Pregenerated sensors for PLA2G2D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041202Ensembl transcript IDs: ENSMUST00000030528.9, ENSMUST00000105806.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAGACACCAGAGTGGGAGGCAGCAAGCTGCAGGACTTCAATGCTTaGGATGTCCCAGGACAGGGTGGAATCCAGGGGACAGACAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: LDTRVGGSKLQDFNA*DVPGQGGIQGTDRV Trigger: CACTCTGTCTGTCCCCTGGATTCCACCCTGTCCTGGGACATCTCAAGCATTGAAGTCCTGCAGCTTGCTGCCTCCCACTCTGGTGTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR TCA 90 bp | ACCAAGAGGAAGTCCTCAAGGCCAGGCCCTTTTGCAAGGAGACCTTaGAAAGCCAGCTGGTCCAGGAGACTAGACACCAGAGTGGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: TKRKSSRPGPFARRP*KASWSRRLDTRVGG Trigger: GCCTCCCACTCTGGTGTCTAGTCTCCTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACTTCCTCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR GCA 90 bp | GAGACTAGACACCAGAGTGGGAGGCAGCAAGCTGCAGGACTTCAATaGTTGAGATGTCCCAGGACAGGGTGGAATCCAGGGGACAGACAG | + |
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Preference number: 1 (lower is better) Translates to: ETRHQSGRQQAAGLQ*LRCPRTGWNPGDRQ Trigger: CTGTCTGTCCCCTGGATTCCACCCTGTCCTGGGACATCTCAAGCATTGAAGTCCTGCAGCTTGCTGCCTCCCACTCTGGTGTCTAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR GCA 90 bp | CACAACGGGCAAGAAACAGCAGGCCAAGCTCCAGGACCCACCGAGTaGAACAAGACTGCAACTTCCCCCACCCTTAAATCCCGTTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: HNGQETAGQAPGPTE*NKTATSPTLKSRCC Trigger: ACAACAACGGGATTTAAGGGTGGGGGAAGTTGCAGTCTTGTTGCACTCGGTGGGTCCTGGAGCTTGGCCTGCTGTTTCTTGCCCGTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR GCA 90 bp | ACAGTAGAAAGGCACCAAGAGGAAGTCCTCAAGGCCAGGCCCTTTTaGAAGGAGACCTTGAAAAGCCAGCTGGTCCAGGAGACTAGACAC | + |
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Preference number: 1 (lower is better) Translates to: TVERHQEEVLKARPF*KETLKSQLVQETRH Trigger: GTGTCTAGTCTCCTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACTTCCTCTTGGTGCCTTTCTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR CCA 90 bp | GCTAGAGTCCCTTCAATGCCAATAGCTGCAGGGATGAAGGTAGGCTaGGTCAGTTTGAGCCAGAAAGGATACTCAGCAAAGCTATCCCTC | + |
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Preference number: 1 (lower is better) Translates to: ARVPSMPIAAGMKVG*VSLSQKGYSAKLSL Trigger: GAGGGATAGCTTTGCTGAGTATCCTTTCTGGCTCAAACTGACCCAGCCTACCTTCATCCCTGCAGCTATTGGCATTGAAGGGACTCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| 3UTR TCA 90 bp | GGGCTCTTTGGAGAAAGTTTCCAGAGAAAGAAACCAGGCCTGGGATaGGACAAAGTACTGGAACATCTATCATCCTGGTCTCAGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: GLFGESFQRKKPGLG*DKVLEHLSSWSQEK Trigger: TTTCTCCTGAGACCAGGATGATAGATGTTCCAGTACTTTGTCTCATCCCAGGCCTGGTTTCTTTCTCTGGAAACTTTCTCCAAAGAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR-3UTR CCA 90 bp | CGCTGGGGAGAATGGCTAGCCAAGAGAGGCTTCCAAAGGACGGCCCCGGAGCCTTGTCCCAGGACAGGGTaGAATCCAGGGGACAGACAG | + |
