Pregenerated sensors for PLA2G5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041193Ensembl transcript IDs: ENSMUST00000030524.14, ENSMUST00000102511.2, ENSMUST00000102512.11, ENSMUST00000102513.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCTGGCCTTGAACTCCCGATTCTCTTGCCTCCACCTTCCAGGTaGTGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: EAGLELPILLPPPSR*WDWGVHQYTPGRSL Trigger: AAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCTGGAAGGTGGAGGCAAGAGAATCGGGAGTTCAAGGCCAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR CCA 90 bp | GCTGGCCTTGAACTCCCGATTCTCTTGCCTCCACCTTCCAGGTGCTaGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: AGLELPILLPPPSRC*DWGVHQYTPGRSLV Trigger: AACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCTGGAAGGTGGAGGCAAGAGAATCGGGAGTTCAAGGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR TCA 90 bp | ACAGTTGGGTTCCAGAAATTGAAAGAAAAGTCAACACGGCTGGCCTaGGCCGGGGGAGCTTCAGGGCCCAGAGCCAACTTAGCAAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: TVGFQKLKEKSTRLA*AGGASGPRANLASA Trigger: TGCACTTGCTAAGTTGGCTCTGGGCCCTGAAGCTCCCCCGGCTCAGGCCAGCCGTGTTGACTTTTCTTTCAATTTCTGGAACCCAACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR CCA 90 bp | CTATCCAAAGGTTTAAAAGACCATACAGCTGCCAGAAGCCAGGGCTaGGAGCTGATTGTTGCCCTCTCTAGCCAGGAGCTCAAGGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: LSKGLKDHTAARSQG*ELIVALSSQELKVA Trigger: TGCCACCTTGAGCTCCTGGCTAGAGAGGGCAACAATCAGCTCCCAGCCCTGGCTTCTGGCAGCTGTATGGTCTTTTAAACCTTTGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR CCA 90 bp | CTTGAACTCCCGATTCTCTTGCCTCCACCTTCCAGGTGCTGGGATTaGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTATAT | + |
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Preference number: 1 (lower is better) Translates to: LELPILLPPPSRCWD*GVHQYTPGRSLVLY Trigger: ATATAAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCTGGAAGGTGGAGGCAAGAGAATCGGGAGTTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR TCA 90 bp | ACTGCTTTACTGTTGAATACATCTCTTCCTCCTGTCTTGTTGCTATaGGAAAGTTCTGTCTTTTATAAAGCGATAGATGACTTGAGATTT | + |
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Preference number: 1 (lower is better) Translates to: TALLLNTSLPPVLLL*ESSVFYKAIDDLRF Trigger: AAATCTCAAGTCATCTATCGCTTTATAAAAGACAGAACTTTCTCATAGCAACAAGACAGGAGGAAGAGATGTATTCAACAGTAAAGCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTCCACTGGTGCACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGGAGACTGCCACCGTaGGAGGTGCCCCCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSPLVHRGRQIQDLVGEAGRLPP*EVPPGQ Trigger: CTGCCCTGGGGGCACCTCCCACGGTGGCAGTCTCCC...CGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCAGTGGACTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAGGAATGGGAGACTGCCACCGTaGGAGGTGCCCCCAGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HRGRQIQDLVGEAGHIRNGRLPP*EVPPGQ Trigger: CTGCCCTGGGGGCACCTCCCACGGTGGCAGTCTCCC...ATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAGGAATACAGCGGGAGACTGCCACCGTaGGAGGTGCCCCCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RKADPRPCGGGGTHQEYSGRLPP*EVPPGQ Trigger: CTGCCCTGGGGGCACCTCCCACGGTGGCAGTCTCCC...GCTGTATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAGGAATATGCCACCGTGGGAGGTaGCCCCAGGGCAGAGCGCAC | + |
