RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLA2G2F (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028749

Ensembl transcript IDs: ENSMUST00000030526.7

Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAACTCAGCAGGAACTCTCTGGGCGCCCATCCCAACGCCACCCCTaGCTTGATGGGAGCAGTGAGGCAGGGAAGACCAGGGAGGCTTGT +
Preference number: 1 (lower is better)
Translates to: KTQQELSGRPSQRHP*LDGSSEAGKTREAC
Trigger: ACAAGCCTCCCTGGTCTTCCCTGCCTCACTGCTCCCATCAAGCCAGGGGTGGCGTTGGGATGGGCGCCCAGAGAGTTCCTGCTGAGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CCA 90 bp ACTACAGGACTGGGACGGAGCCACAGGACAGTTCTGCACCCTATCTaGCCCCACACATCAGATGTAGACCCCAGCGGGACATCCCACCGT +
Preference number: 1 (lower is better)
Translates to: TTGLGRSHRTVLHPI*PHTSDVDPSGTSHR
Trigger: ACGGTGGGATGTCCCGCTGGGGTCTACATCTGATGTGTGGGGCCAGATAGGGTGCAGAACTGTCCTGTGGCTCCGTCCCAGTCCTGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CCA 90 bp CTGCCAGCAGGAGCCCTCACCTCTGCCCAAGATTCCCCAGAGCTGTaGGGCCCAGTACCCTCAGTAACACTAGCCCTTTACCATCCCTTC +
Preference number: 1 (lower is better)
Translates to: LPAGALTSAQDSPEL*GPVPSVTLALYHPF
Trigger: GAAGGGATGGTAAAGGGCTAGTGTTACTGAGGGTACTGGGCCCCACAGCTCTGGGGAATCTTGGGCAGAGGTGAGGGCTCCTGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CCA 90 bp ACTAGGCTCTCCCTGCATAGAGAGAGAGTAAGCTCCCAGCAGCCCTaGCCTGCTGCTCTGAATGTGGGTGGGACAATGAATGGCACGGGG +
Preference number: 1 (lower is better)
Translates to: TRLSLHRERVSSQQP*PAALNVGGTMNGTG
Trigger: CCCCGTGCCATTCATTGTCCCACCCACATTCAGAGCAGCAGGCCAGGGCTGCTGGGAGCTTACTCTCTCTCTATGCAGGGAGAGCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR TCA 90 bp TTGATGGGAGCAGTGAGGCAGGGAAGACCAGGGAGGCTTGTTGGCTaGGCCTCTGAGAGGGTAAATGAGGAAGATCACAAGGCTGGGGCA +
Preference number: 1 (lower is better)
Translates to: LMGAVRQGRPGRLVG*ASERVNEEDHKAGA
Trigger: TGCCCCAGCCTTGTGATCTTCCTCATTTACCCTCTCAGAGGCTCAGCCAACAAGCCTCCCTGGTCTTCCCTGCCTCACTGCTCCCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CCA 90 bp CCAGCCTACTCTATAGGAATATACCCATGCAGGAGCCCACACGTCTaGTGTCAAAACTCAGCAGGAACTCTCTGGGCGCCCATCCCAACG +
Preference number: 1 (lower is better)
Translates to: PAYSIGIYPCRSPHV*CQNSAGTLWAPIPT
Trigger: CGTTGGGATGGGCGCCCAGAGAGTTCCTGCTGAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR GCA 90 bp CAGCATGAGGCAAGCTTCAGAGAGTGGCCCCTCTCACACATGTGCTaGCATTATAGACACCGCTATCTACATAAACACCCTTCCCTGCCT +
Preference number: 1 (lower is better)
Translates to: QHEASFREWPLSHMC*HYRHRYLHKHPSLP
Trigger: AGGCAGGGAAGGGTGTTTATGTAGATAGCGGTGTCTATAATGGCAGCACATGTGTGAGAGGGGCCACTCTCTGAAGCTTGCCTCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR TCA 90 bp TTCCACATTTCAACCCAGACCTTAGTGTCTTCCCCAGTGACAGTCTaGACTAGGCTCTCCCTGCATAGAGAGAGAGTAAGCTCCCAGCAG +
Preference number: 1 (lower is better)
Translates to: FHISTQTLVSSPVTV*TRLSLHRERVSSQQ
Trigger: CTGCTGGGAGCTTACTCTCTCTCTATGCAGGGAGAGCCTAGTTCAGACTGTCACTGGGGAAGACACTAAGGTCTGGGTTGAAATGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR GCA 90 bp TGTGCTGCCATTATAGACACCGCTATCTACATAAACACCCTTCCCTaGCTCTATACCACCCTGCTTGGCTCTCTGTCTCCAGTGACAGTG +
Preference number: 1 (lower is better)
