Pregenerated sensors for PLA2G4D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070719Ensembl transcript IDs: ENSMUST00000094665.5
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAAGGATGGAGGGTGGGGTACGCCCTCTGGGCAGTGAGGCCAGCTaGAGTGGCTTCCATAGGTGTGCAAGACTGTCGCTCAGCCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GRMEGGVRPLGSEAS*SGFHRCARLSLSQA Trigger: GGCCTGGCTGAGCGACAGTCTTGCACACCTATGGAAGCCACTGCAGCTGGCCTCACTGCCCAGAGGGCGTACCCCACCCTCCATCCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CCA 90 bp | GAGGTATTCAATTCCTCTAGGACCAACTGGAAACACAGGGAAGGATaGAGGGTGGGGTACGCCCTCTGGGCAGTGAGGCCAGCTGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: EVFNSSRTNWKHREG*RVGYALWAVRPAAV Trigger: CACTGCAGCTGGCCTCACTGCCCAGAGGGCGTACCCCACCCTCCATCCTTCCCTGTGTTTCCAGTTGGTCCTAGAGGAATTGAATACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CCA 90 bp | GGGGTCCTTTCCCTCCAGCCAGAAATACAAATGTGGGTGGAGAACTaGAAGCTCCAGCCAAAGGCACTGCCACTGTGCCTAGATGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: GVLSLQPEIQMWVEN*KLQPKALPLCLDAG Trigger: GCCTGCATCTAGGCACAGTGGCAGTGCCTTTGGCTGGAGCTTCCAGTTCTCCACCCACATTTGTATTTCTGGCTGGAGGGAAAGGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR TCA 90 bp | ACTTTTAATCCCAGCACTCGCAGAGGCACAGGCAGGCAGATCCGGTaGGTCTGTGGCCATTTGGGTCTATATAATGAGATCCAGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: TFNPSTRRGTGRQIR*VCGHLGLYNEIQAS Trigger: GCTGGCCTGGATCTCATTATATAGACCCAAATGGCCACAGACTCACCGGATCTGCCTGCCTGTGCCTCTGCGAGTGCTGGGATTAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CCA 90 bp | AAGAGTGAGACTATCCCATCTTTAAGGGGATGTGATGCCCTCTTCTaGCACTTGGGTGTACATGCAGACAGAGCAACTTGTATATTAAAT | + |
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Preference number: 1 (lower is better) Translates to: KSETIPSLRGCDALF*HLGVHADRATCILN Trigger: ATTTAATATACAAGTTGCTCTGTCTGCATGTACACCCAAGTGCCAGAAGAGGGCATCACATCCCCTTAAAGATGGGATAGTCTCACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR-3UTR CCA 90 bp | GCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCTAGGACCGTGGGGTACGCCCTCTaGGCAGTGAGGCCAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: AIRCLMYVSQEVFNSSRTVGYAL*AVRPAA Trigger: TGCAGCTGGCCTCACTGCCCAGAGGGCGTACCCCAC...GGTCCTAGAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCTGCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCATGTGGGTGGAGAACTaGAAGCTCCAGCCAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VCCHQVSYVRVTGGIQFLMWVEN*KLQPKA Trigger: TGCCTTTGGCTGGAGCTTCCAGTTCTCCACCCACAT...GAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGCAGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR-3UTR CCA 90 bp | TTCAATTCCTCTAGGACCAACTGGAAACACAGGGAAGGATGGAGGGTGGGGTACCCAGAAATACAAATGTaGGTGGAGAACTGGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: FNSSRTNWKHREGWRVGYPEIQM*VENWKL Trigger: GAGCTTCCAGTTCTCCACCCACATTTGTATTTCTGG...GTACCCCACCCTCCATCCTTCCCTGTGTTTCCAGTTGGTCCTAGAGGAATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR-3UTR CCA 90 bp | GCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCTAGGACCTGGAGGATCATAGTGTaGTCTTCAGAGCCTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: AIRCLMYVSQEVFNSSRTWRIIV*SSEPQR Trigger: TCTCTGAGGCTCTGAAGACCACACTATGATCCTCCA...GGTCCTAGAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGCACTTGGGTGTACATGCAGACAGAGCAACTTGTATATTAAATAAATTAGGGAAGGATGGAGGGTaGGGTACGCCCTCTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: FWHLGVHADRATCILNKLGKDGG*GTPSGQ Trigger: CTGCCCAGAGGGCGTACCCCACCCTCCATCCTTCCC...TAATTTATTTAATATACAAGTTGCTCTGTCTGCATGTACACCCAAGTGCCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CAA 90 bp | GAGACTATCCCATCTTTAAGGGGATGTGATGCCCTCTTCTGGCACTaGGGTGTACATGCAGACAGAGCAACTTGTATATTAAATAAATTA | + |
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Preference number: 2 (lower is better) Translates to: ETIPSLRGCDALFWH*GVHADRATCILNKL Trigger: TAATTTATTTAATATACAAGTTGCTCTGTCTGCATGTACACCCAAGTGCCAGAAGAGGGCATCACATCCCCTTAAAGATGGGATAGTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGCACTTGGGTGTACATGCAGACAGAGCAACTTGTATATTAAATAAATTAAAATACAAATGTGGGTaGAGAACTGGAAGCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: FWHLGVHADRATCILNKLKYKCG*RTGSSS Trigger: GCTGGAGCTTCCAGTTCTCCACCCACATTTGTATTT...TAATTTATTTAATATACAAGTTGCTCTGTCTGCATGTACACCCAAGTGCCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CCA 72 bp | AATTCCTCTAGGACCAACTGGAAACACAGGGAAGGATaGAGGGTGGGGTACGCCCTCTGGGCAGTGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: NSSRTNWKHREG*RVGYALWAVRP Trigger: TGGCCTCACTGCCCAGAGGGCGTACCCCACCCTCCATCCTTCCCTGTGTTTCCAGTTGGTCCTAGAGGAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR-3UTR CAA 90 bp | GGCCCTGAGGAAGCTGAGCCCCATGGAAGGGGTCCTTTCCCTCCAGCCAGAAATTTAAGCCCTTGGAAGTaGGAGGATCATAGTGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: GPEEAEPHGRGPFPPARNLSPWK*EDHSVV Trigger: GACCACACTATGATCCTCCAACTTCCAAGGGCTTAA...ATTTCTGGCTGGAGGGAAAGGACCCCTTCCATGGGGCTCAGCTTCCTCAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CCA 72 bp | GCACAGGCAGGCAGATCCGGTGAGTCTGTGGCCATTTaGGTCTATATAATGAGATCCAGGCCAGCCAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: AQAGRSGESVAI*VYIMRSRPARD Trigger: ATCCCTGGCTGGCCTGGATCTCATTATATAGACCCAAATGGCCACAGACTCACCGGATCTGCCTGCCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CCA 72 bp | TCCCTCCAGCCAGAAATACAAATGTGGGTGGAGAACTaGAAGCTCCAGCCAAAGGCACTGCCACTGTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: SLQPEIQMWVEN*KLQPKALPLCL Trigger: TAGGCACAGTGGCAGTGCCTTTGGCTGGAGCTTCCAGTTCTCCACCCACATTTGTATTTCTGGCTGGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CCA 72 bp | GAAGGGGTCCTTTCCCTCCAGCCAGAAATACAAATGTaGGTGGAGAACTGGAAGCTCCAGCCAAAGGCACTG | + |
