RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLA2G4B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000098488

Ensembl transcript IDs: ENSMUST00000126150.2

Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGAGCCCCAAGTCCATCCATGGATGATGGCCATAGCACCTCTGCTTaGAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTA +
Preference number: 1 (lower is better)
Translates to: RAPSPSMDDGHSTSA*SFQPRLCDRAADML
Trigger: TAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTATGGCCATCATCCATGGATGGACTTGGGGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR CCA 90 bp GTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTaGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTG +
Preference number: 1 (lower is better)
Translates to: VSLVEVPDTPLWSCA*TSEFPESLEQLVML
Trigger: CAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR-3UTR TCA 90 bp CCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTTAAAGACCAAGAGTaGCCCAGGCAGGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: PLWSCAWTSEFPESLEQLVKDQE*PRQEPS
Trigger: GCTGGGCTCCTGCCTGGGTCACTCTTGGTCTTTAAC...CAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR CAA 90 bp GCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTaGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: AADMLVSLVEVPDTP*WSCAWTSEFPESLE
Trigger: CTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR GCA 72 bp AGTCCATCCATGGATGATGGCCATAGCACCTCTGCTTaGAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: SPSMDDGHSTSA*SFQPRLCDRAA
Trigger: AGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTATGGCCATCATCCATGGATGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR-3UTR CAA 90 bp GCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCATTGGTGATGCTGGTCTaGAACTCGGAGCAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: ACSFQPRLCDRAADMLVSLVMLV*NSEQKG
Trigger: CCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAA...TGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR CCA 72 bp GTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTaGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTG +
Preference number: 3 (lower is better)
Translates to: VEVPDTPLWSCA*TSEFPESLEQL
Trigger: CAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR GCA 72 bp ACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTaGCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: TCGSPRHTFVEL*LDIRVSRVSGA
Trigger: TGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR CCA 72 bp TTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTaGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCT +
Preference number: 3 (lower is better)
Translates to: LVSLVEVPDTPL*SCAWTSEFPES
Trigger: AGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp GCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTTGTCCAGGTTGGCCTaGTCCTGCGCCCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: APLLAASSLDSVTGLLTCLSRLA*SCAQRS
Trigger: GGACCGCTGGGCGCAGGATCAGGCCAACCTGGACAA...ACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp AGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGCGCCGCTGCACGGCCTaGTGCATGGCCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SFQPRLCDRAADMLVSLVRRCTA*CMASRS
Trigger: GCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCG...CACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp GTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAACGCTGCACGGCCTGGTaGATGGCCTCCCGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: VSRVSGAVGDAGLELGAERCTAW*MASRSR
Trigger: TCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCG...TTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp TCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCGCACGGCCTGGTGCATaGCCTCCCGCAGCCGATCCT +
Preference number: 4 (lower is better)
Translates to: SQTHLCGAVPGHQSFQSLARPGA*PPAADP
Trigger: AGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGC...GAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp TTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACACGCAGAGGCATCCTGTaGGCCCTCACAGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LVSLVEVPDTPLWSCAWTRRGIL*ALTGPS
Trigger: GCTGGGGCCTGTGAGGGCCCACAGGATGCCTCTGCG...TGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGCCTCGCGTGAAGTTGTaGGTGGCGTGGGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EVPDTPLWSCAWTSEFPEPRVKL*VAWARG
Trigger: TCCCCTCGCCCACGCCACCCACAACTTCACGCGAGG...CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp CAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAATGGAGGCCTCGCGTaGAGTTGTGGGTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: QTHLCGAVPGHQSFQSLWNGGLA*SCGWRG
Trigger: CCCACGCCACCCACAACTTCACGCGAGGCCTCCATT...CCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp CCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGAACAGATGGCACTCCTaGGGCTGCCGCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PLWSCAWTSEFPESLEQLNRWHS*GCRCSS
Trigger: CGAGGAGCAGCGGCAGCCTCAGGAGTGCCATCTGTT...CAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp GCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTGGATGGGAAAGGGATaGCCTGCTCCTGGCAGAACC +
Preference number: 4 (lower is better)
Translates to: APLLAASSLDSVTGLLTCWMGKG*PAPGRT
Trigger: GGTTCTGCCAGGAGCAGGGCATCCCTTTCCCATCCA...ACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp TCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCGTGAAGCAGGTTGGGTaGCCCAGGCGAGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: SQTHLCGAVPGHQSFQSLVKQVG*PRRARS
Trigger: TGAGCGTGCTCGCCTGGGCCACCCAACCTGCTTCAC...GAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGGTTGGTGAAGCAGGTTaGGTGGCCCAGGCGAGCACG +
Preference number: 4 (lower is better)
Translates to: EVPDTPLWSCAWTSEFPEVGEAG*VAQAST
Trigger: CGTGCTCGCCTGGGCCACCCAACCTGCTTCACCAAC...CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGGGGATGCCCTGCTCCTaGCAGAACCGGCTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: EFPESLEQLVMLVLNSEQGMPCS*QNRLRS
