Pregenerated sensors for PLA2G2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028750Ensembl transcript IDs: ENSMUST00000030530.6, ENSMUST00000105808.8, ENSMUST00000124660.7
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCTGCAGCTCAGCCTGGGTTCGGCTGGGCTCTTTCATGCTTGGTaGGTCTCCGAGCCCAGGGATCTGCTGCTGCTGTTCACCCAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: VLQLSLGSAGLFHAW*VSEPRDLLLLFTQQ Trigger: TTGCTGGGTGAACAGCAGCAGCAGATCCCTGGGCTCGGAGACTCACCAAGCATGAAAGAGCCCAGCCGAACCCAGGCTGAGCTGCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 90 bp | AGGGCCCTGCCTCCCAGGCCCTCCGATGACCCTCTTGTCTCCATGTaGTTGGCTTTCTCAGTCTGGGGTTTAGCCTCTGGCACTGGTAGA | + |
|
Preference number: 1 (lower is better) Translates to: RALPPRPSDDPLVSM*LAFSVWGLASGTGR Trigger: TCTACCAGTGCCAGAGGCTAAACCCCAGACTGAGAAAGCCAAGCACATGGAGACAAGAGGGTCATCGGAGGGCCTGGGAGGCAGGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 90 bp | TTTGAGCTGGGTAGAGCTCAGGGCCCTGCCTCCCAGGCCCTCCGATaGCCCTCTTGTCTCCATGTGCTTGGCTTTCTCAGTCTGGGGTTT | + |
|
Preference number: 1 (lower is better) Translates to: FELGRAQGPASQALR*PSCLHVLGFLSLGF Trigger: AAACCCCAGACTGAGAAAGCCAAGCACATGGAGACAAGAGGGTCATCGGAGGGCCTGGGAGGCAGGGCCCTGAGCTCTACCCAGCTCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CCA 90 bp | AGCTTCCTGTCTGAGACCCATGGTTCTGTGTGCTGCAGCTCAGCCTaGGTTCGGCTGGGCTCTTTCATGCTTGGTGAGTCTCCGAGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: SFLSETHGSVCCSSA*VRLGSFMLGESPSP Trigger: TGGGCTCGGAGACTCACCAAGCATGAAAGAGCCCAGCCGAACCCAGGCTGAGCTGCAGCACACAGAACCATGGGTCTCAGACAGGAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 90 bp | TCAGATGTGCTGAGTGCGCTAGGGCAAGAAAGGCAAGTGTCATCATaGAGAGAGGCAAGCATGGTCACACCACCACTCCAGCCTGGCACC | + |
|
Preference number: 1 (lower is better) Translates to: SDVLSALGQERQVSS*REASMVTPPLQPGT Trigger: GGTGCCAGGCTGGAGTGGTGGTGTGACCATGCTTGCCTCTCTGCATGATGACACTTGCCTTTCTTGCCCTAGCGCACTCAGCACATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CCA 90 bp | TCTACTTGCTCTACATGGATAGGCTGGGGAAGAAAGATGACTGTGTaGTTTGAGCTGGGTAGAGCTCAGGGCCCTGCCTCCCAGGCCCTC | + |
|
Preference number: 1 (lower is better) Translates to: STCSTWIGWGRKMTV*FELGRAQGPASQAL Trigger: GAGGGCCTGGGAGGCAGGGCCCTGAGCTCTACCCAGCTCAAACCACACAGTCATCTTTCTTCCCCAGCCTATCCATGTAGAGCAAGTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 90 bp | TCACAAAAACGCAGCTTCCTGTCTGAGACCCATGGTTCTGTGTGCTaGAGCTCAGCCTGGGTTCGGCTGGGCTCTTTCATGCTTGGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: SQKRSFLSETHGSVC*SSAWVRLGSFMLGE Trigger: CTCACCAAGCATGAAAGAGCCCAGCCGAACCCAGGCTGAGCTGCAGCACACAGAACCATGGGTCTCAGACAGGAAGCTGCGTTTTTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 90 bp | GCATCACAAAAACGCAGCTTCCTGTCTGAGACCCATGGTTCTGTGTaGTGCAGCTCAGCCTGGGTTCGGCTGGGCTCTTTCATGCTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: ASQKRSFLSETHGSV*CSSAWVRLGSFMLG Trigger: ACCAAGCATGAAAGAGCCCAGCCGAACCCAGGCTGAGCTGCAGCACACAGAACCATGGGTCTCAGACAGGAAGCTGCGTTTTTGTGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 90 bp | AGCTGGGCTCTCGGTGTTCTCCCTGGAACTCAAACTTCCCAGACTTaGGGTCTGTGTGTGTTTCTTTACATCTCTGAATCTCTGCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: SWALGVLPGTQTSQT*GLCVFLYISESLQL Trigger: GAGCTGCAGAGATTCAGAGATGTAAAGAAACACACACAGACCTCAAGTCTGGGAAGTTTGAGTTCCAGGGAGAACACCGAGAGCCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 90 bp | CCCAGACTTGAGGTCTGTGTGTGTTTCTTTACATCTCTGAATCTCTaGAGCTCAGCTCTGCATGAGGCACACAGTGTGGGCTCAATACAC | + |
