Pregenerated sensors for PLA2G4E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050211Ensembl transcript IDs: ENSMUST00000090071.5
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGCCAGAGGACGTTACTGGCGCCAGATAGCGTCATGCACCCGGTaGCGCTTGCCCACAGCCTGCCAAGGCTTCCCTGGATCCTCACTC | + |
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Preference number: 1 (lower is better) Translates to: DARGRYWRQIASCTR*RLPTACQGFPGSSL Trigger: GAGTGAGGATCCAGGGAAGCCTTGGCAGGCTGTGGGCAAGCGGCACCGGGTGCATGACGCTATCTGGCGCCAGTAACGTCCTCTGGCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR GCA 90 bp | TGGCGCCAGATAGCGTCATGCACCCGGTGCCGCTTGCCCACAGCCTaGCAAGGCTTCCCTGGATCCTCACTCTGTGAGCTTCTGCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: WRQIASCTRCRLPTA*QGFPGSSLCELLLF Trigger: GAACAGCAGAAGCTCACAGAGTGAGGATCCAGGGAAGCCTTGGCAGGCTGTGGGCAAGCGGCACCGGGTGCATGACGCTATCTGGCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CCA 90 bp | TTGGGTAGGGACCAGTTTTCCAGGCTCAGAAGCCCAGCTTATCAGTaGCTCAGCAGAGTCTATGGACTCATGCTCCCCAGGCTGGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: LGRDQFSRLRSPAYQ*LSRVYGLMLPRLVG Trigger: TCCTACCAGCCTGGGGAGCATGAGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGAAAACTGGTCCCTACCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR GCA 90 bp | TGTTGCGACCCTAGCCAGAGATCAGGGACAGCTGTGTGTGAGGTCTaGTTTGGGGGCGATGCTTCTGACAATAGAAGCAGACACGAGATA | + |
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Preference number: 1 (lower is better) Translates to: CCDPSQRSGTAVCEV*FGGDASDNRSRHEI Trigger: TATCTCGTGTCTGCTTCTATTGTCAGAAGCATCGCCCCCAAAGCAGACCTCACACACAGCTGTCCCTGATCTCTGGCTAGGGTCGCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR TCA 90 bp | TGCCCACATATTCACATTCTATACTTGAGACTGTGTGGGAGTCTGTaGCCCTGGTACCTTCCTTGCCAGAAAGTGGAGAGAAGCCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: CPHIHILYLRLCGSL*PWYLPCQKVERSPR Trigger: CCTGGGGCTTCTCTCCACTTTCTGGCAAGGAAGGTACCAGGGTCACAGACTCCCACACAGTCTCAAGTATAGAATGTGAATATGTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CCA 90 bp | AAACAACACCGTTGGGTGTCATTAATCTCTCAACAACCAGGACTGTaGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: KQHRWVSLISQQPGL*RDHVAQKEALVLQA Trigger: TGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCCACAGTCCTGGTTGTTGAGAGATTAATGACACCCAACGGTGTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CCA 90 bp | AGGGCTAGAGGAGGTGATGAACATCCAACTCACATCAGCAACACTTaGGTAGGGACCAGTTTTCCAGGCTCAGAAGCCCAGCTTATCAGT | + |
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Preference number: 1 (lower is better) Translates to: RARGGDEHPTHISNT*VGTSFPGSEAQLIS Trigger: ACTGATAAGCTGGGCTTCTGAGCCTGGAAAACTGGTCCCTACCCAAGTGTTGCTGATGTGAGTTGGATGTTCATCACCTCCTCTAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CCA 90 bp | CCACTCTCTGTGCCCACATATTCACATTCTATACTTGAGACTGTGTaGGAGTCTGTGACCCTGGTACCTTCCTTGCCAGAAAGTGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: PLSVPTYSHSILETV*ESVTLVPSLPESGE Trigger: CTCTCCACTTTCTGGCAAGGAAGGTACCAGGGTCACAGACTCCCACACAGTCTCAAGTATAGAATGTGAATATGTGGGCACAGAGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CCA 90 bp | ATATGCTATGGTGAGTCAAACCTTGCAAAATACAAGGTTCTATCTTaGCTCTCTTTGACAATTCAGAGCCTGTTCTCTACATGGGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: ICYGESNLAKYKVLS*LSLTIQSLFSTWGK Trigger: CTTCCCCCATGTAGAGAACAGGCTCTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGACTCACCATAGCATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR TCA 90 bp | TGTGTTCAAATGGTACAGTGCTCTTATAAACTTTATATGCTATGGTaGGTCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: CVQMVQCSYKLYMLW*VKPCKIQGSILALF Trigger: AAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGACTCACCATAGCATATAAAGTTTATAAGAGCACTGTACCATTTGAACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATCTCCAGCTCGAAGGGTaGGGGCTCTTGGGAACTAGC | + |
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Preference number: 2 (lower is better) Translates to: AQKEALVLQARWAPQRPHLQLEG*GLLGTS Trigger: GCTAGTTCCCAAGAGCCCTCACCCTTCGAGCTGGAG...ATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATCTGTGTGGGAGTCTGTaGCCCTGGTACCTTCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: AQKEALVLQARWAPQRPHLCGSL*PWYLPC Trigger: GCAAGGAAGGTACCAGGGTCACAGACTCCCACACAG...ATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR TCA 90 bp | AGGCACTGGTGTCTCTTCACAGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGAGGGACAGCTGTGTGTaGGGTCTGCTTTGGGGGCGA | + |
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Preference number: 2 (lower is better) Translates to: RHWCLFTVWVPVGVAGSGRDSCV*GLLWGR Trigger: TCGCCCCCAAAGCAGACCTCACACACAGCTGTCCCT...CCCAGACCCAGCCACACCTACAGGAACCCATACTGTGAAGAGACACCAGTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CAA 90 bp | AACAACCAGGACTGTGGAGGGATCATGTGGCTCAGAAAGAGGCCCTaGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGC | + |
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Preference number: 2 (lower is better) Translates to: NNQDCGGIMWLRKRP*SSRHVGLPKGHIPS Trigger: GCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCCACAGTCCTGGTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCTTCCTTGCCAGAAAGTaGAGAGAAGCCCCAGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: GGIMWLRKRPLSSRHVGLFLARK*REAPGV Trigger: TACCCCTGGGGCTTCTCTCCACTTTCTGGCAAGGAA...GAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CAA 90 bp | GAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTaGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGGCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: EGSCGSERGPCPPGT*GSPKATYLAALWLL Trigger: TAAAAGCCAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGCTTATAGCCAGGCCCAATCCTTTGGCTTTTACCTaGTCACTGCAGGGACCCCCT | + |
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Preference number: 2 (lower is better) Translates to: TVWVPVGVAGSGLIARPNPLAFT*SLQGPP Trigger: AGGGGGTCCCTGCAGTGAGCAGGTAAAAGCCAAAGG...ATTGGGCCTGGCTATAAGCCCAGACCCAGCCACACCTACAGGAACCCATACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR GCA 90 bp | AGCAATGCCAGCCAGCTACTCCAGTGGAGGGCTAGAGGAGGTGATGAACATCCACCCTGGTACCTTCCTTaGCAGAAAGTGGAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SNASQLLQWRARGGDEHPPWYLP*QKVERS Trigger: GCTTCTCTCCACTTTCTGGCAAGGAAGGTACCAGGG...TGGATGTTCATCACCTCCTCTAGCCCTCCACTGGAGTAGCTGGCTGGCATTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR GCA 90 bp | ATTAATCTCTCAACAACCAGGACTGTGGAGGGATCATGTGGCTCAGAAAGAGGCCGCTTGCCCACAGCCTaGCAAGGCTTCCCTGGATCC | + |
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Preference number: 2 (lower is better) Translates to: INLSTTRTVEGSCGSERGRLPTA*QGFPGS Trigger: GGATCCAGGGAAGCCTTGGCAGGCTGTGGGCAAGCG...GCCTCTTTCTGAGCCACATGATCCCTCCACAGTCCTGGTTGTTGAGAGATTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGCTCAGAAGCCCAGCTTATCAGTGGCTCAGCAGAGTCTATGGACTCATGTGCAAGCCAGAGAGATaGCAGAGGACGTTACTGGCG | + |