Trigger: GCTTCTGAGCCGGTTCTGCCAGGAGCAGGGCATCCC...CTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp GCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACCTGCCAGGTCCTTCTaGGACCACTCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ACSFQPRLCDRAADMLVSPARSF*DHSGSS
Trigger: TGAGGACCCAGAGTGGTCGCAGAAGGACCTGGCAGG...TGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp GAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGACATCCCGTGTTGGCTaGAGGAGGGGTGGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: EVPDTPLWSCAWTSEFPETSRVG*RRGGQL
Trigger: TAGCTGCCCACCCCTCCTGCAGCCAACACGGGATGT...CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp CAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGTCTGGAGCGTGTGGCTaGAAGCCGTGGGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QTHLCGAVPGHQSFQSLWSGACG*KPWAGS
Trigger: TGAACCTGCCCACGGCTTCCAGCCACACGCTCCAGA...CCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp CCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGCTCATCAGTGGCTCCTaGGACGTGGGGAAGACAAGT +
Preference number: 4 (lower is better)
Translates to: PESLEQLVMLVLNSEQKGLISGS*DVGKTS
Trigger: ACTTGTCTTCCCCACGTCCCAGGAGCCACTGATGAG...CCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCAGGATCCCACCACCAGTaGCCATCACGGCAATCACGG +
Preference number: 4 (lower is better)
Translates to: ACSFQPRLCDRAADMLVSGSHHQ*PSRQSR
Trigger: CCGTGATTGCCGTGATGGCCACTGGTGGTGGGATCC...TGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTGGCTGCAGGAGGGGTaGGCAGCTAGTATTGATGAG +
Preference number: 4 (lower is better)
Translates to: APLLAASSLDSVTGLLTCWLQEG*AASIDE
Trigger: CTCATCAATACTAGCTGCCCACCCCTCCTGCAGCCA...ACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp CAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGGAGAAGCTCTGGCGCTaGGTCCCAATTTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QTHLCGAVPGHQSFQSLWEKLWR*VPICRV
Trigger: GACCCTGCAAATTGGGACTCAGCGCCAGAGCTTCTC...CCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp AAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCCTCGGGGCTGGGTaGGATGGATGGGAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KSQTHLCGAVPGHQSFQSLLGAG*DGWERD
Trigger: ATCCCTTTCCCATCCATCTCACCCAGCCCCGAGGAG...ACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp TCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCAGTGGCACCTTCAGCTaGTCATGGGGGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SQTHLCGAVPGHQSFQSLSGTFS*SWGSSC
Trigger: GCAGGATGACCCCCATGAGCAGCTGAAGGTGCCACT...GAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp GCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTCACCTCAGTGGGCCCTaGCAGGTCCTTCTGCGACCA +
Preference number: 4 (lower is better)
Translates to: ADMLVSLVEVPDTPLWSCHLSGP*QVLLRP
Trigger: TGGTCGCAGAAGGACCTGGCAGGGCCCACTGAGGTG...ACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp TCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCCTTCCAGGAAGCAGATaGGGGACTCGGGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SQTHLCGAVPGHQSFQSLLPGSR*GTREAA
Trigger: AGCAGCTTCCCGAGTCCCGCATCTGCTTCCTGGAAG...GAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp CCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGTGGCCGCAAACAGATTaGTCCAGATGCCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PESLEQLVMLVLNSEQKGWPQTD*SRCLPG
Trigger: TCCTGGAAGGCATCTGGAGCAATCTGTTTGCGGCCA...CCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp CTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTATAGGCAGAGGGTTCTaGCCTCGACTCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LCLDIRVSRVSGAVGDAGIGRGF*PRLRAS
Trigger: AGAGGCCCTGAGTCGAGGCCAGAACCCTCTGCCTAT...ACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp CTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTTCAGTGGGTGTCAGCTaGTTGGGGAGCCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LCLDIRVSRVSGAVGDAGSVGVS*LGSLSS
Trigger: ACTGGACAGGCTCCCCAACCAGCTGACACCCACTGA...ACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp AAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTGCTGCTCCTCGGGGCTaGGTGAGATGGATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KSQTHLCGAVPGHQSFQSAAPRG*VRWMGK
Trigger: CTTTCCCATCCATCTCACCCAGCCCCGAGGAGCAGC...ACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR CAA 72 bp GCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTaGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: AWTSEFPESLEQ*VMLVLNSEQKG
Trigger: CCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp GTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGTTTCGGCTGTTCTTaGCTGTGCGTGTCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: VSRVSGAVGDAGLELGAEGFGCS*LCVSGA
Trigger: CGCTCCAGACACGCACAGTCAAGAACAGCCGAAACC...TTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp CCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGCTTGGAAGGAGTCATTaGCCAAAGGGAAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PESLEQLVMLVLNSEQKGLGRSH*PKGSAA
Trigger: TGCTGCACTTCCCTTTGGTCAATGACTCCTTCCAAG...CCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTGTGGCTGGAAGCCGTaGGCAGGTTCAGAGTCACAT +
Preference number: 4 (lower is better)
Translates to: EVPDTPLWSCAWTSEFPECGWKP*AGSESH
Trigger: ATGTGACTCTGAACCTGCCCACGGCTTCCAGCCACA...CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp AAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTGTGGCTCCTGGGACGTaGGGAAGACAAGTCTCACCA +
Preference number: 4 (lower is better)
Translates to: KSQTHLCGAVPGHQSFQSVAPGT*GRQVSP
Trigger: TGGTGAGACTTGTCTTCCCCACGTCCCAGGAGCCAC...ACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGCATACAAAGACGTCATaGCCCGGATCCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: EVPDTPLWSCAWTSEFPEHTKTS*PGSHHQ
Trigger: CTGGTGGTGGGATCCGGGCCATGACGTCTTTGTATG...CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp CCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGGTCCTCATAGAGGTTaGCCAGTGCCCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: PRLCDRAADMLVSLVEVPGPHRG*PVPRWI
