Pregenerated sensors for PLA2G2E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028751Ensembl transcript IDs: ENSMUST00000030531.14, ENSMUST00000105803.2, ENSMUST00000105804.2
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCTCTTATTCAGAAGAGGGTATTGAGATGCCAGAGGCGACTTAGTGGATCTTGTGAGCTTCTCTGGGCCTaGGACTGCAGCAGCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SLIQKRVLRCQRRLSGSCELLWA*DCSSLG Trigger: CCCCAGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTC...ACAAGATCCACTAAGTCGCCTCTGGCATCTCAATACCCTCTTCTGAATAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTATTCAGAAGAGGGTATTGAGATGCCAGAGGCGACTTAGTGGATCTTGTGAGACTGCAGCAGCCTaGGGTGGCTATGGAGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: SLIQKRVLRCQRRLSGSCETAAA*GGYGAE Trigger: CTCGGCTCCATAGCCACCCCAGGCTGCTGCAGTCTC...ACAAGATCCACTAAGTCGCCTCTGGCATCTCAATACCCTCTTCTGAATAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTATTCAGAAGAGGGTATTGAGATGCCAGAGGCGACTTAGTGGATCTTGTGATCTGGTGTGGTCCTaGAGGCCAGAGACCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLIQKRVLRCQRRLSGSCDLVWS*RPETRA Trigger: AGCCCTGGTCTCTGGCCTCCAGGACCACACCAGATC...ACAAGATCCACTAAGTCGCCTCTGGCATCTCAATACCCTCTTCTGAATAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTATTCAGAAGAGGGTATTGAGATGCCAGAGGCGACTTAGTGGATCTTGTCTTCAGCTGATCCCGTaGATCTGGTGTGGTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SLIQKRVLRCQRRLSGSCLQLIP*IWCGPG Trigger: TCCAGGACCACACCAGATCCACGGGATCAGCTGAAG...ACAAGATCCACTAAGTCGCCTCTGGCATCTCAATACCCTCTTCTGAATAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| 3UTR TCA 72 bp | CTTGTGAGCGCTGACGAGTCCCGTGACTTCTTCAGCTaGTCCCGTGGATCTGGTGTGGTCCTGGAGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LVSADESRDFFS*SRGSGVVLEAR Trigger: TCTGGCCTCCAGGACCACACCAGATCCACGGGATCAGCTGAAGAAGTCACGGGACTCGTCAGCGCTCACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| 3UTR TCA 72 bp | CAGGAAAATAGACTTCTCTTATTCAGAAGAGGGTATTaGGATGCCAGAGGCGACTTAGTGGATCTTGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: QENRLLLFRRGY*DARGDLVDLVS Trigger: GCTCACAAGATCCACTAAGTCGCCTCTGGCATCTCAATACCCTCTTCTGAATAAGAGAAGTCTATTTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CCA 90 bp | GAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTGGGGTGTCGTCCACTGGCCAGTaGGAGCCACCGACACCGCAA | + |
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Preference number: 4 (lower is better) Translates to: EESGFRASLGLRLQQPGVSSTGQ*EPPTPQ Trigger: TTGCGGTGTCGGTGGCTCCCACTGGCCAGTGGACGA...CACCCCAGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CCA 90 bp | GAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTGGGGTGATCCGTCTCGTCCACTaGCCAGTGGGAGCCACCGAC | + |
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Preference number: 4 (lower is better) Translates to: EESGFRASLGLRLQQPGVIRLVH*PVGATD Trigger: GTCGGTGGCTCCCACTGGCCAGTGGACGAGACGGAT...CACCCCAGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAGAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTTCGTCCACTGGCCAGTaGGAGCCACCGACACCGCAA | + |
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Preference number: 4 (lower is better) Translates to: LGEESGFRASLGLRLQQPSSTGQ*EPPTPQ Trigger: TTGCGGTGTCGGTGGCTCCCACTGGCCAGTGGACGA...AGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTCTCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAGAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTATCCGTCTCGTCCACTaGCCAGTGGGAGCCACCGAC | + |