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Preference number: 2 (lower is better) Translates to: SRLRSPAYQWLSRVYGLMCKPER*QRTLLA Trigger: CGCCAGTAACGTCCTCTGGCATCTCTCTGGCTTGCA...CATGAGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR CCA 90 bp | GACCCCCTTCTATCTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCAGGGACATTTCTCTAGACTaGCCATGGAAGGAGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: DPLLSFSEARRLGVRVSRDISLD*PWKEEK Trigger: CTTTTCCTCCTTCCATGGCCAGTCTAGAGAAATGTC...CCTGGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAGATAGAAGGGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CAA 90 bp | TGCCAAGGCTTCCCTGGATCCTCACTCTGTGAGCTTCTGCTGTTCTaGGTCTTCCTGGACATTTCTCTAGACTGGCCATGGAAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: CQGFPGSSLCELLLF*VFLDISLDWPWKEE Trigger: TTCCTCCTTCCATGGCCAGTCTAGAGAAATGTCCAGGAAGACCAAGAACAGCAGAAGCTCACAGAGTGAGGATCCAGGGAAGCCTTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR TCA 90 bp | TTTTCCAGGCTCAGAAGCCCAGCTTATCAGTGGCTCAGCAGAGTCTATGGACTCTGGATCCTCACTCTGTaGGCTTCTGCTGTTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: FSRLRSPAYQWLSRVYGLWILTL*ASAVLG Trigger: ACCAAGAACAGCAGAAGCTCACAGAGTGAGGATCCA...GAGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCTACATGGGGGAAGCAAAAGCAATGCCAGCCAGCTACTCCAGTGGAGGGACTAGCCACTCTCTGTaGCCACATATTCACATTCTA | + |
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Preference number: 2 (lower is better) Translates to: VLYMGEAKAMPASYSSGGTSHSL*PHIHIL Trigger: TAGAATGTGAATATGTGGGCACAGAGAGTGGCTAGT...CCCTCCACTGGAGTAGCTGGCTGGCATTGCTTTTGCTTCCCCCATGTAGAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGCTCTCTTTGACAATTCAGAGCCTGTTCTCTACATGGGGGAAGCAAAAGCTTTTACCTGCTCACTaGAGGGACCCCCTTCTATCT | + |
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Preference number: 2 (lower is better) Translates to: SWLSLTIQSLFSTWGKQKLLPAH*RDPLLS Trigger: AGATAGAAGGGGGTCCCTGCAGTGAGCAGGTAAAAG...CTTTTGCTTCCCCCATGTAGAGAACAGGCTCTGAATTGTCAAAGAGAGCCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR CCA 90 bp | AGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGCTTATAGCCAGGCCCAATCGTATAAACAACACCGTTaGGTGTCATTAATCTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: SMGSCRCGWVWAYSQAQSYKQHR*VSLISQ Trigger: TTGAGAGATTAATGACACCCAACGGTGTTGTTTATA...CGATTGGGCCTGGCTATAAGCCCAGACCCAGCCACACCTACAGGAACCCATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTGTCATTAATCTCTCAACAACCAGGACTGTGGAGGGATCATGTGGCTCAATAAATAACCCCATCTaGAAGCCAGAGAGATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGVINLSTTRTVEGSCGSINNPI*KPERCQ Trigger: CTGGCATCTCTCTGGCTTGCAGATGGGGTTATTTAT...TGAGCCACATGATCCCTCCACAGTCCTGGTTGTTGAGAGATTAATGACACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR GCA 90 bp | TCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTGACAATTCAGAGCGGCCACATACCTAGCTaGCCTTTGGCTTTTACCTGC | + |
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Preference number: 2 (lower is better) Translates to: SNLAKYKVLSWLSLTIQSGHIPS*PLAFTC Trigger: GCAGGTAAAAGCCAAAGGGCAGCTAGGTATGTGGCC...GCTCTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCTGCACCCGGTGCCGCTaGCCCACAGCCTGCCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: GGIMWLRKRPLSSRHVGLCTRCR*PTACQG Trigger: GCCTTGGCAGGCTGTGGGCAAGCGGCACCGGGTGCA...GAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR GCA 72 bp | GGACGTTACTGGCGCCAGATAGCGTCATGCACCCGGTaGCGCTTGCCCACAGCCTGCCAAGGCTTCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: GRYWRQIASCTR*RLPTACQGFPG Trigger: TCCAGGGAAGCCTTGGCAGGCTGTGGGCAAGCGGCACCGGGTGCATGACGCTATCTGGCGCCAGTAACGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR GCA 72 bp | ATAGCGTCATGCACCCGGTGCCGCTTGCCCACAGCCTaGCAAGGCTTCCCTGGATCCTCACTCTGTGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: IASCTRCRLPTA*QGFPGSSLCEL Trigger: AAGCTCACAGAGTGAGGATCCAGGGAAGCCTTGGCAGGCTGTGGGCAAGCGGCACCGGGTGCATGACGCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR GCA 72 bp | AGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGCTaGCCTTTGGCTTTTACCTGCTCACTGCAGGGACCC | + |
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Preference number: 3 (lower is better) Translates to: RHVGLPKGHIPS*PLAFTCSLQGP Trigger: GGGTCCCTGCAGTGAGCAGGTAAAAGCCAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR TCA 72 bp | GGATGCTTAGGGAACTTTTGCCTCCAGCTCGAAGGGTaGGGGCTCTTGGGAACTAGCCACTCTCTGTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: GCLGNFCLQLEG*GLLGTSHSLCP Trigger: TGGGCACAGAGAGTGGCTAGTTCCCAAGAGCCCTCACCCTTCGAGCTGGAGGCAAAAGTTCCCTAAGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CCA 72 bp | GACCAGTTTTCCAGGCTCAGAAGCCCAGCTTATCAGTaGCTCAGCAGAGTCTATGGACTCATGCTCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: DQFSRLRSPAYQ*LSRVYGLMLPR Trigger: CCTGGGGAGCATGAGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGAAAACTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CCA 72 bp | CGTTGGGTGTCATTAATCTCTCAACAACCAGGACTGTaGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: RWVSLISQQPGL*RDHVAQKEALV Trigger: GACAAGGGCCTCTTTCTGAGCCACATGATCCCTCCACAGTCCTGGTTGTTGAGAGATTAATGACACCCAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CCA 72 bp | TGGCTCTCTTTGACAATTCAGAGCCTGTTCTCTACATaGGGGAAGCAAAAGCAATGCCAGCCAGCTACTCCA | + |
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Preference number: 3 (lower is better) Translates to: WLSLTIQSLFST*GKQKQCQPATP Trigger: TGGAGTAGCTGGCTGGCATTGCTTTTGCTTCCCCCATGTAGAGAACAGGCTCTGAATTGTCAAAGAGAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR CAA 90 bp | AGCAATGCCAGCCAGCTACTCCAGTGGAGGGCTAGAGGAGGTGATGAACATCCAGAACCAGGAGTCCATTaGAAACATATAAACAACACC | + |
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Preference number: 3 (lower is better) Translates to: SNASQLLQWRARGGDEHPEPGVH*KHINNT Trigger: GGTGTTGTTTATATGTTTCAAATGGACTCCTGGTTC...TGGATGTTCATCACCTCCTCTAGCCCTCCACTGGAGTAGCTGGCTGGCATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR TCA 72 bp | ATTCACATTCTATACTTGAGACTGTGTGGGAGTCTGTaGCCCTGGTACCTTCCTTGCCAGAAAGTGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: IHILYLRLCGSL*PWYLPCQKVER Trigger: TCTCTCCACTTTCTGGCAAGGAAGGTACCAGGGTCACAGACTCCCACACAGTCTCAAGTATAGAATGTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR-3UTR CAA 90 bp | GAGTCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTGACAATTCAGACCCTGGTACCTTCCTaGCCAGAAAGTGGAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ESNLAKYKVLSWLSLTIQTLVPS*PESGEK Trigger: CTTCTCTCCACTTTCTGGCAAGGAAGGTACCAGGGT...CTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR TCA 72 bp | ACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTaGCAATTCAGAGCCTGTTCTCTACATGGGGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: TLQNTRFYLGSL*QFRACSLHGGS Trigger: GCTTCCCCCATGTAGAGAACAGGCTCTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CCA 72 bp | GGTGAGTCAAACCTTGCAAAATACAAGGTTCTATCTTaGCTCTCTTTGACAATTCAGAGCCTGTTCTCTACA | + |
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Preference number: 3 (lower is better) Translates to: GESNLAKYKVLS*LSLTIQSLFST Trigger: TGTAGAGAACAGGCTCTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGACTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR TCA 72 bp | ATGGTACAGTGCTCTTATAAACTTTATATGCTATGGTaGGTCAAACCTTGCAAAATACAAGGTTCTATCTTG | + |
