Pregenerated sensors for PLA2G4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056220Ensembl transcript IDs: ENSMUST00000070200.15, ENSMUST00000111926.9, ENSMUST00000190507.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTaGACTCAAATTGTCATGGAATTCAAATGGCTTGATCATCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: SSQSLLHSKMTSNVF*TQIVMEFKWLDHPS Trigger: GCTGGGATGATCAAGCCATTTGAATTCCATGACAATTTGAGTTCAGAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| 3UTR-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCATGGAATTCAAATaGCTTGATCATCCCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: STTLSSSQSLLHSKMTSNVMEFK*LDHPST Trigger: TGTGCTGGGATGATCAAGCCATTTGAATTCCATGAC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGAACTCAAATTGTCATaGAATTCAAATGGCTTGATC | + |
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Preference number: 2 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFELKLS*NSNGLI Trigger: GATCAAGCCATTTGAATTCCATGACAATTTGAGTTC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| 3UTR-3UTR CAA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATTGGAATTCAAATGGCTaGATCATCCCAGCACAGAAA | + |
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Preference number: 3 (lower is better) Translates to: STTLSSSQSLLHSKMTSNWNSNG*IIPAQK Trigger: TTTCTGTGCTGGGATGATCAAGCCATTTGAATTCCA...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| 3UTR TCA 72 bp | TCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTaGACTCAAATTGTCATGGAATTCAAATGGCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: SLLHSKMTSNVF*TQIVMEFKWLD Trigger: ATCAAGCCATTTGAATTCCATGACAATTTGAGTTCAGAAGACATTAGAGGTCATCTTACTATGCAGAAGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCCGGAAACCCCCACCTaGACCCAAAATGGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFPETPT*TQNGHH Trigger: GTGGTGGCCATTTTGGGTTCAGGTGGGGGTTTCCGG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCAGAGAATCCCACCATaGCCCGGAAACCCCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFQRIPP*PGNPHL Trigger: CAGGTGGGGGTTTCCGGGCCATGGTGGGATTCTCTG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATCAGAGAATCCCACCATaGCCCGGAAACCCCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNQRIPP*PGNPHL Trigger: CAGGTGGGGGTTTCCGGGCCATGGTGGGATTCTCTG...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCACACAGTGCCATGCTaGACCGTAGGTCTGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFHTVPC*TVGLGM Trigger: CATGCCCAGACCTACGGTTCAGCATGGCACTGTGTG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGTGCCTTTGGGTCCTTaGGCCTCATCATCACTGTCG | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFVPLGP*ASSSLS Trigger: CGACAGTGATGATGAGGCTCAAGGACCCAAAGGCAC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTGCCTTTGGGTCCTTaGGCCTCATCATCACTGTCG | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNVPLGP*ASSSLS Trigger: CGACAGTGATGATGAGGCTCAAGGACCCAAAGGCAC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCACCTGAACCCAAAATaGCCACCACCGGCACATCAC | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFHLNPK*PPPAHH Trigger: GTGATGTGCCGGTGGTGGCCATTTTGGGTTCAGGTG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATCACCTGAACCCAAAATaGCCACCACCGGCACATCAC | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNHLNPK*PPPAHH Trigger: GTGATGTGCCGGTGGTGGCCATTTTGGGTTCAGGTG...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGACACCGGGCGGCATTaGCCTTTTCCTTCAAACTAC | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFDTGRH*PFPSNY Trigger: GTAGTTTGAAGGAAAAGGTCAATGCCGCCCGGTGTC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGACACCGGGCGGCATTaGCCTTTTCCTTCAAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNDTGRH*PFPSNY Trigger: GTAGTTTGAAGGAAAAGGTCAATGCCGCCCGGTGTC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCAGGAATCCTGAGAGCTaGAGTCTCTCAGGGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFRNPES*SLSGET Trigger: TGTCTCCCCTGAGAGACTTCAGCTCTCAGGATTCCT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATCGCCAAAGGTCCCCTTaGTTACTTTGGTGGCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNRQRSP*LLWWHV Trigger: TACGTGCCACCAAAGTAACCAAGGGGACCTTTGGCG...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCGCCAAAGGTCCCCTTaGTTACTTTGGTGGCACGTA | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFRQRSP*LLWWHV Trigger: TACGTGCCACCAAAGTAACCAAGGGGACCTTTGGCG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCCGGCACATCACGTGTaGAATAAAGCCCCTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFPAHHV*NKAPHS Trigger: AGAGTGAGGGGCTTTATTCCACACGTGATGTGCCGG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGGCAAACATCAGCTCTaGCACATCAGGTTTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFGKHQL*HIRFDV Trigger: CACGTCAAACCTGATGTGTCAGAGCTGATGTTTGCC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGATTCAAGCCCAGCATaGAGTTATGCACCTTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNDSSPA*SYAPFR Trigger: CCGGAAAGGTGCATAACTTCATGCTGGGCTTGAATC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTCATCGAAGGAATCCTaGGAGCTGAAGTCTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFSSKES*ELKSLR Trigger: CCTGAGAGACTTCAGCTCTCAGGATTCCTTCGATGA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATTCATCGAAGGAATCCTaGGAGCTGAAGTCTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNSSKES*ELKSLR Trigger: CCTGAGAGACTTCAGCTCTCAGGATTCCTTCGATGA...