Pregenerated sensors for PLA2G4F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046971Ensembl transcript IDs: ENSMUST00000054651.8
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTaGATGCTTGGGTTCTTTCCAGAGGTCCTTCTGTGGTGGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: VRTAGSSAHSSVVKL*MLGFFPEVLLWWGW Trigger: CCACCCCCACCACAGAAGGACCTCTGGAAAGAACCCAAGCATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR CCA 90 bp | CCCAAGCACTCAGAGAGAGAGAGAGAGATACTGCCCCATCTTCTCTaGGAAGGAGAAGTGGAAAACAGAAAGTGTTTAAAGTCTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: PKHSEREREILPHLL*EGEVENRKCLKSSL Trigger: GAGGGAAGACTTTAAACACTTTCTGTTTTCCACTTCTCCTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCCAGAGGTCCTTCTGTaGTGGGGGTGGGGGTGCGCC | + |
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Preference number: 2 (lower is better) Translates to: CLFSTSLSPGVWSGSELGPEVLL*WGWGCA Trigger: GGCGCACCCCCACCCCCACCACAGAAGGACCTCTGG...GCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACGAGAGAGAGAGATACTaGCCCATCTTCTCTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LFSTSLSPGVWSGSELGHERERY*PIFSGK Trigger: CTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTC...GTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTTGGAACTCTGTTCTCTCCTaGACAGGACCCCCAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: KDSWFLSPQLCGEALNAWNSVLS*TGPPST Trigger: AGTGCTTGGGGGTCCTGTGCAGGAGAGAACAGAGTT...CCAAGCATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGAGATACTGCTCCCTCAGCATACTCTaGCTTAAGGTCCTCCATCAC | + |
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Preference number: 2 (lower is better) Translates to: VLSCTGPPSTQRERERYCSLSIL*LKVLHH Trigger: GTGATGGAGGACCTTAAGTCAGAGTATGCTGAGGGA...GCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR TCA 72 bp | GCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTaGATGCTTGGGTTCTTTCCAGAGGTCCTTCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: AGSSAHSSVVKL*MLGFFPEVLLW Trigger: CCACAGAAGGACCTCTGGAAAGAACCCAAGCATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR TCA 72 bp | TGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTaGGCAGCTGTAGTTCTGCATCAGTGTAAGGACAGC | + |
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Preference number: 3 (lower is better) Translates to: WSGSELGHSVEV*AAVVLHQCKDS Trigger: GCTGTCCTTACACTGATGCAGAACTACAGCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR CCA 72 bp | TTTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTaGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: FILHITESGGLE*VRAGPLCGSVS Trigger: GCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR CCA 72 bp | TGCTGTTTATTCTCCACATCACTGAGTCCGGGGGTTTaGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: CCLFSTSLSPGV*SGSELGHSVEV Trigger: CACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAAACAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR GCA 72 bp | GGACCCCCAAGCACTCAGAGAGAGAGAGAGAGATACTaGCCCATCTTCTCTGGGAAGGAGAAGTGGAAAACA | + |
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Preference number: 3 (lower is better) Translates to: GPPSTQRERERY*PIFSGKEKWKT Trigger: TGTTTTCCACTTCTCCTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGGGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR TCA 72 bp | AAGCTGCTGCCTGGCTCTCTACACCCCAATATAATATaGACTCTGTTCTCTCCTGCACAGGACCCCCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: KLLPGSLHPNII*TLFSPAQDPQA Trigger: TGCTTGGGGGTCCTGTGCAGGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAGCCAGGCAGCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR CCA 72 bp | TCAGAGAGAGAGAGAGAGATACTGCCCCATCTTCTCTaGGAAGGAGAAGTGGAAAACAGAAAGTGTTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: SEREREILPHLL*EGEVENRKCLK Trigger: CTTTAAACACTTTCTGTTTTCCACTTCTCCTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTCTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | TCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCGGGAAGTCCCTTGCCTaGCAGCCACTTTGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SGGLEWVRAGPLCGSVSSGKSLA*QPLWLE Trigger: CTCCAGCCAAAGTGGCTGGCAGGCAAGGGACTTCCC...GCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACCCCCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | TCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCGCTGCAGACTCGCTCTaGGGCATATTTAATGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SGGLEWVRAGPLCGSVSSAADSL*GIFNGA Trigger: GGCCCCATTAAATATGCCTCAGAGCGAGTCTGCAGC...GCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACCCCCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | TCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCGCCTTGGACGCCACCTaGTTCCTCTTGTCCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: SGGLEWVRAGPLCGSVSSALDAT*FLLSRN Trigger: ATTTCTGGACAAGAGGAAGCAGGTGGCGTCCAAGGC...GCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACCCCCGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | TGTTTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCACAGCCCGCTGCGGCTaGAGGACCAGTGGAAATGGC | + |
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Preference number: 4 (lower is better) Translates to: CLFSTSLSPGVWSGSELGTARCG*RTSGNG Trigger: GCCATTTCCACTGGTCCTGCAGCCGCAGCGGGCTGT...GCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | TGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCTGTAGTTCTGCATCAGCCTGGCTCCGAGGTTaGCTGCAGAGGCTGTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: WVRAGPLCGSVSSCSSASAWLRG*LQRLWL Trigger: AAGCCACAGCCTCTGCAGCCAACCTCGGAGCCAGGC...TGATGCAGAACTACAGCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | GGTTTGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCTGTAGTACAGATGCGGGGCTCTaGCCAGAAATGCAGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: GLEWVRAGPLCGSVSSCSTDAGL*PEMQQP Trigger: CGGCTGCTGCATTTCTGGCCAGAGCCCCGCATCTGT...ACTACAGCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | GTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGGCATCCCAATTTTACTaGTGCAGACTCGCTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VRGFGVGQSWATLWKCEQASQFY*CRLALR Trigger: CCTCAGAGCGAGTCTGCAGCAGTAAAATTGGGATGC...CTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACCCCCGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | AGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTTGGGTTCTTTCCAGAGGTCCTCCAGGCACTGCCAGCTaGATCTGCCTGGAGCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: SPQLCGEALNAWVLSRGPPGTAS*ICLEPN Trigger: GTTGGGCTCCAGGCAGATCCAGCTGGCAGTGCCTGG...AGGACCTCTGGAAAGAACCCAAGCATTCAGAGCTTCACCACAGAGCTGTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | AAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTTGGAGTCAAAGGACACAATaGGGTCCACAGCCCGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: KDSWFLSPQLCGEALNAWSQRTQ*GPQPAA Trigger: CGCAGCGGGCTGTGGACCTCATTGTGTCCTTTGACT...CCAAGCATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | TTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACGGTACCTGGTCACAGTaGAGAGCCTCACTCAATCCC | + |
