Pregenerated sensors for PLA2G15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031903Ensembl transcript IDs: ENSMUST00000034377.8, ENSMUST00000212963.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAACCCAGCCTGGAGGGATCACGGAGACAATACGAGCAACTGGCCTaGCTGCAGGGGCTTACCCGACTGCCTCCAGGAGACCCCACACTC | + |
|
Preference number: 1 (lower is better) Translates to: EPSLEGSRRQYEQLA*LQGLTRLPPGDPTL Trigger: GAGTGTGGGGTCTCCTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGCCAGTTGCTCGTATTGTCTCCGTGATCCCTCCAGGCTGGGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR GCA 90 bp | CTTCCCGGCAGCTCCTGCAATGATACTCTGTGCTCTTGGCGGCTCTaGCAGGCTTGGCACTGCAGGACGCTCTCCAGGTTCACCGTGCCG | + |
|
Preference number: 1 (lower is better) Translates to: LPGSSCNDTLCSWRL*QAWHCRTLSRFTVP Trigger: CGGCACGGTGAACCTGGAGAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCCGCCAAGAGCACAGAGTATCATTGCAGGAGCTGCCGGGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 90 bp | CCAGCCTGGAGGGATCACGGAGACAATACGAGCAACTGGCCTGCCTaGAGGGGCTTACCCGACTGCCTCCAGGAGACCCCACACTCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: PAWRDHGDNTSNWPA*RGLPDCLQETPHSE Trigger: TTCTGAGTGTGGGGTCTCCTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGCCAGTTGCTCGTATTGTCTCCGTGATCCCTCCAGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR GCA 90 bp | GGCTCTGCCAGGCTTGGCACTGCAGGACGCTCTCCAGGTTCACCGTaGCGTCACCATCGCCGAAGCAGATTTTGGGGTCCCGATCAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: GSARLGTAGRSPGSP*RHHRRSRFWGPDQE Trigger: TTCCTGATCGGGACCCCAAAATCTGCTTCGGCGATGGTGACGGCACGGTGAACCTGGAGAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 90 bp | GGAGACAATACGAGCAACTGGCCTGCCTGCAGGGGCTTACCCGACTaGCTCCAGGAGACCCCACACTCAGAATGTCCACCAGCGAGGTCA | + |
|
Preference number: 1 (lower is better) Translates to: GDNTSNWPACRGLPD*LQETPHSECPPARS Trigger: TGACCTCGCTGGTGGACATTCTGAGTGTGGGGTCTCCTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGCCAGTTGCTCGTATTGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | GTAAAGAACCCAGCCTGGAGGGATCACGGAGACAATACGAGCAACTaGCCTGCCTGCAGGGGCTTACCCGACTGCCTCCAGGAGACCCCA | + |
|
Preference number: 1 (lower is better) Translates to: VKNPAWRDHGDNTSN*PACRGLPDCLQETP Trigger: TGGGGTCTCCTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGCCAGTTGCTCGTATTGTCTCCGTGATCCCTCCAGGCTGGGTTCTTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | CGTGGGAACACCAGTGCCATACAAGCAGTGCAGCTCCACCCCGGGTaGCGTCATGGCTTCAACCAGCCCTTCTGTGTCCTGCCGCATGAA | + |
|
Preference number: 1 (lower is better) Translates to: RGNTSAIQAVQLHPG*RHGFNQPFCVLPHE Trigger: TTCATGCGGCAGGACACAGAAGGGCTGGTTGAAGCCATGACGCCACCCGGGGTGGAGCTGCACTGCTTGTATGGCACTGGTGTTCCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | AGCTCCTGCAATGATACTCTGTGCTCTTGGCGGCTCTGCCAGGCTTaGCACTGCAGGACGCTCTCCAGGTTCACCGTGCCGTCACCATCG | + |
|
Preference number: 1 (lower is better) Translates to: SSCNDTLCSWRLCQA*HCRTLSRFTVPSPS Trigger: CGATGGTGACGGCACGGTGAACCTGGAGAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCCGCCAAGAGCACAGAGTATCATTGCAGGAGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | ATGTGCTCGCTTCCCGGCAGCTCCTGCAATGATACTCTGTGCTCTTaGCGGCTCTGCCAGGCTTGGCACTGCAGGACGCTCTCCAGGTTC | + |
|
Preference number: 1 (lower is better) Translates to: MCSLPGSSCNDTLCS*RLCQAWHCRTLSRF Trigger: GAACCTGGAGAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCCGCCAAGAGCACAGAGTATCATTGCAGGAGCTGCCGGGAAGCGAGCACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 90 bp | TCCACCCCGGGTGGCGTCATGGCTTCAACCAGCCCTTCTGTGTCCTaGCGCATGAACCAGCCATCTTCGAAACCGATGTCCCGGAAGAAC | + |