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Preference number: 4 (lower is better) Translates to: LGEESGFRASLGLRLQQPIRLVH*PVGATD Trigger: GTCGGTGGCTCCCACTGGCCAGTGGACGAGACGGAT...AGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTCTCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAGAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTATCATCACTCCAAACTaGACCAGGTTCCCGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LGEESGFRASLGLRLQQPIITPN*TRFPPA Trigger: GGCTGGCGGGAACCTGGTCCAGTTTGGAGTGATGAT...AGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTCTCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAGAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTGGTACTTTTCCAGCTTaGGGTCACAGCCCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LGEESGFRASLGLRLQQPGTFPA*GHSPAS Trigger: AGAAGCTGGGCTGTGACCCCAAGCTGGAAAAGTACC...AGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTCTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CCA 90 bp | GAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTGGGGTGCAGTACACAGCTTGTTaGGGTAGTGGGCATACTTGC | + |
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Preference number: 4 (lower is better) Translates to: EESGFRASLGLRLQQPGVQYTAC*GSGHTC Trigger: GCAAGTATGCCCACTACCCCAACAAGCTGTGTACTG...CACCCCAGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTATTCAGAAGAGGGTATTGAGATGCCAGAGGCGACTTAGTGGATCTTGTGGTACTTTTCCAGCTTaGGGTCACAGCCCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLIQKRVLRCQRRLSGSCGTFPA*GHSPAS Trigger: AGAAGCTGGGCTGTGACCCCAAGCTGGAAAAGTACC...ACAAGATCCACTAAGTCGCCTCTGGCATCTCAATACCCTCTTCTGAATAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTATTCAGAAGAGGGTATTGAGATGCCAGAGGCGACTTAGTGGATCTTGTCAGTACACAGCTTGTTaGGGTAGTGGGCATACTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLIQKRVLRCQRRLSGSCQYTAC*GSGHTC Trigger: GCAAGTATGCCCACTACCCCAACAAGCTGTGTACTG...ACAAGATCCACTAAGTCGCCTCTGGCATCTCAATACCCTCTTCTGAATAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CAA 90 bp | GAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTGGGGTGCAGAGAGCGGCTCTCTaGTCACACTCGCAGGTATGC | + |
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Preference number: 5 (lower is better) Translates to: EESGFRASLGLRLQQPGVQRAAL*SHSQVC Trigger: GCATACCTGCGAGTGTGACAAGAGAGCCGCTCTCTG...CACCCCAGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CAA 90 bp | GAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTGGGGTGAGGTACTTTTCCAGCTaGGGGTCACAGCCCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: EESGFRASLGLRLQQPGVRYFSS*GSQPSF Trigger: GAAGCTGGGCTGTGACCCCAAGCTGGAAAAGTACCT...CACCCCAGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS-3UTR CAA 90 bp | CTGGGAGAGGAATCTGGGTTCCGAGCTTCTCTGGGCCTGAGACTGCAGCAGCCTAGGTACTTTTCCAGCTaGGGGTCACAGCCCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LGEESGFRASLGLRLQQPRYFSS*GSQPSF Trigger: GAAGCTGGGCTGTGACCCCAAGCTGGAAAAGTACCT...AGGCTGCTGCAGTCTCAGGCCCAGAGAAGCTCGGAACCCAGATTCCTCTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS GCA 90 bp | GTGGGGTGGGCCCAGTACACAGCTTGTTGGGGTAGTGGGCATACTTaGGGTTGTAAGTGTTCAGGTTGTGGCGAAAGCAGAGAGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: VGWAQYTACWGSGHT*GCKCSGCGESRERL Trigger: GAGCCGCTCTCTGCTTTCGCCACAACCTGAACACTTACAACCGCAAGTATGCCCACTACCCCAACAAGCTGTGTACTGGGCCCACCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS GCA 90 bp | TTGTGGCGAAAGCAGAGAGCGGCTCTCTTGTCACACTCGCAGGTATaGCGCTGGCAAGCCGTTCTACCAGCACAGAAGATGTTGTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: LWRKQRAALLSHSQV*RWQAVLPAQKMLSR Trigger: TCGAGACAACATCTTCTGTGCTGGTAGAACGGCTTGCCAGCGGCATACCTGCGAGTGTGACAAGAGAGCCGCTCTCTGCTTTCGCCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030531.14 ENSMUST00000105803.2 ENSMUST00000105804.2 |
