTGGAATTCTGCATATCCACTCGTGTTTaGAGGCACAGTTCGAGGGCAACAATGTTTTGTTTGCCTTATACA +
Preference number: 5 (lower is better)
Translates to: TWVSHLLEFCISTRV*RHSSRATMFCLPYT
Trigger: TGTATAAGGCAAACAAAACATTGTTGCCCTCGAACTGTGCCTCCAAACACGAGTGGATATGCAGAATTCCAAGAGATGTGAGACCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATACAGCATGTGCTCGTTaGGCTGCTTGCAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDTACAR*AACSSP
Trigger: TGGAGAACTGCAAGCAGCCAAACGAGCACATGCTGT...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp AAGGCTCAACACAGGATTTCAAAACAGAGCCTTGACAGCAATCTCATCTCTTTCTACCAGTCTGGAAACTaGGGTCTCACATCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: KAQHRISKQSLDSNLISFYQSGN*GLTSLG
Trigger: TCCAAGAGATGTGAGACCCAAGTTTCCAGACTGGTA...GAAAGAGATGAGATTGCTGTCAAGGCTCTGTTTTGAAATCCTGTGTTGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CAGATGTGCACCACTGCACTTAGTCTTTATGTGGGTACTGGGGATTTGAACTCAGCTGTGGATGAATTCTaGCTCCTGAGCAGAATAAAT +
Preference number: 5 (lower is better)
Translates to: QMCTTALSLYVGTGDLNSAVDEF*LLSRIN
Trigger: ATTTATTCTGCTCAGGAGCAAGAATTCATCCACAGC...TGAGTTCAAATCCCCAGTACCCACATAAAGACTAAGTGCAGTGGTGCACATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTCTCATCAGCAGGGACTaGCCCTGCTTTCTTACAAAT +
Preference number: 5 (lower is better)
Translates to: LYQLNCLLAPNIILLILILISRD*PCFLTN
Trigger: ATTTGTAAGAAAGCAGGGCAAGTCCCTGCTGATGAG...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 90 bp GGTGTTCCGTCAAACCACCTTAAGGTTTTGTTGTTATTATCAAACTaGGCATTCAACCAAACCATCTGCACAGAAGACCCAAACGCAAGA +
Preference number: 5 (lower is better)
Translates to: GVPSNHLKVLLLLSN*AFNQTICTEDPNAR
Trigger: TCTTGCGTTTGGGTCTTCTGTGCAGATGGTTTGGTTGAATGCTCAGTTTGATAATAACAACAAAACCTTAAGGTGGTTTGACGGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTGGCCCCAAATATCATACTCTTAATCCTCATTAACCAACCAATGGCATCAACTTATGGATCTGTTTTCTaGCCACCACTGTGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: LAPNIILLILINQPMASTYGSVF*PPLCCQ
Trigger: CTGACAACACAGTGGTGGCAAGAAAACAGATCCATA...AGTTGATGCCATTGGTTGGTTAATGAGGATTAAGAGTATGATATTTGGGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTGGCCCCAAATATCATACTCTTAATCCTCATTAACCAACCAATGGCATCAACTTGGGTCTCACATCTCTaGGAATTCTGCATATCCACT +
Preference number: 5 (lower is better)
Translates to: LAPNIILLILINQPMASTWVSHL*EFCIST
Trigger: AGTGGATATGCAGAATTCCAAGAGATGTGAGACCCA...AGTTGATGCCATTGGTTGGTTAATGAGGATTAAGAGTATGATATTTGGGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 90 bp AGCTGGTTCAAACCAATCCACACTTCCTTGACTACCTTGCTCAAGTaGTTCCTTATGAAATCTTCTTCATCTTCATCTGCAATACTTAGC +
Preference number: 5 (lower is better)
Translates to: SWFKPIHTSLTTLLK*FLMKSSSSSSAILS
Trigger: GCTAAGTATTGCAGATGAAGATGAAGAAGATTTCATAAGGAAGCACTTGAGCAAGGTAGTCAAGGAAGTGTGGATTGGTTTGAACCAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp ATTGTACTGTTGTTGAGAAATAGAGAGAATATGAAGTCAGGTGGGGAAGGAGATGTTTTCTCCCAGATTTaGACTGGTGTCTTGCACAGA +
Preference number: 5 (lower is better)
Translates to: IVLLLRNRENMKSGGEGDVFSQI*TGVLHR
Trigger: TCTGTGCAAGACACCAGTCAAAATCTGGGAGAAAAC...ATCTCCTTCCCCACCTGACTTCATATTCTCTCTATTTCTCAACAACAGTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTGGCCCCAAATATCATACTCTTAATCCTCATTAACCAACCAATGGCATCAACTACTGGTAATAAAAGCTaGTTCAAATCGGCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: LAPNIILLILINQPMASTTGNKS*FKSAGD
Trigger: ATCACCAGCCGATTTGAACAAGCTTTTATTACCAGT...AGTTGATGCCATTGGTTGGTTAATGAGGATTAAGAGTATGATATTTGGGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS-3UTR CAA 90 bp CTTTACCAACTGAACTGTCTCCTGGCCCCAAATATCATACTCTTAATCCTCATTCTAACTTCTTCATCATaGGTGTTCTTCTCAAGATCA +
Preference number: 5 (lower is better)
Translates to: LYQLNCLLAPNIILLILILTSSS*VFFSRS
Trigger: TGATCTTGAGAAGAACACCAATGATGAAGAAGTTAG...AATGAGGATTAAGAGTATGATATTTGGGGCCAGGAGACAGTTCAGTTGGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 90 bp TTGAAATTCAGTGGTGTTATAACTTGGTATATTTATTATATCCGATaGAGACCAGTTAGAGTACACCAGAGGCTTCCCATTTACCCATTT +
Preference number: 5 (lower is better)