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Preference number: 4 (lower is better) Translates to: LFSTSLSPGVWSGSELGHGTWSQ*RASLNP Trigger: GGGATTGAGTGAGGCTCTGCACTGTGACCAGGTACC...GTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | CTCTGTGGTGAAGCTCTGAATGCTTGGGTTCTTTCCAGAGGTCCTTCTGTGGTGAGAAGACCAAGCTCCTaGAGCCCAGCCAGGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: LCGEALNAWVLSRGPSVVRRPSS*SPARLP Trigger: CGGCAGCCTGGCTGGGCTGCAGGAGCTTGGTCTTCT...CACCACAGAAGGACCTCTGGAAAGAACCCAAGCATTCAGAGCTTCACCACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | GTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGAGATACTGCCTAAGAGACACCTGCTaGCCCTCCTCCAGGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: VLSCTGPPSTQRERERYCLRDTC*PSSRST Trigger: TGTGGACCTGGAGGAGGGCCAGCAGGTGTCTCTTAG...GCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | TTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACTCCATCTTGCTGGTCTaGGCTTCCAGCTCATCACTC | + |
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Preference number: 4 (lower is better) Translates to: LFSTSLSPGVWSGSELGHSILLV*ASSSSL Trigger: GAGTGATGAGCTGGAAGCTCAGACCAGCAAGATGGA...GTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | GGTTTGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCTGTAGTCCTTGGGCTCGTAGGTaGAATCCATCATGCCATAGG | + |
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Preference number: 4 (lower is better) Translates to: GLEWVRAGPLCGSVSSCSPWARR*NPSCHR Trigger: CCTATGGCATGATGGATTTCACCTACGAGCCCAAGG...ACTACAGCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | TTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACGAGAGGAGAGCAGGATaGTTGCCTTGTCCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LFSTSLSPGVWSGSELGHERRAG*LPCPSC Trigger: GCAAGATGGACAAGGCAAGCATCCTGCTCTCCTCTC...GTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | AGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTTGGGTTCTTTCCAGAGGTCCTATCCTAAGAGACACCTaGTGGCCCTCCTCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SPQLCGEALNAWVLSRGPILRDT*WPSSRS Trigger: GGACCTGGAGGAGGGCCAGCAGGTGTCTCTTAGGAT...AGGACCTCTGGAAAGAACCCAAGCATTCAGAGCTTCACCACAGAGCTGTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | CTCTGTGGTGAAGCTCTGAATGCTTGGGTTCTTTCCAGAGGTCCTTCTGTGGTGGCCTGCCAGCCACTTTaGCTGGAGAGTCCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LCGEALNAWVLSRGPSVVACQPL*LESPGH Trigger: ATGCCCTGGACTCTCCAGCCAAAGTGGCTGGCAGGC...CACCACAGAAGGACCTCTGGAAAGAACCCAAGCATTCAGAGCTTCACCACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | AGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTTGGGTTCTTTCCAGAGGTCCTTGGCTGCAGAGGCTGTaGCTTTTCATAGGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SPQLCGEALNAWVLSRGPWLQRL*LFIGPR Trigger: CCTGGGGCCTATGAAAAGCCACAGCCTCTGCAGCCA...AGGACCTCTGGAAAGAACCCAAGCATTCAGAGCTTCACCACAGAGCTGTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | AGCTGCTGTTTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCCCTGCAAAGCCTTCTaGGACCAGGATGGATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SCCLFSTSLSPGVWSGSEPCKAF*DQDGSL Trigger: CAGGGATCCATCCTGGTCCCAGAAGGCTTTGCAGGG...CTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAAACAGCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| 3UTR CAA 72 bp | CTGCTGTTTATTCTCCACATCACTGAGTCCGGGGGTTaGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LLFILHITESGG*EWVRAGPLCGS Trigger: ACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAAACAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | ATGAACTCTGTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGTCGTTAACTCCTCGTTaGGGGGCAGAGAGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: MNSVLSCTGPPSTQRERESLTPR*GAERRA Trigger: TGCTCTCCTCTCTGCCCCTCAACGAGGAGTTAACGA...CTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAACAGAGTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | TTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACCTCATACAGGCTGGCTaGAAAAGCACTTCCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: LFSTSLSPGVWSGSELGHLIQAG*KSTSPH Trigger: ATGTGGGGAAGTGCTTTTGCAGCCAGCCTGTATGAG...GTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | AGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTTGGGTTCTTTCCAGAGGTCCTCTGACCGTTTCTTGCTaGTCTGACAGCTTGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SPQLCGEALNAWVLSRGPLTVSC*SDSLAG Trigger: CCCTGCCAAGCTGTCAGACCAGCAAGAAACGGTCAG...AGGACCTCTGGAAAGAACCCAAGCATTCAGAGCTTCACCACAGAGCTGTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | TGTTTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCTCTTGCAGCTTTATGTaGAGCTTGGGGCTCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: CLFSTSLSPGVWSGSELGSCSFM*SLGLST Trigger: AGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGA...GCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | TTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACAGAGCTGCTCATGTCTaGCTTCATCCTAAGAGACAC | + |