Translates to: CAAIIDTAIYINTLP*LYTTLLGSLSPVTV
Trigger: CACTGTCACTGGAGACAGAGAGCCAAGCAGGGTGGTATAGAGGCAGGGAAGGGTGTTTATGTAGATAGCGGTGTCTATAATGGCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR CCA 90 bp TCTCTGGGCGCCCATCCCAACGCCACCCCTGGCTTGATGGGAGCAGTGAGGCAGCTGTTGACCCTGAGATaGAAGGAGAGGCAGGGGACA +
Preference number: 2 (lower is better)
Translates to: SLGAHPNATPGLMGAVRQLLTLR*KERQGT
Trigger: TGTCCCCTGCCTCTCCTTCCATCTCAGGGTCAACAG...CTGCCTCACTGCTCCCATCAAGCCAGGGGTGGCGTTGGGATGGGCGCCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR CCA 90 bp TCTCTGGGCGCCCATCCCAACGCCACCCCTGGCTTGATGGGAGCAGTGAGGCAGTGCTCTGAATGTGGGTaGGACAATGAATGGCACGGG +
Preference number: 2 (lower is better)
Translates to: SLGAHPNATPGLMGAVRQCSECG*DNEWHG
Trigger: CCCGTGCCATTCATTGTCCCACCCACATTCAGAGCA...CTGCCTCACTGCTCCCATCAAGCCAGGGGTGGCGTTGGGATGGGCGCCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR TCA 90 bp CCCTGGCTTGATGGGAGCAGTGAGGCAGGGAAGACCAGGGAGGCTTGTTGGCTGCTGGGTCCTCAGTGTTaGCATTGGATGGAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: PWLDGSSEAGKTREACWLLGPQC*HWMEAE
Trigger: TTCTGCCTCCATCCAATGTCAACACTGAGGACCCAG...CAGCCAACAAGCCTCCCTGGTCTTCCCTGCCTCACTGCTCCCATCAAGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR GCA 90 bp GGCCCAGCCTACTCTATAGGAATATACCCATGCAGGAGCCCACACGTCTGGTGTGCAGCCCTGGCCTGCTaGTCTGAATGTGGGTGGGAC +
Preference number: 2 (lower is better)
Translates to: GPAYSIGIYPCRSPHVWCAALAC*SECGWD
Trigger: GTCCCACCCACATTCAGAGCAGCAGGCCAGGGCTGC...ACACCAGACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAGGCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CAA 90 bp GGGCCCAGTACCCTCAGTAACACTAGCCCTTTACCATCCCTTCCCTaGCTGTTCCCACTGACATGTCTGGCAACTGGCCTGAGCCTCATC +
Preference number: 2 (lower is better)
Translates to: GPSTLSNTSPLPSLP*LFPLTCLATGLSLI
Trigger: GATGAGGCTCAGGCCAGTTGCCAGACATGTCAGTGGGAACAGCAAGGGAAGGGATGGTAAAGGGCTAGTGTTACTGAGGGTACTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR TCA 90 bp TATTGTCAGCATCCGGACAAGGCTGGGTCCTCAGTGTTGACATTGGATGGAGGCAGAACTGTGGAGGTGTaGCCACCTCCAGCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: YCQHPDKAGSSVLTLDGGRTVEV*PPPASP
Trigger: GGGACTGGCTGGAGGTGGTCACACCTCCACAGTTCT...GCCTCCATCCAATGTCAACACTGAGGACCCAGCCTTGTCCGGATGCTGACAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR GCA 90 bp GGTGTGACCACCTCCAGCCAGTCCCTGTATGTGCAGCTACTGTGTATATGGGGTGCCACAGGACAGTTCTaGACCCTATCTGGCCCCACA +
Preference number: 2 (lower is better)
Translates to: GVTTSSQSLYVQLLCIWGATGQF*TLSGPT
Trigger: TGTGGGGCCAGATAGGGTGCAGAACTGTCCTGTGGC...ACCCCATATACACAGTAGCTGCACATACAGGGACTGGCTGGAGGTGGTCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR TCA 90 bp GGCCCAGCCTACTCTATAGGAATATACCCATGCAGGAGCCCACACGTCTGGTGTTCCCCAGTGACAGTCTaGACTAGGCTCTCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: GPAYSIGIYPCRSPHVWCSPVTV*TRLSLH
Trigger: ATGCAGGGAGAGCCTAGTTCAGACTGTCACTGGGGA...ACACCAGACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAGGCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR TCA 90 bp CACCTGAAGAAATATGAGGCTGGGGATAGCAGAGGTGACCTGCCAGCAGGAGCCCGTTCCCTCTCCACCTaGGTTTTCCTTTCAATCTCC +