Trigger: GATCCACCTGGGCACTGGCCAACCTCTATGAGGACC...TGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp CCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGCTTCTGCGACCACTCTaGGTCCTCATAGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PLWSCAWTSEFPESLEQLLLRPL*VLIEVG
Trigger: GCCAACCTCTATGAGGACCCAGAGTGGTCGCAGAAG...CAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAATCCAGGAGGCAGAGGTaGGGCTCAGTGGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LVMLVLNSEQKGKGVKDQSRRQR*GSVGVS
Trigger: GCTGACACCCACTGAGCCCCACCTCTGCCTCCTGGA...TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp CAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGCGGAAGTGGAAGTTCTaGTTCCAGACAGGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: QTHLCGAVPGHQSFQSLWRKWKF*FQTGFR
Trigger: CCGAAACCCTGTCTGGAATCAGAACTTCCACTTCCG...CCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp TCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCAAGCACCCTTTCTCCTaGGTACCCAAGGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SQTHLCGAVPGHQSFQSLKHPFS*VPKEKL
Trigger: GAGCTTCTCCTTGGGTACTCAGGAGAAAGGGTGCTT...GAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp AGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGAGAGCTCGGAGGAGATaGAGGCTCCATACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SFQPRLCDRAADMLVSLVRARRR*RLHTWG
Trigger: TCCCCAAGTATGGAGCCTTCATCTCCTCCGAGCTCT...CACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp GTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGAACTGGCTGGGTTCTaGGGACCAGTACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: VSRVSGAVGDAGLELGAEELAGF*GPVQAV
Trigger: GACAGCTTGTACTGGTCCTCAGAACCCAGCCAGTTC...TTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp CCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGACAAGTCTCACCAGCTaGGAGGAGGGTAGAGTTCGT +
Preference number: 4 (lower is better)
Translates to: PLWSCAWTSEFPESLEQLTSLTS*EEGRVR
Trigger: ACGAACTCTACCCTCCTCGCAGCTGGTGAGACTTGT...CAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCTTCCAGCCTCATCAGTaGCTCCTGGGACGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: DIRVSRVSGAVGDAGLELFQPHQ*LLGRGE
Trigger: TTCCCCACGTCCCAGGAGCCACTGATGAGGCTGGAA...GAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTTCTTCAGCACCTCAGTaGGCCCTGCCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ADMLVSLVEVPDTPLWSCSSAPQ*ALPGPS
Trigger: AGAAGGACCTGGCAGGGCCCACTGAGGTGCTGAAGA...ACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTTGGGTGTCAGCTGGTTaGGGAGCCTGTCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: ADMLVSLVEVPDTPLWSCWVSAG*GACPVW
Trigger: CCAAACTGGACAGGCTCCCCAACCAGCTGACACCCA...ACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp CCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCACCAGCAACCACAAGTTaGACTTTGCGCTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PRLCDRAADMLVSLVEVPPATTS*TLRSDL
Trigger: GAGGTCAGAGCGCAAAGTTCAACTTGTGGTTGCTGG...TGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp TCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCGAGGTTGTAGTCCAGTaGCAAGATGAGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: SQTHLCGAVPGHQSFQSLEVVVQ*QDEVHI
Trigger: GATGTGGACCTCATCTTGTCACTGGACTACAACCTC...GAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp TTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACACTCTTCAGTTCAACGTaGAAGCAGGAGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LVSLVEVPDTPLWSCAWTLFSST*KQESSR
Trigger: CCGGGAACTCTCCTGCTTGCACGTTGAACTGAAGAG...TGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp TTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGACAGATTGCTCCAGATaGCTTCCAGGAAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: LWSCAWTSEFPESLEQLVTDCSR*LPGSRC
Trigger: GCATCTGCTTCCTGGAAGGCATCTGGAGCAATCTGT...CACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp GCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTTTCAGATGGGGGACCTaGTCTTTGTCCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ADMLVSLVEVPDTPLWSCFRWGT*SLSRLA
Trigger: GGCCAACCTGGACAAAGAGCAGGTCCCCCATCTGAA...ACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp TTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACACATTGTCGGTGGCTCTaGTATCTTCAGATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LVSLVEVPDTPLWSCAWTHCRWL*YLQMGD
Trigger: GTCCCCCATCTGAAGATAGCAGAGCCACCGACAATG...TGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAATTCACCTCCCCAGCTaGCTTCTCCTCCGATGTCCG +
Preference number: 4 (lower is better)
Translates to: LVMLVLNSEQKGKGVKDQIHLPS*LLLRCP
Trigger: CGGACATCGGAGGAGAAGGCAGCTGGGGAGGTGAAT...TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAATCCTCGTGCAGGTCTTaGTCCAGCTGTAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VSRVSGAVGDAGLELGAESSCRS*SSCKAF
Trigger: AAAGGCCTTACAGCTGGACCAAGACCTGCACGAGGA...TTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp TCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCTGCTATCTTCAGATaGGGGACCTGCTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SACSFQPRLCDRAADMLVSAIFR*GTCSLS
Trigger: GGACAAAGAGCAGGTCCCCCATCTGAAGATAGCAGA...CACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp AAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTGCCAGCCATTGTCGGTaGCTCTGCTATCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: KSQTHLCGAVPGHQSFQSASHCR*LCYLQM
Trigger: CATCTGAAGATAGCAGAGCCACCGACAATGGCTGGC...ACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTTGCTCCCAGCAGGCTaGATAATGGAAGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: EVPDTPLWSCAWTSEFPELLPAG*IMEVER
Trigger: TCTTTCCACTTCCATTATCCAGCCTGCTGGGAGCAA...CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp GAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGGAAGCCGACTTCATATaGAGAGAACTCACACCACTC +
Preference number: 4 (lower is better)
Translates to: EFPESLEQLVMLVLNSEQEADFI*RELTPL
Trigger: GAGTGGTGTGAGTTCTCTCCATATGAAGTCGGCTTC...CTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGGTCCCAGAACTGGCTaGGTTCTGAGGACCAGTACA +
Preference number: 4 (lower is better)
Translates to: LVMLVLNSEQKGKGVKDQGPRTG*VLRTST