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Preference number: 3 (lower is better) Translates to: EGVLSLQPEIQM*VENWKLQPKAL Trigger: CAGTGCCTTTGGCTGGAGCTTCCAGTTCTCCACCCACATTTGTATTTCTGGCTGGAGGGAAAGGACCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CCA 72 bp | GTGTCACAGGAGGTATTCAATTCCTCTAGGACCAACTaGAAACACAGGGAAGGATGGAGGGTGGGGTACGCC | + |
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Preference number: 3 (lower is better) Translates to: VSQEVFNSSRTN*KHREGWRVGYA Trigger: GGCGTACCCCACCCTCCATCCTTCCCTGTGTTTCCAGTTGGTCCTAGAGGAATTGAATACCTCCTGTGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR CCA 72 bp | ACTATCCCATCTTTAAGGGGATGTGATGCCCTCTTCTaGCACTTGGGTGTACATGCAGACAGAGCAACTTGT | + |
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Preference number: 3 (lower is better) Translates to: TIPSLRGCDALF*HLGVHADRATC Trigger: ACAAGTTGCTCTGTCTGCATGTACACCCAAGTGCCAGAAGAGGGCATCACATCCCCTTAAAGATGGGATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| 3UTR TCA 72 bp | CCACTTAAGATTGAACAGCAAAACGGTAGGAAGCCTTaGTGCTGTCCTTCCATATCAGAAATAAAACCAAGG | + |
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Preference number: 3 (lower is better) Translates to: PLKIEQQNGRKP*CCPSISEIKPR Trigger: CCTTGGTTTTATTTCTGATATGGAAGGACAGCATCAAGGCTTCCTACCGTTTTGCTGTTCAATCTTAAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR GCA 90 bp | TTCCATAGGTGTGCAAGACTGTCGCTCAGCCAGGCCCTGAGGAAGCTGAGCCCCTCCAGTTGCAGAGCCTaGTTCAGGGCGGCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: FHRCARLSLSQALRKLSPSSCRA*FRAAAT Trigger: GGTGGCTGCCGCCCTGAAGCAGGCTCTGCAACTGGA...GGGGCTCAGCTTCCTCAGGGCCTGGCTGAGCGACAGTCTTGCACACCTATGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | CAGAAATACAAATGTGGGTGGAGAACTGGAAGCTCCAGCCAAAGGCACTGCCACCTGGCTGTGGTCCTCTaGGCTGGGCTCCACACGGGG | + |
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Preference number: 4 (lower is better) Translates to: QKYKCGWRTGSSSQRHCHLAVVL*AGLHTG Trigger: CCCCGTGTGGAGCCCAGCCCAGAGGACCACAGCCAG...GTGGCAGTGCCTTTGGCTGGAGCTTCCAGTTCTCCACCCACATTTGTATTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR GCA 90 bp | TTCCATAGGTGTGCAAGACTGTCGCTCAGCCAGGCCCTGAGGAAGCTGAGCCCCCCTGTGAGATTCACCTaGCCAGCCTTGAGCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: FHRCARLSLSQALRKLSPPVRFT*PALSSS Trigger: TGATGAGCTCAAGGCTGGGCAGGTGAATCTCACAGG...GGGGCTCAGCTTCCTCAGGGCCTGGCTGAGCGACAGTCTTGCACACCTATGGAA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | TTCCATAGGTGTGCAAGACTGTCGCTCAGCCAGGCCCTGAGGAAGCTGAGCCCCTGTCACCGAGGTATCTaGGTTCCAGCCACTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FHRCARLSLSQALRKLSPCHRGI*VPATVS Trigger: AGAAACAGTGGCTGGAACTCAGATACCTCGGTGACA...GGGGCTCAGCTTCCTCAGGGCCTGGCTGAGCGACAGTCTTGCACACCTATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGAAGCTGAGCCCCATGGAAGGGGTCCTTTCCCTCCAGCCAGAAATACAAGGGTCCCTGTACAGGTaGGCCATTGTCCATGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: LRKLSPMEGVLSLQPEIQGSLYR*AIVHVE Trigger: CTCTACATGGACAATGGCCCACCTGTACAGGGACCC...TTGTATTTCTGGCTGGAGGGAAAGGACCCCTTCCATGGGGCTCAGCTTCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGAAGCTGAGCCCCATGGAAGGGGTCCTTTCCCTCCAGCCAGAAATACAATGCAGCTCTCTGTCCTaGCAGCTTCTGATCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LRKLSPMEGVLSLQPEIQCSSLS*QLLICH Trigger: GTGACAGATCAGAAGCTGTCAGGACAGAGAGCTGCA...TTGTATTTCTGGCTGGAGGGAAAGGACCCCTTCCATGGGGCTCAGCTTCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | TTCAATTCCTCTAGGACCAACTGGAAACACAGGGAAGGATGGAGGGTGGGGTACCGGGCAGGTGGGGTCTaGGAAGAGGTAACATTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FNSSRTNWKHREGWRVGYRAGGV*EEVTFL Trigger: CAGGAATGTTACCTCTTCTCAGACCCCACCTGCCCG...GTACCCCACCCTCCATCCTTCCCTGTGTTTCCAGTTGGTCCTAGAGGAATTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR GCA 90 bp | GTCTGCTGCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCTTTGTCCTGGCCTGCTaGCATGGCGGTGTTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: VCCHQVSYVRVTGGIQFLFVLAC*HGGVPG Trigger: GCCGGGAACACCGCCATGGCAGCAGGCCAGGACAAA...GAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGCAGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR GCA 90 bp | CAGAAATACAAATGTGGGTGGAGAACTGGAAGCTCCAGCCAAAGGCACTGCCACTCTGTCACCTGCCCATaGAGCTTGGACTCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: QKYKCGWRTGSSSQRHCHSVTCP*SLDSST Trigger: GGTGCTGGAGTCCAAGCTGCATGGGCAGGTGACAGA...GTGGCAGTGCCTTTGGCTGGAGCTTCCAGTTCTCCACCCACATTTGTATTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | ATGTCCATTAGCAGTGAACAGTCTGCTGCCATCAGGTGTCTTATGTACGTGTCACCTGCCCATGCAGCTTaGACTCCAGCACCAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: MSISSEQSAAIRCLMYVSPAHAA*TPAPGP Trigger: GGGGCCTGGTGCTGGAGTCCAAGCTGCATGGGCAGG...TGACACGTACATAAGACACCTGATGGCAGCAGACTGTTCACTGCTAATGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR GCA 90 bp | GGCCAGCCAGGGATGAAGAGTGAGACTATCCCATCTTTAAGGGGATGTGATGCCGCAGGCCCCGAGCTCTaGTGTATTTCTCAGATTGCT | + |