|
Preference number: 1 (lower is better) Translates to: PRLEVCVCFFTSLNL*SSALHEAHSVGSIH Trigger: GTGTATTGAGCCCACACTGTGTGCCTCATGCAGAGCTGAGCTGCAGAGATTCAGAGATGTAAAGAAACACACACAGACCTCAAGTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 90 bp | TGTGTGTTTCTTTACATCTCTGAATCTCTGCAGCTCAGCTCTGCATaGGGCACACAGTGTGGGCTCAATACACAGATGTTGGCTGACCCA | + |
|
Preference number: 1 (lower is better) Translates to: CVFLYISESLQLSSA*GTQCGLNTQMLADP Trigger: TGGGTCAGCCAACATCTGTGTATTGAGCCCACACTGTGTGCCTCATGCAGAGCTGAGCTGCAGAGATTCAGAGATGTAAAGAAACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 90 bp | TCAAACTTCCCAGACTTGAGGTCTGTGTGTGTTTCTTTACATCTCTaGATCTCTGCAGCTCAGCTCTGCATGAGGCACACAGTGTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: SNFPDLRSVCVSLHL*ISAAQLCMRHTVWA Trigger: AGCCCACACTGTGTGCCTCATGCAGAGCTGAGCTGCAGAGATTCAGAGATGTAAAGAAACACACACAGACCTCAAGTCTGGGAAGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 90 bp | TTAACTTCCTTGCTTAACCTCTTATGTCAAAATATGACCAGTCAGTaGAACAGCCCAGCCTGCTGCCCCTCACTTTGTGTTCCCATCCTA | + |
|
Preference number: 1 (lower is better) Translates to: LTSLLNLLCQNMTSQ*NSPACCPSLCVPIL Trigger: TAGGATGGGAACACAAAGTGAGGGGCAGCAGGCTGGGCTGTTGCACTGACTGGTCATATTTTGACATAAGAGGTTAAGCAAGGAAGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCCCTGCCTCCCAGGCCCTCCGATGACCCTCTTGTCTCCATGTGCTTGGCTTACCCATGGTTCTGTGTaGTGCAGCTCAGCCTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GPCLPGPPMTLLSPCAWLTHGSV*CSSAWV Trigger: AACCCAGGCTGAGCTGCAGCACACAGAACCATGGGT...AAGCCAAGCACATGGAGACAAGAGGGTCATCGGAGGGCCTGGGAGGCAGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCCCTGCCTCCCAGGCCCTCCGATGACCCTCTTGTCTCCATGTGCTTGGCTTTCCAGGCGAGGCTCCTaGGCTGTGTTTTCTAGGATC | + |
|
Preference number: 2 (lower is better) Translates to: GPCLPGPPMTLLSPCAWLSRRGS*AVFSRI Trigger: GATCCTAGAAAACACAGCCCAGGAGCCTCGCCTGGA...AAGCCAAGCACATGGAGACAAGAGGGTCATCGGAGGGCCTGGGAGGCAGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CAA 90 bp | GCCCTGCCTCCCAGGCCCTCCGATGACCCTCTTGTCTCCATGTGCTaGGCTTTCTCAGTCTGGGGTTTAGCCTCTGGCACTGGTAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: ALPPRPSDDPLVSMC*AFSVWGLASGTGRS Trigger: GCTTCTACCAGTGCCAGAGGCTAAACCCCAGACTGAGAAAGCCAAGCACATGGAGACAAGAGGGTCATCGGAGGGCCTGGGAGGCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGCCTGACCTGGGTAGATGACTTGGTTCCCCAGTCAGACACACATCCTGACGCTGGGATTGCAGGATaGCCCCCATCCCTGCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PSLTWVDDLVPQSDTHPDAGIAG*PPSLLP Trigger: AGGGAGCAGGGATGGGGGGCATCCTGCAATCCCAGC...GTCAGGATGTGTGTCTGACTGGGGAACCAAGTCATCTACCCAGGTCAGGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGCATCCTGCATCCTGCTGGAGAGGTCAGACCTGGTGCAAATGAGGAGATTAGTGGAGGTTGCCCCTaGCCTCCTGCCTCTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GCILHPAGEVRPGANEEISGGCP*PPASPS