Translates to: LKFSGVITWYIYYIR*RPVRVHQRLPIYPF
Trigger: AAATGGGTAAATGGGAAGCCTCTGGTGTACTCTAACTGGTCTCCATCGGATATAATAAATATACCAAGTTATAACACCACTGAATTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp CCTTCCGGGATCCTCAGGACAACACACGGATGTGGCTaGAGGTGGTCCATGTCTGGCTTCCGAAGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: PSGILRTTHGCG*RWSMSGFRRPQ
Trigger: CTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAAGCCACATCCGTGTGTTGTCCTGAGGATCCCGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp CTTCCGGGATCCTCAGGACAACACACGGATGTGGCTTaGGGTGGTCCATGTCTGGCTTCCGAAGGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: LPGSSGQHTDVA*GGPCLASEGPS
Trigger: ACTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAAGCCACATCCGTGTGTTGTCCTGAGGATCCCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp CCAGCCGCAGACAAACTCAAAGGTGGCCCACTCCGCTaGGTGGGTGTGGAAGAGGTACTCGGCGTTCTGATA +
Preference number: 6 (lower is better)
Translates to: PAADKLKGGPLR*VGVEEVLGVLI
Trigger: TATCAGAACGCCGAGTACCTCTTCCACACCCACCCAGCGGAGTGGGCCACCTTTGAGTTTGTCTGCGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp AGTCACTTCGCAGCCAGCCGCAGACAAACTCAAAGGTaGCCCACTCCGCTGGGTGGGTGTGGAAGAGGTACT +
Preference number: 6 (lower is better)
Translates to: SHFAASRRQTQR*PTPLGGCGRGT
Trigger: AGTACCTCTTCCACACCCACCCAGCGGAGTGGGCCACCTTTGAGTTTGTCTGCGGCTGGCTGCGAAGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp GGGATCCTCAGGACAACACACGGATGTGGCTTGAGGTaGTCCATGTCTGGCTTCCGAAGGCCCCAGTTGGAC +
Preference number: 6 (lower is better)
Translates to: GILRTTHGCGLR*SMSGFRRPQLD
Trigger: GTCCAACTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAAGCCACATCCGTGTGTTGTCCTGAGGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp GCGCCTTGCAGAAATGACTCGCAGGCTGTGCTATGCCAGCGTCCGTaGGTGTCAGCAAAAGCGCAGTCACCAAGAAAGGCCGACTCCTCA +
Preference number: 6 (lower is better)
Translates to: APCRNDSQAVLCQRP*VSAKAQSPRKADSS
Trigger: TGAGGAGTCGGCCTTTCTTGGTGACTGCGCTTTTGCTGACACCAACGGACGCTGGCATAGCACAGCCTGCGAGTCATTTCTGCAAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp TGCCATATTCCTTCCGGGATCCTCAGGACAACACACGGATGTGGCTaGAGGTGGTCCATGTCTGGCTTCCGAAGGCCCCAGTTGGACTGC +
Preference number: 6 (lower is better)
Translates to: CHIPSGILRTTHGCG*RWSMSGFRRPQLDC
Trigger: GCAGTCCAACTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAAGCCACATCCGTGTGTTGTCCTGAGGATCCCGGAAGGAATATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp CCTCGTACAACAACGCAGCCACCACGATTGCTGGGTTaGCGCGTGTTCCAGTATGTGTACTGCACCGGCTCC +
Preference number: 6 (lower is better)
Translates to: PRTTTQPPRLLG*RVFQYVYCTGS
Trigger: GGAGCCGGTGCAGTACACATACTGGAACACGCGTCAACCCAGCAATCGTGGTGGCTGCGTTGTTGTACGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp GAGGAGAACCGTGAGGAAGGCCTGGTGAAACGCATCTaGAATGCTGGCCAGTTCTGCTCTGTGCATCCGGCA +
Preference number: 6 (lower is better)
Translates to: EENREEGLVKRI*NAGQFCSVHPA
Trigger: TGCCGGATGCACAGAGCAGAACTGGCCAGCATTCCAGATGCGTTTCACCAGGCCTTCCTCACGGTTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp TTTATCACGCCACTCGAGGGACGGTTCCTGGATGTGAGTCAAATCTaGGGCGATGCCCTGGTGAATCCCCAGCAGCAGCAGCTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: FITPLEGRFLDVSQI*GDALVNPQQQQLLQ
Trigger: CTGCAACAGCTGCTGCTGCTGGGGATTCACCAGGGCATCGCCCAAGATTTGACTCACATCCAGGAACCGTCCCTCGAGTGGCGTGATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp GCCCAGGAGTTATCTCTTGGCTCCAGTTCAGGTAGCTaGGTGGTGTTCCATCAGACCACTGCCAGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: AQELSLGSSSGS*VVFHQTTASQP
Trigger: AGGCTGGCTGGCAGTGGTCTGATGGAACACCACTCAGCTACCTGAACTGGAGCCAAGAGATAACTCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp CGCGTGTTCCAGTATGTGTACTGCACCGGCTCCCTCTaGCCCACGGTCTTCCAAGTGTACTCTCCTGTATTG +
Preference number: 6 (lower is better)
Translates to: RVFQYVYCTGSL*PTVFQVYSPVL
Trigger: CAATACAGGAGAGTACACTTGGAAGACCGTGGGGCAGAGGGAGCCGGTGCAGTACACATACTGGAACACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp GACAAATGGCGCCTTGCAGAAATGACTCGCAGGCTGTaGTATGCCAGCGTCCGTTGGTGTCAGCAAAAGCGC +