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Preference number: 4 (lower is better) Translates to: GQPGMKSETIPSLRGCDAAGPEL*CISQIA Trigger: AGCAATCTGAGAAATACAGCAGAGCTCGGGGCCTGC...GGCATCACATCCCCTTAAAGATGGGATAGTCTCACTCTTCATCCCTGGCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | GTCTGCTGCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCAGCTCTAGTTTGTCCTaGCCTGCTGCCATGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: VCCHQVSYVRVTGGIQFLSSSLS*PAAMAV Trigger: CACCGCCATGGCAGCAGGCCAGGACAAACTAGAGCT...GAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGCAGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | CTGAGCCCCATGGAAGGGGTCCTTTCCCTCCAGCCAGAAATACAAATGTGGGTGAGAATGTTCTTGACCTaGCTCTGGATGAGGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: LSPMEGVLSLQPEIQMWVRMFLT*LWMRKL Trigger: CAGTTTCCTCATCCAGAGTCAGGTCAAGAACATTCT...CACCCACATTTGTATTTCTGGCTGGAGGGAAAGGACCCCTTCCATGGGGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | ATCCCATCTTTAAGGGGATGTGATGCCCTCTTCTGGCACTTGGGTGTACATGCACCTGAGGATTCAGGCTaGAGGTTTTCTGGAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: IPSLRGCDALFWHLGVHAPEDSG*RFSGAA Trigger: AGCTGCTCCAGAAAACCTTCAGCCTGAATCCTCAGG...TGCATGTACACCCAAGTGCCAGAAGAGGGCATCACATCCCCTTAAAGATGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | GCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCTAGGACCTGTCCTGACAGCTTCTaGTCTGTCACCTGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: AIRCLMYVSQEVFNSSRTCPDSF*SVTCPC Trigger: GCATGGGCAGGTGACAGATCAGAAGCTGTCAGGACA...GGTCCTAGAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | ATGTCCATTAGCAGTGAACAGTCTGCTGCCATCAGGTGTCTTATGTACGTGTCATCAATTAGGCAGAGCTaGGGGTCCTGTGGGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: MSISSEQSAAIRCLMYVSSIRQS*GSCGVS Trigger: GCTGACCCCACAGGACCCTCAGCTCTGCCTAATTGA...TGACACGTACATAAGACACCTGATGGCAGCAGACTGTTCACTGCTAATGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | CAGAAATACAAATGTGGGTGGAGAACTGGAAGCTCCAGCCAAAGGCACTGCCACGGTGATGAGGTTTTCTaGAGGGTCCCACGTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QKYKCGWRTGSSSQRHCHGDEVF*RVPRSF Trigger: GAAAGAACGTGGGACCCTCCAGAAAACCTCATCACC...GTGGCAGTGCCTTTGGCTGGAGCTTCCAGTTCTCCACCCACATTTGTATTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | ATGTCCATTAGCAGTGAACAGTCTGCTGCCATCAGGTGTCTTATGTACGTGTCAGGCCATGGAGGAAGTTaGCGCTACGCTGGTGGAATG | + |
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Preference number: 4 (lower is better) Translates to: MSISSEQSAAIRCLMYVSGHGGS*RYAGGM Trigger: CATTCCACCAGCGTAGCGCCAACTTCCTCCATGGCC...TGACACGTACATAAGACACCTGATGGCAGCAGACTGTTCACTGCTAATGGACAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | TCTAGTCAGGGCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACCAGGAAGGGAGGCAGCCCCTGTaGGATTCACCTGCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SSQGNSVRTRNKTHSNQEGRQPL*DSPAQP Trigger: AGGCTGGGCAGGTGAATCTCACAGGGGCTGCCTCCC...TTCCTGGTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGCCCTGACTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | ATCCCATCTTTAAGGGGATGTGATGCCCTCTTCTGGCACTTGGGTGTACATGCACTGCAGCTTCCCTTCTaGAGCCTTCATAGCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: IPSLRGCDALFWHLGVHALQLPF*SLHSRN Trigger: ATTCCTGCTATGAAGGCTCCAGAAGGGAAGCTGCAG...TGCATGTACACCCAAGTGCCAGAAGAGGGCATCACATCCCCTTAAAGATGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | GTCTGCTGCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCCTGTGTGTCCTCATATaGCCCCTTCAGCATAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VCCHQVSYVRVTGGIQFLLCVLI*PLQHKL Trigger: GAGCTTATGCTGAAGGGGTCATATGAGGACACACAG...GAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGCAGCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | ACAAAAACTAAGGAGATGTCCATTAGCAGTGAACAGTCTGCTGCCATCAGGTGTAAGCCCTTAAGTGCCTaGGCCAGAGCTGTTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TKTKEMSISSEQSAAIRCKPLSA*ARAVPD Trigger: GTCTGGAACAGCTCTGGCCCAGGCACTTAAGGGCTT...ACACCTGATGGCAGCAGACTGTTCACTGCTAATGGACATCTCCTTAGTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | ATGTCCATTAGCAGTGAACAGTCTGCTGCCATCAGGTGTCTTATGTACGTGTCATGCAATCCGCCCAGGTaGAGAAGTGTCTCTGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: MSISSEQSAAIRCLMYVSCNPPR*RSVSGY Trigger: GTAACCAGAGACACTTCTCCACCTGGGCGGATTGCA...TGACACGTACATAAGACACCTGATGGCAGCAGACTGTTCACTGCTAATGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | ACAAAAACTAAGGAGATGTCCATTAGCAGTGAACAGTCTGCTGCCATCAGGTGTATTATGAGGTCCACTTaGCGACCTGGGCGGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: TKTKEMSISSEQSAAIRCIMRST*RPGRNR Trigger: CCTGTTCCGCCCAGGTCGCCAAGTGGACCTCATAAT...ACACCTGATGGCAGCAGACTGTTCACTGCTAATGGACATCTCCTTAGTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | CAGAAATACAAATGTGGGTGGAGAACTGGAAGCTCCAGCCAAAGGCACTGCCACCACAGGGAAATTGTTTaGGTCTTTCCCATAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QKYKCGWRTGSSSQRHCHHREIV*VFPIGD Trigger: ATCACCTATGGGAAAGACTCAAACAATTTCCCTGTG...GTGGCAGTGCCTTTGGCTGGAGCTTCCAGTTCTCCACCCACATTTGTATTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | GCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACCAGGAAGGAGGAAGGATCCAGCCACTGTTTCTaGGGCCCCTCAGGTACCCAT | + |