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Preference number: 2 (lower is better) Translates to: RWGEWLAKRGFQRTAPEPCPRTG*NPGDRQ Trigger: CTGTCTGTCCCCTGGATTCCACCCTGTCCTGGGACA...AGGCTCCGGGGCCGTCCTTTGGAAGCCTCTCTTGGCTAGCCATTCTCCCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTGTGATGCCACCCAGACAGTCCAGCCCAATGATGTCCTTAGCGCTGGGGTGTCCCAGGACAGGGTaGAATCCAGGGGACAGACAG | + |
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Preference number: 2 (lower is better) Translates to: WAVMPPRQSSPMMSLALGCPRTG*NPGDRQ Trigger: CTGTCTGTCCCCTGGATTCCACCCTGTCCTGGGACA...CCCCAGCGCTAAGGACATCATTGGGCTGGACTGTCTGGGTGGCATCACAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR CAA 90 bp | CACCAAGAGGAAGTCCTCAAGGCCAGGCCCTTTTGCAAGGAGACCTaGAAAAGCCAGCTGGTCCAGGAGACTAGACACCAGAGTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: HQEEVLKARPFCKET*KSQLVQETRHQSGR Trigger: CCTCCCACTCTGGTGTCTAGTCTCCTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACTTCCTCTTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR-3UTR TCA 90 bp | CGGAGCCTGAGCTATTATGCAGCAAGAGATCCCAGCGAAAGCACAACGGGCAAGACAGCATCAGAGGGCTaGGCTCTGACCTTGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RSLSYYAARDPSESTTGKTASEG*ALTLVQ Trigger: CTGGACCAAGGTCAGAGCTCAGCCCTCTGATGCTGT...CTTGCCCGTTGTGCTTTCGCTGGGATCTCTTGCTGCATAATAGCTCAGGCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTGTGATGCCACCCAGACAGTCCAGCCCAATGATGTCCTTAGCGCTGGGGCCACTGAATCTGAAATaGGGCAGGGCTGAACCTAGA | + |
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Preference number: 2 (lower is better) Translates to: WAVMPPRQSSPMMSLALGPLNLK*GRAEPR Trigger: TCTAGGTTCAGCCCTGCCCCATTTCAGATTCAGTGG...CCCCAGCGCTAAGGACATCATTGGGCTGGACTGTCTGGGTGGCATCACAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR CAA 90 bp | ACTAGACACCAGAGTGGGAGGCAGCAAGCTGCAGGACTTCAATGCTaGAGATGTCCCAGGACAGGGTGGAATCCAGGGGACAGACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: TRHQSGRQQAAGLQC*RCPRTGWNPGDRQS Trigger: ACTCTGTCTGTCCCCTGGATTCCACCCTGTCCTGGGACATCTCAAGCATTGAAGTCCTGCAGCTTGCTGCCTCCCACTCTGGTGTCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGCCATGCTTGCCAGGTCTAGGCTAGCTAGAGTCCCTTCAATGCCAATATTAGGCCGGTGGTTCTaGGAGGGAGAGAGGTCATGG | + |
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Preference number: 2 (lower is better) Translates to: ARAMLARSRLARVPSMPILGRWF*EGERSW Trigger: CCATGACCTCTCTCCCTCCCAGAACCACCGGCCTAA...TATTGGCATTGAAGGGACTCTAGCTAGCCTAGACCTGGCAAGCATGGCTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| 3UTR-3UTR TCA 90 bp | GCAACAAGACTGCAACTTCCCCCACCCTTAAATCCCGTTGTTGTTGGAGCCCATCAGAGGGCTGAGCTCTaGCCTTGGTCCAGAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: ATRLQLPPPLNPVVVGAHQRAEL*PWSRKT Trigger: GGTCTTTCTGGACCAAGGTCAGAGCTCAGCCCTCTG...ATGGGCTCCAACAACAACGGGATTTAAGGGTGGGGGAAGTTGCAGTCTTGTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGAGCCTGAGCTATTATGCAGCAAGAGATCCCAGCGAAAGCACAACGGGCAACCACTGAATCTGAAATaGGGCAGGGCTGAACCTAGA | + |