Preference number: 2 (lower is better)
Translates to: HLKKYEAGDSRGDLPAGARSLST*VFLSIS
Trigger: GGAGATTGAAAGGAAAACTCAGGTGGAGAGGGAACG...GGCTCCTGCTGGCAGGTCACCTCTGCTATCCCCAGCCTCATATTTCTTCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR GCA 90 bp TGTGACCACCTCCAGCCAGTCCCTGTATGTGCAGCTACTGTGTATATGGGGTCCACCTGGCACTTTGCCTaGCTGGGAGTGGATTTTCAG +
Preference number: 2 (lower is better)
Translates to: CDHLQPVPVCAATVYMGSTWHFA*LGVDFQ
Trigger: CTGAAAATCCACTCCCAGGCAGGCAAAGTGCCAGGT...GGACCCCATATACACAGTAGCTGCACATACAGGGACTGGCTGGAGGTGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR GCA 90 bp AGCTCCTTTCCTTACTACCCCGTTCCCTCTCCACCTGAGTTTTCCTTTCAATCTCCAGCAGCCCTGGCCTaGTGCTCTGAATGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: SSFPYYPVPSPPEFSFQSPAALA*CSECGW
Trigger: CCACCCACATTCAGAGCAGCAGGCCAGGGCTGCTGG...AGATTGAAAGGAAAACTCAGGTGGAGAGGGAACGGGGTAGTAAGGAAAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR TCA 90 bp CTACTCTATAGGAATATACCCATGCAGGAGCCCACACGTCTGGTGTCAAAACTCCCTTGCTGTTCCCACTaGCATGTCTGGCAACTGGCC +
Preference number: 2 (lower is better)
Translates to: LLYRNIPMQEPTRLVSKLPCCSH*HVWQLA
Trigger: GGCCAGTTGCCAGACATGTCAGTGGGAACAGCAAGG...GAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR TCA 90 bp TCTCATTGGCCCAGCCTACTCTATAGGAATATACCCATGCAGGAGCCCACACGTGTCAGTGCACATAAGTaGCCACTGTGTCACACCACA +
Preference number: 2 (lower is better)
Translates to: SHWPSLLYRNIPMQEPTRVSAHK*PLCHTT
Trigger: TGTGGTGTGACACAGTGGTCACTTATGTGCACTGAC...ACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAGGCTGGGCCAATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR TCA 90 bp TATTGTCAGCATCCGGACAAGGCTGGGTCCTCAGTGTTGACATTGGATGGAGGCGGATTTTCAGGCCTGTaGAAGGTCTCAAAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: YCQHPDKAGSSVLTLDGGGFSGL*KVSKVL
Trigger: AAGAACCTTTGAGACCTTTCACAGGCCTGAAAATCC...GCCTCCATCCAATGTCAACACTGAGGACCCAGCCTTGTCCGGATGCTGACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CCA 72 bp CAGGAACTCTCTGGGCGCCCATCCCAACGCCACCCCTaGCTTGATGGGAGCAGTGAGGCAGGGAAGACCAGG +
Preference number: 3 (lower is better)
Translates to: QELSGRPSQRHP*LDGSSEAGKTR
Trigger: CCTGGTCTTCCCTGCCTCACTGCTCCCATCAAGCCAGGGGTGGCGTTGGGATGGGCGCCCAGAGAGTTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CCA 72 bp CTGGGACGGAGCCACAGGACAGTTCTGCACCCTATCTaGCCCCACACATCAGATGTAGACCCCAGCGGGACA +
Preference number: 3 (lower is better)
Translates to: LGRSHRTVLHPI*PHTSDVDPSGT
Trigger: TGTCCCGCTGGGGTCTACATCTGATGTGTGGGGCCAGATAGGGTGCAGAACTGTCCTGTGGCTCCGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR GCA 72 bp CTACTGTGTATATGGGGTCCCTGTGCCCTCGAAGCCTaGCCGGAGGCACTCTGGGTAAGAGAGGTCAGGCTT +
Preference number: 3 (lower is better)
Translates to: LLCIWGPCALEA*PEALWVREVRL
Trigger: AAGCCTGACCTCTCTTACCCAGAGTGCCTCCGGGCAGGCTTCGAGGGCACAGGGACCCCATATACACAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR GCA 72 bp CCTGTATGTGCAGCTACTGTGTATATGGGGTCCCTGTaGCCTCGAAGCCTGCCCGGAGGCACTCTGGGTAAG +
Preference number: 3 (lower is better)
Translates to: PVCAATVYMGSL*PRSLPGGTLGK