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Preference number: 4 (lower is better) Translates to: AIQSEQEIKHIRTRKEEGSSHCF*GPSGTH Trigger: ATGGGTACCTGAGGGGCCCCAGAAACAGTGGCTGGA...TCCTTCCTCCTTCCTGGTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR TCA 90 bp | ATGTCCATTAGCAGTGAACAGTCTGCTGCCATCAGGTGTCTTATGTACGTGTCATCGTTCCACACAGGATaGCTGGAGTTAGTGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSISSEQSAAIRCLMYVSSFHTG*LELVTV Trigger: AACAGTCACTAACTCCAGTCATCCTGTGTGGAACGA...TGACACGTACATAAGACACCTGATGGCAGCAGACTGTTCACTGCTAATGGACAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR TCA 90 bp | GCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACCAGGAAGGAGGAAGGAACACCAGGGGCTGAGTaGTCCCTGAAGGAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: AIQSEQEIKHIRTRKEEGTPGAE*SLKESL Trigger: CAATGACTCCTTCAGGGATCACTCAGCCCCTGGTGT...TCCTTCCTCCTTCCTGGTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR GCA 90 bp | ATCCCATCTTTAAGGGGATGTGATGCCCTCTTCTGGCACTTGGGTGTACATGCATCACAGAGAAAAGGTTaGTCCAGATACCTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPSLRGCDALFWHLGVHASQRKG*SRYLPE Trigger: TTCTGGAAGGTATCTGGAGCAACCTTTTCTCTGTGA...TGCATGTACACCCAAGTGCCAGAAGAGGGCATCACATCCCCTTAAAGATGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | GTCTGCTGCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCTGGAGGGTTTCCAGATaGTTCTCTTTGACATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCCHQVSYVRVTGGIQFLWRVSR*FSLTLR Trigger: CCTCAATGTCAAAGAGAACCATCTGGAAACCCTCCA...GAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGCAGCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR CCA 90 bp | CAGGATTCTAGTCAGGGCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACGCTACGCTGGTGGAATaGCCTGCCAGTCAGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QDSSQGNSVRTRNKTHSNATLVE*PASQKA Trigger: GGCTTTCTGACTGGCAGGCCATTCCACCAGCGTAGC...GTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGCCCTGACTAGAATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CCA 90 bp | ATATCAGAAATAAAACCAAGGATGGCTACTCTTGCCGTGTCCGTGGAGCACAATCATTCCAGAAGCTGTTaGCAGCTGCACAGTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: ISEIKPRMATLAVSVEHNHSRSC*QLHSHI Trigger: TATGTGACTGTGCAGCTGCCAACAGCTTCTGGAATG...ATTGTGCTCCACGGACACGGCAAGAGTAGCCATCCTTGGTTTTATTTCTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR CCA 90 bp | TTCTGGCACTTGGGTGTACATGCAGACAGAGCAACTTGTATATTAAATAAATTATGCAGCTGGAGGCCATaGAGGAAGTTGGCGCTACGC | + |
|
Preference number: 4 (lower is better) Translates to: FWHLGVHADRATCILNKLCSWRP*RKLALR Trigger: GCGTAGCGCCAACTTCCTCCATGGCCTCCAGCTGCA...TAATTTATTTAATATACAAGTTGCTCTGTCTGCATGTACACCCAAGTGCCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| 3UTR CAA 72 bp | CCATCTTTAAGGGGATGTGATGCCCTCTTCTGGCACTaGGGTGTACATGCAGACAGAGCAACTTGTATATTA | + |
|
Preference number: 4 (lower is better) Translates to: PSLRGCDALFWH*GVHADRATCIL Trigger: TAATATACAAGTTGCTCTGTCTGCATGTACACCCAAGTGCCAGAAGAGGGCATCACATCCCCTTAAAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR TCA 90 bp | GCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACCAGGAAGGAGGAAGGAAACTCTTCTGGTCCCTaGGGATTCAGGCTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AIQSEQEIKHIRTRKEEGNSSGP*GFRLKV Trigger: AACCTTCAGCCTGAATCCTCAGGGACCAGAAGAGTT...TCCTTCCTCCTTCCTGGTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR TCA 90 bp | CAGGATTCTAGTCAGGGCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACTCATCAGCCGTCCCATaGAGAACTCAGAGCCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QDSSQGNSVRTRNKTHSNSSAVP*RTQSRR Trigger: TCTTCGGCTCTGAGTTCTTCATGGGACGGCTGATGA...GTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGCCCTGACTAGAATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR GCA 90 bp | TTCTGGCACTTGGGTGTACATGCAGACAGAGCAACTTGTATATTAAATAAATTAACTGTCCTCAGGGCCTaGAGGATAGTGCCCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FWHLGVHADRATCILNKLTVLRA*RIVPWL Trigger: CAACCAGGGCACTATCCTGCAGGCCCTGAGGACAGT...TAATTTATTTAATATACAAGTTGCTCTGTCTGCATGTACACCCAAGTGCCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR CCA 90 bp | CCTTTTTATGATATCACTAACAACAAAACCACTCAACAAACTAGGGACAGAACAGTGCTTCCGGGCAGGTaGGGTCTGAGAAGAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFYDITNNKTTQQTRDRTVLPGR*GLRRGN Trigger: GTTACCTCTTCTCAGACCCCACCTGCCCGGAAGCAC...TGTTCTGTCCCTAGTTTGTTGAGTGGTTTTGTTGTTAGTGATATCATAAAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR TCA 90 bp | ATATCAGAAATAAAACCAAGGATGGCTACTCTTGCCGTGTCCGTGGAGCACAATAGTCTTTCCCATAGGTaGTGTCATACCAGATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISEIKPRMATLAVSVEHNSLSHR*CHTRYP Trigger: TGGATATCTGGTATGACATCACCTATGGGAAAGACT...ATTGTGCTCCACGGACACGGCAAGAGTAGCCATCCTTGGTTTTATTTCTGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR GCA 90 bp | CCTTTTTATGATATCACTAACAACAAAACCACTCAACAAACTAGGGACAGAACACAGAAAGCCCTTAAGTaGCTGGGCCAGAGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFYDITNNKTTQQTRDRTQKALK*LGQSCS Trigger: GGAACAGCTCTGGCCCAGGCACTTAAGGGCTTTCTG...TGTTCTGTCCCTAGTTTGTTGAGTGGTTTTGTTGTTAGTGATATCATAAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR GCA 90 bp | GCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACCAGGAAGGAGGAAGGACTGTATTTCTCAGATTaGTGCAGCCCCTTAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AIQSEQEIKHIRTRKEEGLYFSD*CSPLKG Trigger: TCCCTTTAAGGGGCTGCAGCAATCTGAGAAATACAG...TCCTTCCTCCTTCCTGGTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCAGGGCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACCAGGAAGAGTTAGTGACTGTTTaGGTCTTGAATTTCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSQGNSVRTRNKTHSNQEELVTV*VLNFIP Trigger: TGGAATGAAATTCAAGACCCAAACAGTCACTAACTC...TTCCTGGTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGCCCTGACTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR TCA 90 bp | CCTTTTTATGATATCACTAACAACAAAACCACTCAACAAACTAGGGACAGAACACATCATAAGAAACCTTaGAGCAGATGTCATCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PFYDITNNKTTQQTRDRTHHKKP*SRCHLS Trigger: CGAAAGATGACATCTGCTTCAAGGTTTCTTATGATG...TGTTCTGTCCCTAGTTTGTTGAGTGGTTTTGTTGTTAGTGATATCATAAAAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS TCA 90 bp | CATGCAGCTTGGACTCCAGCACCAGGCCCCACAGGTCTGCTACCGTaGCGGTGTAGCCCTGCTCTTCCCGAAGCTTCAGTGTCTGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HAAWTPAPGPTGLLP*RCSPALPEASVSGG Trigger: ACCGCCAGACACTGAAGCTTCGGGAAGAGCAGGGCTACACCGTCACGGTAGCAGACCTGTGGGGCCTGGTGCTGGAGTCCAAGCTGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS GCA 90 bp | CACCTGCCCATGCAGCTTGGACTCCAGCACCAGGCCCCACAGGTCTaGTACCGTGACGGTGTAGCCCTGCTCTTCCCGAAGCTTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HLPMQLGLQHQAPQV*YRDGVALLFPKLQC Trigger: ACACTGAAGCTTCGGGAAGAGCAGGGCTACACCGTCACGGTAGCAGACCTGTGGGGCCTGGTGCTGGAGTCCAAGCTGCATGGGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS CCA 90 bp | TCCCGGTGCAGCTGGAGGCCATGGAGGAAGTTGGCGCTACGCTGGTaGAATGGCCTGCCAGTCAGAAAGCCCTTAAGTGCCTGGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRCSWRPWRKLALRW*NGLPVRKPLSAWAR Trigger: TCTGGCCCAGGCACTTAAGGGCTTTCTGACTGGCAGGCCATTCCACCAGCGTAGCGCCAACTTCCTCCATGGCCTCCAGCTGCACCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS CCA 90 bp | GTGCAGCTGGAGGCCATGGAGGAAGTTGGCGCTACGCTGGTGGAATaGCCTGCCAGTCAGAAAGCCCTTAAGTGCCTGGGCCAGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VQLEAMEEVGATLVE*PASQKALKCLGQSC Trigger: ACAGCTCTGGCCCAGGCACTTAAGGGCTTTCTGACTGGCAGGCCATTCCACCAGCGTAGCGCCAACTTCCTCCATGGCCTCCAGCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS TCA 90 bp | ACAGGTCAGCCCTGGGCAGACTCCGAGCCTCCAGGATTTTCACAGTaGGCCGGCAGAAGACAGAGGCCTCCTCCTGGTAAGGATGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TGQPWADSEPPGFSQ*AGRRQRPPPGKDGH Trigger: ATGGCCATCCTTACCAGGAGGAGGCCTCTGTCTTCTGCCGGCTCACTGTGAAAATCCTGGAGGCTCGGAGTCTGCCCAGGGCTGACCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS CCA 90 bp | GGGTCAGCTGATTCGGGGTGTCATCTAGGTTGCAATCCGCCCAGGTaGAGAAGTGTCTCTGGTTACAGTAGTCCCGGTGCAGCTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSADSGCHLGCNPPR*RSVSGYSSPGAAGG Trigger: GCCTCCAGCTGCACCGGGACTACTGTAACCAGAGACACTTCTCCACCTGGGCGGATTGCAACCTAGATGACACCCCGAATCAGCTGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS GCA 90 bp | GCTGAGGGTCCTGTGGGGTCAGCTGATTCGGGGTGTCATCTAGGTTaGAATCCGCCCAGGTGGAGAAGTGTCTCTGGTTACAGTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AEGPVGSADSGCHLG*NPPRWRSVSGYSSP Trigger: GGGACTACTGTAACCAGAGACACTTCTCCACCTGGGCGGATTGCAACCTAGATGACACCCCGAATCAGCTGACCCCACAGGACCCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 90 bp | TCCTCATATGACCCCTTCAGCATAAGCTCCAGCTCTAGTTTGTCCTaGCCTGCTGCCATGGCGGTGTTCCCGGCTCTGTCCAGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SSYDPFSISSSSSLS*PAAMAVFPALSRET Trigger: TGTCTCCCTGGACAGAGCCGGGAACACCGCCATGGCAGCAGGCCAGGACAAACTAGAGCTGGAGCTTATGCTGAAGGGGTCATATGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS TCA 90 bp | CACATGCTCCCTAGCATGACTGATGGGTCCTTCGAGGTCCCTCTGTaGCCACTCTGGGTCCCTGTACAGGTGGGCCATTGTCCATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HMLPSMTDGSFEVPL*PLWVPVQVGHCPCR Trigger: TCTACATGGACAATGGCCCACCTGTACAGGGACCCAGAGTGGTCACAGAGGGACCTCGAAGGACCCATCAGTCATGCTAGGGAGCATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS GCA 90 bp | TTTCATTCCAGAAGCTGTTGGCAGCTGCACAGTCACATAGGGATCTaGCTGACTCAACAGGTCAGCCCTGGGCAGACTCCGAGCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FHSRSCWQLHSHIGI*LTQQVSPGQTPSLQ Trigger: CTGGAGGCTCGGAGTCTGCCCAGGGCTGACCTGTTGAGTCAGGCAGATCCCTATGTGACTGTGCAGCTGCCAACAGCTTCTGGAATGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | TTCCATAGGTGTGCAAGACTGTCGCTCAGCCAGGCCCTGAGGAAGCTGAGCCCCCGGGCCACAAGAACATaGTTGGTGATGAGGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FHRCARLSLSQALRKLSPRATRT*LVMRFS Trigger: AGAAAACCTCATCACCAACAATGTTCTTGTGGCCCG...GGGGCTCAGCTTCCTCAGGGCCTGGCTGAGCGACAGTCTTGCACACCTATGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | GTCTGCTGCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCACCTGCCCATGCAGCTaGGACTCCAGCACCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCCHQVSYVRVTGGIQFLTCPCS*DSSTRP Trigger: GGGCCTGGTGCTGGAGTCCAAGCTGCATGGGCAGGT...GAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGCAGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | ATCCCATCTTTAAGGGGATGTGATGCCCTCTTCTGGCACTTGGGTGTACATGCATTCACCTGCCCAGCCTaGAGCTCATCAGGGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: IPSLRGCDALFWHLGVHAFTCPA*SSSGLR Trigger: GCGCAGCCCTGATGAGCTCAAGGCTGGGCAGGTGAA...TGCATGTACACCCAAGTGCCAGAAGAGGGCATCACATCCCCTTAAAGATGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 90 bp | GGATTGGTTGTAATTGAAGGAGATTATGAGGTCCACTTGGCGACCTaGGCGGAACAGGGAGGGACAGCTGCTGTTCATGAAGCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLVVIEGDYEVHLAT*AEQGGTAAVHEAAS Trigger: GCTGGCTGCTTCATGAACAGCAGCTGTCCCTCCCTGTTCCGCCCAGGTCGCCAAGTGGACCTCATAATCTCCTTCAATTACAACCAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | ATCCCATCTTTAAGGGGATGTGATGCCCTCTTCTGGCACTTGGGTGTACATGCAGTGTCTGGCGGTAGCTaGCCAAGTGTTCGGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPSLRGCDALFWHLGVHAVSGGS*PSVRGG Trigger: TCCTCCCCGAACACTTGGCAAGCTACCGCCAGACAC...TGCATGTACACCCAAGTGCCAGAAGAGGGCATCACATCCCCTTAAAGATGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 90 bp | CAGCTCTTTGGGGCAACAGTCTGTCTTAAGCTGCAGCTTCCCTTCTaGAGCCTTCATAGCAGGAATGTCTATGGTCATCTCCTTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLFGATVCLKLQLPF*SLHSRNVYGHLLPC Trigger: GCAGGGAAGGAGATGACCATAGACATTCCTGCTATGAAGGCTCCAGAAGGGAAGCTGCAGCTTAAGACAGACTGTTGCCCCAAAGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | ATGTCCATTAGCAGTGAACAGTCTGCTGCCATCAGGTGTCTTATGTACGTGTCACCTCCTCCCTCAGCATaGATGCCCACAACAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: MSISSEQSAAIRCLMYVSPPPSA*MPTTGT Trigger: GGTCCCTGTTGTGGGCATCAATGCTGAGGGAGGAGG...TGACACGTACATAAGACACCTGATGGCAGCAGACTGTTCACTGCTAATGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | GCCATCAGGTGTCTTATGTACGTGTCACAGGAGGTATTCAATTCCTCTAGGACCAGGCCATGGAGGAAGTaGGCGCTACGCTGGTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AIRCLMYVSQEVFNSSRTRPWRK*ALRWWN Trigger: ATTCCACCAGCGTAGCGCCAACTTCCTCCATGGCCT...GGTCCTAGAGGAATTGAATACCTCCTGTGACACGTACATAAGACACCTGATGGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | ACAAAAACTAAGGAGATGTCCATTAGCAGTGAACAGTCTGCTGCCATCAGGTGTTCCCTGAAGGAGTCATaGACCAGCGGGAAGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKTKEMSISSEQSAAIRCSLKES*TSGKCS Trigger: GCTGCACTTCCCGCTGGTCAATGACTCCTTCAGGGA...ACACCTGATGGCAGCAGACTGTTCACTGCTAATGGACATCTCCTTAGTTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS TCA 90 bp | TTAGGAGCTCCACATCTAACTCTTCTGGTCCCTGAGGATTCAGGCTaGAGGTTTTCTGGAGCAGCTGTCCAGGAAGGATTTCTGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LGAPHLTLLVPEDSG*RFSGAAVQEGFLRH Trigger: ATGTCTCAGAAATCCTTCCTGGACAGCTGCTCCAGAAAACCTTCAGCCTGAATCCTCAGGGACCAGAAGAGTTAGATGTGGAGCTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | TTCAATTCCTCTAGGACCAACTGGAAACACAGGGAAGGATGGAGGGTGGGGTACGCCACAAGAACATTGTaGGTGATGAGGTTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FNSSRTNWKHREGWRVGYATRTL*VMRFSG Trigger: TCCAGAAAACCTCATCACCAACAATGTTCTTGTGGC...GTACCCCACCCTCCATCCTTCCCTGTGTTTCCAGTTGGTCCTAGAGGAATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | CTGAGCCCCATGGAAGGGGTCCTTTCCCTCCAGCCAGAAATACAAATGTGGGTGCTTAAAGGGAAGGGATaGGTTGTAATTGAAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSPMEGVLSLQPEIQMWVLKGKG*VVIEGD Trigger: ATCTCCTTCAATTACAACCAATCCCTTCCCTTTAAG...CACCCACATTTGTATTTCTGGCTGGAGGGAAAGGACCCCTTCCATGGGGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS-3UTR CAA 90 bp | TCAGAAATAAAACCAAGGATGGCTACTCTTGCCGTGTCCGTGGAGCACAATGTCTTCACAGAGAAAAGGTaGCTCCAGATACCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SEIKPRMATLAVSVEHNVFTEKR*LQIPSR Trigger: TCTGGAAGGTATCTGGAGCAACCTTTTCTCTGTGAA...GACATTGTGCTCCACGGACACGGCAAGAGTAGCCATCCTTGGTTTTATTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR CAA 90 bp | CAGGATTCTAGTCAGGGCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACTCATTCCAGAAGCTGTaGGCAGCTGCACAGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: QDSSQGNSVRTRNKTHSNSFQKL*AAAQSH Trigger: ATGTGACTGTGCAGCTGCCAACAGCTTCTGGAATGA...GTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGCCCTGACTAGAATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTTTATGATATCACTAACAACAAAACCACTCAACAAACTAGGGACAGAACACAAGTCTTCATCCAGTaGCAGAGCCTGCTTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PFYDITNNKTTQQTRDRTQVFIQ*QSLLQG Trigger: GCCCTGAAGCAGGCTCTGCAACTGGATGAAGACTTG...TGTTCTGTCCCTAGTTTGTTGAGTGGTTTTGTTGTTAGTGATATCATAAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTTTATGATATCACTAACAACAAAACCACTCAACAAACTAGGGACAGAACAGCTGTATTTCTCAGATaGCTGCAGCCCCTTAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PFYDITNNKTTQQTRDRTAVFLR*LQPLKG Trigger: CCCTTTAAGGGGCTGCAGCAATCTGAGAAATACAGC...TGTTCTGTCCCTAGTTTGTTGAGTGGTTTTGTTGTTAGTGATATCATAAAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS-3UTR CAA 90 bp | TCTAGTCAGGGCAATTCAGTCAGAACAAGAAATAAAACACATTCGAACCAGGAAGTGACTGTTTGGGTCTaGAATTTCATTCCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSQGNSVRTRNKTHSNQEVTVWV*NFIPEA Trigger: AGCTTCTGGAATGAAATTCAAGACCCAAACAGTCAC...TTCCTGGTTCGAATGTGTTTTATTTCTTGTTCTGACTGAATTGCCCTGACTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS TCA 72 bp | GTGCAGCACAACGGGTGCTTCCGGGCAGGTGGGGTCTaGGAAGAGGTAACATTCCTGGGGCTGGCTGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VQHNGCFRAGGV*EEVTFLGLAVV Trigger: GACCACAGCCAGCCCCAGGAATGTTACCTCTTCTCAGACCCCACCTGCCCGGAAGCACCCGTTGTGCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
||