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Preference number: 4 (lower is better) Translates to: LFSTSLSPGVWSGSELGHRAAHV*LHPKRH Trigger: GTGTCTCTTAGGATGAAGGCAGACATGAGCAGCTCT...GTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | TGTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTTGGCTGACCGTTTCTTaGTGGTCTGACAGCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: CKDSWFLSPQLCGEALNAWLTVS*WSDSLA Trigger: TGCCAAGCTGTCAGACCAGCAAGAAACGGTCAGCCA...AGCATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGATACTGCCCCATCTTCTCTGGGAAGGAGAAGTGGAAAACAACACCTGGGGCCAGGTaGGTGCGAAAGGTCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RERERYCPIFSGKEKWKTTPGAR*VRKVLL Trigger: CAACAGGACCTTTCGCACGCACCTGGCCCCAGGTGT...TGTTTTCCACTTCTCCTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | GTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGAGATACTGCAGCACTGGGTTCACGTaGAAGGTAAAGTTCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: VLSCTGPPSTQRERERYCSTGFT*KVKFTG Trigger: CCCAGTGAACTTTACCTTCCACGTGAACCCAGTGCT...GCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | GTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGGTATTCAAACTGCTTTaGGGACAGCATCCCAATTTT | + |
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Preference number: 4 (lower is better) Translates to: VRGFGVGQSWATLWKCEQVFKLL*GQHPNF Trigger: AAAATTGGGATGCTGTCCCCAAAGCAGTTTGAATAC...CTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACCCCCGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | CAGTGTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATGGTCTTCAGAGTCCTTaGGGTCCACCTCAATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QCKDSWFLSPQLCGEALNGLQSP*GPPQSL Trigger: CAAGGATTGAGGTGGACCCCAAGGACTCTGAAGACC...ATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGATACTGCCCCATCTTCTCTGGGAAGGAGAAGTGGAAAACACGGTCCAGAGCCAGCTaGAGGGCATGCCTGATAGTC | + |
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Preference number: 4 (lower is better) Translates to: RERERYCPIFSGKEKWKTRSRAS*RACLIV Trigger: GACTATCAGGCATGCCCTCCAGCTGGCTCTGGACCG...TGTTTTCCACTTCTCCTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | CAGTGTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATCTGTCTTGTCTCCAGTaGCTGTGCCCTGAATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: QCKDSWFLSPQLCGEALNLSCLQ*LCPEFS Trigger: TGAGAATTCAGGGCACAGTCACTGGAGACAAGACAG...ATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | TTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACGGTCTCATTCCATTCTaGATCACTGCTGTTAACCAC | + |
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Preference number: 4 (lower is better) Translates to: LFSTSLSPGVWSGSELGHGLIPF*ITAVNH Trigger: GTGGTTAACAGCAGTGATCCAGAATGGAATGAGACC...GTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | TGTTTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCTACTTCCAGCTCTTTTaGATCCTGCTGCCTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: CLFSTSLSPGVWSGSELGYFQLF*ILLPGE Trigger: TTCACCAGGCAGCAGGATCCAAAAGAGCTGGAAGTA...GCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGATACTGCCCCATCTTCTCTGGGAAGGAGAAGTGGAAAACAGGGCATAGATGGGGTATaGGTTCTGACCCTGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERERDTAPSSLGRRSGKQGIDGV*VLTLAD Trigger: GTCAGCCAGGGTCAGAACCCATACCCCATCTATGCC...CTGTTTTCCACTTCTCCTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | AGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTTGGGTTCTTTCCAGAGGTCCTAGATCTCATACAGGCTaGCTGCAAAAGCACTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPQLCGEALNAWVLSRGPRSHTG*LQKHFP Trigger: GGGGAAGTGCTTTTGCAGCCAGCCTGTATGAGATCT...AGGACCTCTGGAAAGAACCCAAGCATTCAGAGCTTCACCACAGAGCTGTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | CTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCTGCACAGGACCCCCAACCACTGTCCTTGTCTaGCTGGGGCTAACAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTPQYNMNSVLSCTGPPTTVLV*LGLTEA Trigger: GGCTTCTGTTAGCCCCAGTCAGACAAGGACAGTGGT...TGGGGGTCCTGTGCAGGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGATACTGCCCCATCTTCTCTGGGAAGGAGAAGTGGAAAACACCAGGACACCATTGGTaGCAACTTCAGATGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RERERYCPIFSGKEKWKTPGHHW*QLQMQA Trigger: CGCCTGCATCTGAAGTTGTCACCAATGGTGTCCTGG...TGTTTTCCACTTCTCCTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | CTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCTGCACAGGACCCCCACCAAGTCCCCAGAGCTaGTCATGTCTGCCTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTPQYNMNSVLSCTGPPPSPQS*SCLPSS Trigger: GGATGAAGGCAGACATGAGCAGCTCTGGGGACTTGG...TGGGGGTCCTGTGCAGGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTGCTGCCTGGCTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCCGAGCAGGGGTCCTCTaGCTCAGCAAACAGATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAAAWLSTPQYNMNSVLSRAGVL*LSKQIA Trigger: TGCTATCTGTTTGCTGAGGCAGAGGACCCCTGCTCG...GGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAGCCAGGCAGCAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCTGGCTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCTGCACAGCCAGCTGGAGGGCATaGCTGATAGTCTCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAWLSTPQYNMNSVLSCTASWRA*LIVSLL Trigger: CAACAAGGAGACTATCAGGCATGCCCTCCAGCTGGC...TGTGCAGGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAGCCAGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | TGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCTGTAGTTCTGCATCAGCAGGGTTTTCCTCCTaGTTCAGGAAATACTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: WVRAGPLCGSVSSCSSASAGFSS*FRKYSM Trigger: CATTGAGTATTTCCTGAACCAGGAGGAAAACCCTGC...TGATGCAGAACTACAGCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | TGTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTAGAGAAGGAACTCATTaGCGTGAAGAGTCTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKDSWFLSPQLCGEALNAREGTH*REESGR Trigger: CCTACCAGACTCTTCACGCCAATGAGTTCCTTCTCT...AGCATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | CTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCTGCACAGGACCCCCAATGTCCAGCACAGCCTaGGAGAAGGAACTCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTPQYNMNSVLSCTGPPMSSTA*EKELIG Trigger: GCCAATGAGTTCCTTCTCTCAGGCTGTGCTGGACAT...TGGGGGTCCTGTGCAGGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATACTTGGAGCTGTTCTTaGAGCTTTATGTGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCKDSWFLSPQLCGEALNTWSCS*SFMCSL Trigger: CAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGT...ATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCTGGCTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCTGCACAACATGCTGTGTCCCCTaGTCTCCCAGGCTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAWLSTPQYNMNSVLSCTTCCVP*SPRLSF Trigger: AAAAGAGAGCCTGGGAGAGCAGGGGACACAGCATGT...TGTGCAGGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAGCCAGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGATACTGCCCCATCTTCTCTGGGAAGGAGAAGTGGAAAACACTTGGGGCTCAGCACTaGGTTCACGTGGAAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RERERYCPIFSGKEKWKTLGAQH*VHVEGK Trigger: TTTACCTTCCACGTGAACCCAGTGCTGAGCCCCAAG...TGTTTTCCACTTCTCCTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTGCTGCCTGGCTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCAGCCAAAGAGTTCCGTaGGAACGTAAGCCCCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EAAAWLSTPQYNMNSVLSSQRVP*ERKPRT Trigger: AGTACGGGGCTTACGTTCCCACGGAACTCTTTGGCT...GGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAGCCAGGCAGCAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | GTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGAGATACTGCGTAAAGTTAAAGGTCTaGGCACAAGTAATACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLSCTGPPSTQRERERYCVKLKV*AQVIRE Trigger: CTCCCGTATTACTTGTGCCCAGACCTTTAACTTTAC...GCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGATACTGCCCCATCTTCTCTGGGAAGGAGAAGTGGAAAACATGCGAAAGGTCCTGTTaGCAAGAGGGAAATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RERERYCPIFSGKEKWKTCERSC*QEGNAA Trigger: TGCTGCATTTCCCTCTTGTCAACAGGACCTTTCGCA...TGTTTTCCACTTCTCCTTCCCAGAGAAGATGGGGCAGTATCTCTCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CCA 90 bp | TGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCTGTAGTTCTGCATCATCGTGTCAAACAGAATaGAGAAGACATTGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: WVRAGPLCGSVSSCSSASSCQTE*RRHCHC Trigger: ACAGTGACAATGTCTTCTCCATTCTGTTTGACACGA...TGATGCAGAACTACAGCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR TCA 90 bp | CAGTGTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATGTATCCATAGTTATGTaGATGCCATGCATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCKDSWFLSPQLCGEALNVSIVM*MPCIFR Trigger: TCTGAAGATGCATGGCATTCACATAACTATGGATAC...ATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTACACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 90 bp | CCACCCCCAGAGCCTAACACGGCTACCACAGGTACCTGGTCACAGTaGAGAGCCTCACTCAATCCCATCACCCGCTGCAGGGCCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PPPEPNTATTGTWSQ*RASLNPITRCRALD Trigger: GTCCAAGGCCCTGCAGCGGGTGATGGGATTGAGTGAGGCTCTGCACTGTGACCAGGTACCTGTGGTAGCCGTGTTAGGCTCTGGGGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | CCCCCAACCCTTCCCCCAGCCTGCCGCCGCCGGTCCAGAGCCAGCTaGAGGGCATGCCTGATAGTCTCCTTGTTGTTCAAGACGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PPTLPPACRRRSRAS*RACLIVSLLFKTLY Trigger: ATACAACGTCTTGAACAACAAGGAGACTATCAGGCATGCCCTCCAGCTGGCTCTGGACCGGCGGCGGCAGGCTGGGGGAAGGGTTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 90 bp | TTTGTCGTTCCACACCTGGGGCCAGGTGCGTGCGAAAGGTCCTGTTaGCAAGAGGGAAATGCAGCACGATGGGCGAGCAGGGGTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FVVPHLGPGACERSC*QEGNAARWASRGPL Trigger: CAGAGGACCCCTGCTCGCCCATCGTGCTGCATTTCCCTCTTGTCAACAGGACCTTTCGCACGCACCTGGCCCCAGGTGTGGAACGACAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | CTGCCTCAGCAAACAGATAGCATTCACGGGGGTCTTCAGAGTCCTTaGGGTCCACCTCAATCCTTGGGAAGGGGATCCCTCGGTCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPQQTDSIHGGLQSP*GPPQSLGRGSLGPG Trigger: GCCGGGACCGAGGGATCCCCTTCCCAAGGATTGAGGTGGACCCCAAGGACTCTGAAGACCCCCGTGAATGCTATCTGTTTGCTGAGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 90 bp | GTCAAAACCAAGGCGCAGGTCCAAGTCCCCAGAGCTGCTCATGTCTaGCTTCATCCTAAGAGACACCTGCTGGCCCTCCTCCAGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKTKAQVQVPRAAHV*LHPKRHLLALLQVH Trigger: GTGGACCTGGAGGAGGGCCAGCAGGTGTCTCTTAGGATGAAGGCAGACATGAGCAGCTCTGGGGACTTGGACCTGCGCCTTGGTTTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 90 bp | CCTGCTGGCCCTCCTCCAGGTCCACAAGTTTCGTTAACTCCTCGTTaGGGGGCAGAGAGGAGAGCAGGATGCTTGCCTTGTCCATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGPPPGPQVSLTPR*GAERRAGCLPCPSC Trigger: GCAAGATGGACAAGGCAAGCATCCTGCTCTCCTCTCTGCCCCTCAACGAGGAGTTAACGAAACTTGTGGACCTGGAGGAGGGCCAGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 90 bp | GGTAACAGATGCGGGGCTCTGGCCAGAAATGCAGCAGCCGGCCCATaGAGAATTCAGAGCCAAAGAGTTCCGTGGGAACGTAAGCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GNRCGALARNAAAGP*RIQSQRVPWERKPR Trigger: ACGGGGCTTACGTTCCCACGGAACTCTTTGGCTCTGAATTCTTCATGGGCCGGCTGCTGCATTTCTGGCCAGAGCCCCGCATCTGTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 90 bp | GCAGGACCTCAAAAGGGCCTTCCAAGGAATAGTCAAAGGACACAATaGGGTCCACAGCCCGCTGCGGCTGCAGGACCAGTGGAAATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGPQKGLPRNSQRTQ*GPQPAAAAGPVEMA Trigger: CGCCATTTCCACTGGTCCTGCAGCCGCAGCGGGCTGTGGACCTCATTGTGTCCTTTGACTATTCCTTGGAAGGCCCTTTTGAGGTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | TCTTGCAGCTTTATGTGCAGCTTGGGGCTCAGCACTGGGTTCACGTaGAAGGTAAAGTTCACTGGGAGGCCTGGCTCCGAGGTTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSFMCSLGLSTGFT*KVKFTGRPGSEVGC Trigger: GCAGCCAACCTCGGAGCCAGGCCTCCCAGTGAACTTTACCTTCCACGTGAACCCAGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | ACGGGAGGTGAATATGTCCAGCACAGCCTGAGAGAAGGAACTCATTaGCGTGAAGAGTCTGGTAGGCAGCCGTGTGGGGTCCTGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGGEYVQHSLREGTH*REESGRQPCGVLLP Trigger: CGGAAGCAGGACCCCACACGGCTGCCTACCAGACTCTTCACGCCAATGAGTTCCTTCTCTCAGGCTGTGCTGGACATATTCACCTCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | GTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGAGATACTGCCCAAGGGAGGCTGTCTaGTCTCCAGTGACTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSCTGPPSTQRERERYCPREAV*SPVTVP Trigger: GGGCACAGTCACTGGAGACAAGACAGCCTCCCTTGG...GCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | AAAGTCCCCGAAGGCCTTCTCCTCAGCTGTTTGTCGTTCCACACCTaGGGCCAGGTGCGTGCGAAAGGTCCTGTTGACAAGAGGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: KVPEGLLLSCLSFHT*GQVRAKGPVDKREM Trigger: CATTTCCCTCTTGTCAACAGGACCTTTCGCACGCACCTGGCCCCAGGTGTGGAACGACAAACAGCTGAGGAGAAGGCCTTCGGGGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | TCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCAGAATGGAGAAGACATaGTCACTGTCCAGGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: SGGLEWVRAGPLCGSVSSRMEKT*SLSRTS Trigger: GGATGTCCTGGACAGTGACAATGTCTTCTCCATTCT...GCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCACTCCAAACCCCCGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | AGCTGCTGTTTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGGGTCCACCTCAATCCTaGGGAAGGGGATCCCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCCLFSTSLSPGVWSGSEGPPQS*GRGSLG