Trigger: CTTACCCAGAGTGCCTCCGGGCAGGCTTCGAGGGCACAGGGACCCCATATACACAGTAGCTGCACATACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR TCA 72 bp CACAAGGCTGGGGCAAGCTGGGTCAGTGCACATAAGTaGCCACTGTGTCACACCACAACCAGCATGAGGCAA +
Preference number: 3 (lower is better)
Translates to: HKAGASWVSAHK*PLCHTTTSMRQ
Trigger: TTGCCTCATGCTGGTTGTGGTGTGACACAGTGGTCACTTATGTGCACTGACCCAGCTTGCCCCAGCCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR TCA 72 bp GCAGTGAGGCAGGGAAGACCAGGGAGGCTTGTTGGCTaGGCCTCTGAGAGGGTAAATGAGGAAGATCACAAG +
Preference number: 3 (lower is better)
Translates to: AVRQGRPGRLVG*ASERVNEEDHK
Trigger: CTTGTGATCTTCCTCATTTACCCTCTCAGAGGCTCAGCCAACAAGCCTCCCTGGTCTTCCCTGCCTCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CCA 72 bp TCCCTGCATAGAGAGAGAGTAAGCTCCCAGCAGCCCTaGCCTGCTGCTCTGAATGTGGGTGGGACAATGAAT +
Preference number: 3 (lower is better)
Translates to: SLHRERVSSQQP*PAALNVGGTMN
Trigger: ATTCATTGTCCCACCCACATTCAGAGCAGCAGGCCAGGGCTGCTGGGAGCTTACTCTCTCTCTATGCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CCA 72 bp CCTTCCCTTGCTGTTCCCACTGACATGTCTGGCAACTaGCCTGAGCCTCATCACAACTTGCCTCTACCTCTC +
Preference number: 3 (lower is better)
Translates to: PSLAVPTDMSGN*PEPHHNLPLPL
Trigger: GAGAGGTAGAGGCAAGTTGTGATGAGGCTCAGGCCAGTTGCCAGACATGTCAGTGGGAACAGCAAGGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR CAA 90 bp TGGCCTGAGCCTCATCACAACTTGCCTCTACCTCTCCCCCAGCTCCTTTCCTTAAAGAGAGGTCAGGCTTaGGGCCTAGATGCATCCTGT +
Preference number: 3 (lower is better)
Translates to: WPEPHHNLPLPLPQLLSLKRGQA*GLDASC
Trigger: ACAGGATGCATCTAGGCCCAAAGCCTGACCTCTCTT...TAAGGAAAGGAGCTGGGGGAGAGGTAGAGGCAAGTTGTGATGAGGCTCAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR CAA 90 bp TCTCATTGGCCCAGCCTACTCTATAGGAATATACCCATGCAGGAGCCCACACGTGAGCCTCATCACAACTaGCCTCTACCTCTCCCCCAG +
Preference number: 3 (lower is better)
Translates to: SHWPSLLYRNIPMQEPTREPHHN*PLPLPQ
Trigger: CTGGGGGAGAGGTAGAGGCAAGTTGTGATGAGGCTC...ACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAGGCTGGGCCAATGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR CAA 90 bp CTACTCTATAGGAATATACCCATGCAGGAGCCCACACGTCTGGTGTCAAAACTCAACGCCACCCCTGGCTaGATGGGAGCAGTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: LLYRNIPMQEPTRLVSKLNATPG*MGAVRQ
Trigger: CTGCCTCACTGCTCCCATCAAGCCAGGGGTGGCGTT...GAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR TCA 72 bp ATGGAAGGAGAGGCAGGGGACAGGGAAAGGTACACCTaGAGAAATATGAGGCTGGGGATAGCAGAGGTGACC +
Preference number: 3 (lower is better)
Translates to: MEGEAGDRERYT*RNMRLGIAEVT
Trigger: GGTCACCTCTGCTATCCCCAGCCTCATATTTCTTCAGGTGTACCTTTCCCTGTCCCCTGCCTCTCCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR CCA 72 bp TCTATAGGAATATACCCATGCAGGAGCCCACACGTCTaGTGTCAAAACTCAGCAGGAACTCTCTGGGCGCCC +
Preference number: 3 (lower is better)
Translates to: SIGIYPCRSPHV*CQNSAGTLWAP
Trigger: GGGCGCCCAGAGAGTTCCTGCTGAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTATATTCCTATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR TCA 72 bp AAGAGAGGTCAGGCTTTGGGCCTAGATGCATCCTGTTaGCTAAGGACTGGATGGGGTCACCCACTCTGTGAA +
Preference number: 3 (lower is better)