|
Preference number: 1 (lower is better) Translates to: STPGGVMASTSPSVS*RMNQPSSKPMSRKN Trigger: GTTCTTCCGGGACATCGGTTTCGAAGATGGCTGGTTCATGCGGCAGGACACAGAAGGGCTGGTTGAAGCCATGACGCCACCCGGGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | CTAGCCACCTGTGGCCAGTGTAGTGGGCAACCTGAGGCCAGTGCGTaGGAAGGTCACCCGGGGATCTCTGTGGAATCTTTCATGGCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: LATCGQCSGQPEASA*EGHPGISVESFMAG Trigger: TCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCCACGCACTGGCCTCAGGTTGCCCACTACACTGGCCACAGGTGGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR TCA 90 bp | CGGGTGGCGTCATGGCTTCAACCAGCCCTTCTGTGTCCTGCCGCATaGACCAGCCATCTTCGAAACCGATGTCCCGGAAGAACCGGTGAT | + |
|
Preference number: 1 (lower is better) Translates to: RVASWLQPALLCPAA*TSHLRNRCPGRTGD Trigger: ATCACCGGTTCTTCCGGGACATCGGTTTCGAAGATGGCTGGTTCATGCGGCAGGACACAGAAGGGCTGGTTGAAGCCATGACGCCACCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 90 bp | GTCAGAGGCCAAGAAAAGCTCCGTGGTCCAGCCATCCAGCAGCCCTaGCTGGCGGAGGACATCAAGGTTCCAGAAGCACACGTTTCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: VRGQEKLRGPAIQQP*LAEDIKVPEAHVSD Trigger: ATCTGAAACGTGTGCTTCTGGAACCTTGATGTCCTCCGCCAGGCAGGGCTGCTGGATGGCTGGACCACGGAGCTTTTCTTGGCCTCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | TGGGGTCCCGATCAGGAAAGCTCTCGTAGTAGAAAGAGTTTGGCGTaGGAACACCAGTGCCATACAAGCAGTGCAGCTCCACCCCGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: WGPDQESSRSRKSLA*EHQCHTSSAAPPRV Trigger: CACCCGGGGTGGAGCTGCACTGCTTGTATGGCACTGGTGTTCCCACGCCAAACTCTTTCTACTACGAGAGCTTTCCTGATCGGGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | GAGGCCAAGAAAAGCTCCGTGGTCCAGCCATCCAGCAGCCCTGCCTaGCGGAGGACATCAAGGTTCCAGAAGCACACGTTTCAGATAAGC | + |
|
Preference number: 1 (lower is better) Translates to: EAKKSSVVQPSSSPA*RRTSRFQKHTFQIS Trigger: GCTTATCTGAAACGTGTGCTTCTGGAACCTTGATGTCCTCCGCCAGGCAGGGCTGCTGGATGGCTGGACCACGGAGCTTTTCTTGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 90 bp | CAGGAAAGCTCTCGTAGTAGAAAGAGTTTGGCGTGGGAACACCAGTaGCATACAAGCAGTGCAGCTCCACCCCGGGTGGCGTCATGGCTT | + |
|
Preference number: 1 (lower is better) Translates to: QESSRSRKSLAWEHQ*HTSSAAPPRVASWL Trigger: AAGCCATGACGCCACCCGGGGTGGAGCTGCACTGCTTGTATGGCACTGGTGTTCCCACGCCAAACTCTTTCTACTACGAGAGCTTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | CGCTCTCCAGGTTCACCGTGCCGTCACCATCGCCGAAGCAGATTTTaGGGTCCCGATCAGGAAAGCTCTCGTAGTAGAAAGAGTTTGGCG | + |
|
Preference number: 1 (lower is better) Translates to: RSPGSPCRHHRRSRF*GPDQESSRSRKSLA Trigger: CGCCAAACTCTTTCTACTACGAGAGCTTTCCTGATCGGGACCCCAAAATCTGCTTCGGCGATGGTGACGGCACGGTGAACCTGGAGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | GGCAACCTGAGGCCAGTGCGTGGGAAGGTCACCCGGGGATCTCTGTaGAATCTTTCATGGCAGGACATCAGCTCAGTAACTAACATCCCT | + |
|
Preference number: 1 (lower is better) Translates to: GNLRPVRGKVTRGSL*NLSWQDISSVTNIP Trigger: AGGGATGTTAGTTACTGAGCTGATGTCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCCACGCACTGGCCTCAGGTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | GATTTTGGGGTCCCGATCAGGAAAGCTCTCGTAGTAGAAAGAGTTTaGCGTGGGAACACCAGTGCCATACAAGCAGTGCAGCTCCACCCC | + |
|
Preference number: 1 (lower is better) Translates to: DFGVPIRKALVVERV*RGNTSAIQAVQLHP Trigger: GGGGTGGAGCTGCACTGCTTGTATGGCACTGGTGTTCCCACGCCAAACTCTTTCTACTACGAGAGCTTTCCTGATCGGGACCCCAAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 90 bp | CCAGTGCGTGGGAAGGTCACCCGGGGATCTCTGTGGAATCTTTCATaGCAGGACATCAGCTCAGTAACTAACATCCCTCAAAAGGGAAGG | + |
|