Preference number: 6 (lower is better)
Translates to: DKWRLAEMTRRL*YASVRWCQQKR
Trigger: GCGCTTTTGCTGACACCAACGGACGCTGGCATAGCACAGCCTGCGAGTCATTTCTGCAAGGCGCCATTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp AGGCCTAGGCAGCCACTGCCTCCCACATTAAAGAGGTaGTCGTCGGAAACCCATTTCCACAGCATGTGCTCG +
Preference number: 6 (lower is better)
Translates to: RPRQPLPPTLKR*SSETHFHSMCS
Trigger: CGAGCACATGCTGTGGAAATGGGTTTCCGACGACCACCTCTTTAATGTGGGAGGCAGTGGCTGCCTAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TTTGTAACAAAATCTGCCGTGTCTCTCCCAGCCCGCTaGACATCCGGACTGCTCATCAGCAGGGACTTGCCC +
Preference number: 6 (lower is better)
Translates to: FVTKSAVSLPAR*TSGLLISRDLP
Trigger: GGGCAAGTCCCTGCTGATGAGCAGTCCGGATGTCCAGCGGGCTGGGAGAGACACGGCAGATTTTGTTACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TGCCGTCCGACCAGTCAAAAGTCTGACCATTGTCTGTaGTGGAGAGTCCAATCCAGTGGGTGTGTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: CRPTSQKSDHCL*WRVQSSGCVPA
Trigger: GGCTGGGACACACCCACTGGATTGGACTCTCCACCACAGACAATGGTCAGACTTTTGACTGGTCGGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp GAAATGACTCGCAGGCTGTGCTATGCCAGCGTCCGTTaGTGTCAGCAAAAGCGCAGTCACCAAGAAAGGCCG +
Preference number: 6 (lower is better)
Translates to: EMTRRLCYASVR*CQQKRSHQERP
Trigger: CGGCCTTTCTTGGTGACTGCGCTTTTGCTGACACCAACGGACGCTGGCATAGCACAGCCTGCGAGTCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TATTCCTTCCGGGATCCTCAGGACAACACACGGATGTaGCTTGAGGTGGTCCATGTCTGGCTTCCGAAGGCC +
Preference number: 6 (lower is better)
Translates to: YSFRDPQDNTRM*LEVVHVWLPKA
Trigger: GGCCTTCGGAAGCCAGACATGGACCACCTCAAGCCACATCCGTGTGTTGTCCTGAGGATCCCGGAAGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp TCCTCGTACAACAACGCAGCCACCACGATTGCTGGGTaGACGCGTGTTCCAGTATGTGTACTGCACCGGCTC +
Preference number: 6 (lower is better)
Translates to: SSYNNAATTIAG*TRVPVCVLHRL
Trigger: GAGCCGGTGCAGTACACATACTGGAACACGCGTCAACCCAGCAATCGTGGTGGCTGCGTTGTTGTACGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp TTGAGGTGGTCCATGTCTGGCTTCCGAAGGCCCCAGTaGGACTGCTCTGTGGGTGTTCCGTCAAACCACCTT +
Preference number: 6 (lower is better)
Translates to: LRWSMSGFRRPQ*DCSVGVPSNHL
Trigger: AAGGTGGTTTGACGGAACACCCACAGAGCAGTCCAACTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp GGATGTGGCTTGAGGTGGTCCATGTCTGGCTTCCGAAGGCCCCAGTaGGACTGCTCTGTGGGTGTTCCGTCAAACCACCTTAAGGTTTTG +
Preference number: 6 (lower is better)
Translates to: GCGLRWSMSGFRRPQ*DCSVGVPSNHLKVL
Trigger: CAAAACCTTAAGGTGGTTTGACGGAACACCCACAGAGCAGTCCAACTGGGGCCTTCGGAAGCCAGACATGGACCACCTCAAGCCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp TCTTCGTATCGGCTTGTGGTGGCACACCACAGCAGGTaGTCTTTCTGCCCTTCTCGGATACAGTCATGGTGC +
Preference number: 6 (lower is better)
Translates to: SSYRLVVAHHSR*SFCPSRIQSWC
Trigger: GCACCATGACTGTATCCGAGAAGGGCAGAAAGAGCACCTGCTGTGGTGTGCCACCACAAGCCGATACGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp TGGTCCATGTCTGGCTTCCGAAGGCCCCAGTTGGACTaGTCTGTGGGTGTTCCGTCAAACCACCTTAAGGTT +
Preference number: 6 (lower is better)
Translates to: WSMSGFRRPQLD*SVGVPSNHLKV
Trigger: AACCTTAAGGTGGTTTGACGGAACACCCACAGAGCAGTCCAACTGGGGCCTTCGGAAGCCAGACATGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TTCCTCCTCGTACAACAACGCAGCCACCACGATTGCTaGGTTGACGCGTGTTCCAGTATGTGTACTGCACCG +
Preference number: 6 (lower is better)
Translates to: FLLVQQRSHHDC*VDACSSMCTAP
Trigger: CGGTGCAGTACACATACTGGAACACGCGTCAACCCAGCAATCGTGGTGGCTGCGTTGTTGTACGAGGAGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp AGAAATGACTCGCAGGCTGTGCTATGCCAGCGTCCGTaGGTGTCAGCAAAAGCGCAGTCACCAAGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: RNDSQAVLCQRP*VSAKAQSPRKA
Trigger: GGCCTTTCTTGGTGACTGCGCTTTTGCTGACACCAACGGACGCTGGCATAGCACAGCCTGCGAGTCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp GCCCTTCTCGGATACAGTCATGGTGCCAGTGACCTTTaGACTGGAAAGGAAACACGCAAGGCATCCCATGGG +
Preference number: 6 (lower is better)