Trigger: GGAAGGAGAGGCAGGAGGCCAGGGGCAACCTCCACT...AATCTCCTCATTTGCACCAGGTCTGACCTCTCCAGCAGGATGCAGGATGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCGCTAGGGCAAGAAAGGCAAGTGTCATCATGCAGAGAGGCAAGCATGGTCGCTGGGATTGCAGGATaGCCCCCATCCCTGCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SALGQERQVSSCREASMVAGIAG*PPSLLP Trigger: AGGGAGCAGGGATGGGGGGCATCCTGCAATCCCAGC...GACCATGCTTGCCTCTCTGCATGATGACACTTGCCTTTCTTGCCCTAGCGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTAGATGACTTGGTTCCCCAGTCAGACACACATCCTGACCAGGATAGAGGGAGTGGAGGTTGCCCCTaGCCTCCTGCCTCTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: WVDDLVPQSDTHPDQDRGSGGCP*PPASPS Trigger: GGAAGGAGAGGCAGGAGGCCAGGGGCAACCTCCACT...CCCTCTATCCTGGTCAGGATGTGTGTCTGACTGGGGAACCAAGTCATCTACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCCCTGCCTCCCAGGCCCTCCGATGACCCTCTTGTCTCCATGTGCTTGGCTTCAAACTTCCCAGACTTaGGGTCTGTGTGTGTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GPCLPGPPMTLLSPCAWLQTSQT*GLCVFL Trigger: AAGAAACACACACAGACCTCAAGTCTGGGAAGTTTG...AAGCCAAGCACATGGAGACAAGAGGGTCATCGGAGGGCCTGGGAGGCAGGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTCTCCATGTGCTTGGCTTTCTCAGTCTGGGGTTTAGCCTCTGGCACTGGTCAGCCATCGCAGGAATaGGATCCACCTTGCCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LVSMCLAFSVWGLASGTGQPSQE*DPPCQQ Trigger: CTGCTGGCAAGGTGGATCTCATTCCTGCGATGGCTG...ACCAGTGCCAGAGGCTAAACCCCAGACTGAGAAAGCCAAGCACATGGAGACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTGGTGGATGCAGGGGTCTTGACAACAGACCTGCCCTGAACCTCAGAGACAGGCAAGTGTCATCATaGAGAGAGGCAAGCATGGTC | + |
|
Preference number: 2 (lower is better) Translates to: PPGGCRGLDNRPALNLRDRQVSS*REASMV Trigger: GACCATGCTTGCCTCTCTGCATGATGACACTTGCCT...GTCTCTGAGGTTCAGGGCAGGTCTGTTGTCAAGACCCCTGCATCCACCAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTAGATGACTTGGTTCCCCAGTCAGACACACATCCTGACCAGGATAGAGGGCAGGGGAGTTTAGGCTaGATCCTGGGGCTCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: WVDDLVPQSDTHPDQDRGQGSLG*ILGLSA Trigger: AGCAGAGAGCCCCAGGATCCAGCCTAAACTCCCCTG...CCCTCTATCCTGGTCAGGATGTGTGTCTGACTGGGGAACCAAGTCATCTACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCATCCTGCATCCTGCTGGAGAGGTCAGACCTGGTGCAAATGAGGAGATTCCTTCCCAGCCTGACCTaGGTAGATGACTTGGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: GASCILLERSDLVQMRRFLPSLT*VDDLVP Trigger: GGGAACCAAGTCATCTACCCAGGTCAGGCTGGGAAG...GAATCTCCTCATTTGCACCAGGTCTGACCTCTCCAGCAGGATGCAGGATGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGACTTGAGGTCTGTGTGTGTTTCTTTACATCTCTGAATCTCTGCAGCTCACATGGTTCTGTGTGCTaGAGCTCAGCCTGGGTTCGG | + |
|