Trigger: ACCGAGGGATCCCCTTCCCAAGGATTGAGGTGGACC...CTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAAACAGCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 90 bp | TCCAGCTCATCACTCGGGCCACTATGGAAGACTTGGAGCTGTTCTTaGAGCTTTATGTGCAGCTTGGGGCTCAGCACTGGGTTCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSLGPLWKTWSCS*SFMCSLGLSTGFTW Trigger: CCACGTGAACCCAGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTTCCATAGTGGCCCGAGTGATGAGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 90 bp | TTCCGTAACTTTGGCCAGTCATCTGTGACACTGACACTCCCCCTGTaGCAGTCCAGAAAGCTCAGGCTTAGGCCTCCCAGCTTCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FRNFGQSSVTLTLPL*QSRKLRLRPPSFRK Trigger: CTTCCTGAAGCTGGGAGGCCTAAGCCTGAGCTTTCTGGACTGGCACAGGGGGAGTGTCAGTGTCACAGATGACTGGCCAAAGTTACGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 90 bp | GTTGACAAGAGGGAAATGCAGCACGATGGGCGAGCAGGGGTCCTCTaGCTCAGCAAACAGATAGCATTCACGGGGGTCTTCAGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VDKREMQHDGRAGVL*LSKQIAFTGVFRVL Trigger: AAGGACTCTGAAGACCCCCGTGAATGCTATCTGTTTGCTGAGGCAGAGGACCCCTGCTCGCCCATCGTGCTGCATTTCCCTCTTGTCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | TTGGAGCTGTTCTTGCAGCTTTATGTGCAGCTTGGGGCTCAGCACTaGGTTCACGTGGAAGGTAAAGTTCACTGGGAGGCCTGGCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LELFLQLYVQLGAQH*VHVEGKVHWEAWLR Trigger: TCGGAGCCAGGCCTCCCAGTGAACTTTACCTTCCACGTGAACCCAGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | TCCCCAGAGCTGCTCATGTCTGCCTTCATCCTAAGAGACACCTGCTaGCCCTCCTCCAGGTCCACAAGTTTCGTTAACTCCTCGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPELLMSAFILRDTC*PSSRSTSFVNSSLR Trigger: CCTCAACGAGGAGTTAACGAAACTTGTGGACCTGGAGGAGGGCCAGCAGGTGTCTCTTAGGATGAAGGCAGACATGAGCAGCTCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | GTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGAGATACTGCAGGAGAGCAGGATGCTaGCCTTGTCCATCTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLSCTGPPSTQRERERYCRRAGC*PCPSCW Trigger: CCAGCAAGATGGACAAGGCAAGCATCCTGCTCTCCT...GCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | ATGAACTCTGTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGTGCTGGTCTGACAGCTaGGCAGGGTTTTCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MNSVLSCTGPPSTQRERECWSDS*AGFSSW Trigger: CCAGGAGGAAAACCCTGCCAAGCTGTCAGACCAGCA...CTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAACAGAGTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 90 bp | AAGTCCCCAGAGCTGCTCATGTCTGCCTTCATCCTAAGAGACACCTaGTGGCCCTCCTCCAGGTCCACAAGTTTCGTTAACTCCTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSPELLMSAFILRDT*WPSSRSTSFVNSSL Trigger: CAACGAGGAGTTAACGAAACTTGTGGACCTGGAGGAGGGCCAGCAGGTGTCTCTTAGGATGAAGGCAGACATGAGCAGCTCTGGGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | AGCTCAGGCTTAGGCCTCCCAGCTTCAGGAAGATCTCATACAGGCTaGCTGCAAAAGCACTTCCCCACATACCCTGCAGGTAACAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSGLGLPASGRSHTG*LQKHFPTYPAGNRC Trigger: GCATCTGTTACCTGCAGGGTATGTGGGGAAGTGCTTTTGCAGCCAGCCTGTATGAGATCTTCCTGAAGCTGGGAGGCCTAAGCCTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | GTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGAGATACTGCCCTCAGCACCTTCACTaGAAGGTCGTAGTATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLSCTGPPSTQRERERYCPQHLH*KVVVWV Trigger: CACCCATACTACGACCTTCAAGTGAAGGTGCTGAGG...GCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | CAGTGTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATAGCTTTATGTGCAGCTaGGGGCTCAGCACTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QCKDSWFLSPQLCGEALNSFMCS*GLSTGF Trigger: GAACCCAGTGCTGAGCCCCAAGCTGCACATAAAGCT...ATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | TGTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTTTCGTTAACTCCTCGTaGAGGGGCAGAGAGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CKDSWFLSPQLCGEALNAFVNSS*RGREES Trigger: GCTCTCCTCTCTGCCCCTCAACGAGGAGTTAACGAA...AGCATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | TGTAAGGACAGCTGGTTCCTCAGCCCACAGCTCTGTGGTGAAGCTCTGAATGCTGGGTCTTCAGAGTCCTaGGGGTCCACCTCAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CKDSWFLSPQLCGEALNAGSSES*GSTSIL Trigger: AAGGATTGAGGTGGACCCCAAGGACTCTGAAGACCC...AGCATTCAGAGCTTCACCACAGAGCTGTGGGCTGAGGAACCAGCTGTCCTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | GTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGAGATACTGCGTGCGAAAGGTCCTGTaGACAAGAGGGAAATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLSCTGPPSTQRERERYCVRKVL*TRGKCS Trigger: GCTGCATTTCCCTCTTGTCAACAGGACCTTTCGCAC...GCAGTATCTCTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 90 bp | GTCTGGGCACAAGTAATACGGGAGGTGAATATGTCCAGCACAGCCTaGGAGAAGGAACTCATTGGCGTGAAGAGTCTGGTAGGCAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VWAQVIREVNMSSTA*EKELIGVKSLVGSR Trigger: ACGGCTGCCTACCAGACTCTTCACGCCAATGAGTTCCTTCTCTCAGGCTGTGCTGGACATATTCACCTCCCGTATTACTTGTGCCCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 90 bp | CTCGGGCCACTATGGAAGACTTGGAGCTGTTCTTGCAGCTTTATGTaGAGCTTGGGGCTCAGCACTGGGTTCACGTGGAAGGTAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGPLWKTWSCSCSFM*SLGLSTGFTWKVKF Trigger: GAACTTTACCTTCCACGTGAACCCAGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTTCCATAGTGGCCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 90 bp | GATGGGGTATGGGTTCTGACCCTGGCTGACCGTTTCTTGCTGGTCTaGCAGCTTGGCAGGGTTTTCCTCCTGGTTCAGGAAATACTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DGVWVLTLADRFLLV*QLGRVFLLVQEILN Trigger: ATTGAGTATTTCCTGAACCAGGAGGAAAACCCTGCCAAGCTGTCAGACCAGCAAGAAACGGTCAGCCAGGGTCAGAACCCATACCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | TATGCTTCCATTGTGGTTCGCTCTTTTCTGTCTTCCGTAGCAGTATaGCTCCAAGAAGGGGAAGTCCCTTGCCTGCCAGCCACTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YASIVVRSFLSSVAV*LQEGEVPCLPATLA Trigger: AGCCAAAGTGGCTGGCAGGCAAGGGACTTCCCCTTCTTGGAGCCATACTGCTACGGAAGACAGAAAAGAGCGAACCACAATGGAAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | TTCCTTGGGCTCGTAGGTGAAATCCATCATGCCATAGGCAGTATCTaGCCCGTTGATGATAAAGTCCCCGAAGGCCTTCTCCTCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLGLVGEIHHAIGSI*PVDDKVPEGLLLSC Trigger: ACAGCTGAGGAGAAGGCCTTCGGGGACTTTATCATCAACGGGCCAGATACTGCCTATGGCATGATGGATTTCACCTACGAGCCCAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | TGGGTCAGAGCTGGGCCACTCTGTGGAAGTGTGAGCAGCTGTAGTTCTGCATCAAGTGGAAATGGCGAGTaGATAGCAAAGCCTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: WVRAGPLCGSVSSCSSASSGNGE*IAKPPS Trigger: AGATGGAGGCTTTGCTATCAACTCGCCATTTCCACT...TGATGCAGAACTACAGCTGCTCACACTTCCACAGAGTGGCCCAGCTCTGACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS-3UTR CAA 90 bp | GAAGCTGCTGCCTGGCTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCCTTCTCCTCAGCTGTTaGTCGTTCCACACCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAAAWLSTPQYNMNSVLSLLLSC*SFHTWG Trigger: GCCCCAGGTGTGGAACGACAAACAGCTGAGGAGAAG...GGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAGCCAGGCAGCAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS-3UTR CAA 90 bp | TTATTCTCCACATCACTGAGTCCGGGGGTTTGGAGTGGGTCAGAGCTGGGCCACCTGATAGTCTCCTTGTaGTTCAAGACGTTGTATCGG | + |
|
Preference number: 5 (lower is better) Translates to: LFSTSLSPGVWSGSELGHLIVSL*FKTLYR Trigger: CCGATACAACGTCTTGAACAACAAGGAGACTATCAG...GTGGCCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 90 bp | CTGACCGTTTCTTGCTGGTCTGACAGCTTGGCAGGGTTTTCCTCCTaGTTCAGGAAATACTCAATGATGAGGCCCCACAAGTCAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTVSCWSDSLAGFSS*FRKYSMMRPHKSVK Trigger: CTTCACTGACTTGTGGGGCCTCATCATTGAGTATTTCCTGAACCAGGAGGAAAACCCTGCCAAGCTGTCAGACCAGCAAGAAACGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS-3UTR CAA 90 bp | ATGAACTCTGTTCTCTCCTGCACAGGACCCCCAAGCACTCAGAGAGAGAGAGAGGACTTGGAGCTGTTCTaGCAGCTTTATGTGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MNSVLSCTGPPSTQREREDLELF*QLYVQL Trigger: AAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTC...CTCTCTCTCTCTCTGAGTGCTTGGGGGTCCTGTGCAGGAGAGAACAGAGTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS CCA 90 bp | CATAGCAGTCGGCTTTGGACAACTTATCTGTGTGCTGGATGTTTCTaGCCCTCAGCACCTTCACTTGAAGGTCGTAGTATGGGTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSSRLWTTYLCAGCF*PSAPSLEGRSMGGF Trigger: AAACCCACCCATACTACGACCTTCAAGTGAAGGTGCTGAGGGCCAGAAACATCCAGCACACAGATAAGTTGTCCAAAGCCGACTGCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCTGCACAGGACCCCCAGCCACCAGGACACCATaGGTGACAACTTCAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSTPQYNMNSVLSCTGPPATRTP*VTTSDA Trigger: TGCATCTGAAGTTGTCACCAATGGTGTCCTGGTGGC...TGGGGGTCCTGTGCAGGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTGGCTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCTGCACAGCCACCTGCTTCCTCTaGTCCAGAAATTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAWLSTPQYNMNSVLSCTATCFL*SRNSCS Trigger: AGAGCAGGAATTTCTGGACAAGAGGAAGCAGGTGGC...TGTGCAGGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAGCCAGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCTGCTGCCTGGCTCTCTACACCCCAATATAATATGAACTCTGTTCTCTCCTCCCCACTGATGTTTTaGTGGACATTAATGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EAAAWLSTPQYNMNSVLSSPLMF*WTLMLA Trigger: TGCCAGCATTAATGTCCACAAAAACATCAGTGGGGA...GGAGAGAACAGAGTTCATATTATATTGGGGTGTAGAGAGCCAGGCAGCAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS CCA 72 bp | CTTCCCCCAGCCTGCCGCCGCCGGTCCAGAGCCAGCTaGAGGGCATGCCTGATAGTCTCCTTGTTGTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPPACRRRSRAS*RACLIVSLLFK Trigger: CTTGAACAACAAGGAGACTATCAGGCATGCCCTCCAGCTGGCTCTGGACCGGCGGCGGCAGGCTGGGGGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 72 bp | CCACACCTGGGGCCAGGTGCGTGCGAAAGGTCCTGTTaGCAAGAGGGAAATGCAGCACGATGGGCGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHLGPGACERSC*QEGNAARWASR Trigger: CCTGCTCGCCCATCGTGCTGCATTTCCCTCTTGTCAACAGGACCTTTCGCACGCACCTGGCCCCAGGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS CAA 90 bp | GTTTGTCGTTCCACACCTGGGGCCAGGTGCGTGCGAAAGGTCCTGTaGACAAGAGGGAAATGCAGCACGATGGGCGAGCAGGGGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VCRSTPGARCVRKVL*TRGKCSTMGEQGSS Trigger: AGAGGACCCCTGCTCGCCCATCGTGCTGCATTTCCCTCTTGTCAACAGGACCTTTCGCACGCACCTGGCCCCAGGTGTGGAACGACAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS CAA 90 bp | CGCCGCCGGTCCAGAGCCAGCTGGAGGGCATGCCTGATAGTCTCCTaGTTGTTCAAGACGTTGTATCGGCTCAGGGTCACCAGCCGATCA | + |
|
Preference number: 6 (lower is better) Translates to: RRRSRASWRACLIVS*LFKTLYRLRVTSRS Trigger: TGATCGGCTGGTGACCCTGAGCCGATACAACGTCTTGAACAACAAGGAGACTATCAGGCATGCCCTCCAGCTGGCTCTGGACCGGCGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 72 bp | TCCGTAGCAGTATGGCTCCAAGAAGGGGAAGTCCCTTaGCTGCCAGCCACTTTGGCTGGAGAGTCCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVAVWLQEGEVP*LPATLAGESRA Trigger: TGCCCTGGACTCTCCAGCCAAAGTGGCTGGCAGGCAAGGGACTTCCCCTTCTTGGAGCCATACTGCTACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS GCA 72 bp | GAGCCTAACACGGCTACCACAGGTACCTGGTCACAGTaGAGAGCCTCACTCAATCCCATCACCCGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EPNTATTGTWSQ*RASLNPITRCR Trigger: CCTGCAGCGGGTGATGGGATTGAGTGAGGCTCTGCACTGTGACCAGGTACCTGTGGTAGCCGTGTTAGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS GCA 72 bp | AGGTGCGTGCGAAAGGTCCTGTTGACAAGAGGGAAATaGAGCACGATGGGCGAGCAGGGGTCCTCTGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RCVRKVLLTRGK*STMGEQGSSAS Trigger: TGAGGCAGAGGACCCCTGCTCGCCCATCGTGCTGCATTTCCCTCTTGTCAACAGGACCTTTCGCACGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 72 bp | GCCTGCCGCCGCCGGTCCAGAGCCAGCTGGAGGGCATaGCTGATAGTCTCCTTGTTGTTCAAGACGTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ACRRRSRASWRA*LIVSLLFKTLY Trigger: ATACAACGTCTTGAACAACAAGGAGACTATCAGGCATGCCCTCCAGCTGGCTCTGGACCGGCGGCGGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | CCACCCCCAGAGCCTAACACGGCTACCACAGGTACCTaGTCACAGTGCAGAGCCTCACTCAATCCCATCACC | + |
|
Preference number: 6 (lower is better) Translates to: PPPEPNTATTGT*SQCRASLNPIT Trigger: GGTGATGGGATTGAGTGAGGCTCTGCACTGTGACCAGGTACCTGTGGTAGCCGTGTTAGGCTCTGGGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 72 bp | TGCGGGGCTCTGGCCAGAAATGCAGCAGCCGGCCCATaGAGAATTCAGAGCCAAAGAGTTCCGTGGGAACGT | + |
|