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Preference number: 3 (lower is better) Translates to: MVQCSYKLYMLW*VKPCKIQGSIL Trigger: CAAGATAGAACCTTGTATTTTGCAAGGTTTGACTCACCATAGCATATAAAGTTTATAAGAGCACTGTACCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR GCA 72 bp | GTGTTCAAATGGTACAGTGCTCTTATAAACTTTATATaGTATGGTGAGTCAAACCTTGCAAAATACAAGGTT | + |
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Preference number: 3 (lower is better) Translates to: VFKWYSALINFI*YGESNLAKYKV Trigger: AACCTTGTATTTTGCAAGGTTTGACTCACCATAGCATATAAAGTTTATAAGAGCACTGTACCATTTGAACAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CAA 72 bp | GACTGTGGAGGGATCATGTGGCTCAGAAAGAGGCCCTaGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: DCGGIMWLRKRP*SSRHVGLPKGH Trigger: GTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCCACAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR CCA 90 bp | TTGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGTTGGGACAAGCATGCTaGTCCCCAGGCCATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSSRHVGLPKGHIPSCPLLGQAC*SPGHGG Trigger: GCCACCATGGCCTGGGGACCAGCATGCTTGTCCCAA...CAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR CCA 90 bp | GGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCGTGGCTGGGAGTACTTaGGGTAGTGGAAGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGIMWLRKRPLSSRHVGLVAGST*GSGSRQ Trigger: CTGCCTGCTTCCACTACCCCAAGTACTCCCAGCCAC...GAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| 3UTR CAA 72 bp | TGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTaGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: CGSERGPCPPGT*GSPKATYLAAL Trigger: AAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR TCA 90 bp | CTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCAGGGCTTCCCCAGAGACAGATGGCATGGAGATaGCCCCTCCTGAGAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVKPGGWVSGCPGLPQRQMAWR*PLLRTA Trigger: TGCAGTTCTCAGGAGGGGTCATCTCCATGCCATCTG...TCTCTGGGGAAGCCCTGGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR TCA 90 bp | CTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCAGGGCTTCCCCAGAGACATCAGAAAGGCAATTaGGGGGCTGGCAGACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVKPGGWVSGCPGLPQRHQKGN*GAGRQG Trigger: ACCCTGTCTGCCAGCCCCTCAATTGCCTTTCTGATG...TCTCTGGGGAAGCCCTGGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGACTGTGGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACTCCGTACTTCTGCATaGCCACCTCGTAGGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLWRDHVAQKEALVLQALRTSA*PPRRGR Trigger: TCTCCCCCTACGAGGTGGGCATGCAGAAGTACGGAG...TGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCCACAGTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | AAGGCCACATACCTAGCTGCCCTTTGGCTTTTACCTGCTCACTGCAGGGACCCCGCTCTTAGGCGCCTCTaGGTAAAGCTGTGGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KATYLAALWLLPAHCRDPALRRL*VKLWLG Trigger: TCCCAGCCACAGCTTTACGCAGAGGCGCCTAAGAGC...GGGGTCCCTGCAGTGAGCAGGTAAAAGCCAAAGGGCAGCTAGGTATGTGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATTCTTCCTCGGCCTCCTaGATTCTGCATGAACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQKEALVLQARWAPQRPHSSSAS*ILHEPP Trigger: TGGAGGTTCATGCAGAATCCAGGAGGCCGAGGAAGA...ATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | TTGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGAGGCAATTGAGGGGCTaGCAGACAGGGTCATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSRHVGLPKGHIPSCPLRQLRG*QTGSFL Trigger: CAGGAATGACCCTGTCTGCCAGCCCCTCAATTGCCT...CAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCTGCAACCCCAGCAGGTaGCCATACAAGGAGACCATA | + |
|
Preference number: 4 (lower is better) Translates to: GGIMWLRKRPLSSRHVGLCNPSR*PYKETI Trigger: TATGGTCTCCTTGTATGGCCACCTGCTGGGGTTGCA...GAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCGGACAGCCATGTCGTTaGGATCACTACTGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGIMWLRKRPLSSRHVGLGQPCR*DHYCGL Trigger: GAGACCACAGTAGTGATCCCAACGACATGGCTGTCC...GAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCACGTCAGCTCCTTGGTaGCATAGGGAGACTTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGIMWLRKRPLSSRHVGLTSAPW*HRETLV Trigger: GACCAAAGTCTCCCTATGCCACCAAGGAGCTGACGT...GAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR TCA 90 bp | TCCAGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGGCTTTTGGAGATGACCCCTCCTaGGAACTGCAAGAAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRHVGLPKGHIPSCPLAFGDDPS*ELQEAM Trigger: CATGGCTTCTTGCAGTTCTCAGGAGGGGTCATCTCC...AAAAGCCAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR TCA 90 bp | TTGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGGTGCGTAGCTGGAGTTaGCAAAGAACGCAGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSRHVGLPKGHIPSCPLVRSWS*QRTQCP Trigger: TGGACACTGCGTTCTTTGTCAACTCCAGCTACGCAC...CAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | AGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGCTTATAGCCAGGCCCAATCGCGGCCTCCTGGATTCTaGATGAACCTCCAGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMGSCRCGWVWAYSQAQSRPPGF*MNLQAR Trigger: TCTTGCCTGGAGGTTCATGCAGAATCCAGGAGGCCG...CGATTGGGCCTGGCTATAAGCCCAGACCCAGCCACACCTACAGGAACCCATACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | TTGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGAGAAAGTTCAGCTTCTaGAACCCCAGCAGGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSRHVGLPKGHIPSCPLRKFSF*NPSRWP Trigger: TGGCCACCTGCTGGGGTTGCAGAAGCTGAACTTTCT...CAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCCTGGGTGTAGGCAGTTaGAGATGGTTCTGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGIMWLRKRPLSSRHVGLLGVGS*RWFWSS Trigger: TGAAGACCAGAACCATCTCCAACTGCCTACACCCAG...GAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GACCCCCTTCTATCTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCAGGAGCCTAAAGTTACAGTaGCTCTTAGGCGCCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DPLLSFSEARRLGVRVSRSLKLQ*LLGASA Trigger: CGCAGAGGCGCCTAAGAGCCACTGTAACTTTAGGCT...CCTGGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAGATAGAAGGGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR TCA 90 bp | AGCAATGCCAGCCAGCTACTCCAGTGGAGGGCTAGAGGAGGTGATGAACATCCAGTCTTCAGCTTCTTCTaGGAGGCAGTAGGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNASQLLQWRARGGDEHPVFSFF*EAVGSQ Trigger: CTGGCTGCCTACTGCCTCTCAGAAGAAGCTGAAGAC...TGGATGTTCATCACCTCCTCTAGCCCTCCACTGGAGTAGCTGGCTGGCATTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | CTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCAGGGCTTCCCCAGAGAAGTCTGTGGGTCCTGTaGATCTTCAAATCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVKPGGWVSGCPGLPQRSLWVL*IFKSTA Trigger: TGCAGTGGATTTGAAGATGCACAGGACCCACAGACT...TCTCTGGGGAAGCCCTGGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTCTGTGACCCTGGTACCTTCCTTGCCAGAAAGTGGAGAGAAGCCCCAGGGGCACAGCAGTCTGTaGGTCCTGTGCATCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WESVTLVPSLPESGEKPQGHSSL*VLCIFK Trigger: TTTGAAGATGCACAGGACCCACAGACTGCTGTGCCC...CTGGGGCTTCTCTCCACTTTCTGGCAAGGAAGGTACCAGGGTCACAGACTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACGTTGGGCTCTTTGTAGAGCTGATCTaGGAACAGGGCAGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGIMWLRKRPLSSRHVGLFVELI*EQGRHL Trigger: AAGATGCCTGCCCTGTTCCCAGATCAGCTCTACAAA...GAGCCCAACGTGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGACTGTGGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACTGTGTCAGCTGGTTTaGGAAGGTGTCCAGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLWRDHVAQKEALVLQALCQLV*EGVQYC Trigger: ACAGTACTGGACACCTTCCCAAACCAGCTGACACAG...TGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCCACAGTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTCTGTGACCCTGGTACCTTCCTTGCCAGAAAGTGGAGAGAAGCCCCAGGGTGTCACTGATGAGTaGGAAGTAAGCCACGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: WESVTLVPSLPESGEKPQGVTDE*EVSHDG Trigger: CCCATCGTGGCTTACTTCCCACTCATCAGTGACACC...CTGGGGCTTCTCTCCACTTTCTGGCAAGGAAGGTACCAGGGTCACAGACTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| 3UTR CAA 72 bp | GCCAGAGATCAGGGACAGCTGTGTGTGAGGTCTGCTTaGGGGGCGATGCTTCTGACAATAGAAGCAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: ARDQGQLCVRSA*GAMLLTIEADT Trigger: CGTGTCTGCTTCTATTGTCAGAAGCATCGCCCCCAAAGCAGACCTCACACACAGCTGTCCCTGATCTCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR GCA 90 bp | AGCAATGCCAGCCAGCTACTCCAGTGGAGGGCTAGAGGAGGTGATGAACATCCATGGCCTAAGGAGGGGTaGGTAGCTGGAGTTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SNASQLLQWRARGGDEHPWPKEG*VAGVDK Trigger: TTTGTCAACTCCAGCTACGCACCCCTCCTTAGGCCA...TGGATGTTCATCACCTCCTCTAGCCCTCCACTGGAGTAGCTGGCTGGCATTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | TCTTGGCTCTCTTTGACAATTCAGAGCCTGTTCTCTACATGGGGGAAGCAAAAGGTCCCCAGGCCATGGTaGCCTTCTGAGGCGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWLSLTIQSLFSTWGKQKVPRPW*PSEAWV Trigger: GACCCACGCCTCAGAAGGCCACCATGGCCTGGGGAC...CTTTTGCTTCCCCCATGTAGAGAACAGGCTCTGAATTGTCAAAGAGAGCCAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR CCA 90 bp | AGGGACCCCCTTCTATCTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCGGCATAGGGAGACTTTaGTCCATAGATGTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDPLLSFSEARRLGVRVSGIGRL*SIDVQL Trigger: CAGCTGAACATCTATGGACCAAAGTCTCCCTATGCC...GGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAGATAGAAGGGGGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGGCTTTTACCCCTCCTGAGAACTaGAAGAAGCCATGGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRHVGLPKGHIPSCPLAFTPPEN*KKPWKV Trigger: TACTTTCCATGGCTTCTTGCAGTTCTCAGGAGGGGT...AAAAGCCAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR GCA 90 bp | AGGCACTGGTGTCTCTTCACAGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGCTTTGTCTGGGATCCTaGGCAGTAATTGAGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RHWCLFTVWVPVGVAGSGLCLGS*AVIEVD Trigger: ATCCACCTCAATTACTGCGCAGGATCCCAGACAAAG...CCCAGACCCAGCCACACCTACAGGAACCCATACTGTGAAGAGACACCAGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR CCA 90 bp | AGGCACTGGTGTCTCTTCACAGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGGTCTTCTTCCCCTTGTaGGTTCTTTGGGACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHWCLFTVWVPVGVAGSGVFFPL*VLWDKH Trigger: ATGCTTGTCCCAAAGAACCCACAAGGGGAAGAAGAC...CCCAGACCCAGCCACACCTACAGGAACCCATACTGTGAAGAGACACCAGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR CCA 90 bp | TTGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGAGGACTGTCAAGAGATaGTCATTTTGTGTCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSRHVGLPKGHIPSCPLRTVKR*SFCVRV Trigger: CACCCTGACACAAAATGACCATCTCTTGACAGTCCT...CAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR CCA 90 bp | GTTTTCCAGGCTCAGAAGCCCAGCTTATCAGTGGCTCAGCAGAGTCTATGGACTCCAGGATGGAGAAGCTaGGGAAGGGGATCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFQAQKPSLSVAQQSLWTPGWRS*GRGSSA Trigger: AGCAGAAGATCCCCTTCCCCAGCTTCTCCATCCTGG...AGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR TCA 90 bp | GTTTTCCAGGCTCAGAAGCCCAGCTTATCAGTGGCTCAGCAGAGTCTATGGACTCACCTCCTGTGGCCATaGTGGCTATTATCGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: VFQAQKPSLSVAQQSLWTHLLWP*WLLSVP Trigger: AGGTACCGATAATAGCCATCATGGCCACAGGAGGTG...AGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTCTACATGGGGGAAGCAAAAGCAATGCCAGCCAGCTACTCCAGTGGAGGGTCACGTAGCACTCCTTaGGACTGTTGTCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLYMGEAKAMPASYSSGGSRSTP*DCCHLP Trigger: TGGAAGATGACAACAGTCTCAAGGAGTGCTACGTGA...CCCTCCACTGGAGTAGCTGGCTGGCATTGCTTTTGCTTCCCCCATGTAGAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR TCA 90 bp | AGGCACTGGTGTCTCTTCACAGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGGCTAGTCTCAAGGCCTaGATGAGCTTATCTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RHWCLFTVWVPVGVAGSGASLKA*MSLSLL Trigger: TAACAGAGATAAGCTCATTCAGGCCTTGAGACTAGC...CCCAGACCCAGCCACACCTACAGGAACCCATACTGTGAAGAGACACCAGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | AGGCACTGGTGTCTCTTCACAGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGAGTTTCTTCCTAGCTTaGTGTCTTCTTCCCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RHWCLFTVWVPVGVAGSGSFFLA*CLLPLV Trigger: CACAAGGGGAAGAAGACAGCAAGCTAGGAAGAAACT...CCCAGACCCAGCCACACCTACAGGAACCCATACTGTGAAGAGACACCAGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR GCA 90 bp | GTTTTCCAGGCTCAGAAGCCCAGCTTATCAGTGGCTCAGCAGAGTCTATGGACTGGGAAGGGGATCTTCTaGTCGGTACAGTACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VFQAQKPSLSVAQQSLWTGKGIF*SVQYSQ Trigger: CTGTGAGTACTGTACCGAGCAGAAGATCCCCTTCCC...AGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR CCA 90 bp | AAGGCCACATACCTAGCTGCCCTTTGGCTTTTACCTGCTCACTGCAGGGACCCCAACTGCAAGAAGCCATaGAAAGTAAAGGTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KATYLAALWLLPAHCRDPNCKKP*KVKVRR Trigger: CCTCCTCACCTTTACTTTCCATGGCTTCTTGCAGTT...GGGGTCCCTGCAGTGAGCAGGTAAAAGCCAAAGGGCAGCTAGGTATGTGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS-3UTR CCA 90 bp | CACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGGCTTTTACCTGCAGTTGGAGATGGTTCTaGTCTTCAGCTTCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HVGLPKGHIPSCPLAFTCSWRWF*SSASSE Trigger: CTCAGAAGAAGCTGAAGACCAGAACCATCTCCAACT...GCAGGTAAAAGCCAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR TCA 90 bp | AGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGCTTATAGCCAGGCCCAATCGCGTTTTTCATGCCAATaGTCCTCACTGTCAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SMGSCRCGWVWAYSQAQSRFSCQ*SSLSTD Trigger: ATCTGTTGACAGTGAGGATCATTGGCATGAAAAACG...CGATTGGGCCTGGCTATAAGCCCAGACCCAGCCACACCTACAGGAACCCATACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR TCA 90 bp | AGTATGGGTTCCTGTAGGTGTGGCTGGGTCTGGGCTTATAGCCAGGCCCAATCGGAGGATATTATATTCTaGGAGCTTCACCAGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SMGSCRCGWVWAYSQAQSEDIIF*ELHQLV Trigger: GACAAGCTGGTGAAGCTCTCAGAATATAATATCCTC...CGATTGGGCCTGGCTATAAGCCCAGACCCAGCCACACCTACAGGAACCCATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | TTGGGTGTCATTAATCTCTCAACAACCAGGACTGTGGAGGGATCATGTGGCTCATCTTTGGGACAAGCATaGTGGTCCCCAGGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVINLSTTRTVEGSCGSSLGQA*WSPGHG