Translates to: KRGQALGLDASC*LRTGWGHPLCE
Trigger: TTCACAGAGTGGGTGACCCCATCCAGTCCTTAGTCAACAGGATGCATCTAGGCCCAAAGCCTGACCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR-3UTR CAA 90 bp ATACCCATGCAGGAGCCCACACGTCTGGTGTCAAAACTCAGCAGGAACTCTCTGTCCTCAGTGTTGACATaGGATGGAGGCAGAAGACAG +
Preference number: 3 (lower is better)
Translates to: IPMQEPTRLVSKLSRNSLSSVLT*DGGRRQ
Trigger: CTGTCTTCTGCCTCCATCCAATGTCAACACTGAGGA...CAGAGAGTTCCTGCTGAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR GCA 72 bp CTCATTGGCCCAGCCTACTCTATAGGAATATACCCATaGAGGAGCCCACACGTCTGGTGTCAAAACTCAGCA +
Preference number: 3 (lower is better)
Translates to: LIGPAYSIGIYP*RSPHVWCQNSA
Trigger: TGCTGAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAGGCTGGGCCAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR GCA 72 bp GCAAGCTTCAGAGAGTGGCCCCTCTCACACATGTGCTaGCATTATAGACACCGCTATCTACATAAACACCCT +
Preference number: 3 (lower is better)
Translates to: ASFREWPLSHMC*HYRHRYLHKHP
Trigger: AGGGTGTTTATGTAGATAGCGGTGTCTATAATGGCAGCACATGTGTGAGAGGGGCCACTCTCTGAAGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR GCA 72 bp ATTATAGACACCGCTATCTACATAAACACCCTTCCCTaGCTCTATACCACCCTGCTTGGCTCTCTGTCTCCA +
Preference number: 3 (lower is better)
Translates to: IIDTAIYINTLP*LYTTLLGSLSP
Trigger: TGGAGACAGAGAGCCAAGCAGGGTGGTATAGAGGCAGGGAAGGGTGTTTATGTAGATAGCGGTGTCTATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
3UTR TCA 72 bp CCTCTCCACCTGAGTTTTCCTTTCAATCTCCTGATTTaGCCCTCCCTTCCACATTTCAACCCAGACCTTAGT +
Preference number: 3 (lower is better)
Translates to: PLHLSFPFNLLI*PSLPHFNPDLS
Trigger: ACTAAGGTCTGGGTTGAAATGTGGAAGGGAGGGTCAAATCAGGAGATTGAAAGGAAAACTCAGGTGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR GCA 90 bp TCTCTGGGCGCCCATCCCAACGCCACCCCTGGCTTGATGGGAGCAGTGAGGCAGTCAGGTTCAGCAGGCTaGTGTGGGCCGTGGTTACCA +
Preference number: 4 (lower is better)
Translates to: SLGAHPNATPGLMGAVRQSGSAG*CGPWLP
Trigger: TGGTAACCACGGCCCACAGCAGCCTGCTGAACCTGA...CTGCCTCACTGCTCCCATCAAGCCAGGGGTGGCGTTGGGATGGGCGCCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR TCA 90 bp TGCAGGAGCCCACACGTCTGGTGTCAAAACTCAGCAGGAACTCTCTGGGCGCCCCCAGCGCCTTCTTCCTaGACCCTTTGGGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CRSPHVWCQNSAGTLWAPPAPSS*TLWGWP
Trigger: AGGCCAACCCCAAAGGGTTCAGGAAGAAGGCGCTGG...GGGCGCCCAGAGAGTTCCTGCTGAGTTTTGACACCAGACGTGTGGGCTCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR CCA 90 bp CCCATGCAGGAGCCCACACGTCTGGTGTCAAAACTCAGCAGGAACTCTCTGGGCTGCTGCAGTTGGGTGTaGGGCCCTGGCAGTAGACGT +
Preference number: 4 (lower is better)
Translates to: PMQEPTRLVSKLSRNSLGCCSWV*GPGSRR
Trigger: ACGTCTACTGCCAGGGCCCCACACCCAACTGCAGCA...GCCCAGAGAGTTCCTGCTGAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR TCA 90 bp TGCAGGAGCCCACACGTCTGGTGTCAAAACTCAGCAGGAACTCTCTGGGCGCCCTGGAGTTTCTGTGTGTaGTGGCCTCCACCATGGACT +
Preference number: 4 (lower is better)
Translates to: CRSPHVWCQNSAGTLWAPWSFCV*WPPPWT