Preference number: 2 (lower is better) Translates to: PRLEVCVCFFTSLNLCSSHGSVC*SSAWVR Trigger: CCGAACCCAGGCTGAGCTGCAGCACACAGAACCATG...TGAGCTGCAGAGATTCAGAGATGTAAAGAAACACACACAGACCTCAAGTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTGCATCCTGCATCCTGCTGGAGAGGTCAGACCTGGTGCAAATGAGGAGATTGTCCTTGTTTCCTACTaGCAGACTGTATCTCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: GCILHPAGEVRPGANEEIVLVSY*QTVSLN Trigger: ATTAAGAGATACAGTCTGTCAGTAGGAAACAAGGAC...AATCTCCTCATTTGCACCAGGTCTGACCTCTCCAGCAGGATGCAGGATGCACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGCATCCTGCATCCTGCTGGAGAGGTCAGACCTGGTGCAAATGAGGAGATTCGTCCTTGTTTCCTACTaGCAGACTGTATCTCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: GASCILLERSDLVQMRRFVLVSY*QTVSLN Trigger: ATTAAGAGATACAGTCTGTCAGTAGGAAACAAGGAC...GAATCTCCTCATTTGCACCAGGTCTGACCTCTCCAGCAGGATGCAGGATGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGATCTGCTGCTGCTGTTCACCCAGCAAGTTCTGATGAGAATCCAAGAGGCTCTCAGATTCAAGGGATaGAACAGAGAATCTGCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: RDLLLLFTQQVLMRIQEALRFKG*NRESAL Trigger: AAGGGCAGATTCTCTGTTTCATCCCTTGAATCTGAG...AGCCTCTTGGATTCTCATCAGAACTTGCTGGGTGAACAGCAGCAGCAGATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CAA 90 bp | AAATATGACCAGTCAGTGCAACAGCCCAGCCTGCTGCCCCTCACTTaGTGTTCCCATCCTATAAAAATGTACCTCTCCCTTTGGGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: KYDQSVQQPSLLPLT*CSHPIKMYLSLWES Trigger: TGATTCCCAAAGGGAGAGGTACATTTTTATAGGATGGGAACACAAAGTGAGGGGCAGCAGGCTGGGCTGTTGCACTGACTGGTCATATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAATTAGACCTTCCTCGTTTACTAGAATTAAGTCTTACAGGACCAAAGGCTTCTGCCATCTTAACCAGTaGCATCTTTGTGGCACTGGT | + |
|
Preference number: 2 (lower is better) Translates to: PIRPSSFTRIKSYRTKGFCHLNQ*HLCGTG Trigger: ACCAGTGCCACAAAGATGTCACTGGTTAAGATGGCA...GAAGCCTTTGGTCCTGTAAGACTTAATTCTAGTAAACGAGGAAGGTCTAATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 72 bp | GCTGCAGCTCAGCCTGGGTTCGGCTGGGCTCTTTCATaGTTGGTGAGTCTCCGAGCCCAGGGATCTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AAAQPGFGWALS*LVSLRAQGSAA Trigger: AGCAGCAGATCCCTGGGCTCGGAGACTCACCAAGCATGAAAGAGCCCAGCCGAACCCAGGCTGAGCTGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | CTCAGCCTGGGTTCGGCTGGGCTCTTTCATGCTTGGTaGGTCTCCGAGCCCAGGGATCTGCTGCTGCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSLGSAGLFHAW*VSEPRDLLLLF Trigger: GAACAGCAGCAGCAGATCCCTGGGCTCGGAGACTCACCAAGCATGAAAGAGCCCAGCCGAACCCAGGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 72 bp | ATCCAAGAGGCTGAGCCCAGGCTTCCTCCTGGTGGATaGAGGGGTCTTGACAACAGACCTGCCCTGAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: IQEAEPRLPPGG*RGLDNRPALNL Trigger: GAGGTTCAGGGCAGGTCTGTTGTCAAGACCCCTGCATCCACCAGGAGGAAGCCTGGGCTCAGCCTCTTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 72 bp | CCTCCCAGGCCCTCCGATGACCCTCTTGTCTCCATGTaGTTGGCTTTCTCAGTCTGGGGTTTAGCCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PPRPSDDPLVSM*LAFSVWGLASG Trigger: GCCAGAGGCTAAACCCCAGACTGAGAAAGCCAAGCACATGGAGACAAGAGGGTCATCGGAGGGCCTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CCA 72 bp | ATGGTTCTGTGTGCTGCAGCTCAGCCTGGGTTCGGCTaGGCTCTTTCATGCTTGGTGAGTCTCCGAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: MVLCAAAQPGFG*ALSCLVSLRAQ Trigger: CTGGGCTCGGAGACTCACCAAGCATGAAAGAGCCCAGCCGAACCCAGGCTGAGCTGCAGCACACAGAACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | CCTGCATCCTGCTGGAGAGGTCAGACCTGGTGCAAATaGGGAGATTCCAGGCGAGGCTCCTGGGCTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PASCWRGQTWCK*GDSRRGSWAVF