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATAGATCCACACCTCTCTaGGGTCGAAGAATCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNRSTPL*GRRIKG Trigger: TCCCTTGATTCTTCGACCTCAGAGAGGTGTGGATCT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR GCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCCCCGACTCATACAGTaGCTTCATCACACCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFPRLIQ*LHHTRE Trigger: TTCTCTGGTGTGATGAAGGCACTGTATGAGTCGGGG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCTCGGGACCTTTCTCTaGAAAATCGGGGTGAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFLGTFL*KIGVRV Trigger: TACTCTCACCCCGATTTTCCAGAGAAAGGTCCCGAG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCACATCAGGTTTGACGTaGAGACACGTGAAGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFTSGLT*RHVKRG Trigger: GCCTCTCTTCACGTGTCTCCACGTCAAACCTGATGT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATACATCAGGTTTGACGTaGAGACACGTGAAGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNTSGLT*RHVKRG Trigger: GCCTCTCTTCACGTGTCTCCACGTCAAACCTGATGT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATCATTCTCGGTGCCTTTaGGTCCTTGAGCCTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNHSRCL*VLEPHH Trigger: ATGATGAGGCTCAAGGACCCAAAGGCACCGAGAATG...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGCCATTAGCATCCGATaGACCCAACTTGCTTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFAISIR*TQLAWL Trigger: CAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGCCATTAGCATCCGATaGACCCAACTTGCTTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNAISIR*TQLAWL Trigger: CAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCTAGGGTTTCATCCATaGCGTAGTTGGCATCCATCA | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFLGFHP*RSWHPS Trigger: TGATGGATGCCAACTACGTCATGGATGAAACCCTAG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATCTGAAAGTTTTCTCCTaGTCACACAGTGCCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNLKVFS*SHSAML Trigger: CAGCATGGCACTGTGTGATCAGGAGAAAACTTTCAG...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCTGAAAGTTTTCTCCTaGTCACACAGTGCCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFLKVFS*SHSAML Trigger: CAGCATGGCACTGTGTGATCAGGAGAAAACTTTCAG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTGAGAGTACAAGGTTaGCATGTACCATGTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNVRVQG*HVPCGS Trigger: GGATCCACATGGTACATGTCAACCTTGTACTCTCAC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGTGAGAGTACAAGGTTaGCATGTACCATGTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFVRVQG*HVPCGS Trigger: GGATCCACATGGTACATGTCAACCTTGTACTCTCAC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTCTGGAAAATCGGGGTaGGAGTACAAGGTTGACATG | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFSGKSG*EYKVDM Trigger: CATGTCAACCTTGTACTCTCACCCCGATTTTCCAGA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGGGAGACAGTGGATATaGTGTGTTGAGATTCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFGRQWI*CVEIQA Trigger: GGCTTGAATCTCAACACATCATATCCACTGTCTCCC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGGGAGACAGTGGATATaGTGTGTTGAGATTCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNGRQWI*CVEIQA Trigger: GGCTTGAATCTCAACACATCATATCCACTGTCTCCC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR GCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGGTGTCACTCGGCCTTaGAGAAAAGTCAAAGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFGVTRP*RKVKGD Trigger: ATCTCCTTTGACTTTTCTGCAAGGCCGAGTGACACC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATCCTTGGTTACTTTGGTaGCACGTAGAACCACAACAG | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNPWLLW*HVEPQQ Trigger: CTGTTGTGGTTCTACGTGCCACCAAAGTAACCAAGG...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATTTCCACATAAGGATCTaGAGTGTCCAGCATATCGCC | + |
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Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNFHIRI*SVQHIA Trigger: GGCGATATGCTGGACACTCCAGATCCTTATGTGGAA...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTTCCACATAAGGATCTaGAGTGTCCAGCATATCGCC | + |
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Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFFHIRI*SVQHIA Trigger: GGCGATATGCTGGACACTCCAGATCCTTATGTGGAA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATCTCTCCCACTTTCATTaGAGATACAGGGAATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNLSHFH*RYRECS Trigger: GCTACATTCCCTGTATCTTCAATGAAAGTGGGAGAG...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCTTTCCTCTGCTGTCTaGAAGTTTTCTCCTGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFLSSAV*KFSPDH Trigger: GTGATCAGGAGAAAACTTTCAGACAGCAGAGGAAAG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATCTTTCCTCTGCTGTCTaGAAGTTTTCTCCTGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNLSSAV*KFSPDH Trigger: GTGATCAGGAGAAAACTTTCAGACAGCAGAGGAAAG...