Trigger: AGTCCATGGTGGAGGCCATCACACACAGAAACTCCA...GGGCGCCCAGAGAGTTCCTGCTGAGTTTTGACACCAGACGTGTGGGCTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR GCA 90 bp TGTGACCACCTCCAGCCAGTCCCTGTATGTGCAGCTACTGTGTATATGGGGTCCGTCGCAGGGAGGCCATaGCCACAGGTGACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CDHLQPVPVCAATVYMGSVAGRP*PQVTSS
Trigger: AGAGGAAGTCACCTGTGGGCATGGCCTCCCTGCGAC...GGACCCCATATACACAGTAGCTGCACATACAGGGACTGGCTGGAGGTGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR GCA 90 bp CCCTGGCTTGATGGGAGCAGTGAGGCAGGGAAGACCAGGGAGGCTTGTTGGCTGTGCAGACAATCATGGTaGCATTCTCGATCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PWLDGSSEAGKTREACWLCRQSW*HSRSCG
Trigger: ACCACAGGATCGAGAATGGCACCATGATTGTCTGCA...CAGCCAACAAGCCTCCCTGGTCTTCCCTGCCTCACTGCTCCCATCAAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR GCA 90 bp CATCCGGACAAGGCTGGGTCCTCAGTGTTGACATTGGATGGAGGCAGAAGACAGACGGGTCATAGATGCTaGAGTTGGGTGTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HPDKAGSSVLTLDGGRRQTGHRC*SWVWGP
Trigger: AGGGCCCCACACCCAACTGCAGCATCTATGACCCGT...CTGTCTTCTGCCTCCATCCAATGTCAACACTGAGGACCCAGCCTTGTCCGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR TCA 90 bp CTACTCTATAGGAATATACCCATGCAGGAGCCCACACGTCTGGTGTCAAAACTCGGCCATGCCCACAGGTaGCTTCCTCTGGGTACGGGT +
Preference number: 4 (lower is better)
Translates to: LLYRNIPMQEPTRLVSKLGHAHR*LPLGTG
Trigger: ACCCGTACCCAGAGGAAGTCACCTGTGGGCATGGCC...GAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR CCA 90 bp TTTCCTTACTACCCCGTTCCCTCTCCACCTGAGTTTTCCTTTCAATCTCCTGATGGCTGCTGTGGGCCGTaGTTACCACACTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: FPYYPVPSPPEFSFQSPDGCCGP*LPHCRP
Trigger: TGGCCGGCAGTGTGGTAACCACGGCCCACAGCAGCC...ATCAGGAGATTGAAAGGAAAACTCAGGTGGAGAGGGAACGGGGTAGTAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR CCA 90 bp ATACCCATGCAGGAGCCCACACGTCTGGTGTCAAAACTCAGCAGGAACTCTCTGCAACAGTCGTGGGCATaGCAGCACCAGTCTACCTCA +
Preference number: 4 (lower is better)
Translates to: IPMQEPTRLVSKLSRNSLQQSWA*QHQSTS
Trigger: TGAGGTAGACTGGTGCTGCCATGCCCACGACTGTTG...CAGAGAGTTCCTGCTGAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR TCA 90 bp GCCTGCCTGGGAGTGGATTTTCAGGCCTGTGAAAGGTCTCAAAGGTTCTTGGAGTGTATGGGTGATCCTTaGGGCACAGAGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ACLGVDFQACERSQRFLECMGDP*GTESGS
Trigger: AGAGCCTGACTCTGTGCCTCAAGGATCACCCATACA...CTCCAAGAACCTTTGAGACCTTTCACAGGCCTGAAAATCCACTCCCAGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR GCA 90 bp TCTCATTGGCCCAGCCTACTCTATAGGAATATACCCATGCAGGAGCCCACACGTTCACACTCGCATGTCTaGTTGTCACACTCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: SHWPSLLYRNIPMQEPTRSHSHV*LSHSVS
Trigger: TGAGACGGAGTGTGACAAGCAGACATGCGAGTGTGA...ACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTAGGCTGGGCCAATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR CCA 90 bp TACTCTATAGGAATATACCCATGCAGGAGCCCACACGTCTGGTGTCAAAACTCACATAGATGCTGCAGTTaGGTGTGGGGCCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: YSIGIYPCRSPHVWCQNSHRCCS*VWGPGS
Trigger: ACTGCCAGGGCCCCACACCCAACTGCAGCATCTATG...TGAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTATATTCCTATAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR CCA 90 bp TTTCCTTACTACCCCGTTCCCTCTCCACCTGAGTTTTCCTTTCAATCTCCTGATACAGGTGACTTCCTCTaGGTACGGGTCATAGATGCT +