Preference number: 6 (lower is better) Translates to: CGALARNAAAGP*RIQSQRVPWER Trigger: ACGTTCCCACGGAACTCTTTGGCTCTGAATTCTTCATGGGCCGGCTGCTGCATTTCTGGCCAGAGCCCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 72 bp | TTTGGCCAGTCATCTGTGACACTGACACTCCCCCTGTaGCAGTCCAGAAAGCTCAGGCTTAGGCCTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FGQSSVTLTLPL*QSRKLRLRPPS Trigger: GCTGGGAGGCCTAAGCCTGAGCTTTCTGGACTGGCACAGGGGGAGTGTCAGTGTCACAGATGACTGGCCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 72 bp | AGGGAAATGCAGCACGATGGGCGAGCAGGGGTCCTCTaGCTCAGCAAACAGATAGCATTCACGGGGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: REMQHDGRAGVL*LSKQIAFTGVF Trigger: GAAGACCCCCGTGAATGCTATCTGTTTGCTGAGGCAGAGGACCCCTGCTCGCCCATCGTGCTGCATTTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | TCCCCACATACCCTGCAGGTAACAGATGCGGGGCTCTaGCCAGAAATGCAGCAGCCGGCCCATGAAGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: SPHTLQVTDAGL*PEMQQPAHEEF Trigger: GAATTCTTCATGGGCCGGCTGCTGCATTTCTGGCCAGAGCCCCGCATCTGTTACCTGCAGGGTATGTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | GAAGGCCTTCTCCTCAGCTGTTTGTCGTTCCACACCTaGGGCCAGGTGCGTGCGAAAGGTCCTGTTGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: EGLLLSCLSFHT*GQVRAKGPVDK Trigger: CTTGTCAACAGGACCTTTCGCACGCACCTGGCCCCAGGTGTGGAACGACAAACAGCTGAGGAGAAGGCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 72 bp | GCCCGCTGCGGCTGCAGGACCAGTGGAAATGGCGAGTaGATAGCAAAGCCTCCATCTACTAGGGACAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ARCGCRTSGNGE*IAKPPSTRDRK Trigger: CTTCCTGTCCCTAGTAGATGGAGGCTTTGCTATCAACTCGCCATTTCCACTGGTCCTGCAGCCGCAGCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 90 bp | AGGTCCACAGCCCGCTGCGGCTGCAGGACCAGTGGAAATGGCGAGTaGATAGCAAAGCCTCCATCTACTAGGGACAGGAAGTCCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: RSTARCGCRTSGNGE*IAKPPSTRDRKSFM Trigger: CATGAAGGACTTCCTGTCCCTAGTAGATGGAGGCTTTGCTATCAACTCGCCATTTCCACTGGTCCTGCAGCCGCAGCGGGCTGTGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 90 bp | CGCCGGTCCAGAGCCAGCTGGAGGGCATGCCTGATAGTCTCCTTGTaGTTCAAGACGTTGTATCGGCTCAGGGTCACCAGCCGATCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RRSRASWRACLIVSL*FKTLYRLRVTSRSN Trigger: ATTTGATCGGCTGGTGACCCTGAGCCGATACAACGTCTTGAACAACAAGGAGACTATCAGGCATGCCCTCCAGCTGGCTCTGGACCGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 72 bp | TGCTGGCATAGATGGGGTATGGGTTCTGACCCTGGCTaGCCGTTTCTTGCTGGTCTGACAGCTTGGCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CWHRWGMGSDPG*PFLAGLTAWQG Trigger: ACCCTGCCAAGCTGTCAGACCAGCAAGAAACGGTCAGCCAGGGTCAGAACCCATACCCCATCTATGCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 72 bp | CAAAAGGGCCTTCCAAGGAATAGTCAAAGGACACAATaGGGTCCACAGCCCGCTGCGGCTGCAGGACCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QKGLPRNSQRTQ*GPQPAAAAGPV Trigger: CACTGGTCCTGCAGCCGCAGCGGGCTGTGGACCTCATTGTGTCCTTTGACTATTCCTTGGAAGGCCCTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | TTTATGTGCAGCTTGGGGCTCAGCACTGGGTTCACGTaGAAGGTAAAGTTCACTGGGAGGCCTGGCTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: FMCSLGLSTGFT*KVKFTGRPGSE Trigger: CTCGGAGCCAGGCCTCCCAGTGAACTTTACCTTCCACGTGAACCCAGTGCTGAGCCCCAAGCTGCACATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | AATGAGGTCCACAGCCCGCTGCGGCTGCAGGACCAGTaGAAATGGCGAGTTGATAGCAAAGCCTCCATCTAC | + |
|
Preference number: 6 (lower is better) Translates to: NEVHSPLRLQDQ*KWRVDSKASIY Trigger: GTAGATGGAGGCTTTGCTATCAACTCGCCATTTCCACTGGTCCTGCAGCCGCAGCGGGCTGTGGACCTCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 72 bp | GATGATAAAGTCCCCGAAGGCCTTCTCCTCAGCTGTTaGTCGTTCCACACCTGGGGCCAGGTGCGTGCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: DDKVPEGLLLSC*SFHTWGQVRAK Trigger: TTTCGCACGCACCTGGCCCCAGGTGTGGAACGACAAACAGCTGAGGAGAAGGCCTTCGGGGACTTTATCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 90 bp | GCTGGTCTGAGCTTCCAGCTCATCACTCGGGCCACTATGGAAGACTaGGAGCTGTTCTTGCAGCTTTATGTGCAGCTTGGGGCTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGLSFQLITRATMED*ELFLQLYVQLGAQH Trigger: GTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTTCCATAGTGGCCCGAGTGATGAGCTGGAAGCTCAGACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 90 bp | GCCAGCTGGAGGGCATGCCTGATAGTCTCCTTGTTGTTCAAGACGTaGTATCGGCTCAGGGTCACCAGCCGATCAAATTCCTTGGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ASWRACLIVSLLFKT*YRLRVTSRSNSLGS Trigger: CGAGCCCAAGGAATTTGATCGGCTGGTGACCCTGAGCCGATACAACGTCTTGAACAACAAGGAGACTATCAGGCATGCCCTCCAGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 72 bp | CCTCCTCCAGGTCCACAAGTTTCGTTAACTCCTCGTTaGGGGGCAGAGAGGAGAGCAGGATGCTTGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PPPGPQVSLTPR*GAERRAGCLPC Trigger: ACAAGGCAAGCATCCTGCTCTCCTCTCTGCCCCTCAACGAGGAGTTAACGAAACTTGTGGACCTGGAGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 72 bp | TCACTCGGGCCACTATGGAAGACTTGGAGCTGTTCTTaGAGCTTTATGTGCAGCTTGGGGCTCAGCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLGPLWKTWSCS*SFMCSLGLSTG Trigger: CCCAGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTTCCATAGTGGCCCGAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS CCA 72 bp | TCTGGCCCTCAGCACCTTCACTTGAAGGTCGTAGTATaGGTGGGTTTCCTGCCGCCTATGCTTCCATTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGPQHLHLKVVV*VGFLPPMLPLW Trigger: CCACAATGGAAGCATAGGCGGCAGGAAACCCACCCATACTACGACCTTCAAGTGAAGGTGCTGAGGGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | CCGTGGGCAGCCACAGTCGAACATAGCAGTCGGCTTTaGACAACTTATCTGTGTGCTGGATGTTTCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PWAATVEHSSRL*TTYLCAGCFWP Trigger: GGGCCAGAAACATCCAGCACACAGATAAGTTGTCCAAAGCCGACTGCTATGTTCGACTGTGGCTGCCCACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS CCA 72 bp | GAATATGTCCAGCACAGCCTGAGAGAAGGAACTCATTaGCGTGAAGAGTCTGGTAGGCAGCCGTGTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EYVQHSLREGTH*REESGRQPCGV Trigger: GACCCCACACGGCTGCCTACCAGACTCTTCACGCCAATGAGTTCCTTCTCTCAGGCTGTGCTGGACATATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS CCA 72 bp | CAAACAGATAGCATTCACGGGGGTCTTCAGAGTCCTTaGGGTCCACCTCAATCCTTGGGAAGGGGATCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QTDSIHGGLQSP*GPPQSLGRGSL Trigger: GAGGGATCCCCTTCCCAAGGATTGAGGTGGACCCCAAGGACTCTGAAGACCCCCGTGAATGCTATCTGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS CAA 72 bp | TGTGTGCTGGATGTTTCTGGCCCTCAGCACCTTCACTaGAAGGTCGTAGTATGGGTGGGTTTCCTGCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CVLDVSGPQHLH*KVVVWVGFLPP Trigger: AGGCGGCAGGAAACCCACCCATACTACGACCTTCAAGTGAAGGTGCTGAGGGCCAGAAACATCCAGCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 72 bp | TCCAGAGCCAGCTGGAGGGCATGCCTGATAGTCTCCTaGTTGTTCAAGACGTTGTATCGGCTCAGGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRASWRACLIVS*LFKTLYRLRVT Trigger: GGTGACCCTGAGCCGATACAACGTCTTGAACAACAAGGAGACTATCAGGCATGCCCTCCAGCTGGCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS CAA 90 bp | TTCCAGCTCATCACTCGGGCCACTATGGAAGACTTGGAGCTGTTCTaGCAGCTTTATGTGCAGCTTGGGGCTCAGCACTGGGTTCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: FQLITRATMEDLELF*QLYVQLGAQHWVHV Trigger: CACGTGAACCCAGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTTCCATAGTGGCCCGAGTGATGAGCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