Trigger: ACCATGGCCTGGGGACCAGCATGCTTGTCCCAAAGA...TGAGCCACATGATCCCTCCACAGTCCTGGTTGTTGAGAGATTAATGACACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | GTTTTCCAGGCTCAGAAGCCCAGCTTATCAGTGGCTCAGCAGAGTCTATGGACTACCATCTTCCGCTTCTaGACAAACTCCACCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFQAQKPSLSVAQQSLWTTIFRF*TNSTSS Trigger: GGAAGAGGTGGAGTTTGTGCAGAAGCGGAAGATGGT...AGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTCCAGGCTCAGAAGCCCAGCTTATCAGTGGCTCAGCAGAGTCTATGGACTGTAGGCAGTTGGAGATaGTTCTGGTCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFQAQKPSLSVAQQSLWTVGSWR*FWSSAS Trigger: AGAAGCTGAAGACCAGAACCATCTCCAACTGCCTAC...AGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | TCCAGGCTCAGAAGCCCAGCTTATCAGTGGCTCAGCAGAGTCTATGGACTCATGGGATTTCAGGCAGGATaGGATCATCTTCGATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRLRSPAYQWLSRVYGLMGFQAG*DHLRCH Trigger: ATGACATCGAAGATGATCCCATCCTGCCTGAAATCC...CATGAGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | TTGGGTGTCATTAATCTCTCAACAACCAGGACTGTGGAGGGATCATGTGGCTCACCGTACAGGAAGTTGTaGAACTCAGACACGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVINLSTTRTVEGSCGSPYRKL*NSDTKG Trigger: GCCCTTCGTGTCTGAGTTCCACAACTTCCTGTACGG...TGAGCCACATGATCCCTCCACAGTCCTGGTTGTTGAGAGATTAATGACACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GAGTCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTGACAATTCAGGTCGACTTTTCTCTCTaGCCTAAGGAGGGGTGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESNLAKYKVLSWLSLTIQVDFSL*PKEGCV Trigger: TACGCACCCCTCCTTAGGCCAGAGAGAAAAGTCGAC...CTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | GAGTCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTGACAATTCAGGCCCTCTGGGTTGAGTaGGAACTTCACATGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESNLAKYKVLSWLSLTIQALWVE*ELHMGF Trigger: AAAACCCATGTGAAGTTCCCACTCAACCCAGAGGGC...CTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CCA 90 bp | TCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTGACAATTCAGAGCTGTACGTCAGCTCCTTaGTGGCATAGGGAGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNLAKYKVLSWLSLTIQSCTSAP*WHRETL Trigger: CAAAGTCTCCCTATGCCACCAAGGAGCTGACGTACA...GCTCTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| 3UTR CAA 72 bp | AACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTaGACAATTCAGAGCCTGTTCTCTACATGGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLAKYKVLSWLS*TIQSLFSTWGK Trigger: CTTCCCCCATGTAGAGAACAGGCTCTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR TCA 90 bp | GAGTCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTGACAATTCAGAACTCCTCTGAGGTGTaGGACAAATTCCAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ESNLAKYKVLSWLSLTIQNSSEV*DKFQAS Trigger: TGATGCCTGGAATTTGTCTCACACCTCAGAGGAGTT...CTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR GCA 90 bp | GAGTCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTGACAATTCAGCAGGTTCAGGTGTTTTaGAAACTGTGTCAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESNLAKYKVLSWLSLTIQQVQVF*KLCQLV Trigger: AACCAGCTGACACAGTTTGCAAAACACCTGAACCTG...CTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS CCA 90 bp | AAAGCTGTGGCTGGGAGTACTTGGGGTAGTGGAAGCAGGCAGAATTaGGGTAGCAGGGCTCCTGGCAAGGCGGGACACGCTGGGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KAVAGSTWGSGSRQN*GSRAPGKAGHAGCS Trigger: AGAACACCCAGCGTGTCCCGCCTTGCCAGGAGCCCTGCTACCCCAATTCTGCCTGCTTCCACTACCCCAAGTACTCCCAGCCACAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS TCA 90 bp | TCTCTCCCACAGGCAGGGTTGTCACCTGGCCATCAGAAAGGCAATTaGGGGGCTGGCAGACAGGGTCATTCCTGTGTGTTCCGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLPQAGLSPGHQKGN*GAGRQGHSCVFRSS Trigger: GCTGCTGCGGAACACACAGGAATGACCCTGTCTGCCAGCCCCTCAATTGCCTTTCTGATGGCCAGGTGACAACCCTGCCTGTGGGAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS CCA 90 bp | GGCGGCCTCTGTGTACGTCAGCTCCTTGGTGGCATAGGGAGACTTTaGTCCATAGATGTTCAGCTGGCCCAGTTCCAGCTCGTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GGLCVRQLLGGIGRL*SIDVQLAQFQLVRT Trigger: AGTCCTGACGAGCTGGAACTGGGCCAGCTGAACATCTATGGACCAAAGTCTCCCTATGCCACCAAGGAGCTGACGTACACAGAGGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCTCAGAAGCCCAGCTTATCAGTGGCTCAGCAGAGTCTATGGACTCATGCTCCAGGCAAGAGACTaGGCGAGACACCAGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRLRSPAYQWLSRVYGLMLQARD*ARHQHA Trigger: GGCGTGCTGGTGTCTCGCCAAGTCTCTTGCCTGGAG...CATGAGTCCATAGACTCTGCTGAGCCACTGATAAGCTGGGCTTCTGAGCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCCACATACCTAGCTGCCCTTTGGCTTTTACCTGCTCACTGCAGGGACCCCCCATCAGAAAGGCAATaGAGGGGCTGGCAGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KATYLAALWLLPAHCRDPPSERQ*RGWQTG Trigger: CCCTGTCTGCCAGCCCCTCAATTGCCTTTCTGATGG...GGGGTCCCTGCAGTGAGCAGGTAAAAGCCAAAGGGCAGCTAGGTATGTGGCCTT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCTGTGACCCTGGTACCTTCCTTGCCAGAAAGTGGAGAGAAGCCCCAGCTCCCACAGGCAGGGTaGTCACCTGGCCATCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: WESVTLVPSLPESGEKPQLPQAG*SPGHQK Trigger: TTTCTGATGGCCAGGTGACAACCCTGCCTGTGGGAG...CTGGGGCTTCTCTCCACTTTCTGGCAAGGAAGGTACCAGGGTCACAGACTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS TCA 90 bp | CCATCTTCCGCTTCTGCACAAACTCCACCTCTTCCTGGCACAGGCTaGATCCAAGCCGCACATCCAGTGTGTCAGAGCAGGGTGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PSSASAQTPPLPGTG*IQAAHPVCQSRVRT Trigger: AGTCCTCACCCTGCTCTGACACACTGGATGTGCGGCTTGGATTCAGCCTGTGCCAGGAAGAGGTGGAGTTTGTGCAGAAGCGGAAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS GCA 90 bp | TCCGCAGCAGCAAAGCCTAAAGTTACAGTGGCTCTTAGGCGCCTCTaGGTAAAGCTGTGGCTGGGAGTACTTGGGGTAGTGGAAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAAAKPKVTVALRRL*VKLWLGVLGVVEAG Trigger: GCCTGCTTCCACTACCCCAAGTACTCCCAGCCACAGCTTTACGCAGAGGCGCCTAAGAGCCACTGTAACTTTAGGCTTTGCTGCTGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS CCA 90 bp | ACAGGCAGGGTTGTCACCTGGCCATCAGAAAGGCAATTGAGGGGCTaGCAGACAGGGTCATTCCTGTGTGTTCCGCAGCAGCAAAGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: TGRVVTWPSERQLRG*QTGSFLCVPQQQSL Trigger: TAGGCTTTGCTGCTGCGGAACACACAGGAATGACCCTGTCTGCCAGCCCCTCAATTGCCTTTCTGATGGCCAGGTGACAACCCTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS CCA 90 bp | TTGGCCACCACCATCTTCCGCTTCTGCACAAACTCCACCTCTTCCTaGCACAGGCTGAATCCAAGCCGCACATCCAGTGTGTCAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LATTIFRFCTNSTSS*HRLNPSRTSSVSEQ Trigger: CTGCTCTGACACACTGGATGTGCGGCTTGGATTCAGCCTGTGCCAGGAAGAGGTGGAGTTTGTGCAGAAGCGGAAGATGGTGGTGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | AGCAATGCCAGCCAGCTACTCCAGTGGAGGGCTAGAGGAGGTGATGAACATCCACCCCTTGTGGGTTCTTaGGGACAAGCATGCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SNASQLLQWRARGGDEHPPLVGS*GQACWS Trigger: GGACCAGCATGCTTGTCCCAAAGAACCCACAAGGGG...TGGATGTTCATCACCTCCTCTAGCCCTCCACTGGAGTAGCTGGCTGGCATTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | AGGGACCCCCTTCTATCTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCGCTGTCTTCTTCCCCTaGTGGGTTCTTTGGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: RDPLLSFSEARRLGVRVSAVFFP*WVLWDK Trigger: CTTGTCCCAAAGAACCCACAAGGGGAAGAAGACAGC...GGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAGATAGAAGGGGGTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | GACCCCCTTCTATCTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCAGGTCTGGGTGTAGGCAGTaGGAGATGGTTCTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DPLLSFSEARRLGVRVSRSGCRQ*EMVLVF Trigger: GAAGACCAGAACCATCTCCAACTGCCTACACCCAGA...CCTGGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAGATAGAAGGGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTACATGGGGGAAGCAAAAGCAATGCCAGCCAGCTACTCCAGTGGAGGGGACACCAGCACGCCGTaGGTGATGAGGGTCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLYMGEAKAMPASYSSGGDTSTP*VMRVSD Trigger: ATCAGAGACCCTCATCACCAACGGCGTGCTGGTGTC...CCCTCCACTGGAGTAGCTGGCTGGCATTGCTTTTGCTTCCCCCATGTAGAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | CTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCAGGGCTTCCCCAGAGAGCAGGTTCAGGTGTTTaGCAAACTGTGTCAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLVKPGGWVSGCPGLPQRAGSGV*QTVSAG Trigger: ACCAGCTGACACAGTTTGCAAAACACCTGAACCTGC...TCTCTGGGGAAGCCCTGGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTACATGGGGGAAGCAAAAGCAATGCCAGCCAGCTACTCCAGTGGAGGGTCCATGCCCTCTGGGTaGAGTGGGAACTTCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: VLYMGEAKAMPASYSSGGSMPSG*SGNFTW Trigger: CCATGTGAAGTTCCCACTCAACCCAGAGGGCATGGA...CCCTCCACTGGAGTAGCTGGCTGGCATTGCTTTTGCTTCCCCCATGTAGAGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | AGCAATGCCAGCCAGCTACTCCAGTGGAGGGCTAGAGGAGGTGATGAACATCCAGCAGGCATCTTGTCTTaGACAACATGTCTCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SNASQLLQWRARGGDEHPAGILS*TTCLRA Trigger: GGCCCGGAGACATGTTGTCAAAGACAAGATGCCTGC...TGGATGTTCATCACCTCCTCTAGCCCTCCACTGGAGTAGCTGGCTGGCATTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | CACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGGCTTTTACCTGCTGGACAGCCATGTCGTaGGGATCACTACTGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HVGLPKGHIPSCPLAFTCWTAMS*GSLLWS Trigger: AGACCACAGTAGTGATCCCAACGACATGGCTGTCCA...GCAGGTAAAAGCCAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS TCA 90 bp | AGGTCTTTGTTTTTCTTCCTCTTCCTCGGCCTCCTGGATTCTGCATaGACCTCCAGGCAAGAGACTTGGCGAGACACCAGCACGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLFFFLFLGLLDSA*TSRQETWRDTSTPL Trigger: CAACGGCGTGCTGGTGTCTCGCCAAGTCTCTTGCCTGGAGGTTCATGCAGAATCCAGGAGGCCGAGGAAGAGGAAGAAAAACAAAGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | TTGTCCTCCAGGCACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGCAAGAGATGGTCATTTaGTGTCAGGGTGTCTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSRHVGLPKGHIPSCPLQEMVI*CQGVFV Trigger: GACGAAGACACCCTGACACAAAATGACCATCTCTTG...CAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTGCCTGGAGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCTGTGACCCTGGTACCTTCCTTGCCAGAAAGTGGAGAGAAGCCCCAGACAGTCTCCAGGTTTTaGGAGGACCACTCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: WESVTLVPSLPESGEKPQTVSRF*EDHSGS Trigger: TGATCCTGAGTGGTCCTCCAAAAACCTGGAGACTGT...CTGGGGCTTCTCTCCACTTTCTGGCAAGGAAGGTACCAGGGTCACAGACTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGACTGTGGAGGGATCATGTGGCTCAGAAAGAGGCCCTTGTCCTCCAGGCACTGTACTCGATCAGCTaGCCCCAAAAGTCTGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGLWRDHVAQKEALVLQALYSIS*PQKSVN Trigger: GTTTACAGACTTTTGGGGCAAGCTGATCGAGTACAG...TGCCTGGAGGACAAGGGCCTCTTTCTGAGCCACATGATCCCTCCACAGTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | AGGGACCCCCTTCTATCTTTTAGTGAAGCCAGGAGGCTGGGTGTCCGGGTGTCCACAGTACTCACAGGTTaGTTTCAGGGGCTTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDPLLSFSEARRLGVRVSTVLTG*FQGLCL Trigger: CAGACAAAGCCCCTGAAACAAACCTGTGAGTACTGT...GGACACCCGGACACCCAGCCTCCTGGCTTCACTAAAAGATAGAAGGGGGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS GCA 90 bp | GAGGTGGATGATAAGGTCGACTTTTCTCTCTGGCCTAAGGAGGGGTaGGTAGCTGGAGTTGACAAAGAACGCAGTGTCCAGCAGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVDDKVDFSLWPKEG*VAGVDKERSVQQVQ Trigger: CTGAACCTGCTGGACACTGCGTTCTTTGTCAACTCCAGCTACGCACCCCTCCTTAGGCCAGAGAGAAAAGTCGACCTTATCATCCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS CCA 90 bp | AAGCCTAAAGTTACAGTGGCTCTTAGGCGCCTCTGCGTAAAGCTGTaGCTGGGAGTACTTGGGGTAGTGGAAGCAGGCAGAATTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPKVTVALRRLCVKL*LGVLGVVEAGRIGV Trigger: TACCCCAATTCTGCCTGCTTCCACTACCCCAAGTACTCCCAGCCACAGCTTTACGCAGAGGCGCCTAAGAGCCACTGTAACTTTAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS CCA 90 bp | CTGGCTATGCTTTTGGAGGTCCTCTCGCCATTTGTAGAGCTGATCTaGGAACAGGGCAGGCATCTTGTCTTTGACAACATGTCTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAMLLEVLSPFVELI*EQGRHLVFDNMSPG Trigger: GCCCGGAGACATGTTGTCAAAGACAAGATGCCTGCCCTGTTCCCAGATCAGCTCTACAAATGGCGAGAGGACCTCCAAAAGCATAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | CACGTTGGGCTCCCCAAAGGCCACATACCTAGCTGCCCTTTGGCTTTTACCTGCTGGCATAGGGAGACTTaGGTCCATAGATGTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVGLPKGHIPSCPLAFTCWHRET*VHRCSA Trigger: AGCTGAACATCTATGGACCAAAGTCTCCCTATGCCA...GCAGGTAAAAGCCAAAGGGCAGCTAGGTATGTGGCCTTTGGGGAGCCCAACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS GCA 90 bp | AGGAGGGCACAGCAGTCTGTGGGTCCTGTGCATCTTCAAATCCACTaGAGTTTCTTCCTAGCTTGCTGTCTTCTTCCCCTTGTGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRAQQSVGPVHLQIH*SFFLACCLLPLVGS Trigger: AGAACCCACAAGGGGAAGAAGACAGCAAGCTAGGAAGAAACTGCAGTGGATTTGAAGATGCACAGGACCCACAGACTGCTGTGCCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS GCA 90 bp | TCCTCACTGTCAACAGATGGCATGGAGATGACCCCTCCTGAGAACTaGAAGAAGCCATGGAAAGTAAAGGTGAGGAGGGCACAGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLSTDGMEMTPPEN*KKPWKVKVRRAQQS Trigger: AGACTGCTGTGCCCTCCTCACCTTTACTTTCCATGGCTTCTTGCAGTTCTCAGGAGGGGTCATCTCCATGCCATCTGTTGACAGTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | AGCAATGCCAGCCAGCTACTCCAGTGGAGGGCTAGAGGAGGTGATGAACATCCACAGTTTCTTCCTAGCTaGCTGTCTTCTTCCCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SNASQLLQWRARGGDEHPQFLPS*LSSSPC Trigger: ACAAGGGGAAGAAGACAGCAAGCTAGGAAGAAACTG...TGGATGTTCATCACCTCCTCTAGCCCTCCACTGGAGTAGCTGGCTGGCATTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS TCA 90 bp | CTGTCTGACTCAGTATATCAGCCTGCCGGACGTTTTTCATGCCAATaGTCCTCACTGTCAACAGATGGCATGGAGATGACCCCTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSDSVYQPAGRFSCQ*SSLSTDGMEMTPPE Trigger: CTCAGGAGGGGTCATCTCCATGCCATCTGTTGACAGTGAGGATCATTGGCATGAAAAACGTCCGGCAGGCTGATATACTGAGTCAGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS GCA 90 bp | GTGGGTCCTGTGCATCTTCAAATCCACTGCAGTTTCTTCCTAGCTTaGTGTCTTCTTCCCCTTGTGGGTTCTTTGGGACAAGCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGPVHLQIHCSFFLA*CLLPLVGSLGQACW Trigger: CCAGCATGCTTGTCCCAAAGAACCCACAAGGGGAAGAAGACAGCAAGCTAGGAAGAAACTGCAGTGGATTTGAAGATGCACAGGACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS CCA 90 bp | TCCTGCGCAGTAATTGAGGTGGATGATAAGGTCGACTTTTCTCTCTaGCCTAAGGAGGGGTGCGTAGCTGGAGTTGACAAAGAACGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCAVIEVDDKVDFSL*PKEGCVAGVDKERS Trigger: ACTGCGTTCTTTGTCAACTCCAGCTACGCACCCCTCCTTAGGCCAGAGAGAAAAGTCGACCTTATCATCCACCTCAATTACTGCGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS TCA 90 bp | CGCTCAGCTCTAGCACATTCTTTACTTGAGTCTGGATCTGAAAGGTaGAGCTTTCGTCCCACTCTGGGTGTAGGCAGTTGGAGATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSALAHSLLESGSER*SFRPTLGVGSWRWF Trigger: GAACCATCTCCAACTGCCTACACCCAGAGTGGGACGAAAGCTTCACCTTTCAGATCCAGACTCAAGTAAAGAATGTGCTAGAGCTGAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS TCA 90 bp | CCACTCAGGATCACTGTACAAGGTAGCCATAGTCCAGGTTGCACCTaGCAAGCCGGTGATGTAAGTAGAAGCGTCCAGAAAGTTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLRITVQGSHSPGCT*QAGDVSRSVQKVQL Trigger: AAGCTGAACTTTCTGGACGCTTCTACTTACATCACCGGCTTGTCAGGTGCAACCTGGACTATGGCTACCTTGTACAGTGATCCTGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS TCA 90 bp | GCCATTTGTAGAGCTGATCTGGGAACAGGGCAGGCATCTTGTCTTTaGCAACATGTCTCCGGGCCTCAAAGACAACAGTCTCCAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AICRADLGTGQASCL*QHVSGPQRQQSPGF Trigger: AAAACCTGGAGACTGTTGTCTTTGAGGCCCGGAGACATGTTGTCAAAGACAAGATGCCTGCCCTGTTCCCAGATCAGCTCTACAAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTACATGGGGGAAGCAAAAGCAATGCCAGCCAGCTACTCCAGTGGAGGGTCTCTGAAATCCTGGTaGCTTACATCATCCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: VLYMGEAKAMPASYSSGGSLKSW*LTSSLT Trigger: TGTCAAGGATGATGTAAGCAACCAGGATTTCAGAGA...CCCTCCACTGGAGTAGCTGGCTGGCATTGCTTTTGCTTCCCCCATGTAGAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | TTGGGTGTCATTAATCTCTCAACAACCAGGACTGTGGAGGGATCATGTGGCTCAACTGTGTCAGCTGGTTaGGGAAGGTGTCCAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LGVINLSTTRTVEGSCGSTVSAG*GRCPVL Trigger: CAGTACTGGACACCTTCCCAAACCAGCTGACACAGT...TGAGCCACATGATCCCTCCACAGTCCTGGTTGTTGAGAGATTAATGACACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS TCA 90 bp | CAAGGCCTGAATGAGCTTATCTCTGTTATTGAGGATATTATATTCTaGGAGCTTCACCAGCTTGTCGAAGGCGGCCTCTGTGTACGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QGLNELISVIEDIIF*ELHQLVEGGLCVRQ Trigger: CTGACGTACACAGAGGCCGCCTTCGACAAGCTGGTGAAGCTCTCAGAATATAATATCCTCAATAACAGAGATAAGCTCATTCAGGCCTTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | TCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTGACAATTCAGAGCATCCCGTACAGGAAGTaGTGGAACTCAGACACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNLAKYKVLSWLSLTIQSIPYRK*WNSDTK Trigger: CTTCGTGTCTGAGTTCCACAACTTCCTGTACGGGAT...GCTCTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS-3UTR CAA 90 bp | TCAAACCTTGCAAAATACAAGGTTCTATCTTGGCTCTCTTTGACAATTCAGAGCATCACCAGAAGGTCTTaGTTTTTCTTCCTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SNLAKYKVLSWLSLTIQSITRRS*FFFLFL Trigger: GAGGAAGAGGAAGAAAAACAAAGACCTTCTGGTGAT...GCTCTGAATTGTCAAAGAGAGCCAAGATAGAACCTTGTATTTTGCAAGGTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
||
| CDS CAA 90 bp | TTCTCTCCCACAGGCAGGGTTGTCACCTGGCCATCAGAAAGGCAATaGAGGGGCTGGCAGACAGGGTCATTCCTGTGTGTTCCGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSPTGRVVTWPSERQ*RGWQTGSFLCVPQQ Trigger: CTGCTGCGGAACACACAGGAATGACCCTGTCTGCCAGCCCCTCAATTGCCTTTCTGATGGCCAGGTGACAACCCTGCCTGTGGGAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS TCA 72 bp | CAGGCAGGGTTGTCACCTGGCCATCAGAAAGGCAATTaGGGGGCTGGCAGACAGGGTCATTCCTGTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: QAGLSPGHQKGN*GAGRQGHSCVF Trigger: GAACACACAGGAATGACCCTGTCTGCCAGCCCCTCAATTGCCTTTCTGATGGCCAGGTGACAACCCTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS TCA 72 bp | GCTTCTGCACAAACTCCACCTCTTCCTGGCACAGGCTaGATCCAAGCCGCACATCCAGTGTGTCAGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASAQTPPLPGTG*IQAAHPVCQSR Trigger: CCTGCTCTGACACACTGGATGTGCGGCTTGGATTCAGCCTGTGCCAGGAAGAGGTGGAGTTTGTGCAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CCA 72 bp | GTTACAGTGGCTCTTAGGCGCCTCTGCGTAAAGCTGTaGCTGGGAGTACTTGGGGTAGTGGAAGCAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: VTVALRRLCVKL*LGVLGVVEAGR Trigger: TCTGCCTGCTTCCACTACCCCAAGTACTCCCAGCCACAGCTTTACGCAGAGGCGCCTAAGAGCCACTGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 72 bp | TTCCTAGCTTGCTGTCTTCTTCCCCTTGTGGGTTCTTaGGGACAAGCATGCTGGTCCCCAGGCCATGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: FLACCLLPLVGS*GQACWSPGHGG Trigger: GCCACCATGGCCTGGGGACCAGCATGCTTGTCCCAAAGAACCCACAAGGGGAAGAAGACAGCAAGCTAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 90 bp | TGCAGTTTCTTCCTAGCTTGCTGTCTTCTTCCCCTTGTGGGTTCTTaGGGACAAGCATGCTGGTCCCCAGGCCATGGTGGCCTTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: CSFFLACCLLPLVGS*GQACWSPGHGGLLR Trigger: CCTCAGAAGGCCACCATGGCCTGGGGACCAGCATGCTTGTCCCAAAGAACCCACAAGGGGAAGAAGACAGCAAGCTAGGAAGAAACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 90 bp | AACTCAGACACGAAGGGCCTGCGTGTGAGGATTTCTCGGAAGGTGTaGGACAGCCATGTCGTTGGGATCACTACTGTGGTCTCTAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: NSDTKGLRVRISRKV*DSHVVGITTVVSRG Trigger: CCCCCTAGAGACCACAGTAGTGATCCCAACGACATGGCTGTCCAACACCTTCCGAGAAATCCTCACACGCAGGCCCTTCGTGTCTGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS TCA 72 bp | CGGGCTCCTGGGGATTCTCCATCACGTAGCACTCCTTaGGACTGTTGTCATCTTCCAGGATGGAGAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RAPGDSPSRSTP*DCCHLPGWRSW Trigger: CCAGCTTCTCCATCCTGGAAGATGACAACAGTCTCAAGGAGTGCTACGTGATGGAGAATCCCCAGGAGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CCA 72 bp | GGCCTTCCTCCAGCTGCAGCATCTGACTTAGTGTCTTaGCCACCACCATCTTCCGCTTCTGCACAAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: GLPPAAASDLVS*PPPSSASAQTP Trigger: TGGAGTTTGTGCAGAAGCGGAAGATGGTGGTGGCCAAGACACTAAGTCAGATGCTGCAGCTGGAGGAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CCA 72 bp | GCGTCCAGAAAGTTCAGCTTCTGCAACCCCAGCAGGTaGCCATACAAGGAGACCATAGACCTTGTGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: ASRKFSFCNPSR*PYKETIDLVPP Trigger: AGGTGGCACAAGGTCTATGGTCTCCTTGTATGGCCACCTGCTGGGGTTGCAGAAGCTGAACTTTCTGGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CCA 72 bp | GCCCAGTTCCAGCTCGTCAGGACTTCGCTCTACACCTaGAGCCTTGTACTTCTGGAAGGTGTCACTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: AQFQLVRTSLYT*SLVLLEGVTDE Trigger: CTCATCAGTGACACCTTCCAGAAGTACAAGGCTCCAGGTGTAGAGCGAAGTCCTGACGAGCTGGAACTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 72 bp | ACGAAGGGCCTGCGTGTGAGGATTTCTCGGAAGGTGTaGGACAGCCATGTCGTTGGGATCACTACTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TKGLRVRISRKV*DSHVVGITTVV Trigger: GACCACAGTAGTGATCCCAACGACATGGCTGTCCAACACCTTCCGAGAAATCCTCACACGCAGGCCCTTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS TCA 72 bp | GGAACTCCACCTCCAGTTCTTCCATGCCCTCTGGGTTaGGTGGGAACTTCACATGGGTTTTATTCCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GTPPPVLPCPLG*VGTSHGFYSGG Trigger: GCCTCCGGAATAAAACCCATGTGAAGTTCCCACTCAACCCAGAGGGCATGGAAGAACTGGAGGTGGAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS GCA 72 bp | GCAAAGCCTAAAGTTACAGTGGCTCTTAGGCGCCTCTaGGTAAAGCTGTGGCTGGGAGTACTTGGGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: AKPKVTVALRRL*VKLWLGVLGVV Trigger: CACTACCCCAAGTACTCCCAGCCACAGCTTTACGCAGAGGCGCCTAAGAGCCACTGTAACTTTAGGCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CCA 72 bp | GCTTGTCGAAGGCGGCCTCTGTGTACGTCAGCTCCTTaGTGGCATAGGGAGACTTTGGTCCATAGATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: ACRRRPLCTSAP*WHRETLVHRCS Trigger: TGAACATCTATGGACCAAAGTCTCCCTATGCCACCAAGGAGCTGACGTACACAGAGGCCGCCTTCGACAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 72 bp | TCCAGGCAAGAGACTTGGCGAGACACCAGCACGCCGTaGGTGATGAGGGTCTCTGATGAGGAGAAATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRQETWRDTSTP*VMRVSDEEKFS Trigger: AGAGAATTTCTCCTCATCAGAGACCCTCATCACCAACGGCGTGCTGGTGTCTCGCCAAGTCTCTTGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS GCA 72 bp | GATAAGGTCGACTTTTCTCTCTGGCCTAAGGAGGGGTaGGTAGCTGGAGTTGACAAAGAACGCAGTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DKVDFSLWPKEG*VAGVDKERSVQ Trigger: CTGGACACTGCGTTCTTTGTCAACTCCAGCTACGCACCCCTCCTTAGGCCAGAGAGAAAAGTCGACCTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 72 bp | AGGAACTCCACCTCCAGTTCTTCCATGCCCTCTGGGTaGAGTGGGAACTTCACATGGGTTTTATTCCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RNSTSSSSMPSG*SGNFTWVLFRR Trigger: CCTCCGGAATAAAACCCATGTGAAGTTCCCACTCAACCCAGAGGGCATGGAAGAACTGGAGGTGGAGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 72 bp | TGTCTCCGGGCCTCAAAGACAACAGTCTCCAGGTTTTaGGAGGACCACTCAGGATCACTGTACAAGGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: CLRASKTTVSRF*EDHSGSLYKVA Trigger: GGCTACCTTGTACAGTGATCCTGAGTGGTCCTCCAAAAACCTGGAGACTGTTGTCTTTGAGGCCCGGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 72 bp | GAAGGGGATCTTCTGCTCGGTACAGTACTCACAGGTTaGTTTCAGGGGCTTTGTCTGGGATCCTGCGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: EGDLLLGTVLTG*FQGLCLGSCAV Trigger: TACTGCGCAGGATCCCAGACAAAGCCCCTGAAACAAACCTGTGAGTACTGTACCGAGCAGAAGATCCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 90 bp | CCAAAAGTCTGTAAACGTGGTCTTATAGCCCTCCTGGCTATGCTTTaGGAGGTCCTCTCGCCATTTGTAGAGCTGATCTGGGAACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PKVCKRGLIALLAML*EVLSPFVELIWEQG Trigger: GCCCTGTTCCCAGATCAGCTCTACAAATGGCGAGAGGACCTCCAAAAGCATAGCCAGGAGGGCTATAAGACCACGTTTACAGACTTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS TCA 72 bp | AGAGCTGATCTGGGAACAGGGCAGGCATCTTGTCTTTaGCAACATGTCTCCGGGCCTCAAAGACAACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: RADLGTGQASCL*QHVSGPQRQQS Trigger: AGACTGTTGTCTTTGAGGCCCGGAGACATGTTGTCAAAGACAAGATGCCTGCCCTGTTCCCAGATCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS GCA 72 bp | TCAACAGATGGCATGGAGATGACCCCTCCTGAGAACTaGAAGAAGCCATGGAAAGTAAAGGTGAGGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: STDGMEMTPPEN*KKPWKVKVRRA Trigger: TGCCCTCCTCACCTTTACTTTCCATGGCTTCTTGCAGTTCTCAGGAGGGGTCATCTCCATGCCATCTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 90 bp | TGTGGGTCCTGTGCATCTTCAAATCCACTGCAGTTTCTTCCTAGCTaGCTGTCTTCTTCCCCTTGTGGGTTCTTTGGGACAAGCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: CGSCASSNPLQFLPS*LSSSPCGFFGTSML Trigger: CAGCATGCTTGTCCCAAAGAACCCACAAGGGGAAGAAGACAGCAAGCTAGGAAGAAACTGCAGTGGATTTGAAGATGCACAGGACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 90 bp | TCTTCGAGTAGGAACTCCACCTCCAGTTCTTCCATGCCCTCTGGGTaGAGTGGGAACTTCACATGGGTTTTATTCCGGAGGCAAAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SSSRNSTSSSSMPSG*SGNFTWVLFRRQSL Trigger: TAAGCTTTGCCTCCGGAATAAAACCCATGTGAAGTTCCCACTCAACCCAGAGGGCATGGAAGAACTGGAGGTGGAGTTCCTACTCGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 90 bp | TTGACAACATGTCTCCGGGCCTCAAAGACAACAGTCTCCAGGTTTTaGGAGGACCACTCAGGATCACTGTACAAGGTAGCCATAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LTTCLRASKTTVSRF*EDHSGSLYKVAIVQ Trigger: CTGGACTATGGCTACCTTGTACAGTGATCCTGAGTGGTCCTCCAAAAACCTGGAGACTGTTGTCTTTGAGGCCCGGAGACATGTTGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CCA 72 bp | TCTTCCATGCCCTCTGGGTTGAGTGGGAACTTCACATaGGTTTTATTCCGGAGGCAAAGCTTAGAGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSMPSGLSGNFT*VLFRRQSLERS Trigger: TGACCTCTCTAAGCTTTGCCTCCGGAATAAAACCCATGTGAAGTTCCCACTCAACCCAGAGGGCATGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CCA 72 bp | TCCAGCAGGTTCAGGTGTTTTGCAAACTGTGTCAGCTaGTTTGGGAAGGTGTCCAGTACTGTGTCTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SSRFRCFANCVS*FGKVSSTVSFH Trigger: GTGGAAAGACACAGTACTGGACACCTTCCCAAACCAGCTGACACAGTTTGCAAAACACCTGAACCTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 72 bp | AGAGAGGTCATAGAGGACTGTCAAGAGATGGTCATTTaGTGTCAGGGTGTCTTCGTCACAGACGCTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: REVIEDCQEMVI*CQGVFVTDAQL Trigger: GAGCTGAGCGTCTGTGACGAAGACACCCTGACACAAAATGACCATCTCTTGACAGTCCTCTATGACCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS TCA 72 bp | TCAGTATATCAGCCTGCCGGACGTTTTTCATGCCAATaGTCCTCACTGTCAACAGATGGCATGGAGATGACC | + |
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Preference number: 6 (lower is better) Translates to: SVYQPAGRFSCQ*SSLSTDGMEMT Trigger: GGTCATCTCCATGCCATCTGTTGACAGTGAGGATCATTGGCATGAAAAACGTCCGGCAGGCTGATATACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS TCA 72 bp | ATCACTGTACAAGGTAGCCATAGTCCAGGTTGCACCTaGCAAGCCGGTGATGTAAGTAGAAGCGTCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ITVQGSHSPGCT*QAGDVSRSVQK Trigger: TTTCTGGACGCTTCTACTTACATCACCGGCTTGTCAGGTGCAACCTGGACTATGGCTACCTTGTACAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CCA 72 bp | GTAATTGAGGTGGATGATAAGGTCGACTTTTCTCTCTaGCCTAAGGAGGGGTGCGTAGCTGGAGTTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: VIEVDDKVDFSL*PKEGCVAGVDK Trigger: TTTGTCAACTCCAGCTACGCACCCCTCCTTAGGCCAGAGAGAAAAGTCGACCTTATCATCCACCTCAATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS TCA 72 bp | CAGTCTCTCCCTTGTCCACCTATAGAAAAACTCCTCTaGGGTGTGAGACAAATTCCAGGCATCAAGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: QSLPCPPIEKLL*GVRQIPGIKQV Trigger: AACCTGCTTGATGCCTGGAATTTGTCTCACACCTCAGAGGAGTTTTTCTATAGGTGGACAAGGGAGAGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS GCA 72 bp | GTGCATCTTCAAATCCACTGCAGTTTCTTCCTAGCTTaGTGTCTTCTTCCCCTTGTGGGTTCTTTGGGACAA | + |
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Preference number: 6 (lower is better) Translates to: VHLQIHCSFFLA*CLLPLVGSLGQ Trigger: TTGTCCCAAAGAACCCACAAGGGGAAGAAGACAGCAAGCTAGGAAGAAACTGCAGTGGATTTGAAGATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS CAA 72 bp | TGTGCATCTTCAAATCCACTGCAGTTTCTTCCTAGCTaGCTGTCTTCTTCCCCTTGTGGGTTCTTTGGGACA | + |
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Preference number: 6 (lower is better) Translates to: CASSNPLQFLPS*LSSSPCGFFGT Trigger: TGTCCCAAAGAACCCACAAGGGGAAGAAGACAGCAAGCTAGGAAGAAACTGCAGTGGATTTGAAGATGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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| CDS TCA 72 bp | CTCATGCGTTTCTTCTCCATTGCTAGTCTCAAGGCCTaGATGAGCTTATCTCTGTTATTGAGGATATTATAT | + |
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Preference number: 6 (lower is better) Translates to: LMRFFSIASLKA*MSLSLLLRILY Trigger: ATATAATATCCTCAATAACAGAGATAAGCTCATTCAGGCCTTGAGACTAGCAATGGAGAAGAAACGCATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090071.5 |
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