Translates to: ALLGYSHGASDL*TGKETRKASHG
Trigger: CCCATGGGATGCCTTGCGTGTTTCCTTTCCAGTTCAAAGGTCACTGGCACCATGACTGTATCCGAGAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp TTCAGTGACTACGTGACAAATGGCGCCTTGCAGAAATaGCTCGCAGGCTGTGCTATGCCAGCGTCCGTTGGT +
Preference number: 6 (lower is better)
Translates to: FSDYVTNGALQK*LAGCAMPASVG
Trigger: ACCAACGGACGCTGGCATAGCACAGCCTGCGAGTCATTTCTGCAAGGCGCCATTTGTCACGTAGTCACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp CCAGGATTCCCTGCGCAGTGTGGTTTAGATCCCGTTTaGATATATAAGGCAAGGTGGACTCGCAGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: PGFPAQCGLDPV*IYKARWTRSPC
Trigger: GCAGGGACTGCGAGTCCACCTTGCCTTATATATGCAAACGGGATCTAAACCACACTGCGCAGGGAATCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp AGCTTCGCAGGACTGTGTCGATTTTGTAACAAAATCTaGCGTGTCTCTCCCAGCCCGCTGGACATCCGGACT +
Preference number: 6 (lower is better)
Translates to: SFAGLCRFCNKI*RVSPSPLDIRT
Trigger: AGTCCGGATGTCCAGCGGGCTGGGAGAGACACGGCAGATTTTGTTACAAAATCGACACAGTCCTGCGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp ACCACTGTGTTGTCAGACTTCACCTGGACCTTGTACTaGAGTGGGCCCTCGATCATCTTCCTGTCACAGTGC +
Preference number: 6 (lower is better)
Translates to: TTVLSDFTWTLY*SGPSIIFLSQC
Trigger: GCACTGTGACAGGAAGATGATCGAGGGCCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp AGAATCCCCACTTCTCGTCTTCTTCGTATCGGCTTGTaGTGGCACACCACAGCAGGTGCTCTTTCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: RIPTSRLLRIGL*WHTTAGALSAL
Trigger: AAGGGCAGAAAGAGCACCTGCTGTGGTGTGCCACCACAAGCCGATACGAAGAAGACGAGAAGTGGGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp AGGAGTTATCTCTTGGCTCCAGTTCAGGTAGCTGAGTaGTGTTCCATCAGACCACTGCCAGCCAGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: RSYLLAPVQVAE*CSIRPLPASLL
Trigger: GAGAAGGCTGGCTGGCAGTGGTCTGATGGAACACCACTCAGCTACCTGAACTGGAGCCAAGAGATAACTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp CTTGCCACCACTGTGTTGTCAGACTTCACCTGGACCTaGTACTGGAGTGGGCCCTCGATCATCTTCCTGTCA +
Preference number: 6 (lower is better)
Translates to: LATTVLSDFTWT*YWSGPSIIFLS
Trigger: TGACAGGAAGATGATCGAGGGCCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp CCCCACCACTGGACGTGTAGGCGATCCACCTATGGATCTGTTTTCTaGCCACCACTGTGTTGTCAGACTTCACCTGGACCTTGTACTGGA +
Preference number: 6 (lower is better)
Translates to: PHHWTCRRSTYGSVF*PPLCCQTSPGPCTG
Trigger: TCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCAAGAAAACAGATCCATAGGTGGATCGCCTACACGTCCAGTGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp AAAGTCGCTACAATCCTTCACTTCCCAGCGACCAAGTaGACTTCCTCCTCGTACAACAACGCAGCCACCACG +
Preference number: 6 (lower is better)
Translates to: KVATILHFPATK*TSSSYNNAATT
Trigger: CGTGGTGGCTGCGTTGTTGTACGAGGAGGAAGTTCACTTGGTCGCTGGGAAGTGAAGGATTGTAGCGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp ACAGGAACGATGCTGTGGCTTAGTCCTTTCTCTGGCTaGGCCGTTACAGCTGGGATGCCTGCTTCCATTTTA +
Preference number: 6 (lower is better)
Translates to: TGTMLWLSPFSG*AVTAGMPASIL
Trigger: TAAAATGGAAGCAGGCATCCCAGCTGTAACGGCGCAGCCAGAGAAAGGACTAAGCCACAGCATCGTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TGTGTTGTCAGACTTCACCTGGACCTTGTACTGGAGTaGGCCCTCGATCATCTTCCTGTCACAGTGCCATCT +
Preference number: 6 (lower is better)
Translates to: CVVRLHLDLVLE*ALDHLPVTVPS
Trigger: AGATGGCACTGTGACAGGAAGATGATCGAGGGCCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp CCATCAGACCACTGCCAGCCAGCCTTCTCATCCAGCTaGTTCAAACCAATCCACACTTCCTTGACTACCTTG +
Preference number: 6 (lower is better)
Translates to: PSDHCQPAFSSS*FKPIHTSLTTL
Trigger: CAAGGTAGTCAAGGAAGTGTGGATTGGTTTGAACCAGCTGGATGAGAAGGCTGGCTGGCAGTGGTCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TCACGGGCGACCCGTTACTCCACTGAATTTGATCTCTaGCTCCTCCTTCTTCAAGTCCGATCCACCACTTCA +
Preference number: 6 (lower is better)
Translates to: SRATRYSTEFDL*LLLLQVRSTTS
Trigger: TGAAGTGGTGGATCGGACTTGAAGAAGGAGGAGCCAGAGATCAAATTCAGTGGAGTAACGGGTCGCCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TGTCTGGCTTCCGAAGGCCCCAGTTGGACTGCTCTGTaGGTGTTCCGTCAAACCACCTTAAGGTTTTGTTGT +