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Preference number: 2 (lower is better) Translates to: PEPELLCSKRSQRKHNGQPLNLK*GRAEPR Trigger: TCTAGGTTCAGCCCTGCCCCATTTCAGATTCAGTGG...TTGCCCGTTGTGCTTTCGCTGGGATCTCTTGCTGCATAATAGCTCAGGCTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGCCATGCTTGCCAGGTCTAGGCTAGCTAGAGTCCCTTCAATGCCAATAGAAAGAAACCAGGCCTaGGATGAGACAAAGTACTGG | + |
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Preference number: 2 (lower is better) Translates to: ARAMLARSRLARVPSMPIERNQA*DETKYW Trigger: CCAGTACTTTGTCTCATCCCAGGCCTGGTTTCTTTC...TATTGGCATTGAAGGGACTCTAGCTAGCCTAGACCTGGCAAGCATGGCTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| 3UTR-3UTR TCA 90 bp | ATGAGACAAAGTACTGGAACATCTATCATCCTGGTCTCAGGAGAAATGTGGGCTCAGAGGGCTGAGCTCTaGCCTTGGTCCAGAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: MRQSTGTSIILVSGEMWAQRAEL*PWSRKT Trigger: GGTCTTTCTGGACCAAGGTCAGAGCTCAGCCCTCTG...AGCCCACATTTCTCCTGAGACCAGGATGATAGATGTTCCAGTACTTTGTCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGCTAAGGAAAGTTCTGAGGTTTGTAATTAGGCCGGTGGTTCTGGGAGGGAGTCAGGGGCTCTTGTaGAAGTTGTTTATTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QQLRKVLRFVIRPVVLGGSQGLL*KLFIKR Trigger: CCTCTTAATAAACAACTTTCACAAGAGCCCCTGACT...CCCTCCCAGAACCACCGGCCTAATTACAAACCTCAGAACTTTCCTTAGCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGTAGGCTGGGTCAGTTTGAGCCAGAAAGGATACTCAGCAAAGCTATCCCTCATTAAGAGGGCTCTTTaGAGAAAGTTTCCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: KVGWVSLSQKGYSAKLSLIKRAL*RKFPEK Trigger: TTTCTCTGGAAACTTTCTCCAAAGAGCCCTCTTAAT...GAGGGATAGCTTTGCTGAGTATCCTTTCTGGCTCAAACTGACCCAGCCTACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| 3UTR-3UTR CAA 90 bp | CGCTGGGGAGAATGGCTAGCCAAGAGAGGCTTCCAAAGGACGGCCCCGGAGCCTTTTTGCAAGGAGACCTaGAAAAGCCAGCTGGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: RWGEWLAKRGFQRTAPEPFCKET*KSQLVQ Trigger: CTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAA...AGGCTCCGGGGCCGTCCTTTGGAAGCCTCTCTTGGCTAGCCATTCTCCCCAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR GCA 72 bp | CACCAGAGTGGGAGGCAGCAAGCTGCAGGACTTCAATaGTTGAGATGTCCCAGGACAGGGTGGAATCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: HQSGRQQAAGLQ*LRCPRTGWNPG Trigger: CCCTGGATTCCACCCTGTCCTGGGACATCTCAAGCATTGAAGTCCTGCAGCTTGCTGCCTCCCACTCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR GCA 72 bp | AGGCACCAAGAGGAAGTCCTCAAGGCCAGGCCCTTTTaGAAGGAGACCTTGAAAAGCCAGCTGGTCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RHQEEVLKARPF*KETLKSQLVQE Trigger: CTCCTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACTTCCTCTTGGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCAAGAAACAGCAGGCCAAGCTCCAGGACCCACCGAGTGCAACAAGACTGCATTTTGCAAGGAGACCTaGAAAAGCCAGCTGGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: GQETAGQAPGPTECNKTAFCKET*KSQLVQ Trigger: CTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAA...TGCAGTCTTGTTGCACTCGGTGGGTCCTGGAGCTTGGCCTGCTGTTTCTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR TCA 72 bp | AAGTCCTCAAGGCCAGGCCCTTTTGCAAGGAGACCTTaGAAAGCCAGCTGGTCCAGGAGACTAGACACCAGA | + |