|
Preference number: 2 (lower is better) Translates to: TEEGRSKTLWGRRDTSGICHRGR*PQGRAH Trigger: GTGCGCTCTGCCCTGGGGGCACCTCCCACGGTGGCA...TATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTGCTGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTATGCCACCGTGGGAGGTaGCCCCAGGGCAGAGCGCAC | + |
|
Preference number: 2 (lower is better) Translates to: RCWDWGVHQYTPGRSLVLCHRGR*PQGRAH Trigger: GTGCGCTCTGCCCTGGGGGCACCTCCCACGGTGGCA...TAAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR CAA 90 bp | CTCTGTCCAGTCCACTGGTGCACAGAGGAAGGCAGATCCAAGACCTaGTGGGGGAGGCGGGACACATCAGGAATACAGCAGAGGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: LCPVHWCTEEGRSKT*WGRRDTSGIQQRET Trigger: AGTCTCCCTCTGCTGTATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCAGTGGACTGGACAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGTGTCTCATCTTCCTCCAGAAGAAACATAAACCCCAGGTCTGGCTTGAATCAACACGGCTGGCCTaGGCCGGGGGAGCTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GLCLIFLQKKHKPQVWLESTRLA*AGGASG Trigger: CCCTGAAGCTCCCCCGGCTCAGGCCAGCCGTGTTGA...TTCAAGCCAGACCTGGGGTTTATGTTTCTTCTGGAGGAAGATGAGACACAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCCCTGTATCTGTACCAGGGTCCTTTCTGAAACACAGTCTCACATAGTCTCAACACGGCTGGCCTaGGCCGGGGGAGCTTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QLPCICTRVLSETQSHIVSTRLA*AGGASG Trigger: CCCTGAAGCTCCCCCGGCTCAGGCCAGCCGTGTTGA...GACTATGTGAGACTGTGTTTCAGAAAGGACCCTGGTACAGATACAGGGGAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTATATTTTTGCCACCGTGGGAGGTaGCCCCAGGGCAGAGCGCAC | + |
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Preference number: 2 (lower is better) Translates to: WDWGVHQYTPGRSLVLYFCHRGR*PQGRAH Trigger: GTGCGCTCTGCCCTGGGGGCACCTCCCACGGTGGCA...AAAATATAAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGCTGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTCCCTTCCTCGGACTCTaGAGGGAAGAGTGTAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: QVLGLGCAPVYSWKEPCFPFLGL*REECSP Trigger: AGGGCTACACTCTTCCCTCCAGAGTCCGAGGAAGGG...AAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCCCTGTATCTGTACCAGGGTCCTTTCTGAAACACAGTCTCACATAGTCAGCAGAGGCTGGCCTTaGACTCCCGATTCTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: QLPCICTRVLSETQSHIVSRGWP*TPDSLA Trigger: GGCAAGAGAATCGGGAGTTCAAGGCCAGCCTCTGCT...GACTATGTGAGACTGTGTTTCAGAAAGGACCCTGGTACAGATACAGGGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTGCTGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTATGTCCAGTCCACTGGTaGACAGAGGAAGGCAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: RCWDWGVHQYTPGRSLVLCPVHW*TEEGRS Trigger: GGATCTGCCTTCCTCTGTGCACCAGTGGACTGGACA...TAAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCCCTGTATCTGTACCAGGGTCCTTTCTGAAACACAGTCTCACATAGTCCAGGCTCAGCCATCCTaGGAGTCTGCCAACTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: QLPCICTRVLSETQSHIVQAQPS*ESANSR Trigger: TCTAGAGTTGGCAGACTCTCAGGATGGCTGAGCCTG...GACTATGTGAGACTGTGTTTCAGAAAGGACCCTGGTACAGATACAGGGGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCGGACTATCCAAAGGTTTAAAAGACCATACAGCTGCCAGAAGCCAGGGCTGGCCAGGAGCTCAAGGTaGCATAGGGCTGTGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: IRTIQRFKRPYSCQKPGLARSSR*HRAVSH