Preference number: 6 (lower is better)
Translates to: CLASEGPSWTAL*VFRQTTLRFCC
Trigger: ACAACAAAACCTTAAGGTGGTTTGACGGAACACCCACAGAGCAGTCCAACTGGGGCCTTCGGAAGCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp GGTCGTCGGAAACCCATTTCCACAGCATGTGCTCGTTaGGCTGCTTGCAGTTCTCCAGGGTCAGTACAGATT +
Preference number: 6 (lower is better)
Translates to: GRRKPISTACAR*AACSSPGSVQI
Trigger: AATCTGTACTGACCCTGGAGAACTGCAAGCAGCCAAACGAGCACATGCTGTGGAAATGGGTTTCCGACGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp ATCTGTTTTCTTGCCACCACTGTGTTGTCAGACTTCACCTGGACCTaGTACTGGAGTGGGCCCTCGATCATCTTCCTGTCACAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: ICFLATTVLSDFTWT*YWSGPSIIFLSQCH
Trigger: ATGGCACTGTGACAGGAAGATGATCGAGGGCCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCAAGAAAACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp GCGCATCGTACTGGTACCAGTCTGGAAACTTGGGTCTCACATCTCTaGGAATTCTGCATATCCACTCGTGTTTGGAGGCACAGTTCGAGG +
Preference number: 6 (lower is better)
Translates to: AHRTGTSLETWVSHL*EFCISTRVWRHSSR
Trigger: CCTCGAACTGTGCCTCCAAACACGAGTGGATATGCAGAATTCCAAGAGATGTGAGACCCAAGTTTCCAGACTGGTACCAGTACGATGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp ATGAAACACCTTGAAGCAACTGGCCAGACCAGTGGCTaGTTCCCAATCCATATAGCAGGGGTGAAACGGCCA +
Preference number: 6 (lower is better)
Translates to: MKHLEATGQTSG*FPIHIAGVKRP
Trigger: TGGCCGTTTCACCCCTGCTATATGGATTGGGAATCAGCCACTGGTCTGGCCAGTTGCTTCAAGGTGTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp CCTGGGTGCTCAAATGCCTTTGTTTCAGTGACTACGTaGCAAATGGCGCCTTGCAGAAATGACTCGCAGGCT +
Preference number: 6 (lower is better)
Translates to: PGCSNAFVSVTT*QMAPCRNDSQA
Trigger: AGCCTGCGAGTCATTTCTGCAAGGCGCCATTTGTCACGTAGTCACTGAAACAAAGGCATTTGAGCACCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp GTCGTCGGAAACCCATTTCCACAGCATGTGCTCGTTTaGCTGCTTGCAGTTCTCCAGGGTCAGTACAGATTT +
Preference number: 6 (lower is better)
Translates to: VVGNPFPQHVLV*LLAVLQGQYRF
Trigger: AAATCTGTACTGACCCTGGAGAACTGCAAGCAGCCAAACGAGCACATGCTGTGGAAATGGGTTTCCGACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TGTTTTCTTGCCACCACTGTGTTGTCAGACTTCACCTaGACCTTGTACTGGAGTGGGCCCTCGATCATCTTC +
Preference number: 6 (lower is better)
Translates to: CFLATTVLSDFT*TLYWSGPSIIF
Trigger: GAAGATGATCGAGGGCCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCAAGAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp AAAGCACCTCCTTGCATCAGGCATGAAGAATGGGCCTaGTTCCAAGACAGAGACGAAAGCAGGTTGAACTGG +
Preference number: 6 (lower is better)
Translates to: KAPPCIRHEEWA*FQDRDESRLNW
Trigger: CCAGTTCAACCTGCTTTCGTCTCTGTCTTGGAACCAGGCCCATTCTTCATGCCTGATGCAAGGAGGTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TGTGGTTTAGATCCCGTTTGCATATATAAGGCAAGGTaGACTCGCAGTCCCTGCTCCTCCAGGCAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: CGLDPVCIYKAR*TRSPCSSRQLK
Trigger: TTTCAGCTGCCTGGAGGAGCAGGGACTGCGAGTCCACCTTGCCTTATATATGCAAACGGGATCTAAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp GCCACGGCGCATCGTACTGGTACCAGTCTGGAAACTTaGGTCTCACATCTCTTGGAATTCTGCATATCCACT +
Preference number: 6 (lower is better)
Translates to: ATAHRTGTSLET*VSHLLEFCIST
Trigger: AGTGGATATGCAGAATTCCAAGAGATGTGAGACCCAAGTTTCCAGACTGGTACCAGTACGATGCGCCGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp GAAACCCATTTCCACAGCATGTGCTCGTTTGGCTGCTaGCAGTTCTCCAGGGTCAGTACAGATTTACCTGCC +
Preference number: 6 (lower is better)
Translates to: ETHFHSMCSFGC*QFSRVSTDLPA
Trigger: GGCAGGTAAATCTGTACTGACCCTGGAGAACTGCAAGCAGCCAAACGAGCACATGCTGTGGAAATGGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp TGGACGTGTAGGCGATCCACCTATGGATCTGTTTTCTaGCCACCACTGTGTTGTCAGACTTCACCTGGACCT +
Preference number: 6 (lower is better)
Translates to: WTCRRSTYGSVF*PPLCCQTSPGP
Trigger: AGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCAAGAAAACAGATCCATAGGTGGATCGCCTACACGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp CTGGAATATCACGGGCGACCCGTTACTCCACTGAATTaGATCTCTGGCTCCTCCTTCTTCAAGTCCGATCCA +