| CDS GCA 72 bp | ATGCAGCTTGGACTCCAGCACCAGGCCCCACAGGTCTaGTACCGTGACGGTGTAGCCCTGCTCTTCCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MQLGLQHQAPQV*YRDGVALLFPK Trigger: CTTCGGGAAGAGCAGGGCTACACCGTCACGGTAGCAGACCTGTGGGGCCTGGTGCTGGAGTCCAAGCTGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 72 bp | GAGGCCATGGAGGAAGTTGGCGCTACGCTGGTGGAATaGCCTGCCAGTCAGAAAGCCCTTAAGTGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: EAMEEVGATLVE*PASQKALKCLG Trigger: GCCCAGGCACTTAAGGGCTTTCTGACTGGCAGGCCATTCCACCAGCGTAGCGCCAACTTCCTCCATGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 72 bp | AGTAGTCCCGGTGCAGCTGGAGGCCATGGAGGAAGTTaGCGCTACGCTGGTGGAATGGCCTGCCAGTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSPGAAGGHGGS*RYAGGMACQSE Trigger: TTCTGACTGGCAGGCCATTCCACCAGCGTAGCGCCAACTTCCTCCATGGCCTCCAGCTGCACCGGGACTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS TCA 72 bp | CCCCTCTCCAGTGCAGCTCTCTGTCCTGACAGCTTCTaGTCTGTCACCTGCCCATGCAGCTTGGACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLSSAALCPDSF*SVTCPCSLDSS Trigger: GCTGGAGTCCAAGCTGCATGGGCAGGTGACAGATCAGAAGCTGTCAGGACAGAGAGCTGCACTGGAGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS GCA 72 bp | CTGGTGGAATGGCCTGCCAGTCAGAAAGCCCTTAAGTaGCTGGGCCAGAGCTGTTCCAGACTCCAGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: LVEWPASQKALK*LGQSCSRLQPW Trigger: CCATGGCTGGAGTCTGGAACAGCTCTGGCCCAGGCACTTAAGGGCTTTCTGACTGGCAGGCCATTCCACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 72 bp | AGCTGGAGGCCATGGAGGAAGTTGGCGCTACGCTGGTaGAATGGCCTGCCAGTCAGAAAGCCCTTAAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SWRPWRKLALRW*NGLPVRKPLSA Trigger: GGCACTTAAGGGCTTTCTGACTGGCAGGCCATTCCACCAGCGTAGCGCCAACTTCCTCCATGGCCTCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 90 bp | TGTGTGTCCTCATATGACCCCTTCAGCATAAGCTCCAGCTCTAGTTaGTCCTGGCCTGCTGCCATGGCGGTGTTCCCGGCTCTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CVSSYDPFSISSSSS*SWPAAMAVFPALSR Trigger: CCTGGACAGAGCCGGGAACACCGCCATGGCAGCAGGCCAGGACAAACTAGAGCTGGAGCTTATGCTGAAGGGGTCATATGAGGACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS TCA 72 bp | GACCTGGGCGGAACAGGGAGGGACAGCTGCTGTTCATaGAGCAGCCAGCATCAATTAGGCAGAGCTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: DLGGTGRDSCCS*SSQHQLGRAEG Trigger: ACCCTCAGCTCTGCCTAATTGATGCTGGCTGCTTCATGAACAGCAGCTGTCCCTCCCTGTTCCGCCCAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS GCA 72 bp | AGAAGCTGTTGGCAGCTGCACAGTCACATAGGGATCTaGCTGACTCAACAGGTCAGCCCTGGGCAGACTCCG | + |
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Preference number: 6 (lower is better) Translates to: RSCWQLHSHIGI*LTQQVSPGQTP Trigger: CGGAGTCTGCCCAGGGCTGACCTGTTGAGTCAGGCAGATCCCTATGTGACTGTGCAGCTGCCAACAGCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 72 bp | TGCAGCTGGAGGCCATGGAGGAAGTTGGCGCTACGCTaGTGGAATGGCCTGCCAGTCAGAAAGCCCTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: CSWRPWRKLALR*WNGLPVRKPLS Trigger: ACTTAAGGGCTTTCTGACTGGCAGGCCATTCCACCAGCGTAGCGCCAACTTCCTCCATGGCCTCCAGCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 72 bp | CCTGCTCTTCCCGAAGCTTCAGTGTCTGGCGGTAGCTaGCCAAGTGTTCGGGGAGGAATTCCTTCAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PALPEASVSGGS*PSVRGGIPSAG Trigger: CCCTGCTGAAGGAATTCCTCCCCGAACACTTGGCAAGCTACCGCCAGACACTGAAGCTTCGGGAAGAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 72 bp | TCATATGACCCCTTCAGCATAAGCTCCAGCTCTAGTTaGTCCTGGCCTGCTGCCATGGCGGTGTTCCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: SYDPFSISSSSS*SWPAAMAVFPA Trigger: AGCCGGGAACACCGCCATGGCAGCAGGCCAGGACAAACTAGAGCTGGAGCTTATGCTGAAGGGGTCATATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS TCA 72 bp | GGTGTTCCCGGCTCTGTCCAGGGAGACATCCAGGTGTaGCAGTTCTCGGGCCACAAGAACATTGTTGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: GVPGSVQGDIQV*QFSGHKNIVGD Trigger: ATCACCAACAATGTTCTTGTGGCCCGAGAACTGTCACACCTGGATGTCTCCCTGGACAGAGCCGGGAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS TCA 72 bp | TCCTTCAGCAGGGTTTTAGCCACATGCTCCCTAGCATaGCTGATGGGTCCTTCGAGGTCCCTCTGTGACCAC | + |
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Preference number: 6 (lower is better) Translates to: SFSRVLATCSLA*LMGPSRSLCDH Trigger: GTGGTCACAGAGGGACCTCGAAGGACCCATCAGTCATGCTAGGGAGCATGTGGCTAAAACCCTGCTGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS GCA 72 bp | TCATCTTCGTTCAAGTCTTCATCCAGTTGCAGAGCCTaGTTCAGGGCGGCAGCCACCACCTTCTTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSFKSSSSCRA*FRAAATTFFLL Trigger: CAGGAGGAAGAAGGTGGTGGCTGCCGCCCTGAAGCAGGCTCTGCAACTGGATGAAGACTTGAACGAAGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 72 bp | GATTCGGGGTGTCATCTAGGTTGCAATCCGCCCAGGTaGAGAAGTGTCTCTGGTTACAGTAGTCCCGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: DSGCHLGCNPPR*RSVSGYSSPGA Trigger: TGCACCGGGACTACTGTAACCAGAGACACTTCTCCACCTGGGCGGATTGCAACCTAGATGACACCCCGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 72 bp | GGATTGGTTGTAATTGAAGGAGATTATGAGGTCCACTaGGCGACCTGGGCGGAACAGGGAGGGACAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GLVVIEGDYEVH*ATWAEQGGTAA Trigger: AGCAGCTGTCCCTCCCTGTTCCGCCCAGGTCGCCAAGTGGACCTCATAATCTCCTTCAATTACAACCAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 72 bp | GAAGGGCAGGCCCCGAGCTCTGCTGTATTTCTCAGATaGCTGCAGCCCCTTAAAGGGAAGGGATTGGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: EGQAPSSAVFLR*LQPLKGKGLVV Trigger: TACAACCAATCCCTTCCCTTTAAGGGGCTGCAGCAATCTGAGAAATACAGCAGAGCTCGGGGCCTGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 72 bp | GTAATTGAAGGAGATTATGAGGTCCACTTGGCGACCTaGGCGGAACAGGGAGGGACAGCTGCTGTTCATGAA | + |