Trigger: ATGAGACACAGCCCTATGCCACCTTGAGCTCCTGGC...CAGCCCTGGCTTCTGGCAGCTGTATGGTCTTTTAAACCTTTGGATAGTCCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCCCCTGTATCTGTACCAGGGTCCTTTCTGAAACACAGTCTCACATAGTCGAGGAAGTGCTGGGGTaGTGTTTTTCTAGCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: QLPCICTRVLSETQSHIVEEVLG*CFSSLE Trigger: CTCAAGGCTAGAAAAACACCACCCCAGCACTTCCTC...GACTATGTGAGACTGTGTTTCAGAAAGGACCCTGGTACAGATACAGGGGAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTATATTTTACCCCAGGTCTGGCTTaGAGGAGCCTAAGGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: WDWGVHQYTPGRSLVLYFTPGLA*RSLRLK Trigger: CTTCAACCTTAGGCTCCTTCAAGCCAGACCTGGGGT...AAAATATAAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGCTTTACTGTTGAATACATCTCTTCCTCCTGTCTTGTTGCTATGAGAAAGCCACCTTCCAGGTGCTaGGATTGGGGTGTGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: HCFTVEYISSSCLVAMRKPPSRC*DWGVHQ Trigger: CTGGTGCACACCCCAATCCCAGCACCTGGAAGGTGG...CTTTCTCATAGCAACAAGACAGGAGGAAGAGATGTATTCAACAGTAAAGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | GAGATTCGGACTATCCAAAGGTTTAAAAGACCATACAGCTGCCAGAAGCCAGGGCCAGTAAAAGGTCTCTaGAGGGTGCTAATGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: EIRTIQRFKRPYSCQKPGPVKGL*RVLMTV Trigger: AACTGTCATTAGCACCCTCCAGAGACCTTTTACTGG...CCCTGGCTTCTGGCAGCTGTATGGTCTTTTAAACCTTTGGATAGTCCGAATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCCCCTGTATCTGTACCAGGGTCCTTTCTGAAACACAGTCTCACATAGTCGCACCAGTATACTCCTaGAAGGAGCCTTGTTTTATA | + |
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Preference number: 2 (lower is better) Translates to: QLPCICTRVLSETQSHIVAPVYS*KEPCFI Trigger: TATAAAACAAGGCTCCTTCCAGGAGTATACTGGTGC...GACTATGTGAGACTGTGTTTCAGAAAGGACCCTGGTACAGATACAGGGGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTTGAATACATCTCTTCCTCCTGTCTTGTTGCTATGAGAAAGTTCTGTCTTGCCAGGAGCTCAAGGTaGCATAGGGCTGTGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: TVEYISSSCLVAMRKFCLARSSR*HRAVSH Trigger: ATGAGACACAGCCCTATGCCACCTTGAGCTCCTGGC...AAGACAGAACTTTCTCATAGCAACAAGACAGGAGGAAGAGATGTATTCAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR CAA 90 bp | TGTGTCTCATCTTCCTCCAGAAGAAACATAAACCCCAGGTCTGGCTaGAAGGAGCCTAAGGTTGAAGAAAATGAACTCAAGACAAACCAT | + |
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Preference number: 2 (lower is better) Translates to: CVSSSSRRNINPRSG*KEPKVEENELKTNH Trigger: ATGGTTTGTCTTGAGTTCATTTTCTTCAACCTTAGGCTCCTTCAAGCCAGACCTGGGGTTTATGTTTCTTCTGGAGGAAGATGAGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTATATTTTTTGGGTTCCAGAAATTaGAAGAAAAGTCAACACGGC | + |
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Preference number: 2 (lower is better) Translates to: WDWGVHQYTPGRSLVLYFLGSRN*KKSQHG Trigger: GCCGTGTTGACTTTTCTTTCAATTTCTGGAACCCAA...AAAATATAAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGTTGAATACATCTCTTCCTCCTGTCTTGTTGCTATGAGAAAGTTCTGTCTTACTCAAGACAAACCATaGAAGGCATCAAGGCGTCAA | + |
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Preference number: 2 (lower is better) Translates to: TVEYISSSCLVAMRKFCLTQDKP*KASRRQ Trigger: TTGACGCCTTGATGCCTTTCATGGTTTGTCTTGAGT...AAGACAGAACTTTCTCATAGCAACAAGACAGGAGGAAGAGATGTATTCAACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR CCA 72 bp | ACACATCAGGAATACAGCAGAGGGAGACTGCCACCGTaGGAGGTGCCCCCAGGGCAGAGCGCACAGCGGACA | + |