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| CDS CCA 90 bp | CGAAAGCAGAGAGCGGCTCTCTTGTCACACTCGCAGGTATGCCGCTaGCAAGCCGTTCTACCAGCACAGAAGATGTTGTCTCGAGTGATA | + |
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Preference number: 5 (lower is better) Translates to: RKQRAALLSHSQVCR*QAVLPAQKMLSRVI Trigger: TATCACTCGAGACAACATCTTCTGTGCTGGTAGAACGGCTTGCCAGCGGCATACCTGCGAGTGTGACAAGAGAGCCGCTCTCTGCTTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030531.14 ENSMUST00000105803.2 ENSMUST00000105804.2 |
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| CDS-3UTR CAA 90 bp | TCTCTTATTCAGAAGAGGGTATTGAGATGCCAGAGGCGACTTAGTGGATCTTGTCAGAGAGCGGCTCTCTaGTCACACTCGCAGGTATGC | + |
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Preference number: 5 (lower is better) Translates to: SLIQKRVLRCQRRLSGSCQRAAL*SHSQVC Trigger: GCATACCTGCGAGTGTGACAAGAGAGCCGCTCTCTG...ACAAGATCCACTAAGTCGCCTCTGGCATCTCAATACCCTCTTCTGAATAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS CCA 72 bp | GTCATGGGCATGACAACACCAATCCGTCTCGTCCACTaGCCAGTGGGAGCCACCGACACCGCAATAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VMGMTTPIRLVH*PVGATDTAIAA Trigger: GGCTGCTATTGCGGTGTCGGTGGCTCCCACTGGCCAGTGGACGAGACGGATTGGTGTTGTCATGCCCATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030531.14 ENSMUST00000105803.2 ENSMUST00000105804.2 |
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| CDS CAA 72 bp | GTGTTCAGGTTGTGGCGAAAGCAGAGAGCGGCTCTCTaGTCACACTCGCAGGTATGCCGCTGGCAAGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: VFRLWRKQRAAL*SHSQVCRWQAV Trigger: AACGGCTTGCCAGCGGCATACCTGCGAGTGTGACAAGAGAGCCGCTCTCTGCTTTCGCCACAACCTGAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS CCA 72 bp | AGAGCGGCTCTCTTGTCACACTCGCAGGTATGCCGCTaGCAAGCCGTTCTACCAGCACAGAAGATGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RAALLSHSQVCR*QAVLPAQKMLS Trigger: AGACAACATCTTCTGTGCTGGTAGAACGGCTTGCCAGCGGCATACCTGCGAGTGTGACAAGAGAGCCGCTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030531.14 ENSMUST00000105803.2 ENSMUST00000105804.2 |
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| CDS GCA 72 bp | GCCCAGTACACAGCTTGTTGGGGTAGTGGGCATACTTaGGGTTGTAAGTGTTCAGGTTGTGGCGAAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: AQYTACWGSGHT*GCKCSGCGESR Trigger: TCTGCTTTCGCCACAACCTGAACACTTACAACCGCAAGTATGCCCACTACCCCAACAAGCTGTGTACTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030531.14 ENSMUST00000105804.2 |
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| CDS CAA 90 bp | TCGCAGGTATGCCGCTGGCAAGCCGTTCTACCAGCACAGAAGATGTaGTCTCGAGTGATAGAGAAGAGGTACTTTTCCAGCTTGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SQVCRWQAVLPAQKM*SRVIEKRYFSSLGS Trigger: TGACCCCAAGCTGGAAAAGTACCTCTTCTCTATCACTCGAGACAACATCTTCTGTGCTGGTAGAACGGCTTGCCAGCGGCATACCTGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030531.14 ENSMUST00000105803.2 ENSMUST00000105804.2 |
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| CDS CAA 72 bp | TGCCGCTGGCAAGCCGTTCTACCAGCACAGAAGATGTaGTCTCGAGTGATAGAGAAGAGGTACTTTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CRWQAVLPAQKM*SRVIEKRYFSS Trigger: GCTGGAAAAGTACCTCTTCTCTATCACTCGAGACAACATCTTCTGTGCTGGTAGAACGGCTTGCCAGCGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030531.14 ENSMUST00000105803.2 ENSMUST00000105804.2 |
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