Preference number: 4 (lower is better)
Translates to: FPYYPVPSPPEFSFQSPDTGDFL*VRVIDA
Trigger: AGCATCTATGACCCGTACCCAGAGGAAGTCACCTGT...ATCAGGAGATTGAAAGGAAAACTCAGGTGGAGAGGGAACGGGGTAGTAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CCA 90 bp TGTGTGATGGCCTCCACCATGGACTTCAGGTTCAGCAGGCTGCTGTaGGCCGTGGTTACCACACTGCCGGCCAGGACTGCGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: CVMASTMDFRFSRLL*AVVTTLPARTAMAK
Trigger: CTTTGCCATCGCAGTCCTGGCCGGCAGTGTGGTAACCACGGCCCACAGCAGCCTGCTGAACCTGAAGTCCATGGTGGAGGCCATCACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS GCA 90 bp CAGCAGGCTGCTGTGGGCCGTGGTTACCACACTGCCGGCCAGGACTaGGATGGCAAAGAATTTCTTCATACCCAGGCTGGACCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: QQAAVGRGYHTAGQD*DGKEFLHTQAGPGG
Trigger: ACCTCCAGGTCCAGCCTGGGTATGAAGAAATTCTTTGCCATCGCAGTCCTGGCCGGCAGTGTGGTAACCACGGCCCACAGCAGCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CCA 90 bp ACCCAGGCTGGACCTGGAGGTTTTAGAGGGAGAGGCCCTGAGGCTTaGGCTCTTCCGTCCAGTGGAGTGTTTAACCAGCGCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: TQAGPGGFRGRGPEA*ALPSSGVFNQRLLP
Trigger: AGGAAGAAGGCGCTGGTTAAACACTCCACTGGACGGAAGAGCCCAAGCCTCAGGGCCTCTCCCTCTAAAACCTCCAGGTCCAGCCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CCA 90 bp TGGCCTCCACCATGGACTTCAGGTTCAGCAGGCTGCTGTGGGCCGTaGTTACCACACTGCCGGCCAGGACTGCGATGGCAAAGAATTTCT +
Preference number: 5 (lower is better)
Translates to: WPPPWTSGSAGCCGP*LPHCRPGLRWQRIS
Trigger: AGAAATTCTTTGCCATCGCAGTCCTGGCCGGCAGTGTGGTAACCACGGCCCACAGCAGCCTGCTGAACCTGAAGTCCATGGTGGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS TCA 90 bp AGTAGCAGCCGTAGCCCACAAAGGACAGGATGGAGTTTCTGTGTGTaGTGGCCTCCACCATGGACTTCAGGTTCAGCAGGCTGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SSSRSPQRTGWSFCV*WPPPWTSGSAGCCG
Trigger: CCCACAGCAGCCTGCTGAACCTGAAGTCCATGGTGGAGGCCATCACACACAGAAACTCCATCCTGTCCTTTGTGGGCTACGGCTGCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CCA 90 bp GCCCTGGCAGTAGACGTTGAAGTAGCCTCGGTACTTGTTCCTGTATaGGTGATCCTTGAGGCACAGAGTCAGGCTCTTGTCACACTCGCA +
Preference number: 5 (lower is better)
Translates to: ALAVDVEVASVLVPV*VILEAQSQALVTLA
Trigger: TGCGAGTGTGACAAGAGCCTGACTCTGTGCCTCAAGGATCACCCATACAGGAACAAGTACCGAGGCTACTTCAACGTCTACTGCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS-3UTR CAA 90 bp ATACCCATGCAGGAGCCCACACGTCTGGTGTCAAAACTCAGCAGGAACTCTCTGCACTCGCATGTCTGCTaGTCACACTCCGTCTCATTG +
Preference number: 5 (lower is better)
Translates to: IPMQEPTRLVSKLSRNSLHSHVC*SHSVSL
Trigger: CAATGAGACGGAGTGTGACAAGCAGACATGCGAGTG...CAGAGAGTTCCTGCTGAGTTTTGACACCAGACGTGTGGGCTCCTGCATGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS TCA 90 bp GGCTCTTGTCACACTCGCATGTCTGCTTGTCACACTCCGTCTCATTaGGCTCAGTGCAGACAATCATGGTGCCATTCTCGATCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GSCHTRMSACHTPSH*AQCRQSWCHSRSCG
Trigger: ACCACAGGATCGAGAATGGCACCATGATTGTCTGCACTGAGCTCAATGAGACGGAGTGTGACAAGCAGACATGCGAGTGTGACAAGAGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CCA 72 bp GCCTCCACCATGGACTTCAGGTTCAGCAGGCTGCTGTaGGCCGTGGTTACCACACTGCCGGCCAGGACTGCG +