Trigger: TGTACTGGTCCTCAGAACCCAGCCAGTTCTGGGACC...TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR TCA 90 bp GACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCCTCAGGGCCTCTCGTTaGTCTGAGAGTTTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: DIRVSRVSGAVGDAGLELLRASR*SESLCS
Trigger: TGAACACAAACTCTCAGATCAACGAGAGGCCCTGAG...GAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp CAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCACAGCCAGCTCCTTTaGTCCTTCTTCCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QLVMLVLNSEQKGKGVKDHSQLL*SFFLLE
Trigger: CTCAAGAAGGAAGAAGGACCAAAGGAGCTGGCTGTG...GTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR CAA 72 bp TTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTaGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: FPESLEQLVMLV*NSEQKGKGVKD
Trigger: GTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
3UTR CAA 72 bp ATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTaGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: MLVSLVEVPDTP*WSCAWTSEFPE
Trigger: CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp CAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGTTTTGTGTAGTGGTATaGGGAGTCAGAAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: QTHLCGAVPGHQSFQSLWFCVVV*GVRRRQ
Trigger: CTGTCTTCTTCTGACTCCCCATACCACTACACAAAA...CCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR GCA 90 bp GCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTCCACAAGTTGAACTTTaGGCTCTGACCTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: ADMLVSLVEVPDTPLWSCPQVEL*ALTSLD
Trigger: ATCCAAAGAGGTCAGAGCGCAAAGTTCAACTTGTGG...ACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CCA 90 bp TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAATTCTTGAGCTGCCTATaGATCCGGAAGTGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LVMLVLNSEQKGKGVKDQFLSCL*IRKWKF
Trigger: GAACTTCCACTTCCGGATCCATAGGCAGCTCAAGAA...TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 90 bp GTGAAGCAGGTTGGGTGGCCCAGGCGAGCACGCTCAGCCAGCTCTTaGCGGTACCGCCAAAGTTGGCTAGGGGCCAACGCACCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: VKQVGWPRRARSASS*RYRQSWLGANAPSL
Trigger: CAAGCTGGGTGCGTTGGCCCCTAGCCAACTTTGGCGGTACCGGCAAGAGCTGGCTGAGCGTGCTCGCCTGGGCCACCCAACCTGCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 90 bp GCTGCCGCTGCTCCTCGGGGCTGGGTGAGATGGATGGGAAAGGGATaGCCTGCTCCTGGCAGAACCGGCTCAGAAGCTGCAGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: AAAAPRGWVRWMGKG*PAPGRTGSEAAAAE
Trigger: TTCAGCAGCTGCAGCTTCTGAGCCGGTTCTGCCAGGAGCAGGGCATCCCTTTCCCATCCATCTCACCCAGCCCCGAGGAGCAGCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CCCAGGCGAGCACGCTCAGCCAGCTCTTGCCGGTACCGCCAAAGTTaGCTAGGGGCCAACGCACCCAGCTTGCTCTTTGTCACCTGTGTC +
Preference number: 5 (lower is better)
Translates to: PRRARSASSCRYRQS*LGANAPSLLFVTCV
Trigger: GACACAGGTGACAAAGAGCAAGCTGGGTGCGTTGGCCCCTAGCCAACTTTGGCGGTACCGGCAAGAGCTGGCTGAGCGTGCTCGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CACAGAACAGATGGCACTCCTGAGGCTGCCGCTGCTCCTCGGGGCTaGGTGAGATGGATGGGAAAGGGATGCCCTGCTCCTGGCAGAACC +
Preference number: 5 (lower is better)
Translates to: HRTDGTPEAAAAPRG*VRWMGKGCPAPGRT
Trigger: GGTTCTGCCAGGAGCAGGGCATCCCTTTCCCATCCATCTCACCCAGCCCCGAGGAGCAGCGGCAGCCTCAGGAGTGCCATCTGTTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CAGCAAGGCCTCATTAATGAGGGCCCACAAGTTGGTGAAGCAGGTTaGGTGGCCCAGGCGAGCACGCTCAGCCAGCTCTTGCCGGTACCG +
Preference number: 5 (lower is better)
Translates to: QQGLINEGPQVGEAG*VAQASTLSQLLPVP
Trigger: CGGTACCGGCAAGAGCTGGCTGAGCGTGCTCGCCTGGGCCACCCAACCTGCTTCACCAACTTGTGGGCCCTCATTAATGAGGCCTTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CACTCCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTaGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTG +
Preference number: 5 (lower is better)
Translates to: HSGLNCLRFLRRCTA*CMASRSRSWLLQML
Trigger: CAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 90 bp CCACCACCAGTGGCCATCACGGCAATCACGGGGATCTCATCCTCGTaGAGGTCTTGGTCCAGCTGTAAGGCCTTTTTCAGCGCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PPPVAITAITGISSS*RSWSSCKAFFSAAA
Trigger: GGCTGCCGCGCTGAAAAAGGCCTTACAGCTGGACCAAGACCTGCACGAGGATGAGATCCCCGTGATTGCCGTGATGGCCACTGGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp AAGGCCTCATTAATGAGGGCCCACAAGTTGGTGAAGCAGGTTGGGTaGCCCAGGCGAGCACGCTCAGCCAGCTCTTGCCGGTACCGCCAA +
Preference number: 5 (lower is better)
Translates to: KASLMRAHKLVKQVG*PRRARSASSCRYRQ
Trigger: TTGGCGGTACCGGCAAGAGCTGGCTGAGCGTGCTCGCCTGGGCCACCCAACCTGCTTCACCAACTTGTGGGCCCTCATTAATGAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 90 bp CCACTCTGGGTCCTCATAGAGGTTGGCCAGTGCCCAGGTGGATCCTaGAGCCCCCGTGATATAGGAGATGCAGTCGAGAAGGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: PLWVLIEVGQCPGGS*SPRDIGDAVEKAEL
Trigger: GAGCTCGGCCTTCTCGACTGCATCTCCTATATCACGGGGGCTTCAGGATCCACCTGGGCACTGGCCAACCTCTATGAGGACCCAGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CAAGCCACTGGCCCGGAGGACGCGTACAGTGAGCAGGCATGTCTCTaGCACCTTTGCCTGCATGTAGACTGGGCAGGTTTGCAGAGCCAT +
Preference number: 5 (lower is better)
Translates to: QATGPEDAYSEQACL*HLCLHVDWAGLQSH
Trigger: ATGGCTCTGCAAACCTGCCCAGTCTACATGCAGGCAAAGGTGCCAGAGACATGCCTGCTCACTGTACGCGTCCTCCGGGCCAGTGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CCAGCTGCCCATACAAAGACGTCATGGCCCGGATCCCACCACCAGTaGCCATCACGGCAATCACGGGGATCTCATCCTCGTGCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: PAAHTKTSWPGSHHQ*PSRQSRGSHPRAGL
Trigger: AAGACCTGCACGAGGATGAGATCCCCGTGATTGCCGTGATGGCCACTGGTGGTGGGATCCGGGCCATGACGTCTTTGTATGGGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 90 bp CACAGCCCAGCCGCACAGCCAGCTCCTTTGGTCCTTCTTCCTTCTTaGGTTCCAGCCTCATCAGTGGCTCCTGGGACGTGGGGAAGACAA +
Preference number: 5 (lower is better)
Translates to: HSPAAQPAPLVLLPS*VPASSVAPGTWGRQ
Trigger: TTGTCTTCCCCACGTCCCAGGAGCCACTGATGAGGCTGGAACTCAAGAAGGAAGAAGGACCAAAGGAGCTGGCTGTGCGGCTGGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 90 bp GTCAGTGAAGAGCTCGGCGATCCTGCCAGCCATTGTCGGTGGCTCTaGTATCTTCAGATGGGGGACCTGCTCTTTGTCCAGGTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: VSEELGDPASHCRWL*YLQMGDLLFVQVGL