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Preference number: 3 (lower is better) Translates to: THQEYSRGRLPP*EVPPGQSAQRT Trigger: TGTCCGCTGTGCGCTCTGCCCTGGGGGCACCTCCCACGGTGGCAGTCTCCCTCTGCTGTATTCCTGATGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR GCA 72 bp | AGGGAGCAGAGGCTGGCCTTGAACTCCCGATTCTCTTaGCTCCACCTTCCAGGTGCTGGGATTGGGGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: REQRLALNSRFS*LHLPGAGIGVC Trigger: GCACACCCCAATCCCAGCACCTGGAAGGTGGAGGCAAGAGAATCGGGAGTTCAAGGCCAGCCTCTGCTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR GCA 72 bp | CGGGGGAGCTTCAGGGCCCAGAGCCAACTTAGCAAGTaGAGGCTCAGCCATCCTGAGAGTCTGCCAACTCTA | + |
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Preference number: 3 (lower is better) Translates to: RGSFRAQSQLSK*RLSHPESLPTL Trigger: TAGAGTTGGCAGACTCTCAGGATGGCTGAGCCTGCACTTGCTAAGTTGGCTCTGGGCCCTGAAGCTCCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR TCA 72 bp | AAAGGCATCAAGGCGTCAAGGCTCCCACCTGTTTCCTaGCCTCCATCCCCGAGAGCATACAGATGCCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: KGIKASRLPPVS*PPSPRAYRCLG Trigger: CCCGAGGCATCTGTATGCTCTCGGGGATGGAGGTCAGGAAACAGGTGGGAGCCTTGACGCCTTGATGCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CAA 90 bp | CACATTCTGGAGCTCCATTTGAAGAAGCCTAGACCCTTCCTCCGGAAGGACACTGGCAGATCCAAGACCTaGTGGGGGAGGCGGGACACA | + |
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Preference number: 3 (lower is better) Translates to: HILELHLKKPRPFLRKDTGRSKT*WGRRDT Trigger: TGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCC...AGTGTCCTTCCGGAGGAAGGGTCTAGGCTTCTTCAAATGGAGCTCCAGAATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR CCA 72 bp | CCGATTCTCTTGCCTCCACCTTCCAGGTGCTGGGATTaGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: PILLPPPSRCWD*GVHQYTPGRSL Trigger: AAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCTGGAAGGTGGAGGCAAGAGAATCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR GCA 72 bp | CTTGAACTCCCGATTCTCTTGCCTCCACCTTCCAGGTaGTGGGATTGGGGTGTGCACCAGTATACTCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LELPILLPPPSR*WDWGVHQYTPG Trigger: TCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCTGGAAGGTGGAGGCAAGAGAATCGGGAGTTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR CCA 72 bp | GGTTTAAAAGACCATACAGCTGCCAGAAGCCAGGGCTaGGAGCTGATTGTTGCCCTCTCTAGCCAGGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: GLKDHTAARSQG*ELIVALSSQEL Trigger: GAGCTCCTGGCTAGAGAGGGCAACAATCAGCTCCCAGCCCTGGCTTCTGGCAGCTGTATGGTCTTTTAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CAA 90 bp | CACATTCTGGAGCTCCATTTGAAGAAGCCTAGACCCTTCCTCCGGAAGGACACTGAGCAGAGGCTGGCCTaGAACTCCCGATTCTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: HILELHLKKPRPFLRKDTEQRLA*NSRFSC Trigger: GCAAGAGAATCGGGAGTTCAAGGCCAGCCTCTGCTC...AGTGTCCTTCCGGAGGAAGGGTCTAGGCTTCTTCAAATGGAGCTCCAGAATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR TCA 72 bp | ATCGGATGTGTCCCGTGCACATTCTGGAGCTCCATTTaGAGAAGCCTAGACCCTTCCTCCGGAAGGACACTG | + |