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Preference number: 3 (lower is better) Translates to: KSSRPGPFARRP*KASWSRRLDTR Trigger: TCTGGTGTCTAGTCTCCTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR GCA 72 bp | CTCCCAAATGCTGGGATTAAAGGCATTCACCACCACTaGCCGGCCTCAAAGAGGGCCTTTGATTGCTGGACT | + |
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Preference number: 3 (lower is better) Translates to: LPNAGIKGIHHH*PASKRAFDCWT Trigger: AGTCCAGCAATCAAAGGCCCTCTTTGAGGCCGGGCAGTGGTGGTGAATGCCTTTAATCCCAGCATTTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGCTAAGGAAAGTTCTGAGGTTTGTAATTAGGCCGGTGGTTCTGGGAGGGCAAGGCCAGGCCCTTTaGCAAGGAGACCTTGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: QQLRKVLRFVIRPVVLGGQGQAL*QGDLEK Trigger: CTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTG...CCCTCCCAGAACCACCGGCCTAATTACAAACCTCAGAACTTTCCTTAGCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| 3UTR-3UTR CAA 90 bp | GCAACAAGACTGCAACTTCCCCCACCCTTAAATCCCGTTGTTGTTGGAGCCCATCAGAAAGACCAGAGTTaGAAGGGAGAGGAGTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: ATRLQLPPPLNPVVVGAHQKDQS*KGEECH Trigger: GTGACACTCCTCTCCCTTCAAACTCTGGTCTTTCTG...ATGGGCTCCAACAACAACGGGATTTAAGGGTGGGGGAAGTTGCAGTCTTGTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR TCA 72 bp | TTTCCCCAGAGGTGGAGCCTGAGTCAGGGGCTCTTGTaGAAGTTGTTTATTAAGAGGGCTCTTTGGAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: FPQRWSLSQGLL*KLFIKRALWRK Trigger: CTTTCTCCAAAGAGCCCTCTTAATAAACAACTTTCACAAGAGCCCCTGACTCAGGCTCCACCTCTGGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| 3UTR-3UTR CAA 90 bp | ATGAGACAAAGTACTGGAACATCTATCATCCTGGTCTCAGGAGAAATGTGGGCTCAAGGCCAGGCCCTTTaGCAAGGAGACCTTGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: MRQSTGTSIILVSGEMWAQGQAL*QGDLEK Trigger: CTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTG...AGCCCACATTTCTCCTGAGACCAGGATGATAGATGTTCCAGTACTTTGTCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR TCA 72 bp | GGAGAAAGTTTCCAGAGAAAGAAACCAGGCCTGGGATaGGACAAAGTACTGGAACATCTATCATCCTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GESFQRKKPGLG*DKVLEHLSSWS Trigger: AGACCAGGATGATAGATGTTCCAGTACTTTGTCTCATCCCAGGCCTGGTTTCTTTCTCTGGAAACTTTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR CCA 72 bp | AGAGAAAGAAACCAGGCCTGGGATGAGACAAAGTACTaGAACATCTATCATCCTGGTCTCAGGAGAAATGTG | + |
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Preference number: 3 (lower is better) Translates to: RERNQAWDETKY*NIYHPGLRRNV Trigger: CACATTTCTCCTGAGACCAGGATGATAGATGTTCCAGTACTTTGTCTCATCCCAGGCCTGGTTTCTTTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR CCA 72 bp | TCTTTGGAGAAAGTTTCCAGAGAAAGAAACCAGGCCTaGGATGAGACAAAGTACTGGAACATCTATCATCCT | + |