Trigger: CAGGCCAACCTGGACAAAGAGCAGGTCCCCCATCTGAAGATAGCAGAGCCACCGACAATGGCTGGCAGGATCGCCGAGCTCTTCACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CAACATCCAGGAGGCAGAGGTGGGGCTCAGTGGGTGTCAGCTGGTTaGGGAGCCTGTCCAGTTTGGAAGCTTTCCAGGCAGAGAAGTGAG +
Preference number: 5 (lower is better)
Translates to: QHPGGRGGAQWVSAG*GACPVWKLSRQRSE
Trigger: CTCACTTCTCTGCCTGGAAAGCTTCCAAACTGGACAGGCTCCCCAACCAGCTGACACCCACTGAGCCCCACCTCTGCCTCCTGGATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp GCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTACGCTCAGCCAGCTCTaGCCGGTACCGCCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: APLLAASSLDSVTGLLTCTLSQL*PVPPKL
Trigger: CAACTTTGGCGGTACCGGCAAGAGCTGGCTGAGCGT...ACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 90 bp TCCGGAAGTGGAAGTTCTGATTCCAGACAGGGTTTCGGCTGTTCTTaGCTGTGCGTGTCTGGAGCGTGTGGCTGGAAGCCGTGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SGSGSSDSRQGFGCS*LCVSGACGWKPWAG
Trigger: ACCTGCCCACGGCTTCCAGCCACACGCTCCAGACACGCACAGTCAAGAACAGCCGAAACCCTGTCTGGAATCAGAACTTCCACTTCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 90 bp CAGAAGCTGCAGCTGCTGAAAGGCTCCGTAGAGGTTGTAGTCCAGTaGCAAGATGAGGTCCACATCCCGTGTTGGCTGCAGGAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: QKLQLLKGSVEVVVQ*QDEVHIPCWLQEGW
Trigger: CCACCCCTCCTGCAGCCAACACGGGATGTGGACCTCATCTTGTCACTGGACTACAACCTCTACGGAGCCTTTCAGCAGCTGCAGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 90 bp GCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTaGAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTCCACATCTT +
Preference number: 5 (lower is better)
Translates to: AARPGAWPPAADPGC*RCCNASAVTACPHL
Trigger: AAGATGTGGACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CGGTCCCAGAACTGGCTGGGTTCTGAGGACCAGTACAAGCTGTCTTaGAGGCTGGCCGCAAACAGATTGCTCCAGATGCCTTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RSQNWLGSEDQYKLS*RLAANRLLQMPSRK
Trigger: CTTCCTGGAAGGCATCTGGAGCAATCTGTTTGCGGCCAGCCTCCAAGACAGCTTGTACTGGTCCTCAGAACCCAGCCAGTTCTGGGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CAGGAGGTCAGTGAAGAGCTCGGCGATCCTGCCAGCCATTGTCGGTaGCTCTGCTATCTTCAGATGGGGGACCTGCTCTTTGTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: QEVSEELGDPASHCR*LCYLQMGDLLFVQV
Trigger: AACCTGGACAAAGAGCAGGTCCCCCATCTGAAGATAGCAGAGCCACCGACAATGGCTGGCAGGATCGCCGAGCTCTTCACTGACCTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 90 bp GCAGAGGCATCCTGTGGGCCCTCACAGGCCCCAGCAACCACAAGTTaGACTTTGCGCTCTGACCTCTTTGGATCTCCTGTCCTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: AEASCGPSQAPATTS*TLRSDLFGSPVLFS
Trigger: ACTGAAGAGGACAGGAGATCCAAAGAGGTCAGAGCGCAAAGTTCAACTTGTGGTTGCTGGGGCCTGTGAGGGCCCACAGGATGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp CAGCTCCTTTGGTCCTTCTTCCTTCTTGAGTTCCAGCCTCATCAGTaGCTCCTGGGACGTGGGGAAGACAAGTCTCACCAGCTGCGAGGA +
Preference number: 5 (lower is better)
Translates to: QLLWSFFLLEFQPHQ*LLGRGEDKSHQLRG
Trigger: TCCTCGCAGCTGGTGAGACTTGTCTTCCCCACGTCCCAGGAGCCACTGATGAGGCTGGAACTCAAGAAGGAAGAAGGACCAAAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp CCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGGCCACCACGATGCCATaGCTGATGAGCTGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: PESLEQLVMLVLNSEQKGATTMP*LMSCSS
Trigger: TGAGGAACAGCTCATCAGCAATGGCATCGTGGTGGC...CCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp GCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCAGTGGGTGTCAGCTGGTaGGGGAGCCTGTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ACSFQPRLCDRAADMLVSVGVSW*GSLSSL
Trigger: CAAACTGGACAGGCTCCCCAACCAGCTGACACCCAC...TGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 90 bp TTGCGCTCTGACCTCTTTGGATCTCCTGTCCTCTTCAGTTCAACGTaGAAGCAGGAGAGTTCCCGGGCCACCACGATGCCATTGCTGATG +
Preference number: 5 (lower is better)
Translates to: LRSDLFGSPVLFSST*KQESSRATTMPLLM
Trigger: CATCAGCAATGGCATCGTGGTGGCCCGGGAACTCTCCTGCTTGCACGTTGAACTGAAGAGGACAGGAGATCCAAAGAGGTCAGAGCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp GGGGTCATCCTGCAGATGAACATTCAGCTCTTGCTCCCAGCAGGCTaGATAATGGAAGTGGAAAGATCCAGTGCCCGCAGAGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: GVILQMNIQLLLPAG*IMEVERSSARRGIL
Trigger: CAGGATGCCTCTGCGGGCACTGGATCTTTCCACTTCCATTATCCAGCCTGCTGGGAGCAAGAGCTGAATGTTCATCTGCAGGATGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp TTTGGTCCTTCTTCCTTCTTGAGTTCCAGCCTCATCAGTGGCTCCTaGGACGTGGGGAAGACAAGTCTCACCAGCTGCGAGGAGGGTAGA +
Preference number: 5 (lower is better)
Translates to: FGPSSFLSSSLISGS*DVGKTSLTSCEEGR
Trigger: TCTACCCTCCTCGCAGCTGGTGAGACTTGTCTTCCCCACGTCCCAGGAGCCACTGATGAGGCTGGAACTCAAGAAGGAAGAAGGACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp AGAACTGGCTGGGTTCTGAGGACCAGTACAAGCTGTCTTGGAGGCTaGCCGCAAACAGATTGCTCCAGATGCCTTCCAGGAAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: RTGWVLRTSTSCLGG*PQTDCSRCLPGSRC
Trigger: GCATCTGCTTCCTGGAAGGCATCTGGAGCAATCTGTTTGCGGCCAGCCTCCAAGACAGCTTGTACTGGTCCTCAGAACCCAGCCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 90 bp GGTGGGGCTCAGTGGGTGTCAGCTGGTTGGGGAGCCTGTCCAGTTTaGAAGCTTTCCAGGCAGAGAAGTGAGAGTTCTGGAAATAGTCCT +
Preference number: 5 (lower is better)
Translates to: GGAQWVSAGWGACPV*KLSRQRSESSGNSP
Trigger: AGGACTATTTCCAGAACTCTCACTTCTCTGCCTGGAAAGCTTCCAAACTGGACAGGCTCCCCAACCAGCTGACACCCACTGAGCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp GAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGGAGGTTACTAGGTCCTaGGAAGGCAAGCCACTGGCC +
Preference number: 5 (lower is better)
Translates to: EVPDTPLWSCAWTSEFPEEVTRS*EGKPLA
Trigger: GGCCAGTGGCTTGCCTTCCAAGGACCTAGTAACCTC...CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp TCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCGGGTTTCGGCTGTTCTaGACTGTGCGTGTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SQTHLCGAVPGHQSFQSLGFRLF*TVRVWS
Trigger: GCTCCAGACACGCACAGTCAAGAACAGCCGAAACCC...GAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp GAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGATGAGGGCCCACAAGTaGGTGAAGCAGGTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: EVPDTPLWSCAWTSEFPEMRAHK*VKQVGW