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCAGAGCCTTTATTCTGTaGGCCAGAAACTCCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFRAFIL*ARNSQN Trigger: GTTTTGGGAGTTTCTGGCTCACAGAATAAAGGCTCT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTTGCTTCAACATTACTaGGGGAAACAGAGCAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFLLQHY*GKQSNE Trigger: CTCGTTGCTCTGTTTCCCTCAGTAATGTTGAAGCAA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTTTCGCCCACTTCTCTaGAAGCAGAAGTTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFFRPLL*KQKFLE Trigger: TTCAAGGAACTTCTGCTTGCAGAGAAGTGGGCGAAA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATTTGGCCAGAACAAAGTaGATAATGGTTGGGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNLARTK*IMVGQS Trigger: GGATTGCCCAACCATTATCCACTTTGTTCTGGCCAA...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTTGGCCAGAACAAAGTaGATAATGGTTGGGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFLARTK*IMVGQS Trigger: GGATTGCCCAACCATTATCCACTTTGTTCTGGCCAA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATAGAGAGGGTTGTGGCTaGCATTTTTCATTAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNREGCG*HFSLAL Trigger: AAGAGCTAATGAAAAATGTCAGCCACAACCCTCTCT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCAGAGAGGGTTGTGGCTaGCATTTTTCATTAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFREGCG*HFSLAL Trigger: AAGAGCTAATGAAAAATGTCAGCCACAACCCTCTCT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTTGACATGTACCATGTaGATCCAGAAAGACCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFLTCTM*IQKDQQ Trigger: TTGCTGGTCTTTCTGGATCCACATGGTACATGTCAA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATAAGAATCAAGGGATATaGCAGGTTAAATGTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNKNQGI*QVKCEP Trigger: GGGCTCACATTTAACCTGCCATATCCCTTGATTCTT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCAAGAATCAAGGGATATaGCAGGTTAAATGTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFKNQGI*QVKCEP Trigger: GGGCTCACATTTAACCTGCCATATCCCTTGATTCTT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATAACAGAGCAACGAGATaGGTTCTGTCTTCTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNNRATR*VLSSVF Trigger: GAATACAGAAGACAGAACCCATCTCGTTGCTCTGTT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCAACAGAGCAACGAGATaGGTTCTGTCTTCTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFNRATR*VLSSVF Trigger: GAATACAGAAGACAGAACCCATCTCGTTGCTCTGTT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGGTTTATATCATTATTaGAGTGTCTCGTTCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFGLYHY*SVSFAS Trigger: GGAAGCGAACGAGACACTTCAATAATGATATAAACC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGGTTTATATCATTATTaGAGTGTCTCGTTCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNGLYHY*SVSFAS Trigger: GGAAGCGAACGAGACACTTCAATAATGATATAAACC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTGGGATACTGAAAGTTaGAGGTTGAAAATGGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFWDTES*RLKMAI Trigger: AATCGCCATTTTCAACCTTCAACTTTCAGTATCCCA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR GCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATATGTTCTCTTTCCTCTaGTGTCTGAAAGTTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNMFSFL*CLKVFS Trigger: GGAGAAAACTTTCAGACAGCAGAGGAAAGAGAACAT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCATGTTCTCTTTCCTCTaGTGTCTGAAAGTTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFMFSFL*CLKVFS Trigger: GGAGAAAACTTTCAGACAGCAGAGGAAAGAGAACAT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR GCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTGTATTCAATaGTCTCAACAATGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNVFCIQ*SQQWHP Trigger: AGGATGCCATTGTTGAGAGCATTGAATACAGAAGAC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGTCTTCTGTATTCAATaGTCTCAACAATGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFVFCIQ*SQQWHP Trigger: AGGATGCCATTGTTGAGAGCATTGAATACAGAAGAC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATAGTAAGAGAGGGTTGTaGCTGACATTTTTCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNSKRGL*LTFFIS Trigger: GCTAATGAAAAATGTCAGCCACAACCCTCTCTTACT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR TCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATCCACTATCTACCACATaGATCTTCTTACTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNPLSTT*IFLLLT Trigger: TGTCAAAAGTAAGAAGATTCATGTGGTAGATAGTGG...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR GCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATAAAGGTACCATATTTTaGCATGCCAATCTCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNKGTIF*HANLIW Trigger: CCATATGAGATTGGCATGGCAAAATATGGTACCTTT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGTGAAGCCTTTTGAATaGTTGATTGGGATACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFVKPFE*LIGILK Trigger: TTTCAGTATCCCAATCAAGCATTCAAAAGGCTTCAC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATATAAGGATCGATCTTTaGAAAGGGAAGCTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STTLSSSQSLLHSKMTSNIRIDL*KGKLVH Trigger: ATGAACAAGCTTCCCTTTCCAAAGATCGATCCTTAT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCATAAGGATCGATCTTTaGAAAGGGAAGCTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFIRIDL*KGKLVH Trigger: ATGAACAAGCTTCCCTTTCCAAAGATCGATCCTTAT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 90 bp | CTTCATCACACCAGAGAATCCCACCATGGCCCGGAAACCCCCACCTaGACCCAAAATGGCCACCACCGGCACATCACGTGTGGAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHHTRESHHGPETPT*TQNGHHRHITCGIK Trigger: CTTTATTCCACACGTGATGTGCCGGTGGTGGCCATTTTGGGTTCAGGTGGGGGTTTCCGGGCCATGGTGGGATTCTCTGGTGTGATGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | TCCACCCAATCGGCAAACATCAGCTCTGACACATCAGGTTTGACGTaGAGACACGTGAAGAGAGGCAAAGGACACCGGGCGGCATTGACC | + |