Trigger: AAACACAGCCCAGGAGCCTCGCCTGGAATCTCCTCATTTGCACCAGGTCTGACCTCTCCAGCAGGATGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR GCA 72 bp | AAACGCAGCTTCCTGTCTGAGACCCATGGTTCTGTGTaGTGCAGCTCAGCCTGGGTTCGGCTGGGCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KRSFLSETHGSV*CSSAWVRLGSF Trigger: GAAAGAGCCCAGCCGAACCCAGGCTGAGCTGCAGCACACAGAACCATGGGTCTCAGACAGGAAGCTGCGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | GTTCACCCAGCAAGTTCTGATGAGAATCCAAGAGGCTaGGCCCAGGCTTCCTCCTGGTGGATGCAGGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VHPASSDENPRG*AQASSWWMQGS Trigger: AGACCCCTGCATCCACCAGGAGGAAGCCTGGGCTCAGCCTCTTGGATTCTCATCAGAACTTGCTGGGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CCA 72 bp | TCTGAGACCCATGGTTCTGTGTGCTGCAGCTCAGCCTaGGTTCGGCTGGGCTCTTTCATGCTTGGTGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SETHGSVCCSSA*VRLGSFMLGES Trigger: AGACTCACCAAGCATGAAAGAGCCCAGCCGAACCCAGGCTGAGCTGCAGCACACAGAACCATGGGTCTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR GCA 72 bp | CTGAGTGCGCTAGGGCAAGAAAGGCAAGTGTCATCATaGAGAGAGGCAAGCATGGTCACACCACCACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSALGQERQVSS*REASMVTPPLQ Trigger: CTGGAGTGGTGGTGTGACCATGCTTGCCTCTCTGCATGATGACACTTGCCTTTCTTGCCCTAGCGCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CCA 72 bp | CAGAGAGGCAAGCATGGTCACACCACCACTCCAGCCTaGCACCATCAACTTCAGACACCAGCCCAATTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QRGKHGHTTTPA*HHQLQTPAQLD Trigger: GTCTAATTGGGCTGGTGTCTGAAGTTGATGGTGCCAGGCTGGAGTGGTGGTGTGACCATGCTTGCCTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CCA 72 bp | GACCCTCTTGTCTCCATGTGCTTGGCTTTCTCAGTCTaGGGTTTAGCCTCTGGCACTGGTAGAAGCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DPLVSMCLAFSV*GLASGTGRSWA Trigger: AGCCCAGCTTCTACCAGTGCCAGAGGCTAAACCCCAGACTGAGAAAGCCAAGCACATGGAGACAAGAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CCA 72 bp | TCTACATGGATAGGCTGGGGAAGAAAGATGACTGTGTaGTTTGAGCTGGGTAGAGCTCAGGGCCCTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: STWIGWGRKMTV*FELGRAQGPAS Trigger: GGAGGCAGGGCCCTGAGCTCTACCCAGCTCAAACCACACAGTCATCTTTCTTCCCCAGCCTATCCATGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | CTGGTGGATGCAGGGGTCTTGACAACAGACCTGCCCTaGACCTCAGAGACTGAAGTTTGCACATTAGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LVDAGVLTTDLP*TSETEVCTLDL Trigger: GAGGTCTAATGTGCAAACTTCAGTCTCTGAGGTTCAGGGCAGGTCTGTTGTCAAGACCCCTGCATCCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | ATGTACCTCTCCCTTTGGGAATCACGGTTCAGATCCTaGACGGGTGCTGAGCGCTCAGAAAACAAAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: MYLSLWESRFRS*TGAERSENKAS Trigger: GGAGGCTTTGTTTTCTGAGCGCTCAGCACCCGTTCAGGATCTGAACCGTGATTCCCAAAGGGAGAGGTACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | CCATGTTCTCCAAGTCTGGCCCAAGAGCTGAGAACCTaGCAGTGTCAGGGAATAAAGACCAGCACTGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PCSPSLAQELRT*QCQGIKTSTVS Trigger: GCTGACAGTGCTGGTCTTTATTCCCTGACACTGTCAGGTTCTCAGCTCTTGGGCCAGACTTGGAGAACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CCA 72 bp | AAGAAAGGCAAGTGTCATCATGCAGAGAGGCAAGCATaGTCACACCACCACTCCAGCCTGGCACCATCAACT | + |