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Preference number: 6 (lower is better) Translates to: VIEGDYEVHLAT*AEQGGTAAVHE Trigger: TTCATGAACAGCAGCTGTCCCTCCCTGTTCCGCCCAGGTCGCCAAGTGGACCTCATAATCTCCTTCAATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 90 bp | AGGGAGACATCCAGGTGTGACAGTTCTCGGGCCACAAGAACATTGTaGGTGATGAGGTTTTCTGGAGGGTCCCACGTTCTTTCCATTAGG | + |
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Preference number: 6 (lower is better) Translates to: RETSRCDSSRATRTL*VMRFSGGSHVLSIR Trigger: CCTAATGGAAAGAACGTGGGACCCTCCAGAAAACCTCATCACCAACAATGTTCTTGTGGCCCGAGAACTGTCACACCTGGATGTCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 90 bp | TCCAGGGAGACATCCAGGTGTGACAGTTCTCGGGCCACAAGAACATaGTTGGTGATGAGGTTTTCTGGAGGGTCCCACGTTCTTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: SRETSRCDSSRATRT*LVMRFSGGSHVLSI Trigger: AATGGAAAGAACGTGGGACCCTCCAGAAAACCTCATCACCAACAATGTTCTTGTGGCCCGAGAACTGTCACACCTGGATGTCTCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 90 bp | AAAGGGAAGGGATTGGTTGTAATTGAAGGAGATTATGAGGTCCACTaGGCGACCTGGGCGGAACAGGGAGGGACAGCTGCTGTTCATGAA | + |
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Preference number: 6 (lower is better) Translates to: KGKGLVVIEGDYEVH*ATWAEQGGTAAVHE Trigger: TTCATGAACAGCAGCTGTCCCTCCCTGTTCCGCCCAGGTCGCCAAGTGGACCTCATAATCTCCTTCAATTACAACCAATCCCTTCCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS GCA 72 bp | ACAGACAGCTCTTTGGGGCAACAGTCTGTCTTAAGCTaGAGCTTCCCTTCTGGAGCCTTCATAGCAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: TDSSLGQQSVLS*SFPSGAFIAGM Trigger: CATTCCTGCTATGAAGGCTCCAGAAGGGAAGCTGCAGCTTAAGACAGACTGTTGCCCCAAAGAGCTGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CCA 72 bp | GGGGCAACAGTCTGTCTTAAGCTGCAGCTTCCCTTCTaGAGCCTTCATAGCAGGAATGTCTATGGTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: GATVCLKLQLPF*SLHSRNVYGHL Trigger: GAGATGACCATAGACATTCCTGCTATGAAGGCTCCAGAAGGGAAGCTGCAGCTTAAGACAGACTGTTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 72 bp | TCCAGGTGTGACAGTTCTCGGGCCACAAGAACATTGTaGGTGATGAGGTTTTCTGGAGGGTCCCACGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SRCDSSRATRTL*VMRFSGGSHVL Trigger: AAGAACGTGGGACCCTCCAGAAAACCTCATCACCAACAATGTTCTTGTGGCCCGAGAACTGTCACACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 72 bp | ACATCCAGGTGTGACAGTTCTCGGGCCACAAGAACATaGTTGGTGATGAGGTTTTCTGGAGGGTCCCACGTT | + |
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Preference number: 6 (lower is better) Translates to: TSRCDSSRATRT*LVMRFSGGSHV Trigger: AACGTGGGACCCTCCAGAAAACCTCATCACCAACAATGTTCTTGTGGCCCGAGAACTGTCACACCTGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS TCA 72 bp | CCACATCTAACTCTTCTGGTCCCTGAGGATTCAGGCTaGAGGTTTTCTGGAGCAGCTGTCCAGGAAGGATTT | + |
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Preference number: 6 (lower is better) Translates to: PHLTLLVPEDSG*RFSGAAVQEGF Trigger: AAATCCTTCCTGGACAGCTGCTCCAGAAAACCTTCAGCCTGAATCCTCAGGGACCAGAAGAGTTAGATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 90 bp | ACTGAAGGTCTCGTTCCACACAGGATGACTGGAGTTAGTGACTGTTaGGGTCTTGAATTTCATTCCAGAAGCTGTTGGCAGCTGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: TEGLVPHRMTGVSDC*GLEFHSRSCWQLHS Trigger: ACTGTGCAGCTGCCAACAGCTTCTGGAATGAAATTCAAGACCCAAACAGTCACTAACTCCAGTCATCCTGTGTGGAACGAGACCTTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 72 bp | CTCGTTCCACACAGGATGACTGGAGTTAGTGACTGTTaGGGTCTTGAATTTCATTCCAGAAGCTGTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LVPHRMTGVSDC*GLEFHSRSCWQ Trigger: CTGCCAACAGCTTCTGGAATGAAATTCAAGACCCAAACAGTCACTAACTCCAGTCATCCTGTGTGGAACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS TCA 72 bp | TGGATGAGGAAACTGAAGGTCTCGTTCCACACAGGATaGCTGGAGTTAGTGACTGTTTGGGTCTTGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: WMRKLKVSFHTG*LELVTVWVLNF Trigger: GAAATTCAAGACCCAAACAGTCACTAACTCCAGTCATCCTGTGTGGAACGAGACCTTCAGTTTCCTCATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS GCA 72 bp | CATACCAGATATCCATCAGGTTCACAGAGAAAAGGTTaGTCCAGATACCTTCCAGAAAGCAAATCTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: HTRYPSGSQRKG*SRYLPESKSGT Trigger: AGTCCCAGATTTGCTTTCTGGAAGGTATCTGGAGCAACCTTTTCTCTGTGAACCTGATGGATATCTGGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 72 bp | TCATACCAGATATCCATCAGGTTCACAGAGAAAAGGTaGCTCCAGATACCTTCCAGAAAGCAAATCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SYQISIRFTEKR*LQIPSRKQIWD Trigger: GTCCCAGATTTGCTTTCTGGAAGGTATCTGGAGCAACCTTTTCTCTGTGAACCTGATGGATATCTGGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS CAA 72 bp | TTTCTCAGATTGCTGCAGCCCCTTAAAGGGAAGGGATaGGTTGTAATTGAAGGAGATTATGAGGTCCACTTG | + |
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Preference number: 6 (lower is better) Translates to: FLRLLQPLKGKG*VVIEGDYEVHL Trigger: CAAGTGGACCTCATAATCTCCTTCAATTACAACCAATCCCTTCCCTTTAAGGGGCTGCAGCAATCTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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| CDS TCA 72 bp | CATCCACAGGGAAATTGTTTGAGTCTTTCCCATAGGTaGTGTCATACCAGATATCCATCAGGTTCACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HPQGNCLSLSHR*CHTRYPSGSQR Trigger: TCTCTGTGAACCTGATGGATATCTGGTATGACATCACCTATGGGAAAGACTCAAACAATTTCCCTGTGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094665.5 |
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