|
Preference number: 5 (lower is better) Translates to: STQSANISSDTSGLT*RHVKRGKGHRAALT Trigger: GGTCAATGCCGCCCGGTGTCCTTTGCCTCTCTTCACGTGTCTCCACGTCAAACCTGATGTGTCAGAGCTGATGTTTGCCGATTGGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS GCA 90 bp | ACCAGCAATGTATGTAGCACAGTCCAAAATCCCCGACTCATACAGTaGCTTCATCACACCAGAGAATCCCACCATGGCCCGGAAACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TSNVCSTVQNPRLIQ*LHHTRESHHGPETP Trigger: GGGGGTTTCCGGGCCATGGTGGGATTCTCTGGTGTGATGAAGGCACTGTATGAGTCGGGGATTTTGGACTGTGCTACATACATTGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS GCA 90 bp | ATCGATCTTTGGAAAGGGAAGCTTGTTCATTTTCGCCCACTTCTCTaGAAGCAGAAGTTCCTTGAAAGGGGGACTGGTGTCACTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IDLWKGKLVHFRPLL*KQKFLERGTGVTRP Trigger: AGGCCGAGTGACACCAGTCCCCCTTTCAAGGAACTTCTGCTTGCAGAGAAGTGGGCGAAAATGAACAAGCTTCCCTTTCCAAAGATCGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | GAGTCGCTCACCAAGGCCATTAGCATCCGATGGACCCAACTTGCTTaGTTGTCGCTTTGGTACTCTTTTTCAGCTTCTTCATTCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ESLTKAISIRWTQLA*LSLWYSFSASSFSV Trigger: CACCGAGAATGAAGAAGCTGAAAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGCCTTGGTGAGCGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 90 bp | TGGTACTCTTTTTCAGCTTCTTCATTCTCGGTGCCTTTGGGTCCTTaGGCCTCATCATCACTGTCGGAGCTGTCATTACTCACGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WYSFSASSFSVPLGP*ASSSLSELSLLTMC Trigger: GCACATCGTGAGTAATGACAGCTCCGACAGTGATGATGAGGCTCAAGGACCCAAAGGCACCGAGAATGAAGAAGCTGAAAAAGAGTACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | AAGGCCATTAGCATCCGATGGACCCAACTTGCTTGGTTGTCGCTTTaGTACTCTTTTTCAGCTTCTTCATTCTCGGTGCCTTTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KAISIRWTQLAWLSL*YSFSASSFSVPLGP Trigger: AGGACCCAAAGGCACCGAGAATGAAGAAGCTGAAAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 90 bp | GAAGGAATCCTGAGAGCTGAAGTCTCTCAGGGGAGACAGTGGATATaGTGTGTTGAGATTCAAGCCCAGCATGAAGTTATGCACCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGILRAEVSQGRQWI*CVEIQAQHEVMHLS Trigger: GGAAAGGTGCATAACTTCATGCTGGGCTTGAATCTCAACACATCATATCCACTGTCTCCCCTGAGAGACTTCAGCTCTCAGGATTCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS GCA 90 bp | GACAGTGGATATGATGTGTTGAGATTCAAGCCCAGCATGAAGTTATaGACCTTTCCGGCACGTCCTTCTCGGGTATTGAATAAAGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSGYDVLRFKPSMKL*TFPARPSRVLNKAE Trigger: CTCGGCTTTATTCAATACCCGAGAAGGACGTGCCGGAAAGGTGCATAACTTCATGCTGGGCTTGAATCTCAACACATCATATCCACTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS GCA 90 bp | CAGTGGTTCATATATTCGTTCAAATTCATCTGGATCTGCTACCGCTaGGTCGAGCTCGTCATCGAAGGAATCCTGAGAGCTGAAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QWFIYSFKFIWICYR*VELVIEGILRAEVS Trigger: AGAGACTTCAGCTCTCAGGATTCCTTCGATGACGAGCTCGACGCAGCGGTAGCAGATCCAGATGAATTTGAACGAATATATGAACCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | GTATTGAATAAAGCCGAGTCGCTCACCAAGGCCATTAGCATCCGATaGACCCAACTTGCTTGGTTGTCGCTTTGGTACTCTTTTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLNKAESLTKAISIR*TQLAWLSLWYSFSA Trigger: AGCTGAAAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGCCTTGGTGAGCGACTCGGCTTTATTCAATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGGTGCCTTTGGGTCCTaGAGCCTCATCATCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFGAFGS*SLIITV Trigger: GACAGTGATGATGAGGCTCAAGGACCCAAAGGCACC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGGTGCCTTTGGGTCCTaGAGCCTCATCATCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: STTLSSSQSLLHSKMTSNGAFGS*SLIITV Trigger: GACAGTGATGATGAGGCTCAAGGACCCAAAGGCACC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 90 bp | AGCTCTTCATTAATCTCCTCGGGACCTTTCTCTGGAAAATCGGGGTaGGAGTACAAGGTTGACATGTACCATGTGGATCCAGAAAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSLISSGPFSGKSG*EYKVDMYHVDPERP Trigger: TGGTCTTTCTGGATCCACATGGTACATGTCAACCTTGTACTCTCACCCCGATTTTCCAGAGAAAGGTCCCGAGGAGATTAATGAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 90 bp | GGCCTTGCAGAAAAGTCAAAGGAGATGATAAGATCCACACCTCTCTaGGGTCGAAGAATCAAGGGATATGGCAGGTTAAATGTGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLAEKSKEMIRSTPL*GRRIKGYGRLNVSP Trigger: TGGGCTCACATTTAACCTGCCATATCCCTTGATTCTTCGACCTCAGAGAGGTGTGGATCTTATCATCTCCTTTGACTTTTCTGCAAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS GCA 90 bp | TTTGACATCCAGTGGTTCATATATTCGTTCAAATTCATCTGGATCTaGTACCGCTGCGTCGAGCTCGTCATCGAAGGAATCCTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FDIQWFIYSFKFIWI*YRCVELVIEGILRA Trigger: AGCTCTCAGGATTCCTTCGATGACGAGCTCGACGCAGCGGTAGCAGATCCAGATGAATTTGAACGAATATATGAACCACTGGATGTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | CCTGGGGCCTTGTACTTTCTGAAGTTGATGTTGGCCAGAACAAAGTaGATAATGGTTGGGCAATCCTTCTCCACATCAGGATTCTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGALYFLKLMLARTK*IMVGQSFSTSGFLG Trigger: ACCTAAGAATCCTGATGTGGAGAAGGATTGCCCAACCATTATCCACTTTGTTCTGGCCAACATCAACTTCAGAAAGTACAAGGCCCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGTCCCCTTGGTTACTTaGGTGGCACGTAGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFVPLVT*VARRTT Trigger: TGTGGTTCTACGTGCCACCAAAGTAACCAAGGGGAC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCCGTCCTTCTCGGGTATaGAATAAAGCCGAGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFRPSRV*NKAESL Trigger: GAGCGACTCGGCTTTATTCAATACCCGAGAAGGACG...