|
Preference number: 3 (lower is better) Translates to: KKGKCHHAERQA*SHHHSSLAPST Trigger: AGTTGATGGTGCCAGGCTGGAGTGGTGGTGTGACCATGCTTGCCTCTCTGCATGATGACACTTGCCTTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | CCCCCATCCCTGCTCCCTTATGTCCTTGTTTCCTACTaGCAGACTGTATCTCTTAATGGCCAGATACCCACG | + |
|
Preference number: 3 (lower is better) Translates to: PPSLLPYVLVSY*QTVSLNGQIPT Trigger: CGTGGGTATCTGGCCATTAAGAGATACAGTCTGTCAGTAGGAAACAAGGACATAAGGGAGCAGGGATGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR GCA 72 bp | GAGGTCTGTGTGTGTTTCTTTACATCTCTGAATCTCTaGAGCTCAGCTCTGCATGAGGCACACAGTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: EVCVCFFTSLNL*SSALHEAHSVG Trigger: GCCCACACTGTGTGCCTCATGCAGAGCTGAGCTGCAGAGATTCAGAGATGTAAAGAAACACACACAGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | AGGGCAGGAATTCTCCACCTCCAGTCCCTTAATGACTaGAAAGACACTCCCCAGACAGCAAAGCTCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RAGILHLQSLND*KDTPQTAKLFR Trigger: TCTGAAGAGCTTTGCTGTCTGGGGAGTGTCTTTTCAGTCATTAAGGGACTGGAGGTGGAGAATTCCTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | GGTCTTGACAACAGACCTGCCCTGAACCTCAGAGACTaGAGTTTGCACATTAGACCTCCATCCGCTTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GLDNRPALNLRD*SLHIRPPSAFA Trigger: AGCAAAAGCGGATGGAGGTCTAATGTGCAAACTTCAGTCTCTGAGGTTCAGGGCAGGTCTGTTGTCAAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | CCAGACTTGAGGTCTGTGTGTGTTTCTTTACATCTCTaGATCTCTGCAGCTCAGCTCTGCATGAGGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: PDLRSVCVSLHL*ISAAQLCMRHT Trigger: TGTGTGCCTCATGCAGAGCTGAGCTGCAGAGATTCAGAGATGTAAAGAAACACACACAGACCTCAAGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | AAACAAAGCCTCCATTTTAAGCTTCTGTATCTGAAGTaGGTGTTCTCGGCTTCCGCTCTGAAGCCAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KQSLHFKLLYLK*VFSASALKPRA Trigger: AGCTCTTGGCTTCAGAGCGGAAGCCGAGAACACTCACTTCAGATACAGAAGCTTAAAATGGAGGCTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR TCA 72 bp | TGCTACATTATCGAGCAGAATCTCAGATTCAAGGGATaGAACAGAGAATCTGCCCTTTTCAGATGTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CYIIEQNLRFKG*NRESALFRCAE Trigger: CTCAGCACATCTGAAAAGGGCAGATTCTCTGTTTCATCCCTTGAATCTGAGATTCTGCTCGATAATGTAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CAA 72 bp | GCAGCTCAGCCTGGGTTCGGCTGGGCTCTTTCATGCTaGGTGAGTCTCCGAGCCCAGGGATCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAQPGFGWALSC*VSLRAQGSAAA Trigger: AGCAGCAGCAGATCCCTGGGCTCGGAGACTCACCAAGCATGAAAGAGCCCAGCCGAACCCAGGCTGAGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGTTCGGCTGGGCTCTTTCATGCTTGGTGAGTCTCCGAGCCCAGGGATCAGCAGCACCTGTCTGTaGCATCCACAGGGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AWVRLGSFMLGESPSPGISSTCL*HPQGAL Trigger: AAGGGCTCCCTGTGGATGCCACAGACAGGTGCTGCT...GATCCCTGGGCTCGGAGACTCACCAAGCATGAAAGAGCCCAGCCGAACCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCACTTCCCAGCCTGACCTGGGTAGATGACTTGGTTCCCCAGTCAGACACACCACAGGGAGCCCTTTaGCCCCAAGCCCACAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLPSLTWVDDLVPQSDTPQGAL*PQAHSS