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Preference number: 3 (lower is better) Translates to: IGCVPCTFWSSI*RSLDPSSGRTL Trigger: CAGTGTCCTTCCGGAGGAAGGGTCTAGGCTTCTTCAAATGGAGCTCCAGAATGTGCACGGGACACATCCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR TCA 72 bp | ACCCCAGCTCCCCTGTATCTGTACCAGGGTCCTTTCTaGAACACAGTCTCACATAGTCTAGGCTACTATCCC | + |
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Preference number: 3 (lower is better) Translates to: TPAPLYLYQGPF*NTVSHSLGYYP Trigger: GGGATAGTAGCCTAGACTATGTGAGACTGTGTTTCAGAAAGGACCCTGGTACAGATACAGGGGAGCTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR GCA 72 bp | ATTCGGACTATCCAAAGGTTTAAAAGACCATACAGCTaGCAGAAGCCAGGGCTGGGAGCTGATTGTTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: IRTIQRFKRPYS*QKPGLGADCCP Trigger: AGGGCAACAATCAGCTCCCAGCCCTGGCTTCTGGCAGCTGTATGGTCTTTTAAACCTTTGGATAGTCCGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR TCA 72 bp | CTAGACCCTTCCTCCGGAAGGACACTGCTTTACTGTTaGATACATCTCTTCCTCCTGTCTTGTTGCTATGAG | + |
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Preference number: 3 (lower is better) Translates to: LDPSSGRTLLYC*IHLFLLSCCYE Trigger: CTCATAGCAACAAGACAGGAGGAAGAGATGTATTCAACAGTAAAGCAGTGTCCTTCCGGAGGAAGGGTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
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| 3UTR-3UTR CAA 90 bp | ATACTCCTGGAAGGAGCCTTGTTTTATATTTTGAGGAGAGCCAGAGAGATTCGGGTTGGGTTCCAGAAATaGAAAGAAAAGTCAACACGG | + |
|
Preference number: 3 (lower is better) Translates to: ILLEGALFYILRRAREIRVGFQK*KEKSTR Trigger: CCGTGTTGACTTTTCTTTCAATTTCTGGAACCCAAC...CCGAATCTCTCTGGCTCTCCTCAAAATATAAAACAAGGCTCCTTCCAGGAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTAAATATAGATCGGATGTGTCCCGTGCACATTCTGGAGCTCCATTTGAAGGACACTGCTTTACTGTaGAATACATCTCTTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLNIDRMCPVHILELHLKDTALL*NTSLPP Trigger: AGGAGGAAGAGATGTATTCAACAGTAAAGCAGTGTC...CTTCAAATGGAGCTCCAGAATGTGCACGGGACACATCCGATCTATATTTAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| 3UTR TCA 72 bp | CTGTTGAATACATCTCTTCCTCCTGTCTTGTTGCTATaGGAAAGTTCTGTCTTTTATAAAGCGATAGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLNTSLPPVLLL*ESSVFYKAIDD Trigger: GTCATCTATCGCTTTATAAAAGACAGAACTTTCTCATAGCAACAAGACAGGAGGAAGAGATGTATTCAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR GCA 90 bp | GGGACACATCAGGAATACAGCAGAGGGAGACTGCCACCGTGGGAGGTGCCCCCAGGACTGCAGGCACACTaGAAGCCAGGAACCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTHQEYSRGRLPPWEVPPGLQAH*KPGTKP Trigger: TGGCTTGGTTCCTGGCTTGCAGTGTGCCTGCAGTCC...TGGGGGCACCTCCCACGGTGGCAGTCTCCCTCTGCTGTATTCCTGATGTGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGTCCAGTCCACTGGTGCACAGAGGAAGGCAGATCCAAGACCTTGTGGGGAATCAGTGCCATCCTTaGGTGTCCCGCGACCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSSPLVHRGRQIQDLVGNQCHP*VSRDRP Trigger: GGGGCGGTCGCGGGACACCCAAGGATGGCACTGATT...CCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCAGTGGACTGGACAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGCACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAAATCAGTGCCATCCTTaGGTGTCCCGCGACCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WCTEEGRSKTLWGRRDTSNQCHP*VSRDRP Trigger: GGGGCGGTCGCGGGACACCCAAGGATGGCACTGATT...TGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCACTGGTGCACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGAGGACTGCAGGCACACTaGAAGCCAGGAACCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLVHRGRQIQDLVGEAGGLQAH*KPGTKP