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | CTTACTTTTGACATCCAGTGGTTCATATATTCGTTCAAATTCATCTaGATCTGCTACCGCTGCGTCGAGCTCGTCATCGAAGGAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTFDIQWFIYSFKFI*ICYRCVELVIEGIL Trigger: CAGGATTCCTTCGATGACGAGCTCGACGCAGCGGTAGCAGATCCAGATGAATTTGAACGAATATATGAACCACTGGATGTCAAAAGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATTGGTGTCACTCGGCCTaGCAGAAAAGTCAAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: STTLSSSQSLLHSKMTSNWCHSA*QKSQRR Trigger: TCTCCTTTGACTTTTCTGCAAGGCCGAGTGACACCA...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 90 bp | TTCTCTTTTATGTTCTCTTTCCTCTGCTGTCTGAAAGTTTTCTCCTaGTCACACAGTGCCATGCTGAACCGTAGGTCTGGGCATGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: FSFMFSFLCCLKVFS*SHSAMLNRRSGHEQ Trigger: TTGTTCATGCCCAGACCTACGGTTCAGCATGGCACTGTGTGATCAGGAGAAAACTTTCAGACAGCAGAGGAAAGAGAACATAAAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 ENSMUST00000190507.2 |
||
| CDS-3UTR CAA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGGTGAGAGTACAAGGTaGACATGTACCATGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: STTLSSSQSLLHSKMTSNGESTR*TCTMWI Trigger: GATCCACATGGTACATGTCAACCTTGTACTCTCACC...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGGTGAGAGTACAAGGTaGACATGTACCATGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFGESTR*TCTMWI Trigger: GATCCACATGGTACATGTCAACCTTGTACTCTCACC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCAGAACACCTGGGGCCTaGTACTTTCTGAAGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFRTPGA*YFLKLM Trigger: CATCAACTTCAGAAAGTACAAGGCCCCAGGTGTTCT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | GATGATAAGATCCACACCTCTCTGAGGTCGAAGAATCAAGGGATATaGCAGGTTAAATGTGAGCCCACTATCTACCACATGAATCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DDKIHTSLRSKNQGI*QVKCEPTIYHMNLL Trigger: AAGAAGATTCATGTGGTAGATAGTGGGCTCACATTTAACCTGCCATATCCCTTGATTCTTCGACCTCAGAGAGGTGTGGATCTTATCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATACCCAACTTGCTTGGTaGTCGCTTTGGTACTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: STTLSSSQSLLHSKMTSNTQLAW*SLWYSF Trigger: AAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCAGTGGATATGATGTGTaGAGATTCAAGCCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFSGYDV*RFKPSM Trigger: CATGCTGGGCTTGAATCTCAACACATCATATCCACT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTTTGGAAAGGGAAGCTaGTTCATTTTCGCCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFFGKGS*FIFAHF Trigger: GAAGTGGGCGAAAATGAACAAGCTTCCCTTTCCAAA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATTTTGGAAAGGGAAGCTaGTTCATTTTCGCCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: STTLSSSQSLLHSKMTSNFGKGS*FIFAHF Trigger: GAAGTGGGCGAAAATGAACAAGCTTCCCTTTCCAAA...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | GAGCCCACTATCTACCACATGAATCTTCTTACTTTTGACATCCAGTaGTTCATATATTCGTTCAAATTCATCTGGATCTGCTACCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EPTIYHMNLLTFDIQ*FIYSFKFIWICYRC Trigger: GCAGCGGTAGCAGATCCAGATGAATTTGAACGAATATATGAACCACTGGATGTCAAAAGTAAGAAGATTCATGTGGTAGATAGTGGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | GAATTTTCTTGCTTCAACATTACTGAGGGAAACAGAGCAACGAGATaGGTTCTGTCTTCTGTATTCAATGCTCTCAACAATGGCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EFSCFNITEGNRATR*VLSSVFNALNNGIL Trigger: AAGGATGCCATTGTTGAGAGCATTGAATACAGAAGACAGAACCCATCTCGTTGCTCTGTTTCCCTCAGTAATGTTGAAGCAAGAAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCGGGTTTATATCATTATaGAAGTGTCTCGTTCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFGFISL*KCLVRF Trigger: GAAGCGAACGAGACACTTCAATAATGATATAAACCC...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCAGAAGTAAGAGAGGGTaGTGGCTGACATTTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFRSKRG*WLTFFI Trigger: AATGAAAAATGTCAGCCACAACCCTCTCTTACTTCT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCTTTCTGAAGTTGATGTaGGCCAGAACAAAGTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFFLKLM*ARTKWI Trigger: TATCCACTTTGTTCTGGCCAACATCAACTTCAGAAA...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATTTGTACTTTCTGAAGTaGATGTTGGCCAGAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: STTLSSSQSLLHSKMTSNLYFLK*MLARTK Trigger: CTTTGTTCTGGCCAACATCAACTTCAGAAAGTACAA...