Preference number: 6 (lower is better)
Translates to: ASTMDFRFSRLL*AVVTTLPARTA
Trigger: CGCAGTCCTGGCCGGCAGTGTGGTAACCACGGCCCACAGCAGCCTGCTGAACCTGAAGTCCATGGTGGAGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CCA 72 bp GGGCCGTGGTTACCACACTGCCGGCCAGGACTGCGATaGCAAAGAATTTCTTCATACCCAGGCTGGACCTGG +
Preference number: 6 (lower is better)
Translates to: GPWLPHCRPGLR*QRISSYPGWTW
Trigger: CCAGGTCCAGCCTGGGTATGAAGAAATTCTTTGCCATCGCAGTCCTGGCCGGCAGTGTGGTAACCACGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS GCA 72 bp GCTGTGGGCCGTGGTTACCACACTGCCGGCCAGGACTaGGATGGCAAAGAATTTCTTCATACCCAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: AVGRGYHTAGQD*DGKEFLHTQAG
Trigger: TCCAGCCTGGGTATGAAGAAATTCTTTGCCATCGCAGTCCTGGCCGGCAGTGTGGTAACCACGGCCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS GCA 72 bp AGGCACAGAGTCAGGCTCTTGTCACACTCGCATGTCTaGTTGTCACACTCCGTCTCATTGAGCTCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: RHRVRLLSHSHV*LSHSVSLSSVQ
Trigger: CTGCACTGAGCTCAATGAGACGGAGTGTGACAAGCAGACATGCGAGTGTGACAAGAGCCTGACTCTGTGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CAA 72 bp CACAGAGTCAGGCTCTTGTCACACTCGCATGTCTGCTaGTCACACTCCGTCTCATTGAGCTCAGTGCAGACA +
Preference number: 6 (lower is better)
Translates to: HRVRLLSHSHVC*SHSVSLSSVQT
Trigger: TGTCTGCACTGAGCTCAATGAGACGGAGTGTGACAAGCAGACATGCGAGTGTGACAAGAGCCTGACTCTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CAA 90 bp AGGCTCTTGTCACACTCGCATGTCTGCTTGTCACACTCCGTCTCATaGAGCTCAGTGCAGACAATCATGGTGCCATTCTCGATCCTGTGG +
Preference number: 6 (lower is better)
Translates to: RLLSHSHVCLSHSVS*SSVQTIMVPFSILW
Trigger: CCACAGGATCGAGAATGGCACCATGATTGTCTGCACTGAGCTCAATGAGACGGAGTGTGACAAGCAGACATGCGAGTGTGACAAGAGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CAA 90 bp TCCTTGAGGCACAGAGTCAGGCTCTTGTCACACTCGCATGTCTGCTaGTCACACTCCGTCTCATTGAGCTCAGTGCAGACAATCATGGTG +
Preference number: 6 (lower is better)
Translates to: SLRHRVRLLSHSHVC*SHSVSLSSVQTIMV
Trigger: CACCATGATTGTCTGCACTGAGCTCAATGAGACGGAGTGTGACAAGCAGACATGCGAGTGTGACAAGAGCCTGACTCTGTGCCTCAAGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS TCA 72 bp CACACTCGCATGTCTGCTTGTCACACTCCGTCTCATTaGGCTCAGTGCAGACAATCATGGTGCCATTCTCGA +
Preference number: 6 (lower is better)
Translates to: HTRMSACHTPSH*AQCRQSWCHSR
Trigger: TCGAGAATGGCACCATGATTGTCTGCACTGAGCTCAATGAGACGGAGTGTGACAAGCAGACATGCGAGTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CCA 72 bp GTAGACGTTGAAGTAGCCTCGGTACTTGTTCCTGTATaGGTGATCCTTGAGGCACAGAGTCAGGCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: VDVEVASVLVPV*VILEAQSQALV
Trigger: GACAAGAGCCTGACTCTGTGCCTCAAGGATCACCCATACAGGAACAAGTACCGAGGCTACTTCAACGTCTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7
CDS CAA 72 bp TCACACTCGCATGTCTGCTTGTCACACTCCGTCTCATaGAGCTCAGTGCAGACAATCATGGTGCCATTCTCG +
Preference number: 6 (lower is better)
Translates to: SHSHVCLSHSVS*SSVQTIMVPFS
Trigger: CGAGAATGGCACCATGATTGTCTGCACTGAGCTCAATGAGACGGAGTGTGACAAGCAGACATGCGAGTGTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030526.7