Preference number: 6 (lower is better)
Translates to: LEYHGRPVTPLN*ISGSSFFKSDP
Trigger: TGGATCGGACTTGAAGAAGGAGGAGCCAGAGATCAAATTCAGTGGAGTAACGGGTCGCCCGTGATATTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp AAACCCATTTCCACAGCATGTGCTCGTTTGGCTGCTTaGAGTTCTCCAGGGTCAGTACAGATTTACCTGCCT +
Preference number: 6 (lower is better)
Translates to: KPISTACARLAA*SSPGSVQIYLP
Trigger: AGGCAGGTAAATCTGTACTGACCCTGGAGAACTGCAAGCAGCCAAACGAGCACATGCTGTGGAAATGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp AAAGCTTGCGAGGTGAGCCCCAAACTCCTCACAGAATaGTTCTGCTTCTCTCCACGATCTTTTCATCAGGAC +
Preference number: 6 (lower is better)
Translates to: KACEVSPKLLTE*FCFSPRSFHQD
Trigger: GTCCTGATGAAAAGATCGTGGAGAGAAGCAGAAGCATTCTGTGAGGAGTTTGGGGCTCACCTCGCAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp CGTAGCATCACAGAACACCTTCATAGAGGTAGGATCTaGGCAGAATCCCCACTTCTCGTCTTCTTCGTATCG +
Preference number: 6 (lower is better)
Translates to: RSITEHLHRGRI*AESPLLVFFVS
Trigger: CGATACGAAGAAGACGAGAAGTGGGGATTCTGCCCAGATCCTACCTCTATGAAGGTGTTCTGTGATGCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp AACAACCTCCAGGGTTCCACAGTGATGCTCAACAAATaGCCCAGGAGTTATCTCTTGGCTCCAGTTCAGGTA +
Preference number: 6 (lower is better)
Translates to: NNLQGSTVMLNK*PRSYLLAPVQV
Trigger: TACCTGAACTGGAGCCAAGAGATAACTCCTGGGCCATTTGTTGAGCATCACTGTGGAACCCTGGAGGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp ATCCACCTATGGATCTGTTTTCTTGCCACCACTGTGTaGTCAGACTTCACCTGGACCTTGTACTGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: IHLWICFLATTV*SDFTWTLYWSG
Trigger: CCCACTCCAGTACAAGGTCCAGGTGAAGTCTGACAACACAGTGGTGGCAAGAAAACAGATCCATAGGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp ACAGTGATGCTCAACAAATGGCCCAGGAGTTATCTCTaGGCTCCAGTTCAGGTAGCTGAGTGGTGTTCCATC +
Preference number: 6 (lower is better)
Translates to: TVMLNKWPRSYL*APVQVAEWCSI
Trigger: GATGGAACACCACTCAGCTACCTGAACTGGAGCCAAGAGATAACTCCTGGGCCATTTGTTGAGCATCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp GCCCGCTGGACATCCGGACTGCTCATCAGCAGGGACTaGCCCTGCTTTCTTACAAATATAAAAGAGTCTTTC +
Preference number: 6 (lower is better)
Translates to: ARWTSGLLISRD*PCFLTNIKESF
Trigger: GAAAGACTCTTTTATATTTGTAAGAAAGCAGGGCAAGTCCCTGCTGATGAGCAGTCCGGATGTCCAGCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp GGGGAAATGCAGATAGGACGCCCTTTGTGGCCTCTTTaGCTCTCTGTAGCTGGAGCATCTCTAACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GEMQIGRPLWPL*LSVAGASLTSS
Trigger: TGAAGAAGTTAGAGATGCTCCAGCTACAGAGAGCAAAAGAGGCCACAAAGGGCGTCCTATCTGCATTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp CATTTACGATTGAAGGGAGTCCAGTCAGGATCACAGTaGGTGGCATGGTATTTCCAGGAGTCCTTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: HLRLKGVQSGSQ*VAWYFQESFSR
Trigger: CCTGGAAAAGGACTCCTGGAAATACCATGCCACTCACTGTGATCCTGACTGGACTCCCTTCAATCGTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp CTCCCAGATTTTGACTGGTGTCTTGCACAGAGACATTaGCTTAAAGTCGCTACAATCCTTCACTTCCCAGCG +
Preference number: 6 (lower is better)
Translates to: LPDFDWCLAQRH*LKVATILHFPA
Trigger: CGCTGGGAAGTGAAGGATTGTAGCGACTTTAAGGCAATGTCTCTGTGCAAGACACCAGTCAAAATCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp AGTCTGGAAACTTGGGTCTCACATCTCTTGGAATTCTaGATATCCACTCGTGTTTGGAGGCACAGTTCGAGG +
Preference number: 6 (lower is better)
Translates to: SLETWVSHLLEF*ISTRVWRHSSR
Trigger: CCTCGAACTGTGCCTCCAAACACGAGTGGATATGCAGAATTCCAAGAGATGTGAGACCCAAGTTTCCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp TCTCTCCCAGCCCGCTGGACATCCGGACTGCTCATCAGCAGGGACTaGCCCTGCTTTCTTACAAATATAAAAGAGTCTTTCTTTACAATC +
Preference number: 6 (lower is better)
Translates to: SLPARWTSGLLISRD*PCFLTNIKESFFTI
Trigger: GATTGTAAAGAAAGACTCTTTTATATTTGTAAGAAAGCAGGGCAAGTCCCTGCTGATGAGCAGTCCGGATGTCCAGCGGGCTGGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp GTAGAAGCTCATTCACGAAATTTTCTTCCTCTATATGGGCAAAGCTaGCGAGGTGAGCCCCAAACTCCTCACAGAATGCTTCTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: VEAHSRNFLPLYGQS*RGEPQTPHRMLLLL