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Preference number: 3 (lower is better) Translates to: SLEKVSRERNQA*DETKYWNIYHP Trigger: AGGATGATAGATGTTCCAGTACTTTGTCTCATCCCAGGCCTGGTTTCTTTCTCTGGAAACTTTCTCCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR TCA 90 bp | CGCTGGGGAGAATGGCTAGCCAAGAGAGGCTTCCAAAGGACGGCCCCGGAGCCTCGTAGGGCCAGTAGCTaGAGAAGGCTTTCTTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RWGEWLAKRGFQRTAPEPRRASS*RRLSSP Trigger: CGGGGAAGAAAGCCTTCTTCAGCTACTGGCCCTACG...AGGCTCCGGGGCCGTCCTTTGGAAGCCTCTCTTGGCTAGCCATTCTCCCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR CCA 90 bp | CGCTGGGGAGAATGGCTAGCCAAGAGAGGCTTCCAAAGGACGGCCCCGGAGCCTTTCAGGAGCCCTCCCTaGGTTGCAGTTATACCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RWGEWLAKRGFQRTAPEPFRSPP*VAVIPA Trigger: GGCCGGTATAACTGCAACCCAGGGAGGGCTCCTGAA...AGGCTCCGGGGCCGTCCTTTGGAAGCCTCTCTTGGCTAGCCATTCTCCCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| CDS-3UTR GCA 90 bp | TGGGCTGTGATGCCACCCAGACAGTCCAGCCCAATGATGTCCTTAGCGCTGGGGGTGGCATCTTTGGGTTaGCCTTTGCCACCAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: WAVMPPRQSSPMMSLALGVASLG*PLPPSP Trigger: TGGACTTGGTGGCAAAGGGCAACCCAAAGATGCCAC...CCCCAGCGCTAAGGACATCATTGGGCTGGACTGTCTGGGTGGCATCACAGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR TCA 90 bp | AGTCCTCAAGGCCAGGCCCTTTTGCAAGGAGACCTTGAAAAGCCAGCTGGTCCACGTAGGGCCAGTAGCTaGAGAAGGCTTTCTTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SPQGQALLQGDLEKPAGPRRASS*RRLSSP Trigger: CGGGGAAGAAAGCCTTCTTCAGCTACTGGCCCTACG...TGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR CAA 72 bp | GAAGTCCTCAAGGCCAGGCCCTTTTGCAAGGAGACCTaGAAAAGCCAGCTGGTCCAGGAGACTAGACACCAG | + |
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Preference number: 4 (lower is better) Translates to: EVLKARPFCKET*KSQLVQETRHQ Trigger: CTGGTGTCTAGTCTCCTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR CAA 72 bp | AAGGCACCAAGAGGAAGTCCTCAAGGCCAGGCCCTTTaGCAAGGAGACCTTGAAAAGCCAGCTGGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KAPRGSPQGQAL*QGDLEKPAGPG Trigger: TCCTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACTTCCTCTTGGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR GCA 90 bp | CCGGAGCCTGAGCTATTATGCAGCAAGAGATCCCAGCGAAAGCACAACGGGCAAGTGGCATCTTTGGGTTaGCCTTTGCCACCAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PEPELLCSKRSQRKHNGQVASLG*PLPPSP Trigger: TGGACTTGGTGGCAAAGGGCAACCCAAAGATGCCAC...TTGCCCGTTGTGCTTTCGCTGGGATCTCTTGCTGCATAATAGCTCAGGCTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR GCA 90 bp | CCTCAAGGCCAGGCCCTTTTGCAAGGAGACCTTGAAAAGCCAGCTGGTCCAGGATGTCTGTCAGGCTCTTaGATCCATCGATCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PQGQALLQGDLEKPAGPGCLSGS*IHRSSG Trigger: ACCTGAAGATCGATGGATGCAAGAGCCTGACAGACA...TCCTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR CCA 90 bp | CACCAGAGGGTACCACTGAATCTGAAATGGGGCAGGGCTGAACCTAGAGGTCTCAGTCTGTGGCATCTTTaGGTTGCCCTTTGCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: HQRVPLNLKWGRAEPRGLSLWHL*VALCHQ Trigger: TTGGTGGCAAAGGGCAACCCAAAGATGCCACAGACT...GAGACCTCTAGGTTCAGCCCTGCCCCATTTCAGATTCAGTGGTACCCTCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR CAA 72 bp | GCATTCACCACCACTGCCCGGCCTCAAAGAGGGCCTTaGATTGCTGGACTTCAATACTTTGATAGGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: AFTTTARPQRGP*IAGLQYFDRGP Trigger: AGGTCCCCTATCAAAGTATTGAAGTCCAGCAATCAAAGGCCCTCTTTGAGGCCGGGCAGTGGTGGTGAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| CDS-3UTR GCA 90 bp | GGAAGTCCTCAAGGCCAGGCCCTTTTGCAAGGAGACCTTGAAAAGCCAGCTGGTTGTCTGTCAGGCTCTTaGATCCATCGATCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GSPQGQALLQGDLEKPAGCLSGS*IHRSSG Trigger: ACCTGAAGATCGATGGATGCAAGAGCCTGACAGACA...ACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR TCA 90 bp | GCAACAAGACTGCAACTTCCCCCACCCTTAAATCCCGTTGTTGTTGGAGCCCATCAACAATCATGCTTCTaGCAGCACCAGTCTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: ATRLQLPPPLNPVVVGAHQQSCF*QHQSVA Trigger: TGCCACAGACTGGTGCTGTCAGAAGCATGATTGTTG...ATGGGCTCCAACAACAACGGGATTTAAGGGTGGGGGAAGTTGCAGTCTTGTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| 3UTR CAA 72 bp | CCAATAGCTGCAGGGATGAAGGTAGGCTGGGTCAGTTaGAGCCAGAAAGGATACTCAGCAAAGCTATCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PIAAGMKVGWVS*SQKGYSAKLSL Trigger: GAGGGATAGCTTTGCTGAGTATCCTTTCTGGCTCAAACTGACCCAGCCTACCTTCATCCCTGCAGCTATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| CDS CCA 90 bp | CCCGTCATGTGTGTGACCATCTTGTTCAGGTTCAGGAGCCCTCCCTaGGTTGCAGTTATACCGGCCAGCAGCAGCCCACACAGCAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PVMCVTILFRFRSPP*VAVIPASSSPHSRA Trigger: CGCCCTGCTGTGTGGGCTGCTGCTGGCCGGTATAACTGCAACCCAGGGAGGGCTCCTGAACCTGAACAAGATGGTCACACACATGACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| CDS GCA 90 bp | CATGTGTGTGACCATCTTGTTCAGGTTCAGGAGCCCTCCCTGGGTTaGAGTTATACCGGCCAGCAGCAGCCCACACAGCAGGGCGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: HVCDHLVQVQEPSLG*SYTGQQQPTQQGES Trigger: AGACTCGCCCTGCTGTGTGGGCTGCTGCTGGCCGGTATAACTGCAACCCAGGGAGGGCTCCTGAACCTGAACAAGATGGTCACACACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| CDS-3UTR CAA 90 bp | CGCTGGGGAGAATGGCTAGCCAAGAGAGGCTTCCAAAGGACGGCCCCGGAGCCTGTAGCTATCCAGGTTTaGCTTCAAGCACAAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RWGEWLAKRGFQRTAPEPVAIQV*LQAQGH Trigger: GTGGCCTTGTGCTTGAAGCAAAACCTGGATAGCTAC...AGGCTCCGGGGCCGTCCTTTGGAAGCCTCTCTTGGCTAGCCATTCTCCCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR CAA 90 bp | CCTCAAGGCCAGGCCCTTTTGCAAGGAGACCTTGAAAAGCCAGCTGGTCCAGGACACAAGGCCACCTCCTaGTCACAAGCACACAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: PQGQALLQGDLEKPAGPGHKATS*SQAHSC Trigger: GCAACTGTGTGCTTGTGACAAGGAGGTGGCCTTGTG...TCCTGGACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR CAA 90 bp | CACCAGAGGGTACCACTGAATCTGAAATGGGGCAGGGCTGAACCTAGAGGTCTCCACAAGGCCACCTCCTaGTCACAAGCACACAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: HQRVPLNLKWGRAEPRGLHKATS*SQAHSC Trigger: GCAACTGTGTGCTTGTGACAAGGAGGTGGCCTTGTG...GAGACCTCTAGGTTCAGCCCTGCCCCATTTCAGATTCAGTGGTACCCTCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS CCA 90 bp | CATAGCAACAATCATGCTTCTGACAGCACCAGTCTGTGGCATCTTTaGGTTGCCCTTTGCCACCAAGTCCACAGTGACAGCCGTAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: HSNNHASDSTSLWHL*VALCHQVHSDSRRA Trigger: GGCCCTACGGCTGTCACTGTGGACTTGGTGGCAAAGGGCAACCCAAAGATGCCACAGACTGGTGCTGTCAGAAGCATGATTGTTGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS GCA 90 bp | TTTTGCTTCAAGCACAAGGCCACCTCCTTGTCACAAGCACACAGTTaGCTTTCACACCAGCTCCCGTTGTCAGAGCACTGGATAGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: FCFKHKATSLSQAHS*LSHQLPLSEHWIVP Trigger: GGGCACTATCCAGTGCTCTGACAACGGGAGCTGGTGTGAAAGGCAACTGTGTGCTTGTGACAAGGAGGTGGCCTTGTGCTTGAAGCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTCCTCAAGGCCAGGCCCTTTTGCAAGGAGACCTTGAAAAGCCAGCTGGTGTAGCTATCCAGGTTTaGCTTCAAGCACAAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: GSPQGQALLQGDLEKPAGVAIQV*LQAQGH Trigger: GTGGCCTTGTGCTTGAAGCAAAACCTGGATAGCTAC...ACCAGCTGGCTTTTCAAGGTCTCCTTGCAAAAGGGCCTGGCCTTGAGGACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS-3UTR CAA 90 bp | GTTGGAGCCCATAATGGGCTTGGTTCTAGGGGACTCCTGAATCAAGGTACCACCATGTGTGTGACCATCTaGTTCAGGTTCAGGAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: VGAHNGLGSRGLLNQGTTMCVTI*FRFRSP Trigger: AGGGCTCCTGAACCTGAACAAGATGGTCACACACAT...GGTGGTACCTTGATTCAGGAGTCCCCTAGAACCAAGCCCATTATGGGCTCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| CDS GCA 72 bp | GACCATCTTGTTCAGGTTCAGGAGCCCTCCCTGGGTTaGAGTTATACCGGCCAGCAGCAGCCCACACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: DHLVQVQEPSLG*SYTGQQQPTQQ Trigger: CTGCTGTGTGGGCTGCTGCTGGCCGGTATAACTGCAACCCAGGGAGGGCTCCTGAACCTGAACAAGATGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| CDS GCA 72 bp | GACAGCACCAGTCTGTGGCATCTTTGGGTTGCCCTTTaGCACCAAGTCCACAGTGACAGCCGTAGGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: DSTSLWHLWVAL*HQVHSDSRRAS Trigger: ACTGGCCCTACGGCTGTCACTGTGGACTTGGTGGCAAAGGGCAACCCAAAGATGCCACAGACTGGTGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS CCA 72 bp | TGTGTGACCATCTTGTTCAGGTTCAGGAGCCCTCCCTaGGTTGCAGTTATACCGGCCAGCAGCAGCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: CVTILFRFRSPP*VAVIPASSSPH Trigger: GTGTGGGCTGCTGCTGGCCGGTATAACTGCAACCCAGGGAGGGCTCCTGAACCTGAACAAGATGGTCACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| CDS GCA 72 bp | AAGCACAAGGCCACCTCCTTGTCACAAGCACACAGTTaGCTTTCACACCAGCTCCCGTTGTCAGAGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: KHKATSLSQAHS*LSHQLPLSEHW Trigger: CCAGTGCTCTGACAACGGGAGCTGGTGTGAAAGGCAACTGTGTGCTTGTGACAAGGAGGTGGCCTTGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS CAA 72 bp | TCACAAGCACACAGTTGCCTTTCACACCAGCTCCCGTaGTCAGAGCACTGGATAGTGCCCTGGGAGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: SQAHSCLSHQLP*SEHWIVPWEML Trigger: CAGCATCTCCCAGGGCACTATCCAGTGCTCTGACAACGGGAGCTGGTGTGAAAGGCAACTGTGTGCTTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS CAA 90 bp | GCAACAATCATGCTTCTGACAGCACCAGTCTGTGGCATCTTTGGGTaGCCCTTTGCCACCAAGTCCACAGTGACAGCCGTAGGGCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: ATIMLLTAPVCGIFG*PFATKSTVTAVGPV Trigger: TACTGGCCCTACGGCTGTCACTGTGGACTTGGTGGCAAAGGGCAACCCAAAGATGCCACAGACTGGTGCTGTCAGAAGCATGATTGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS CAA 72 bp | ATGCTTCTGACAGCACCAGTCTGTGGCATCTTTGGGTaGCCCTTTGCCACCAAGTCCACAGTGACAGCCGTA | + |
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Preference number: 6 (lower is better) Translates to: MLLTAPVCGIFG*PFATKSTVTAV Trigger: TACGGCTGTCACTGTGGACTTGGTGGCAAAGGGCAACCCAAAGATGCCACAGACTGGTGCTGTCAGAAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS CAA 90 bp | GGGCCGCCAGTAGTAACGCAGGCGCTTATTGTAGCTATCCAGGTTTaGCTTCAAGCACAAGGCCACCTCCTTGTCACAAGCACACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: GPPVVTQALIVAIQV*LQAQGHLLVTSTQL Trigger: CAACTGTGTGCTTGTGACAAGGAGGTGGCCTTGTGCTTGAAGCAAAACCTGGATAGCTACAATAAGCGCCTGCGTTACTACTGGCGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS CCA 72 bp | AATCATGCTTCTGACAGCACCAGTCTGTGGCATCTTTaGGTTGCCCTTTGCCACCAAGTCCACAGTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: NHASDSTSLWHL*VALCHQVHSDS Trigger: GCTGTCACTGTGGACTTGGTGGCAAAGGGCAACCCAAAGATGCCACAGACTGGTGCTGTCAGAAGCATGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS CAA 72 bp | AAGAAGGCTTTCTTCCCCGTCATGTGTGTGACCATCTaGTTCAGGTTCAGGAGCCCTCCCTGGGTTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: KKAFFPVMCVTI*FRFRSPPWVAV Trigger: AACTGCAACCCAGGGAGGGCTCCTGAACCTGAACAAGATGGTCACACACATGACGGGGAAGAAAGCCTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030528.9 |
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| CDS CAA 72 bp | CTATCCAGGTTTTGCTTCAAGCACAAGGCCACCTCCTaGTCACAAGCACACAGTTGCCTTTCACACCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LSRFCFKHKATS*SQAHSCLSHQL Trigger: GAGCTGGTGTGAAAGGCAACTGTGTGCTTGTGACAAGGAGGTGGCCTTGTGCTTGAAGCAAAACCTGGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS CAA 72 bp | GTAGTAACGCAGGCGCTTATTGTAGCTATCCAGGTTTaGCTTCAAGCACAAGGCCACCTCCTTGTCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: VVTQALIVAIQV*LQAQGHLLVTS Trigger: GCTTGTGACAAGGAGGTGGCCTTGTGCTTGAAGCAAAACCTGGATAGCTACAATAAGCGCCTGCGTTACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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| CDS GCA 72 bp | GGGAGATGCTGTATTTGTAGTTGTCTGTCAGGCTCTTaGATCCATCGATCTTCAGGTGGGCATAGCAACAAT | + |
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Preference number: 6 (lower is better) Translates to: GRCCICSCLSGS*IHRSSGGHSNN Trigger: ATTGTTGCTATGCCCACCTGAAGATCGATGGATGCAAGAGCCTGACAGACAACTACAAATACAGCATCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030528.9 ENSMUST00000105806.2 |
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