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 90 bp | ACGTATCTTTTAACTTTCTGTGGTGTAAGAAGTAAGAGAGGGTTGTaGCTGACATTTTTCATTAGCTCTTCATTAATCTCCTCGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: TYLLTFCGVRSKRGL*LTFFISSSLISSGP Trigger: AGGTCCCGAGGAGATTAATGAAGAGCTAATGAAAAATGTCAGCCACAACCCTCTCTTACTTCTTACACCACAGAAAGTTAAAAGATACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCATTTCTTTCTCTTCTTaGGTTTCCCTTAGAACACCT | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFISFSS*VSLRTP Trigger: AGGTGTTCTAAGGGAAACCAAAGAAGAGAAAGAAAT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | TCCACAACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATAAGCCTTTTGAATGCTaGATTGGGATACTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: STTLSSSQSLLHSKMTSNKPFEC*IGILKV Trigger: AACTTTCAGTATCCCAATCAAGCATTCAAAAGGCTT...ATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGTTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGAGTAGCAGCCAGTCTCTTCTGCATAGTAAGATGACCTCTAATGTCTTCAAGCCTTTTGAATGCTaGATTGGGATACTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSQSLLHSKMTSNVFKPFEC*IGILKV Trigger: AACTTTCAGTATCCCAATCAAGCATTCAAAAGGCTT...GAAGACATTAGAGGTCATCTTACTATGCAGAAGAGACTGGCTGCTACTCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 90 bp | ATCAAGGGATATGGCAGGTTAAATGTGAGCCCACTATCTACCACATaGATCTTCTTACTTTTGACATCCAGTGGTTCATATATTCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IKGYGRLNVSPLSTT*IFLLLTSSGSYIRS Trigger: TGAACGAATATATGAACCACTGGATGTCAAAAGTAAGAAGATTCATGTGGTAGATAGTGGGCTCACATTTAACCTGCCATATCCCTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 72 bp | ACCAGAGAATCCCACCATGGCCCGGAAACCCCCACCTaGACCCAAAATGGCCACCACCGGCACATCACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TRESHHGPETPT*TQNGHHRHITC Trigger: ACACGTGATGTGCCGGTGGTGGCCATTTTGGGTTCAGGTGGGGGTTTCCGGGCCATGGTGGGATTCTCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CCA 72 bp | CCACCATGGCCCGGAAACCCCCACCTGAACCCAAAATaGCCACCACCGGCACATCACGTGTGGAATAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPWPGNPHLNPK*PPPAHHVWNKA Trigger: GGCTTTATTCCACACGTGATGTGCCGGTGGTGGCCATTTTGGGTTCAGGTGGGGGTTTCCGGGCCATGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 72 bp | CATACAGTGCCTTCATCACACCAGAGAATCCCACCATaGCCCGGAAACCCCCACCTGAACCCAAAATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HTVPSSHQRIPP*PGNPHLNPKWP Trigger: TGGCCATTTTGGGTTCAGGTGGGGGTTTCCGGGCCATGGTGGGATTCTCTGGTGTGATGAAGGCACTGTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CCA 72 bp | TCGGCAAACATCAGCTCTGACACATCAGGTTTGACGTaGAGACACGTGAAGAGAGGCAAAGGACACCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SANISSDTSGLT*RHVKRGKGHRA Trigger: CGCCCGGTGTCCTTTGCCTCTCTTCACGTGTCTCCACGTCAAACCTGATGTGTCAGAGCTGATGTTTGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CAA 90 bp | CTAAATTCCACCCAATCGGCAAACATCAGCTCTGACACATCAGGTTaGACGTGGAGACACGTGAAGAGAGGCAAAGGACACCGGGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LNSTQSANISSDTSG*TWRHVKRGKGHRAA Trigger: TGCCGCCCGGTGTCCTTTGCCTCTCTTCACGTGTCTCCACGTCAAACCTGATGTGTCAGAGCTGATGTTTGCCGATTGGGTGGAATTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 90 bp | CCCAGCATGAAGTTATGCACCTTTCCGGCACGTCCTTCTCGGGTATaGAATAAAGCCGAGTCGCTCACCAAGGCCATTAGCATCCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: PSMKLCTFPARPSRV*NKAESLTKAISIRW Trigger: CCATCGGATGCTAATGGCCTTGGTGAGCGACTCGGCTTTATTCAATACCCGAGAAGGACGTGCCGGAAAGGTGCATAACTTCATGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 72 bp | CTGCGTCGAGCTCGTCATCGAAGGAATCCTGAGAGCTaGAGTCTCTCAGGGGAGACAGTGGATATGATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRRARHRRNPES*SLSGETVDMMC Trigger: ACACATCATATCCACTGTCTCCCCTGAGAGACTTCAGCTCTCAGGATTCCTTCGATGACGAGCTCGACGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS GCA 72 bp | GTATGTAGCACAGTCCAAAATCCCCGACTCATACAGTaGCTTCATCACACCAGAGAATCCCACCATGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VCSTVQNPRLIQ*LHHTRESHHGP Trigger: CGGGCCATGGTGGGATTCTCTGGTGTGATGAAGGCACTGTATGAGTCGGGGATTTTGGACTGTGCTACATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 72 bp | AAAGCCGAGTCGCTCACCAAGGCCATTAGCATCCGATaGACCCAACTTGCTTGGTTGTCGCTTTGGTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: KAESLTKAISIR*TQLAWLSLWYS Trigger: AGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGCCTTGGTGAGCGACTCGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 72 bp | AGTTATGCACCTTTCCGGCACGTCCTTCTCGGGTATTaGATAAAGCCGAGTCGCTCACCAAGGCCATTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SYAPFRHVLLGY*IKPSRSPRPLA Trigger: TGCTAATGGCCTTGGTGAGCGACTCGGCTTTATTCAATACCCGAGAAGGACGTGCCGGAAAGGTGCATAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 72 bp | TCATTTTCGCCCACTTCTCTGCAAGCAGAAGTTCCTTaGAAGGGGGACTGGTGTCACTCGGCCTTGCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SFSPTSLQAEVP*KGDWCHSALQK Trigger: TTTCTGCAAGGCCGAGTGACACCAGTCCCCCTTTCAAGGAACTTCTGCTTGCAGAGAAGTGGGCGAAAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CAA 72 bp | ACCCAATCGGCAAACATCAGCTCTGACACATCAGGTTaGACGTGGAGACACGTGAAGAGAGGCAAAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: TQSANISSDTSG*TWRHVKRGKGH Trigger: GTGTCCTTTGCCTCTCTTCACGTGTCTCCACGTCAAACCTGATGTGTCAGAGCTGATGTTTGCCGATTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CAA 72 bp | AAGTTATGCACCTTTCCGGCACGTCCTTCTCGGGTATaGAATAAAGCCGAGTCGCTCACCAAGGCCATTAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLCTFPARPSRV*NKAESLTKAIS Trigger: GCTAATGGCCTTGGTGAGCGACTCGGCTTTATTCAATACCCGAGAAGGACGTGCCGGAAAGGTGCATAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CAA 90 bp | GGATCTGGAGTGTCCAGCATATCGCCAAAGGTCCCCTTGGTTACTTaGGTGGCACGTAGAACCACAACAGTAAACTTATGGGAGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGVSSISPKVPLVT*VARRTTTVNLWEYW Trigger: CCAGTACTCCCATAAGTTTACTGTTGTGGTTCTACGTGCCACCAAAGTAACCAAGGGGACCTTTGGCGATATGCTGGACACTCCAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CAA 90 bp | TCGCTCACCAAGGCCATTAGCATCCGATGGACCCAACTTGCTTGGTaGTCGCTTTGGTACTCTTTTTCAGCTTCTTCATTCTCGGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLTKAISIRWTQLAW*SLWYSFSASSFSVP Trigger: AGGCACCGAGAATGAAGAAGCTGAAAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGCCTTGGTGAGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS GCA 72 bp | TGGAAAGGGAAGCTTGTTCATTTTCGCCCACTTCTCTaGAAGCAGAAGTTCCTTGAAAGGGGGACTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: WKGKLVHFRPLL*KQKFLERGTGV Trigger: GACACCAGTCCCCCTTTCAAGGAACTTCTGCTTGCAGAGAAGTGGGCGAAAATGAACAAGCTTCCCTTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CAA 72 bp | CGCTCACCAAGGCCATTAGCATCCGATGGACCCAACTaGCTTGGTTGTCGCTTTGGTACTCTTTTTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSPRPLASDGPN*LGCRFGTLFQL Trigger: AAGCTGAAAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGCCTTGGTGAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CAA 90 bp | AAGCCGAGTCGCTCACCAAGGCCATTAGCATCCGATGGACCCAACTaGCTTGGTTGTCGCTTTGGTACTCTTTTTCAGCTTCTTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: KPSRSPRPLASDGPN*LGCRFGTLFQLLHS Trigger: AGAATGAAGAAGCTGAAAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGCCTTGGTGAGCGACTCGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS TCA 72 bp | ATGTTCTCTTTCCTCTGCTGTCTGAAAGTTTTCTCCTaGTCACACAGTGCCATGCTGAACCGTAGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MFSFLCCLKVFS*SHSAMLNRRSG Trigger: CCCAGACCTACGGTTCAGCATGGCACTGTGTGATCAGGAGAAAACTTTCAGACAGCAGAGGAAAGAGAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 ENSMUST00000190507.2 |
||
| CDS TCA 72 bp | TGGACTAAATTCCACCCAATCGGCAAACATCAGCTCTaGCACATCAGGTTTGACGTGGAGACACGTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WTKFHPIGKHQL*HIRFDVETREE Trigger: CTCTTCACGTGTCTCCACGTCAAACCTGATGTGTCAGAGCTGATGTTTGCCGATTGGGTGGAATTTAGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CCA 72 bp | AGCATCCGATGGACCCAACTTGCTTGGTTGTCGCTTTaGTACTCTTTTTCAGCTTCTTCATTCTCGGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SIRWTQLAWLSL*YSFSASSFSVP Trigger: AGGCACCGAGAATGAAGAAGCTGAAAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
||
| CDS CAA 72 bp | GTGTCCAGCATATCGCCAAAGGTCCCCTTGGTTACTTaGGTGGCACGTAGAACCACAACAGTAAACTTATGG | + |
|
Preference number: 6 (lower is better) Translates to: VSSISPKVPLVT*VARRTTTVNLW Trigger: CCATAAGTTTACTGTTGTGGTTCTACGTGCCACCAAAGTAACCAAGGGGACCTTTGGCGATATGCTGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 90 bp | TTGGTACTCTTTTTCAGCTTCTTCATTCTCGGTGCCTTTGGGTCCTaGAGCCTCATCATCACTGTCGGAGCTGTCATTACTCACGATGTG | + |
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Preference number: 6 (lower is better) Translates to: LVLFFSFFILGAFGS*SLIITVGAVITHDV Trigger: CACATCGTGAGTAATGACAGCTCCGACAGTGATGATGAGGCTCAAGGACCCAAAGGCACCGAGAATGAAGAAGCTGAAAAAGAGTACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 90 bp | GTTTCCCTTAGAACACCTGGGGCCTTGTACTTTCTGAAGTTGATGTaGGCCAGAACAAAGTGGATAATGGTTGGGCAATCCTTCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: VSLRTPGALYFLKLM*ARTKWIMVGQSFST Trigger: TGTGGAGAAGGATTGCCCAACCATTATCCACTTTGTTCTGGCCAACATCAACTTCAGAAAGTACAAGGCCCCAGGTGTTCTAAGGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS TCA 72 bp | TTAATCTCCTCGGGACCTTTCTCTGGAAAATCGGGGTaGGAGTACAAGGTTGACATGTACCATGTGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: LISSGPFSGKSG*EYKVDMYHVDP Trigger: TGGATCCACATGGTACATGTCAACCTTGTACTCTCACCCCGATTTTCCAGAGAAAGGTCCCGAGGAGATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS TCA 72 bp | CTGAGAGCTGAAGTCTCTCAGGGGAGACAGTGGATATaGTGTGTTGAGATTCAAGCCCAGCATGAAGTTATG | + |
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Preference number: 6 (lower is better) Translates to: LRAEVSQGRQWI*CVEIQAQHEVM Trigger: CATAACTTCATGCTGGGCTTGAATCTCAACACATCATATCCACTGTCTCCCCTGAGAGACTTCAGCTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS GCA 72 bp | ATATATTCGTTCAAATTCATCTGGATCTGCTACCGCTaGGTCGAGCTCGTCATCGAAGGAATCCTGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: IYSFKFIWICYR*VELVIEGILRA Trigger: AGCTCTCAGGATTCCTTCGATGACGAGCTCGACGCAGCGGTAGCAGATCCAGATGAATTTGAACGAATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS GCA 72 bp | CAGTGGTTCATATATTCGTTCAAATTCATCTGGATCTaGTACCGCTGCGTCGAGCTCGTCATCGAAGGAATC | + |
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Preference number: 6 (lower is better) Translates to: QWFIYSFKFIWI*YRCVELVIEGI Trigger: GATTCCTTCGATGACGAGCTCGACGCAGCGGTAGCAGATCCAGATGAATTTGAACGAATATATGAACCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CCA 72 bp | ACCAAGGCCATTAGCATCCGATGGACCCAACTTGCTTaGTTGTCGCTTTGGTACTCTTTTTCAGCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TKAISIRWTQLA*LSLWYSFSASS Trigger: TGAAGAAGCTGAAAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGCCTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CCA 72 bp | GACATCCAGTGGTTCATATATTCGTTCAAATTCATCTaGATCTGCTACCGCTGCGTCGAGCTCGTCATCGAA | + |