Trigger: GAGAAGCAGAAGCATTCTGTGAGGAGTTTGGGGCTCACCTCGCAAGCTTTGCCCATATAGAGGAAGAAAATTTCGTGAATGAGCTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp TCATCTTCATCTGCAATACTTAGCAAAGCACCTCCTTaGATCAGGCATGAAGAATGGGCCTGGTTCCAAGAC +
Preference number: 6 (lower is better)
Translates to: SSSSAILSKAPP*IRHEEWAWFQD
Trigger: GTCTTGGAACCAGGCCCATTCTTCATGCCTGATGCAAGGAGGTGCTTTGCTAAGTATTGCAGATGAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp CAGTTCTGCTCTGTGCATCCGGCAGGACTTTCCGGCTaGATACCAAGTCATATTACCACGGATTATCTTATA +
Preference number: 6 (lower is better)
Translates to: QFCSVHPAGLSG*IPSHITTDYLI
Trigger: TATAAGATAATCCGTGGTAATATGACTTGGTATGCAGCCGGAAAGTCCTGCCGGATGCACAGAGCAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp AGGACGCCCTTTGTGGCCTCTTTTGCTCTCTGTAGCTaGAGCATCTCTAACTTCTTCATCATTGGTGTTCTT +
Preference number: 6 (lower is better)
Translates to: RTPFVASFALCS*SISNFFIIGVL
Trigger: AAGAACACCAATGATGAAGAAGTTAGAGATGCTCCAGCTACAGAGAGCAAAAGAGGCCACAAAGGGCGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp CAGCCAGCCTTCTCATCCAGCTGGTTCAAACCAATCCACACTTCCTaGACTACCTTGCTCAAGTGCTTCCTTATGAAATCTTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: QPAFSSSWFKPIHTS*TTLLKCFLMKSSSS
Trigger: AGATGAAGAAGATTTCATAAGGAAGCACTTGAGCAAGGTAGTCAAGGAAGTGTGGATTGGTTTGAACCAGCTGGATGAGAAGGCTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp ATGACAGAGGAGCCACTGGACCACTCAAAGGAGACTGGGATTTTATaGCTACTCAAACCAATCCACGTTTCTGATGCATTTTCATCCCTA +
Preference number: 6 (lower is better)
Translates to: MTEEPLDHSKETGIL*LLKPIHVSDAFSSL
Trigger: TAGGGATGAAAATGCATCAGAAACGTGGATTGGTTTGAGTAGCAATAAAATCCCAGTCTCCTTTGAGTGGTCCAGTGGCTCCTCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp CATCTCTCTTCAAGCTCTGTTTTCTCCCAGATTTTGACTGGTGTCTaGCACAGAGACATTGCCTTAAAGTCGCTACAATCCTTCACTTCC +
Preference number: 6 (lower is better)
Translates to: HLSSSSVFSQILTGV*HRDIALKSLQSFTS
Trigger: GGAAGTGAAGGATTGTAGCGACTTTAAGGCAATGTCTCTGTGCAAGACACCAGTCAAAATCTGGGAGAAAACAGAGCTTGAAGAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp AACTTGGGTCTCACATCTCTTGGAATTCTGCATATCCACTCGTGTTaGGAGGCACAGTTCGAGGGCAACAATGTTTTGTTTGCCTTATAC +
Preference number: 6 (lower is better)
Translates to: NLGLTSLGILHIHSC*EAQFEGNNVLFALY
Trigger: GTATAAGGCAAACAAAACATTGTTGCCCTCGAACTGTGCCTCCAAACACGAGTGGATATGCAGAATTCCAAGAGATGTGAGACCCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp CACACCATACTTTGTCAGCCCTTTGATTTTGCTGTGGATGAATTCTaGCTCCTGAGCAGAATAAATTGTGAGGAAGTCACTTCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: HTILCQPFDFAVDEF*LLSRINCEEVTSQP
Trigger: TGGCTGCGAAGTGACTTCCTCACAATTTATTCTGCTCAGGAGCAAGAATTCATCCACAGCAAAATCAAAGGGCTGACAAAGTATGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TCACATCTCTTGGAATTCTGCATATCCACTCGTGTTTaGAGGCACAGTTCGAGGGCAACAATGTTTTGTTTG +
Preference number: 6 (lower is better)
Translates to: SHLLEFCISTRV*RHSSRATMFCL
Trigger: CAAACAAAACATTGTTGCCCTCGAACTGTGCCTCCAAACACGAGTGGATATGCAGAATTCCAAGAGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp GAGCCACTGGACCACTCAAAGGAGACTGGGATTTTATaGCTACTCAAACCAATCCACGTTTCTGATGCATTT +
Preference number: 6 (lower is better)
Translates to: EPLDHSKETGIL*LLKPIHVSDAF
Trigger: AAATGCATCAGAAACGTGGATTGGTTTGAGTAGCAATAAAATCCCAGTCTCCTTTGAGTGGTCCAGTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp CTCACATCTCTTGGAATTCTGCATATCCACTCGTGTTaGGAGGCACAGTTCGAGGGCAACAATGTTTTGTTT +
Preference number: 6 (lower is better)
Translates to: LTSLGILHIHSC*EAQFEGNNVLF
Trigger: AAACAAAACATTGTTGCCCTCGAACTGTGCCTCCAAACACGAGTGGATATGCAGAATTCCAAGAGATGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp AGATTCATAGTAATAAAAGCTTGTTCCAATTCACTTTaGATGGAGACCAGCGTCCCACCCTTGGCGACACAG +
Preference number: 6 (lower is better)
Translates to: RFIVIKACSNSL*METSVPPLATQ
Trigger: CTGTGTCGCCAAGGGTGGGACGCTGGTCTCCATCAAAAGTGAATTGGAACAAGCTTTTATTACTATGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp GAGTACACCAGAGGCTTCCCATTTACCCATTTCTCATaGTTAGTACTTTGTAACCCTATCCACACATTCGTG +