||
| CDS TCA 72 bp | CATTCTGGATCACTGCTGTTAACCACTGTCCTTGTCTaGCTGGGGCTAACAGAAGCCGTGGGCAGCCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSGSLLLTTVLV*LGLTEAVGSHS Trigger: ACTGTGGCTGCCCACGGCTTCTGTTAGCCCCAGTCAGACAAGGACAGTGGTTAACAGCAGTGATCCAGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 72 bp | GGGTCACCAGCCGATCAAATTCCTTGGGCTCGTAGGTaGAATCCATCATGCCATAGGCAGTATCTGGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GSPADQIPWARR*NPSCHRQYLAR Trigger: ACGGGCCAGATACTGCCTATGGCATGATGGATTTCACCTACGAGCCCAAGGAATTTGATCGGCTGGTGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS GCA 72 bp | GCCTCCCAGCTTCAGGAAGATCTCATACAGGCTGGCTaGAAAAGCACTTCCCCACATACCCTGCAGGTAACA | + |
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Preference number: 6 (lower is better) Translates to: ASQLQEDLIQAG*KSTSPHTLQVT Trigger: TGTTACCTGCAGGGTATGTGGGGAAGTGCTTTTGCAGCCAGCCTGTATGAGATCTTCCTGAAGCTGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | GCTTCCAGCTCATCACTCGGGCCACTATGGAAGACTTaGAGCTGTTCTTGCAGCTTTATGTGCAGCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ASSSSLGPLWKT*SCSCSFMCSLG Trigger: CCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTTCCATAGTGGCCCGAGTGATGAGCTGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | TTAGGCCTCCCAGCTTCAGGAAGATCTCATACAGGCTaGCTGCAAAAGCACTTCCCCACATACCCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LGLPASGRSHTG*LQKHFPTYPAG Trigger: ACCTGCAGGGTATGTGGGGAAGTGCTTTTGCAGCCAGCCTGTATGAGATCTTCCTGAAGCTGGGAGGCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 72 bp | ATCACTCGGGCCACTATGGAAGACTTGGAGCTGTTCTaGCAGCTTTATGTGCAGCTTGGGGCTCAGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: ITRATMEDLELF*QLYVQLGAQHW Trigger: CCAGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTTCCATAGTGGCCCGAGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 72 bp | TTCTCAGACAGGGGTGAGCCACCAGGACACCATTGGTaGCAACTTCAGATGCAGGCGTCTGACTCTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FSDRGEPPGHHW*QLQMQASDSFP Trigger: TGGAAAAGAGTCAGACGCCTGCATCTGAAGTTGTCACCAATGGTGTCCTGGTGGCTCACCCCTGTCTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 72 bp | AGCTTCCAGCTCATCACTCGGGCCACTATGGAAGACTaGGAGCTGTTCTTGCAGCTTTATGTGCAGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SFQLITRATMED*ELFLQLYVQLG Trigger: CCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTTCCATAGTGGCCCGAGTGATGAGCTGGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 90 bp | CAACTTATCTGTGTGCTGGATGTTTCTGGCCCTCAGCACCTTCACTaGAAGGTCGTAGTATGGGTGGGTTTCCTGCCGCCTATGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QLICVLDVSGPQHLH*KVVVWVGFLPPMLP Trigger: TGGAAGCATAGGCGGCAGGAAACCCACCCATACTACGACCTTCAAGTGAAGGTGCTGAGGGCCAGAAACATCCAGCACACAGATAAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 90 bp | CCACTATGGAAGACTTGGAGCTGTTCTTGCAGCTTTATGTGCAGCTaGGGGCTCAGCACTGGGTTCACGTGGAAGGTAAAGTTCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: PLWKTWSCSCSFMCS*GLSTGFTWKVKFTG Trigger: CCCAGTGAACTTTACCTTCCACGTGAACCCAGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTTCCATAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | CTCGTAGGTGAAATCCATCATGCCATAGGCAGTATCTaGCCCGTTGATGATAAAGTCCCCGAAGGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LVGEIHHAIGSI*PVDDKVPEGLL Trigger: GAGAAGGCCTTCGGGGACTTTATCATCAACGGGCCAGATACTGCCTATGGCATGATGGATTTCACCTACGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 72 bp | AAGACTTGGAGCTGTTCTTGCAGCTTTATGTGCAGCTaGGGGCTCAGCACTGGGTTCACGTGGAAGGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: KTWSCSCSFMCS*GLSTGFTWKVK Trigger: CTTTACCTTCCACGTGAACCCAGTGCTGAGCCCCAAGCTGCACATAAAGCTGCAAGAACAGCTCCAAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CAA 72 bp | AGGGCATGCCTGATAGTCTCCTTGTTGTTCAAGACGTaGTATCGGCTCAGGGTCACCAGCCGATCAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: RACLIVSLLFKT*YRLRVTSRSNS Trigger: GGAATTTGATCGGCTGGTGACCCTGAGCCGATACAACGTCTTGAACAACAAGGAGACTATCAGGCATGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | GCTGGCCTAGCTGAAGAGTACTCGTGTCAAACAGAATaGAGAAGACATTGTCACTGTCCAGGACATCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: AGLAEEYSCQTE*RRHCHCPGHPR Trigger: ACGAGGATGTCCTGGACAGTGACAATGTCTTCTCCATTCTGTTTGACACGAGTACTCTTCAGCTAGGCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | GGCTCTCTTTTCCCGGGAGTAGTATTCAAACTGCTTTaGGGACAGCATCCCAATTTTACTGCTGCAGACTCG | + |
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Preference number: 6 (lower is better) Translates to: GSLFPGVVFKLL*GQHPNFTAADS Trigger: CGAGTCTGCAGCAGTAAAATTGGGATGCTGTCCCCAAAGCAGTTTGAATACTACTCCCGGGAAAAGAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | GTTTTTGTGGACATTAATGCTGGCATAGATGGGGTATaGGTTCTGACCCTGGCTGACCGTTTCTTGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: VFVDINAGIDGV*VLTLADRFLLV Trigger: GACCAGCAAGAAACGGTCAGCCAGGGTCAGAACCCATACCCCATCTATGCCAGCATTAATGTCCACAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS TCA 72 bp | CAAGTAATACGGGAGGTGAATATGTCCAGCACAGCCTaGGAGAAGGAACTCATTGGCGTGAAGAGTCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: QVIREVNMSSTA*EKELIGVKSLV Trigger: TACCAGACTCTTCACGCCAATGAGTTCCTTCTCTCAGGCTGTGCTGGACATATTCACCTCCCGTATTACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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| CDS CCA 72 bp | TTGTACATGCAGAGACCTCGGGTAAAGTTAAAGGTCTaGGCACAAGTAATACGGGAGGTGAATATGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LYMQRPRVKLKV*AQVIREVNMSS Trigger: GCTGGACATATTCACCTCCCGTATTACTTGTGCCCAGACCTTTAACTTTACCCGAGGTCTCTGCATGTACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054651.8 |
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