Trigger: CCACCCAACCTGCTTCACCAACTTGTGGGCCCTCAT...CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp TTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGCTGGCCGCAAACAGATaGCTCCAGATGCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LWSCAWTSEFPESLEQLVLAANR*LQMPSR
Trigger: CCTGGAAGGCATCTGGAGCAATCTGTTTGCGGCCAG...CACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp CTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCCAGTACAAGCTGTCTaGGAGGCTGGCCGCAAACAG +
Preference number: 5 (lower is better)
Translates to: LCLDIRVSRVSGAVGDAGPVQAV*EAGRKQ
Trigger: CTGTTTGCGGCCAGCCTCCAAGACAGCTTGTACTGG...ACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 90 bp TGGGCCCTCACAGGCCCCAGCAACCACAAGTTGAACTTTGCGCTCTaGCCTCTTTGGATCTCCTGTCCTCTTCAGTTCAACGTGCAAGCA +
Preference number: 5 (lower is better)
Translates to: WALTGPSNHKLNFAL*PLWISCPLQFNVQA
Trigger: TGCTTGCACGTTGAACTGAAGAGGACAGGAGATCCAAAGAGGTCAGAGCGCAAAGTTCAACTTGTGGTTGCTGGGGCCTGTGAGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp GCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTAGTTCCATAACATTCTaGAGCTGCCTATGGATCCGG +
Preference number: 5 (lower is better)
Translates to: APLLAASSLDSVTGLLTCSSITF*SCLWIR
Trigger: CCGGATCCATAGGCAGCTCAAGAATGTTATGGAACT...ACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp CAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACGCCAACGCACCCAGCTaGCTCTTTGTCACCTGTGTC +
Preference number: 5 (lower is better)
Translates to: QLVMLVLNSEQKGKGVKDANAPS*LFVTCV
Trigger: GACACAGGTGACAAAGAGCAAGCTGGGTGCGTTGGC...GTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp TTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGTCTTGGAAGGAGTCATaGACCAAAGGGAAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: LWSCAWTSEFPESLEQLVSWKES*TKGKCS
Trigger: GCTGCACTTCCCTTTGGTCAATGACTCCTTCCAAGA...CACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp GAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGATGAAGGCTCCATACTaGGGGAAGCCGACTTCATAT +
Preference number: 5 (lower is better)
Translates to: EVPDTPLWSCAWTSEFPEMKAPY*GKPTSY
Trigger: ATATGAAGTCGGCTTCCCCAAGTATGGAGCCTTCAT...CTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp AAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTGGCTGTAGGTCACTTTaGTGTAGTGGTATGGGGAGT +
Preference number: 5 (lower is better)
Translates to: KSQTHLCGAVPGHQSFQSGCRSL*CSGMGS
Trigger: ACTCCCCATACCACTACACAAAAGTGACCTACAGCC...ACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 90 bp TCCATAACATTCTTGAGCTGCCTATGGATCCGGAAGTGGAAGTTCTaGTTCCAGACAGGGTTTCGGCTGTTCTTGACTGTGCGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: SITFLSCLWIRKWKF*FQTGFRLFLTVRVW
Trigger: CCAGACACGCACAGTCAAGAACAGCCGAAACCCTGTCTGGAATCAGAACTTCCACTTCCGGATCCATAGGCAGCTCAAGAATGTTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS-3UTR CAA 90 bp GACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAACTCATGAACATTCAGCTCTaGCTCCCAGCAGGCTGGATA +
Preference number: 5 (lower is better)
Translates to: DIRVSRVSGAVGDAGLELMNIQL*LPAGWI
Trigger: TATCCAGCCTGCTGGGAGCAAGAGCTGAATGTTCAT...GAGTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTGATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 72 bp GGTTGGGTGGCCCAGGCGAGCACGCTCAGCCAGCTCTaGCCGGTACCGCCAAAGTTGGCTAGGGGCCAACGC +
Preference number: 6 (lower is better)
Translates to: GWVAQASTLSQL*PVPPKLARGQR
Trigger: GCGTTGGCCCCTAGCCAACTTTGGCGGTACCGGCAAGAGCTGGCTGAGCGTGCTCGCCTGGGCCACCCAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 90 bp GGTGAAGCAGGTTGGGTGGCCCAGGCGAGCACGCTCAGCCAGCTCTaGCCGGTACCGCCAAAGTTGGCTAGGGGCCAACGCACCCAGCTT +
Preference number: 6 (lower is better)
Translates to: GEAGWVAQASTLSQL*PVPPKLARGQRTQL
Trigger: AAGCTGGGTGCGTTGGCCCCTAGCCAACTTTGGCGGTACCGGCAAGAGCTGGCTGAGCGTGCTCGCCTGGGCCACCCAACCTGCTTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 72 bp ATCCTGCGCCCAGCGGTCCCAGAACTGGCTGGGTTCTaGGGACCAGTACAAGCTGTCTTGGAGGCTGGCCGC +
Preference number: 6 (lower is better)
Translates to: ILRPAVPELAGF*GPVQAVLEAGR
Trigger: GCGGCCAGCCTCCAAGACAGCTTGTACTGGTCCTCAGAACCCAGCCAGTTCTGGGACCGCTGGGCGCAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 72 bp GCTCCTCGGGGCTGGGTGAGATGGATGGGAAAGGGATaGCCTGCTCCTGGCAGAACCGGCTCAGAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: APRGWVRWMGKG*PAPGRTGSEAA
Trigger: TGCAGCTTCTGAGCCGGTTCTGCCAGGAGCAGGGCATCCCTTTCCCATCCATCTCACCCAGCCCCGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 72 bp AACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTaGATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: NCLRFLRRCTAW*MASRSRSWLLQ
Trigger: CTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp GTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATaGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGT +
Preference number: 6 (lower is better)
Translates to: VCAFSAAARPGA*PPAADPGCCRC
Trigger: ACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 90 bp GCCCAGGCGAGCACGCTCAGCCAGCTCTTGCCGGTACCGCCAAAGTaGGCTAGGGGCCAACGCACCCAGCTTGCTCTTTGTCACCTGTGT +
Preference number: 6 (lower is better)
Translates to: AQASTLSQLLPVPPK*ARGQRTQLALCHLC
Trigger: ACACAGGTGACAAAGAGCAAGCTGGGTGCGTTGGCCCCTAGCCAACTTTGGCGGTACCGGCAAGAGCTGGCTGAGCGTGCTCGCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 90 bp TGGGGCTTGTCGTGCAGCAAGGCCTCATTAATGAGGGCCCACAAGTaGGTGAAGCAGGTTGGGTGGCCCAGGCGAGCACGCTCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: WGLSCSKASLMRAHK*VKQVGWPRRARSAS
Trigger: GCTGGCTGAGCGTGCTCGCCTGGGCCACCCAACCTGCTTCACCAACTTGTGGGCCCTCATTAATGAGGCCTTGCTGCACGACAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 72 bp TTCAGATGGGGGACCTGCTCTTTGTCCAGGTTGGCCTaGTCCTGCGCCCAGCGGTCCCAGAACTGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: FRWGTCSLSRLA*SCAQRSQNWLG
Trigger: ACCCAGCCAGTTCTGGGACCGCTGGGCGCAGGATCAGGCCAACCTGGACAAAGAGCAGGTCCCCCATCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp GCACGCTCAGCCAGCTCTTGCCGGTACCGCCAAAGTTaGCTAGGGGCCAACGCACCCAGCTTGCTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: ARSASSCRYRQS*LGANAPSLLFV