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Preference number: 6 (lower is better) Translates to: DIQWFIYSFKFI*ICYRCVELVIE Trigger: TTCGATGACGAGCTCGACGCAGCGGTAGCAGATCCAGATGAATTTGAACGAATATATGAACCACTGGATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CCA 72 bp | ATCCACACCTCTCTGAGGTCGAAGAATCAAGGGATATaGCAGGTTAAATGTGAGCCCACTATCTACCACATG | + |
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Preference number: 6 (lower is better) Translates to: IHTSLRSKNQGI*QVKCEPTIYHM Trigger: CATGTGGTAGATAGTGGGCTCACATTTAACCTGCCATATCCCTTGATTCTTCGACCTCAGAGAGGTGTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 72 bp | TTTTTCAGCTTCTTCATTCTCGGTGCCTTTGGGTCCTaGAGCCTCATCATCACTGTCGGAGCTGTCATTACT | + |
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Preference number: 6 (lower is better) Translates to: FFSFFILGAFGS*SLIITVGAVIT Trigger: AGTAATGACAGCTCCGACAGTGATGATGAGGCTCAAGGACCCAAAGGCACCGAGAATGAAGAAGCTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 72 bp | AGAACACCTGGGGCCTTGTACTTTCTGAAGTTGATGTaGGCCAGAACAAAGTGGATAATGGTTGGGCAATCC | + |
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Preference number: 6 (lower is better) Translates to: RTPGALYFLKLM*ARTKWIMVGQS Trigger: GGATTGCCCAACCATTATCCACTTTGTTCTGGCCAACATCAACTTCAGAAAGTACAAGGCCCCAGGTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS GCA 72 bp | TATGATGTGTTGAGATTCAAGCCCAGCATGAAGTTATaGACCTTTCCGGCACGTCCTTCTCGGGTATTGAAT | + |
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Preference number: 6 (lower is better) Translates to: YDVLRFKPSMKL*TFPARPSRVLN Trigger: ATTCAATACCCGAGAAGGACGTGCCGGAAAGGTGCATAACTTCATGCTGGGCTTGAATCTCAACACATCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 72 bp | AAGGCCATTAGCATCCGATGGACCCAACTTGCTTGGTaGTCGCTTTGGTACTCTTTTTCAGCTTCTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: KAISIRWTQLAW*SLWYSFSASSF Trigger: GAATGAAGAAGCTGAAAAAGAGTACCAAAGCGACAACCAAGCAAGTTGGGTCCATCGGATGCTAATGGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 72 bp | CTGAAGTCTCTCAGGGGAGACAGTGGATATGATGTGTaGAGATTCAAGCCCAGCATGAAGTTATGCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: LKSLRGDSGYDV*RFKPSMKLCTF Trigger: AAAGGTGCATAACTTCATGCTGGGCTTGAATCTCAACACATCATATCCACTGTCTCCCCTGAGAGACTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 72 bp | TTCTCTTCTTTGGTTTCCCTTAGAACACCTGGGGCCTaGTACTTTCTGAAGTTGATGTTGGCCAGAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: FSSLVSLRTPGA*YFLKLMLARTK Trigger: CTTTGTTCTGGCCAACATCAACTTCAGAAAGTACAAGGCCCCAGGTGTTCTAAGGGAAACCAAAGAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 90 bp | AGCATTCCTTTAATCCTTCCCGATCAAACACATAAGGATCGATCTTaGGAAAGGGAAGCTTGTTCATTTTCGCCCACTTCTCTGCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SIPLILPDQTHKDRS*EREACSFSPTSLQA Trigger: TGCTTGCAGAGAAGTGGGCGAAAATGAACAAGCTTCCCTTTCCAAAGATCGATCCTTATGTGTTTGATCGGGAAGGATTAAAGGAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CCA 72 bp | TTGTACTTTCTGAAGTTGATGTTGGCCAGAACAAAGTaGATAATGGTTGGGCAATCCTTCTCCACATCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LYFLKLMLARTK*IMVGQSFSTSG Trigger: TCCTGATGTGGAGAAGGATTGCCCAACCATTATCCACTTTGTTCTGGCCAACATCAACTTCAGAAAGTACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS TCA 72 bp | GAAAAGTCAAAGGAGATGATAAGATCCACACCTCTCTaGGGTCGAAGAATCAAGGGATATGGCAGGTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: EKSKEMIRSTPL*GRRIKGYGRLN Trigger: ATTTAACCTGCCATATCCCTTGATTCTTCGACCTCAGAGAGGTGTGGATCTTATCATCTCCTTTGACTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CAA 90 bp | TCAACGTATCTTTTAACTTTCTGTGGTGTAAGAAGTAAGAGAGGGTaGTGGCTGACATTTTTCATTAGCTCTTCATTAATCTCCTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: STYLLTFCGVRSKRG*WLTFFISSSLISSG Trigger: TCCCGAGGAGATTAATGAAGAGCTAATGAAAAATGTCAGCCACAACCCTCTCTTACTTCTTACACCACAGAAAGTTAAAAGATACGTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS TCA 72 bp | TCCTTCAAACTACTCAGGGTCATGCTCATCCTATTTTaGATTAGTGTTTCTCCTATTAGCATCCCAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: SFKLLRVMLILF*ISVSPISIPKM Trigger: CATCTTTGGGATGCTAATAGGAGAAACACTAATTCAAAATAGGATGAGCATGACCCTGAGTAGTTTGAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS TCA 72 bp | TATGGCAGGTTAAATGTGAGCCCACTATCTACCACATaGATCTTCTTACTTTTGACATCCAGTGGTTCATAT | + |
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Preference number: 6 (lower is better) Translates to: YGRLNVSPLSTT*IFLLLTSSGSY Trigger: ATATGAACCACTGGATGTCAAAAGTAAGAAGATTCATGTGGTAGATAGTGGGCTCACATTTAACCTGCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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| CDS CCA 72 bp | ATCTACCACATGAATCTTCTTACTTTTGACATCCAGTaGTTCATATATTCGTTCAAATTCATCTGGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: IYHMNLLTFDIQ*FIYSFKFIWIC Trigger: GCAGATCCAGATGAATTTGAACGAATATATGAACCACTGGATGTCAAAAGTAAGAAGATTCATGTGGTAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070200.15 ENSMUST00000111926.9 |
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