Trigger: GCTACTGTGGGCTTGGGGGCAAAGGGCTCCCTGTGG...TGTGTCTGACTGGGGAACCAAGTCATCTACCCAGGTCAGGCTGGGAAGTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR GCA 90 bp | GCATCCTGCATCCTGCTGGAGAGGTCAGACCTGGTGCAAATGAGGAGATTCCAGCCACAGGGAGCCCTTTaGCCCCAAGCCCACAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASCILLERSDLVQMRRFQPQGAL*PQAHSS Trigger: GCTACTGTGGGCTTGGGGGCAAAGGGCTCCCTGTGG...CTGGAATCTCCTCATTTGCACCAGGTCTGACCTCTCCAGCAGGATGCAGGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR CAA 72 bp | CCCGGCTCACTTCCCAGCCTGACCTGGGTAGATGACTaGGTTCCCCAGTCAGACACACATCCTGACCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGSLPSLTWVDD*VPQSDTHPDQD Trigger: ATCCTGGTCAGGATGTGTGTCTGACTGGGGAACCAAGTCATCTACCCAGGTCAGGCTGGGAAGTGAGCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| 3UTR CAA 72 bp | CCCAGGCCCTCCGATGACCCTCTTGTCTCCATGTGCTaGGCTTTCTCAGTCTGGGGTTTAGCCTCTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PRPSDDPLVSMC*AFSVWGLASGT Trigger: AGTGCCAGAGGCTAAACCCCAGACTGAGAAAGCCAAGCACATGGAGACAAGAGGGTCATCGGAGGGCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCACTTCCCAGCCTGACCTGGGTAGATGACTTGGTTCCCCAGTCAGACACAACTGCCAGAAACTGCTaGGGGTGGAGGTTGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLPSLTWVDDLVPQSDTTARNC*GWRLSS Trigger: ACTGGACAACCTCCACCCTCAGCAGTTTCTGGCAGT...TGTGTCTGACTGGGGAACCAAGTCATCTACCCAGGTCAGGCTGGGAAGTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTTAATGGCCAGATACCCACGGTTTGTTTCCAGGGCAGGAATTCTCCACCTCACTCACAGGCCTTCTaGCCGCAGAGGCAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLNGQIPTVCFQGRNSPPHSQAF*PQRQLL Trigger: CAGCAGCTGCCTCTGCGGGCAGAAGGCCTGTGAGTG...AGGTGGAGAATTCCTGCCCTGGAAACAAACCGTGGGTATCTGGCCATTAAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGCATCCTGCATCCTGCTGGAGAGGTCAGACCTGGTGCAAATGAGGAGATTACCATCCTCTGGAACTaGCAGAAACTGCTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCILHPAGEVRPGANEEITILWN*QKLLRV Trigger: CACCCTCAGCAGTTTCTGGCAGTTCCAGAGGATGGT...AATCTCCTCATTTGCACCAGGTCTGACCTCTCCAGCAGGATGCAGGATGCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTAATGGCCAGATACCCACGGTTTGTTTCCAGGGCAGGAATTCTCCACCTAGCAGCACCTGTCTGTaGCATCCACAGGGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLNGQIPTVCFQGRNSPPSSTCL*HPQGAL Trigger: AAGGGCTCCCTGTGGATGCCACAGACAGGTGCTGCT...AGGTGGAGAATTCCTGCCCTGGAAACAAACCGTGGGTATCTGGCCATTAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGCATCCTGCATCCTGCTGGAGAGGTCAGACCTGGTGCAAATGAGGAGATTTGTTTGACCATCCTCTaGAACTGCCAGAAACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCILHPAGEVRPGANEEICLTIL*NCQKLL Trigger: CAGCAGTTTCTGGCAGTTCCAGAGGATGGTCAAACA...AATCTCCTCATTTGCACCAGGTCTGACCTCTCCAGCAGGATGCAGGATGCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCTCCACCTCCAGTCCCTTAATGACTGAAAAGACACTCCCCAGACAGCAAACTGCCAGAAACTGCTaGGGGTGGAGGTTGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EFSTSSPLMTEKTLPRQQTARNC*GWRLSS Trigger: ACTGGACAACCTCCACCCTCAGCAGTTTCTGGCAGT...TTGCTGTCTGGGGAGTGTCTTTTCAGTCATTAAGGGACTGGAGGTGGAGAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCGCTAGGGCAAGAAAGGCAAGTGTCATCATGCAGAGAGGCAAGCATGGTCTGTTTGACCATCCTCTaGAACTGCCAGAAACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SALGQERQVSSCREASMVCLTIL*NCQKLL Trigger: CAGCAGTTTCTGGCAGTTCCAGAGGATGGTCAAACA...GACCATGCTTGCCTCTCTGCATGATGACACTTGCCTTTCTTGCCCTAGCGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| 3UTR CAA 72 bp | CAGTCAGTGCAACAGCCCAGCCTGCTGCCCCTCACTTaGTGTTCCCATCCTATAAAAATGTACCTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSVQQPSLLPLT*CSHPIKMYLSL Trigger: AAGGGAGAGGTACATTTTTATAGGATGGGAACACAAAGTGAGGGGCAGCAGGCTGGGCTGTTGCACTGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105808.8 |
||
| CDS-3UTR GCA 90 bp | GAATTCTCCACCTCCAGTCCCTTAATGACTGAAAAGACACTCCCCAGACAGCAAACCATCCTCTGGAACTaGCAGAAACTGCTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EFSTSSPLMTEKTLPRQQTILWN*QKLLRV Trigger: CACCCTCAGCAGTTTCTGGCAGTTCCAGAGGATGGT...TTGCTGTCTGGGGAGTGTCTTTTCAGTCATTAAGGGACTGGAGGTGGAGAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGATGACTTGGTTCCCCAGTCAGACACACATCCTGACCAGGATAGAGGGTTGTCCAGTAGAAGATaGAGACAAGGAAGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WVDDLVPQSDTHPDQDRGLSSRR*RQGRWQ Trigger: TTGCCATCTTCCTTGTCTTCATCTTCTACTGGACAA...CCCTCTATCCTGGTCAGGATGTGTGTCTGACTGGGGAACCAAGTCATCTACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTAATGGCCAGATACCCACGGTTTGTTTCCAGGGCAGGAATTCTCCACCTGCATTCAAGATGGGTTaGCAGCCATATTCCTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLNGQIPTVCFQGRNSPPAFKMG*QPYSLS Trigger: GCTTAAGGAATATGGCTGCCAACCCATCTTGAATGC...AGGTGGAGAATTCCTGCCCTGGAAACAAACCGTGGGTATCTGGCCATTAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTATCTCTTAATGGCCAGATACCCACGGTTTGTTTCCAGGGCAGGAATTCTTTGTCCAGTAGAAGATaGAGACAAGGAAGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TVSLNGQIPTVCFQGRNSLSSRR*RQGRWQ Trigger: TTGCCATCTTCCTTGTCTTCATCTTCTACTGGACAA...AGAATTCCTGCCCTGGAAACAAACCGTGGGTATCTGGCCATTAAGAGATACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS GCA 90 bp | CATGAGCCCAGCAGCACCTGTCTGTGGCATCCACAGGGAGCCCTTTaGCCCCAAGCCCACAGTAGCAGCCATATCCGTAATAGGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HEPSSTCLWHPQGAL*PQAHSSSHIRNRRR Trigger: TCTTCTCCTATTACGGATATGGCTGCTACTGTGGGCTTGGGGGCAAAGGGCTCCCTGTGGATGCCACAGACAGGTGCTGCTGGGCTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 ENSMUST00000124660.7 |
||
| CDS-3UTR CAA 90 bp | TCCACCTCCAGTCCCTTAATGACTGAAAAGACACTCCCCAGACAGCAAAGCTCTCAGTACACAGACTGTTaGTCACACTCACAGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STSSPLMTEKTLPRQQSSQYTDC*SHSQAF Trigger: GAAGGCCTGTGAGTGTGACAAACAGTCTGTGTACTG...AGAGCTTTGCTGTCTGGGGAGTGTCTTTTCAGTCATTAAGGGACTGGAGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||
| CDS-3UTR CAA 90 bp | GAATTCTCCACCTCCAGTCCCTTAATGACTGAAAAGACACTCCCCAGACAGCAACAGTACACAGACTGTTaGTCACACTCACAGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EFSTSSPLMTEKTLPRQQQYTDC*SHSQAF Trigger: GAAGGCCTGTGAGTGTGACAAACAGTCTGTGTACTG...TTGCTGTCTGGGGAGTGTCTTTTCAGTCATTAAGGGACTGGAGGTGGAGAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030530.6 ENSMUST00000105808.8 |
||