Trigger: GACAAAGAGCAAGCTGGGTGCGTTGGCCCCTAGCCAACTTTGGCGGTACCGGCAAGAGCTGGCTGAGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp TTAATGAGGGCCCACAAGTTGGTGAAGCAGGTTGGGTaGCCCAGGCGAGCACGCTCAGCCAGCTCTTGCCGG +
Preference number: 6 (lower is better)
Translates to: LMRAHKLVKQVG*PRRARSASSCR
Trigger: CCGGCAAGAGCTGGCTGAGCGTGCTCGCCTGGGCCACCCAACCTGCTTCACCAACTTGTGGGCCCTCATTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp GGAGGCAGAGGTGGGGCTCAGTGGGTGTCAGCTGGTTaGGGAGCCTGTCCAGTTTGGAAGCTTTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: GGRGGAQWVSAG*GACPVWKLSRQ
Trigger: CTGCCTGGAAAGCTTCCAAACTGGACAGGCTCCCCAACCAGCTGACACCCACTGAGCCCCACCTCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp CTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTaGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: LNCLRFLRRCTA*CMASRSRSWLL
Trigger: CAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 90 bp TCTTGCCGGTACCGCCAAAGTTGGCTAGGGGCCAACGCACCCAGCTaGCTCTTTGTCACCTGTGTCTTCAGCACCTCAGTGGGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: SCRYRQSWLGANAPS*LFVTCVFSTSVGPA
Trigger: GGCAGGGCCCACTGAGGTGCTGAAGACACAGGTGACAAAGAGCAAGCTGGGTGCGTTGGCCCCTAGCCAACTTTGGCGGTACCGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 72 bp TGGAAGGCAAGCCACTGGCCCGGAGGACGCGTACAGTaGGCAGGCATGTCTCTGGCACCTTTGCCTGCATGT +
Preference number: 6 (lower is better)
Translates to: WKASHWPGGRVQ*AGMSLAPLPAC
Trigger: ACATGCAGGCAAAGGTGCCAGAGACATGCCTGCTCACTGTACGCGTCCTCCGGGCCAGTGGCTTGCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp GGCCCGGAGGACGCGTACAGTGAGCAGGCATGTCTCTaGCACCTTTGCCTGCATGTAGACTGGGCAGGTTTG +
Preference number: 6 (lower is better)
Translates to: GPEDAYSEQACL*HLCLHVDWAGL
Trigger: CAAACCTGCCCAGTCTACATGCAGGCAAAGGTGCCAGAGACATGCCTGCTCACTGTACGCGTCCTCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp TGGAAATGGAGGCCTCGCGTGAAGTTGTGGGTGGCGTaGGCGAGGGGACGCTTTGTCAGGAGGTCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: WKWRPRVKLWVA*ARGRFVRRSVK
Trigger: CTTCACTGACCTCCTGACAAAGCGTCCCCTCGCCCACGCCACCCACAACTTCACGCGAGGCCTCCATTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp TCCAGGAGGCAGAGGTGGGGCTCAGTGGGTGTCAGCTaGTTGGGGAGCCTGTCCAGTTTGGAAGCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: SRRQRWGSVGVS*LGSLSSLEAFQ
Trigger: CTGGAAAGCTTCCAAACTGGACAGGCTCCCCAACCAGCTGACACCCACTGAGCCCCACCTCTGCCTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 72 bp AGCACGCTCAGCCAGCTCTTGCCGGTACCGCCAAAGTaGGCTAGGGGCCAACGCACCCAGCTTGCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: STLSQLLPVPPK*ARGQRTQLALC
Trigger: ACAAAGAGCAAGCTGGGTGCGTTGGCCCCTAGCCAACTTTGGCGGTACCGGCAAGAGCTGGCTGAGCGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 72 bp TCGTGCAGCAAGGCCTCATTAATGAGGGCCCACAAGTaGGTGAAGCAGGTTGGGTGGCCCAGGCGAGCACGC +
Preference number: 6 (lower is better)
Translates to: SCSKASLMRAHK*VKQVGWPRRAR
Trigger: GCGTGCTCGCCTGGGCCACCCAACCTGCTTCACCAACTTGTGGGCCCTCATTAATGAGGCCTTGCTGCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 90 bp CCACAGCCCAGCCGCACAGCCAGCTCCTTTGGTCCTTCTTCCTTCTaGAGTTCCAGCCTCATCAGTGGCTCCTGGGACGTGGGGAAGACA +
Preference number: 6 (lower is better)
Translates to: PQPSRTASSFGPSSF*SSSLISGSWDVGKT
Trigger: TGTCTTCCCCACGTCCCAGGAGCCACTGATGAGGCTGGAACTCAAGAAGGAAGAAGGACCAAAGGAGCTGGCTGTGCGGCTGGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 72 bp CAAACAGATTGCTCCAGATGCCTTCCAGGAAGCAGATaGGGGACTCGGGAAGCTGCTTCACCAGCCGCCCCA +
Preference number: 6 (lower is better)
Translates to: QTDCSRCLPGSR*GTREAASPAAP
Trigger: TGGGGCGGCTGGTGAAGCAGCTTCCCGAGTCCCGCATCTGCTTCCTGGAAGGCATCTGGAGCAATCTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 72 bp GAGCTCGGCGATCCTGCCAGCCATTGTCGGTGGCTCTaGTATCTTCAGATGGGGGACCTGCTCTTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: ELGDPASHCRWL*YLQMGDLLFVQ
Trigger: CTGGACAAAGAGCAGGTCCCCCATCTGAAGATAGCAGAGCCACCGACAATGGCTGGCAGGATCGCCGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp CAGACAGGGTTTCGGCTGTTCTTGACTGTGCGTGTCTaGAGCGTGTGGCTGGAAGCCGTGGGCAGGTTCAGA +
Preference number: 6 (lower is better)
Translates to: QTGFRLFLTVRV*SVWLEAVGRFR
Trigger: TCTGAACCTGCCCACGGCTTCCAGCCACACGCTCCAGACACGCACAGTCAAGAACAGCCGAAACCCTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp CTCATTAATGAGGGCCCACAAGTTGGTGAAGCAGGTTaGGTGGCCCAGGCGAGCACGCTCAGCCAGCTCTTG +
Preference number: 6 (lower is better)
Translates to: LINEGPQVGEAG*VAQASTLSQLL
Trigger: CAAGAGCTGGCTGAGCGTGCTCGCCTGGGCCACCCAACCTGCTTCACCAACTTGTGGGCCCTCATTAATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 90 bp TCTGAGGACCAGTACAAGCTGTCTTGGAGGCTGGCCGCAAACAGATaGCTCCAGATGCCTTCCAGGAAGCAGATGCGGGACTCGGGAAGC +
Preference number: 6 (lower is better)
Translates to: SEDQYKLSWRLAANR*LQMPSRKQMRDSGS
Trigger: GCTTCCCGAGTCCCGCATCTGCTTCCTGGAAGGCATCTGGAGCAATCTGTTTGCGGCCAGCCTCCAAGACAGCTTGTACTGGTCCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp GAGTCACATAGCAGTCAGAGGAGGTTACTAGGTCCTTaGAAGGCAAGCCACTGGCCCGGAGGACGCGTACAG +
Preference number: 6 (lower is better)
Translates to: ESHSSQRRLLGP*KASHWPGGRVQ
Trigger: CTGTACGCGTCCTCCGGGCCAGTGGCTTGCCTTCCAAGGACCTAGTAACCTCCTCTGACTGCTATGTGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp CATACAAAGACGTCATGGCCCGGATCCCACCACCAGTaGCCATCACGGCAATCACGGGGATCTCATCCTCGT +
Preference number: 6 (lower is better)
Translates to: HTKTSWPGSHHQ*PSRQSRGSHPR
Trigger: ACGAGGATGAGATCCCCGTGATTGCCGTGATGGCCACTGGTGGTGGGATCCGGGCCATGACGTCTTTGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 72 bp GGAAGTTCTGATTCCAGACAGGGTTTCGGCTGTTCTTaGCTGTGCGTGTCTGGAGCGTGTGGCTGGAAGCCG +
Preference number: 6 (lower is better)
Translates to: GSSDSRQGFGCS*LCVSGACGWKP
Trigger: CGGCTTCCAGCCACACGCTCCAGACACGCACAGTCAAGAACAGCCGAAACCCTGTCTGGAATCAGAACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 72 bp TCCTGTGGGCCCTCACAGGCCCCAGCAACCACAAGTTaGACTTTGCGCTCTGACCTCTTTGGATCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: SCGPSQAPATTS*TLRSDLFGSPV
Trigger: GACAGGAGATCCAAAGAGGTCAGAGCGCAAAGTTCAACTTGTGGTTGCTGGGGCCTGTGAGGGCCCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 72 bp GTCCTCATAGAGGTTGGCCAGTGCCCAGGTGGATCCTaGAGCCCCCGTGATATAGGAGATGCAGTCGAGAAG +