Preference number: 6 (lower is better)
Translates to: EYTRGFPFTHFS*LVLCNPIHTFV
Trigger: CACGAATGTGTGGATAGGGTTACAAAGTACTAATCATGAGAAATGGGTAAATGGGAAGCCTCTGGTGTACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS GCA 72 bp AGCCACTGGACCACTCAAAGGAGACTGGGATTTTATTaGTACTCAAACCAATCCACGTTTCTGATGCATTTT +
Preference number: 6 (lower is better)
Translates to: SHWTTQRRLGFY*YSNQSTFLMHF
Trigger: AAAATGCATCAGAAACGTGGATTGGTTTGAGTAGCAATAAAATCCCAGTCTCCTTTGAGTGGTCCAGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp CCTTTGAACTGGAAAGGAAACACGCAAGGCATCCCATaGGCATTCCCTTTTAACGTATATAAATCTCTGCTA +
Preference number: 6 (lower is better)
Translates to: PLNWKGNTQGIP*AFPFNVYKSLL
Trigger: TAGCAGAGATTTATATACGTTAAAAGGGAATGCCCATGGGATGCCTTGCGTGTTTCCTTTCCAGTTCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp TTCTCATCCAGCTGGTTCAAACCAATCCACACTTCCTaGACTACCTTGCTCAAGTGCTTCCTTATGAAATCT +
Preference number: 6 (lower is better)
Translates to: FSSSWFKPIHTS*TTLLKCFLMKS
Trigger: AGATTTCATAAGGAAGCACTTGAGCAAGGTAGTCAAGGAAGTGTGGATTGGTTTGAACCAGCTGGATGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp TTCTCATCCAGCTGGTTCAAACCAATCCACACTTCCTTGACTACCTaGCTCAAGTGCTTCCTTATGAAATCTTCTTCATCTTCATCTGCA +
Preference number: 6 (lower is better)
Translates to: FSSSWFKPIHTSLTT*LKCFLMKSSSSSSA
Trigger: TGCAGATGAAGATGAAGAAGATTTCATAAGGAAGCACTTGAGCAAGGTAGTCAAGGAAGTGTGGATTGGTTTGAACCAGCTGGATGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp AGCTGGTTCAAACCAATCCACACTTCCTTGACTACCTaGCTCAAGTGCTTCCTTATGAAATCTTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: SWFKPIHTSLTT*LKCFLMKSSSS
Trigger: AGATGAAGAAGATTTCATAAGGAAGCACTTGAGCAAGGTAGTCAAGGAAGTGTGGATTGGTTTGAACCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp TGTCACTTTTCTGCTTATATATCCAGAAGCAAAGCATaGAAATGCCCAGGGCTATTATCAACGTCAGCGTTA +
Preference number: 6 (lower is better)
Translates to: CHFSAYISRSKA*KCPGLLSTSAL
Trigger: TAACGCTGACGTTGATAATAGCCCTGGGCATTTTCATGCTTTGCTTCTGGATATATAAGCAGAAAAGTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp CTCTCTGTAGCTGGAGCATCTCTAACTTCTTCATCATaGGTGTTCTTCTCAAGATCAGAAATGAGAATGTTC +
Preference number: 6 (lower is better)
Translates to: LSVAGASLTSSS*VFFSRSEMRMF
Trigger: GAACATTCTCATTTCTGATCTTGAGAAGAACACCAATGATGAAGAAGTTAGAGATGCTCCAGCTACAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 90 bp CCTCTTTTGCTCTCTGTAGCTGGAGCATCTCTAACTTCTTCATCATaGGTGTTCTTCTCAAGATCAGAAATGAGAATGTTCTCTTCTAAA +
Preference number: 6 (lower is better)
Translates to: PLLLSVAGASLTSSS*VFFSRSEMRMFSSK
Trigger: TTTAGAAGAGAACATTCTCATTTCTGATCTTGAGAAGAACACCAATGATGAAGAAGTTAGAGATGCTCCAGCTACAGAGAGCAAAAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS TCA 72 bp TGGGATTTTATTGCTACTCAAACCAATCCACGTTTCTaGTGCATTTTCATCCCTAAGGAGGCTTACAAGAAA +
Preference number: 6 (lower is better)
Translates to: WDFIATQTNPRF*CIFIPKEAYKK
Trigger: TTTCTTGTAAGCCTCCTTAGGGATGAAAATGCATCAGAAACGTGGATTGGTTTGAGTAGCAATAAAATCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp AGTGGTGTTATAACTTGGTATATTTATTATATCCGATaGAGACCAGTTAGAGTACACCAGAGGCTTCCCATT +
Preference number: 6 (lower is better)
Translates to: SGVITWYIYYIR*RPVRVHQRLPI
Trigger: AATGGGAAGCCTCTGGTGTACTCTAACTGGTCTCCATCGGATATAATAAATATACCAAGTTATAACACCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CAA 72 bp TATAAGTTCTGTTTCCATATTCTAACGTACTGGGGATaGCAGACGTATCAGACACGTTTACATGGTGTTCAA +
Preference number: 6 (lower is better)
Translates to: YKFCFHILTYWG*QTYQTRLHGVQ
Trigger: TTGAACACCATGTAAACGTGTCTGATACGTCTGCAATCCCCAGTACGTTAGAATATGGAAACAGAACTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5
CDS CCA 72 bp TTATCTTATAAGTTCTGTTTCCATATTCTAACGTACTaGGGATTGCAGACGTATCAGACACGTTTACATGGT +
Preference number: 6 (lower is better)
Translates to: LSYKFCFHILTY*GLQTYQTRLHG
Trigger: ACCATGTAAACGTGTCTGATACGTCTGCAATCCCCAGTACGTTAGAATATGGAAACAGAACTTATAAGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112525.5