Trigger: TGGCTTGGTTCCTGGCTTGCAGTGTGCCTGCAGTCC...TCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCAGTGGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAAAGTCAACACGGCTGGCCTGAGCCGGGGGAGCTTCAGGGCCCAGAGCGGCACAGAGCCTCATTaGACAGAAGGAGTCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERKVNTAGLSRGSFRAQSGTEPH*TEGVVF Trigger: GAACACGACTCCTTCTGTCCAATGAGGCTCTGTGCC...GCTCTGGGCCCTGAAGCTCCCCCGGCTCAGGCCAGCCGTGTTGACTTTTCTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACTGGTGCACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACGGCACAGAGCCTCATTaGACAGAAGGAGTCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VHWCTEEGRSKTLWGRRDGTEPH*TEGVVF Trigger: GAACACGACTCCTTCTGTCCAATGAGGCTCTGTGCC...GTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCAGTGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAGGAATACGGACTGCAGGCACACTaGAAGCCAGGAACCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRKADPRPCGGGGTHQEYGLQAH*KPGTKP Trigger: TGGCTTGGTTCCTGGCTTGCAGTGTGCCTGCAGTCC...GTATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| 3UTR CAA 72 bp | GTCCACTGGTGCACAGAGGAAGGCAGATCCAAGACCTaGTGGGGGAGGCGGGACACATCAGGAATACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHWCTEEGRSKT*WGRRDTSGIQQ Trigger: CTGCTGTATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCAGTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| 3UTR CAA 72 bp | CCCGATTCTCTTGCCTCCACCTTCCAGGTGCTGGGATaGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PDSLASTFQVLG*GCAPVYSWKEP Trigger: AGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCTGGAAGGTGGAGGCAAGAGAATCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCACTGGTGCACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGATCTCAATCATGGACTTaGGTTCTAGCAAGCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLVHRGRQIQDLVGEAGSQSWT*VLASPL Trigger: CAGGGGGCTTGCTAGAACTCAAGTCCATGATTGAGA...TCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCAGTGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CCA 90 bp | CACATTCTGGAGCTCCATTTGAAGAAGCCTAGACCCTTCCTCCGGAAGGACACTAATCAGTGCCATCCTTaGGTGTCCCGCGACCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HILELHLKKPRPFLRKDTNQCHP*VSRDRP Trigger: GGGGCGGTCGCGGGACACCCAAGGATGGCACTGATT...AGTGTCCTTCCGGAGGAAGGGTCTAGGCTTCTTCAAATGGAGCTCCAGAATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAGGAATACAGCTCTCAATCATGGACTTaGGTTCTAGCAAGCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKADPRPCGGGGTHQEYSSQSWT*VLASPL Trigger: CAGGGGGCTTGCTAGAACTCAAGTCCATGATTGAGA...GCTGTATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| 3UTR CAA 72 bp | GATCGGATGTGTCCCGTGCACATTCTGGAGCTCCATTaGAAGAAGCCTAGACCCTTCCTCCGGAAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: DRMCPVHILELH*KKPRPFLRKDT Trigger: AGTGTCCTTCCGGAGGAAGGGTCTAGGCTTCTTCAAATGGAGCTCCAGAATGTGCACGGGACACATCCGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTGCTGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTTCTCAATCATGGACTTaGGTTCTAGCAAGCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVLGLGCAPVYSWKEPCFSQSWT*VLASPL Trigger: CAGGGGGCTTGCTAGAACTCAAGTCCATGATTGAGA...AAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAGGAATAAGTCGTGTTCGCAGATaGCTAGGCCATTTGTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TEEGRSKTLWGRRDTSGISRVRR*LGHLCI Trigger: GATACACAAATGGCCTAGTCATCTGCGAACACGACT...TATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CCA 90 bp | TGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTATATTTTAATCAGTGCCATCCTTaGGTGTCCCGCGACCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WDWGVHQYTPGRSLVLYFNQCHP*VSRDRP Trigger: GGGGCGGTCGCGGGACACCCAAGGATGGCACTGATT...AAAATATAAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGCTGGGATTGGGGTGTGCACCAGTATACTCCTGGAAGGAGCCTTGTTTTATCTCAATCATGGACTTaGGTTCTAGCAAGCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCWDWGVHQYTPGRSLVLSQSWT*VLASPL Trigger: CAGGGGGCTTGCTAGAACTCAAGTCCATGATTGAGA...TAAAACAAGGCTCCTTCCAGGAGTATACTGGTGCACACCCCAATCCCAGCACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGTGTCTCATCTTCCTCCAGAAGAAACATAAACCCCAGGTCTGGCTTGAAGGCACAGAGCCTCATTaGACAGAAGGAGTCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLCLIFLQKKHKPQVWLEGTEPH*TEGVVF Trigger: GAACACGACTCCTTCTGTCCAATGAGGCTCTGTGCC...TTCAAGCCAGACCTGGGGTTTATGTTTCTTCTGGAGGAAGATGAGACACAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| 3UTR CAA 72 bp | TCTTCCTCCAGAAGAAACATAAACCCCAGGTCTGGCTaGAAGGAGCCTAAGGTTGAAGAAAATGAACTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSRRNINPRSG*KEPKVEENELK Trigger: CTTGAGTTCATTTTCTTCAACCTTAGGCTCCTTCAAGCCAGACCTGGGGTTTATGTTTCTTCTGGAGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTGAATACATCTCTTCCTCCTGTCTTGTTGCTATGAGAAAGTTCTGTCTTAGGACTGGGTCCGAATaGCACAGTCTTTTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVEYISSSCLVAMRKFCLRTGSE*HSLFPP Trigger: TGGAGGAAAAAGACTGTGCCATTCGGACCCAGTCCT...AAGACAGAACTTTCTCATAGCAACAAGACAGGAGGAAGAGATGTATTCAACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGAAAAGTCAACACGGCTGGCCTGAGCCGGGGGAGCTTCAGGGCCCAGAGCAGGCACAGAGCCTCATaGGACAGAAGGAGTCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ERKVNTAGLSRGSFRAQSRHRAS*DRRSRV Trigger: AACACGACTCCTTCTGTCCAATGAGGCTCTGTGCCT...GCTCTGGGCCCTGAAGCTCCCCCGGCTCAGGCCAGCCGTGTTGACTTTTCTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCACTGGTGCACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGAAGGCACAGAGCCTCATaGGACAGAAGGAGTCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPLVHRGRQIQDLVGEAGRHRAS*DRRSRV Trigger: AACACGACTCCTTCTGTCCAATGAGGCTCTGTGCCT...TCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCAGTGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CAA 90 bp | ACCTTGTGGGGGAGGCGGGACACATCAGGAATACAGCAGAGGGAGACTGCCACCGTCTTTTTCCTCCAGTaGCCCATAACAACGGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLWGRRDTSGIQQRETATVFFLQ*PITTVV Trigger: CACGACCGTTGTTATGGGCAACTGGAGGAAAAAGAC...GGTGGCAGTCTCCCTCTGCTGTATTCCTGATGTGTCCCGCCTCCCCCACAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCACTGGTGCACAGAGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGATTCTCAATCATGGACTaGAGTTCTAGCAAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPLVHRGRQIQDLVGEAGFSIMD*SSSKPP Trigger: AGGGGGCTTGCTAGAACTCAAGTCCATGATTGAGAA...TCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCTCTGTGCACCAGTGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAGGAATACAGCAGGCACAGAGCCTCATaGGACAGAAGGAGTCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RKADPRPCGGGGTHQEYSRHRAS*DRRSRV Trigger: AACACGACTCCTTCTGTCCAATGAGGCTCTGTGCCT...GCTGTATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CAA 90 bp | GCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAGGAATACAGCAGAGGGTTCTCAATCATGGACTaGAGTTCTAGCAAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ADPRPCGGGGTHQEYSRGFSIMD*SSSKPP Trigger: AGGGGGCTTGCTAGAACTCAAGTCCATGATTGAGAA...CCCTCTGCTGTATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCAGATCCAAGACCTTGTGGGGGAGGCGGGACACATCAGGAATACAGCATTCTCAATCATGGACTaGAGTTCTAGCAAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRQIQDLVGEAGHIRNTAFSIMD*SSSKPP Trigger: AGGGGGCTTGCTAGAACTCAAGTCCATGATTGAGAA...TGCTGTATTCCTGATGTGTCCCGCCTCCCCCACAAGGTCTTGGATCTGCCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTGTGTCTCATCTTCCTCCAGAAGAAACATAAACCCCAGGTCTGGCTTGAATTCTCAATCATGGACTaGAGTTCTAGCAAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLCLIFLQKKHKPQVWLEFSIMD*SSSKPP Trigger: AGGGGGCTTGCTAGAACTCAAGTCCATGATTGAGAA...TTCAAGCCAGACCTGGGGTTTATGTTTCTTCTGGAGGAAGATGAGACACAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCCAGTAAAAGGTCTCTGGAGGGTGCTAATGACAGTTGGGTTCCAGAAATTAGGCACAGAGCCTCATaGGACAGAAGGAGTCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSKRSLEGANDSWVPEIRHRAS*DRRSRV Trigger: AACACGACTCCTTCTGTCCAATGAGGCTCTGTGCCT...AATTTCTGGAACCCAACTGTCATTAGCACCCTCCAGAGACCTTTTACTGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030524.14 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS CCA 72 bp | GGTCGTGCATCTGACAGCACCAATCAGTGCCATCCTTaGGTGTCCCGCGACCGCCCCAGCCACAGTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRASDSTNQCHP*VSRDRPSHSSS Trigger: GCTGCTACTGTGGCTGGGGCGGTCGCGGGACACCCAAGGATGGCACTGATTGGTGCTGTCAGATGCACGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS GCA 72 bp | CATAACAACGGTCGTGCATCTGACAGCACCAATCAGTaGCATCCTTGGGTGTCCCGCGACCGCCCCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HNNGRASDSTNQ*HPWVSRDRPSH Trigger: GTGGCTGGGGCGGTCGCGGGACACCCAAGGATGGCACTGATTGGTGCTGTCAGATGCACGACCGTTGTTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS CAA 72 bp | GGACTGGGTCCGAATGGCACAGTCTTTTTCCTCCAGTaGCCCATAACAACGGTCGTGCATCTGACAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GLGPNGTVFFLQ*PITTVVHLTAP Trigger: TGGTGCTGTCAGATGCACGACCGTTGTTATGGGCAACTGGAGGAAAAAGACTGTGCCATTCGGACCCAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS TCA 72 bp | AGAGCCTCATTGGACAGAAGGAGTCGTGTTCGCAGATaGCTAGGCCATTTGTGTATCTGTAGTCATAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: RASLDRRSRVRR*LGHLCICSHRT Trigger: AGTCCTATGACTACAGATACACAAATGGCCTAGTCATCTGCGAACACGACTCCTTCTGTCCAATGAGGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||
| CDS CCA 72 bp | CATTTGTGTATCTGTAGTCATAGGACTGGGTCCGAATaGCACAGTCTTTTTCCTCCAGTTGCCCATAACAAC | + |
|
Preference number: 6 (lower is better) Translates to: HLCICSHRTGSE*HSLFPPVAHNN Trigger: GTTGTTATGGGCAACTGGAGGAAAAAGACTGTGCCATTCGGACCCAGTCCTATGACTACAGATACACAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030524.14 ENSMUST00000102511.2 ENSMUST00000102512.11 ENSMUST00000102513.8 |
||