Preference number: 6 (lower is better)
Translates to: VLIEVGQCPGGS*SPRDIGDAVEK
Trigger: CTTCTCGACTGCATCTCCTATATCACGGGGGCTTCAGGATCCACCTGGGCACTGGCCAACCTCTATGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 72 bp GAAAGGCTCCGTAGAGGTTGTAGTCCAGTGACAAGATaGGGTCCACATCCCGTGTTGGCTGCAGGAGGGGTG +
Preference number: 6 (lower is better)
Translates to: ERLRRGCSPVTR*GPHPVLAAGGV
Trigger: CACCCCTCCTGCAGCCAACACGGGATGTGGACCTCATCTTGTCACTGGACTACAACCTCTACGGAGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 72 bp GACCTCTTTGGATCTCCTGTCCTCTTCAGTTCAACGTaGAAGCAGGAGAGTTCCCGGGCCACCACGATGCCA +
Preference number: 6 (lower is better)
Translates to: DLFGSPVLFSST*KQESSRATTMP
Trigger: TGGCATCGTGGTGGCCCGGGAACTCTCCTGCTTGCACGTTGAACTGAAGAGGACAGGAGATCCAAAGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 72 bp CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTaGAGATGTTGTAATGCGTCAGCCGTAACAGCTTGT +
Preference number: 6 (lower is better)
Translates to: PGAWPPAADPGC*RCCNASAVTAC
Trigger: ACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp AGTGAAGAGCTCGGCGATCCTGCCAGCCATTGTCGGTaGCTCTGCTATCTTCAGATGGGGGACCTGCTCTTT +
Preference number: 6 (lower is better)
Translates to: SEELGDPASHCR*LCYLQMGDLLF
Trigger: AAAGAGCAGGTCCCCCATCTGAAGATAGCAGAGCCACCGACAATGGCTGGCAGGATCGCCGAGCTCTTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 72 bp TGCAAGCAGGAGAGTTCCCGGGCCACCACGATGCCATaGCTGATGAGCTGTTCCTCACAGTCTGTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: CKQESSRATTMP*LMSCSSQSVRV
Trigger: GACTCTGACAGACTGTGAGGAACAGCTCATCAGCAATGGCATCGTGGTGGCCCGGGAACTCTCCTGCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 72 bp TACCGCCAAAGTTGGCTAGGGGCCAACGCACCCAGCTaGCTCTTTGTCACCTGTGTCTTCAGCACCTCAGTG +
Preference number: 6 (lower is better)
Translates to: YRQSWLGANAPS*LFVTCVFSTSV
Trigger: CACTGAGGTGCTGAAGACACAGGTGACAAAGAGCAAGCTGGGTGCGTTGGCCCCTAGCCAACTTTGGCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 72 bp CAGTACAAGCTGTCTTGGAGGCTGGCCGCAAACAGATaGCTCCAGATGCCTTCCAGGAAGCAGATGCGGGAC +
Preference number: 6 (lower is better)
Translates to: QYKLSWRLAANR*LQMPSRKQMRD
Trigger: GTCCCGCATCTGCTTCCTGGAAGGCATCTGGAGCAATCTGTTTGCGGCCAGCCTCCAAGACAGCTTGTACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 90 bp AGTTCAACGTGCAAGCAGGAGAGTTCCCGGGCCACCACGATGCCATaGCTGATGAGCTGTTCCTCACAGTCTGTCAGAGTCTGTAGCCGA +
Preference number: 6 (lower is better)
Translates to: SSTCKQESSRATTMP*LMSCSSQSVRVCSR
Trigger: TCGGCTACAGACTCTGACAGACTGTGAGGAACAGCTCATCAGCAATGGCATCGTGGTGGCCCGGGAACTCTCCTGCTTGCACGTTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 72 bp CAGCTGCTGAAAGGCTCCGTAGAGGTTGTAGTCCAGTaGCAAGATGAGGTCCACATCCCGTGTTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: QLLKGSVEVVVQ*QDEVHIPCWLQ
Trigger: CTGCAGCCAACACGGGATGTGGACCTCATCTTGTCACTGGACTACAACCTCTACGGAGCCTTTCAGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 72 bp GGCCCTCACAGGCCCCAGCAACCACAAGTTGAACTTTaGGCTCTGACCTCTTTGGATCTCCTGTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: GPHRPQQPQVEL*ALTSLDLLSSS
Trigger: TGAAGAGGACAGGAGATCCAAAGAGGTCAGAGCGCAAAGTTCAACTTGTGGTTGCTGGGGCCTGTGAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS GCA 72 bp AGTACAAGCTGTCTTGGAGGCTGGCCGCAAACAGATTaGTCCAGATGCCTTCCAGGAAGCAGATGCGGGACT +
Preference number: 6 (lower is better)
Translates to: STSCLGGWPQTD*SRCLPGSRCGT
Trigger: AGTCCCGCATCTGCTTCCTGGAAGGCATCTGGAGCAATCTGTTTGCGGCCAGCCTCCAAGACAGCTTGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp TGGGTTCTGAGGACCAGTACAAGCTGTCTTGGAGGCTaGCCGCAAACAGATTGCTCCAGATGCCTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: WVLRTSTSCLGG*PQTDCSRCLPG
Trigger: TCCTGGAAGGCATCTGGAGCAATCTGTTTGCGGCCAGCCTCCAAGACAGCTTGTACTGGTCCTCAGAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp AACTGGCTGGGTTCTGAGGACCAGTACAAGCTGTCTTaGAGGCTGGCCGCAAACAGATTGCTCCAGATGCCT +
Preference number: 6 (lower is better)
Translates to: NWLGSEDQYKLS*RLAANRLLQMP
Trigger: AGGCATCTGGAGCAATCTGTTTGCGGCCAGCCTCCAAGACAGCTTGTACTGGTCCTCAGAACCCAGCCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CCA 72 bp CAGTGGGTGTCAGCTGGTTGGGGAGCCTGTCCAGTTTaGAAGCTTTCCAGGCAGAGAAGTGAGAGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: QWVSAGWGACPV*KLSRQRSESSG
Trigger: TCCAGAACTCTCACTTCTCTGCCTGGAAAGCTTCCAAACTGGACAGGCTCCCCAACCAGCTGACACCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 90 bp CTTCAGCTGCTCATGGGGGTCATCCTGCAGATGAACATTCAGCTCTaGCTCCCAGCAGGCTGGATAATGGAAGTGGAAAGATCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: LQLLMGVILQMNIQL*LPAGWIMEVERSSA
Trigger: GGCACTGGATCTTTCCACTTCCATTATCCAGCCTGCTGGGAGCAAGAGCTGAATGTTCATCTGCAGGATGACCCCCATGAGCAGCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 90 bp CACAGGCCCCAGCAACCACAAGTTGAACTTTGCGCTCTGACCTCTTaGGATCTCCTGTCCTCTTCAGTTCAACGTGCAAGCAGGAGAGTT +
Preference number: 6 (lower is better)
Translates to: HRPQQPQVELCALTS*DLLSSSVQRASRRV
Trigger: AACTCTCCTGCTTGCACGTTGAACTGAAGAGGACAGGAGATCCAAAGAGGTCAGAGCGCAAAGTTCAACTTGTGGTTGCTGGGGCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 72 bp CTCATGGGGGTCATCCTGCAGATGAACATTCAGCTCTaGCTCCCAGCAGGCTGGATAATGGAAGTGGAAAGA +
Preference number: 6 (lower is better)
Translates to: LMGVILQMNIQL*LPAGWIMEVER
Trigger: TCTTTCCACTTCCATTATCCAGCCTGCTGGGAGCAAGAGCTGAATGTTCATCTGCAGGATGACCCCCATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS TCA 72 bp TTCTTGAGCTGCCTATGGATCCGGAAGTGGAAGTTCTaGTTCCAGACAGGGTTTCGGCTGTTCTTGACTGTG +
Preference number: 6 (lower is better)
Translates to: FLSCLWIRKWKF*FQTGFRLFLTV
Trigger: CACAGTCAAGAACAGCCGAAACCCTGTCTGGAATCAGAACTTCCACTTCCGGATCCATAGGCAGCTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2
CDS CAA 72 bp CAGCAACCACAAGTTGAACTTTGCGCTCTGACCTCTTaGGATCTCCTGTCCTCTTCAGTTCAACGTGCAAGC +
Preference number: 6 (lower is better)
Translates to: QQPQVELCALTS*DLLSSSVQRAS
Trigger: GCTTGCACGTTGAACTGAAGAGGACAGGAGATCCAAAGAGGTCAGAGCGCAAAGTTCAACTTGTGGTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126150.2