Preference number: 1 (lower is better) Translates to: PVRGKVTRGSLWNLS*QDISSVTNIPQKGR Trigger: CCTTCCCTTTTGAGGGATGTTAGTTACTGAGCTGATGTCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCCACGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR GCA 90 bp | TTCAAAGCTCTGGACTGTTTTCCTGCAAACCAAAACCCATTCAGCTaGCTGGTGGTAGTGTTGGGCAGGAACTCTACCACCTCTCAACCC | + |
|
Preference number: 1 (lower is better) Translates to: FKALDCFPANQNPFS*LVVVLGRNSTTSQP Trigger: GGGTTGAGAGGTGGTAGAGTTCCTGCCCAACACTACCACCAGGCAGCTGAATGGGTTTTGGTTTGCAGGAAAACAGTCCAGAGCTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGTGCGTGGGAAGGTCACCCGGGGATCTCTGTGGAATCTTTCATGGCAGGACGGCTCTGCCAGGCTTaGCACTGCAGGACGCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: ASAWEGHPGISVESFMAGRLCQA*HCRTLS Trigger: GGAGAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCCG...TCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCCACGCACTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR TCA 90 bp | GCGGCTCTGCCAGGCTTGGCACTGCAGGACGCTCTCCAGGTTCACCGTGCCGTCCTCCTGGGACTTGAATaGTGGTCACAAACTCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: AALPGLALQDALQVHRAVLLGLE*WSQTLP Trigger: TGGCAGAGTTTGTGACCATCATTCAAGTCCCAGGAG...GACGGCACGGTGAACCTGGAGAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCCCTAAGGCAGTCCCAGATTCCCCATCCCTGCTGTCACACAGAGACCATGCCTGAGGCCAGTGCGTaGGAAGGTCACCCGGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: LSLRQSQIPHPCCHTETMPEASA*EGHPGI Trigger: GATCCCCGGGTGACCTTCCCACGCACTGGCCTCAGG...CATGGTCTCTGTGTGACAGCAGGGATGGGGAATCTGGGACTGCCTTAGGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | GACCCCACACTCAGAATGTCCACCAGCGAGGTCACAGGGAAGCCAGCAGCTCTATCCAGCAGCCCTGCCTaGCGGAGGACATCAAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: DPTLRMSTSEVTGKPAALSSSPA*RRTSRF Trigger: GAACCTTGATGTCCTCCGCCAGGCAGGGCTGCTGGA...TAGAGCTGCTGGCTTCCCTGTGACCTCGCTGGTGGACATTCTGAGTGTGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCCATCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAAGTGCCATACAAGCAGTaGAGCTCCACCCCGGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: FPIPAVTQRPCGIPGANKVPYKQ*SSTPGG Trigger: GCCACCCGGGGTGGAGCTGCACTGCTTGTATGGCAC...TTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGATGGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAAAAGCTCCGTGGTCCAGCCATCCAGCAGCCCTGCCTGGCGGAGGACATCGAGGCAGATGCCTCCTaGGACTTGAATGATGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: QEKLRGPAIQQPCLAEDIEADAS*DLNDGH Trigger: GTGACCATCATTCAAGTCCCAGGAGGCATCTGCCTC...GATGTCCTCCGCCAGGCAGGGCTGCTGGATGGCTGGACCACGGAGCTTTTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCACCCGGGGATCTCTGTGGAATCTTTCATGGCAGGACATCAGCTCAGTAACCCCCGGGTGGCGTCATaGCTTCAACCAGCCCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GHPGISVESFMAGHQLSNPRVAS*LQPALL Trigger: CAGAAGGGCTGGTTGAAGCCATGACGCCACCCGGGG...GTTACTGAGCTGATGTCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTCCCCTTAAACTACAGGTCCCAGAACCAACAGAGCCAGCTTCAGTACCGGGATACTCTGTGCTCTTaGCGGCTCTGCCAGGCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PLPLNYRSQNQQSQLQYRDTLCS*RLCQAW Trigger: CCAAGCCTGGCAGAGCCGCCAAGAGCACAGAGTATC...CCGGTACTGAAGCTGGCTCTGTTGGTTCTGGGACCTGTAGTTTAAGGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGCAGTCCCAGATTCCCCATCCCTGCTGTCACACAGAGACCATGTGGCATCCATGGCCCCCAAGAATTaGGAGGTCCTCTGCTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KAVPDSPSLLSHRDHVASMAPKN*EVLCCP Trigger: TGGACAGCAGAGGACCTCTCAATTCTTGGGGGCCAT...GGATGCCACATGGTCTCTGTGTGACAGCAGGGATGGGGAATCTGGGACTGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGAGCCAGCGTGAGGTCACAATTCAGCAGCAGCAGCAGCAGCAGTCTCCTTAGCCCTTCTGTGTCCTaGCGCATGAACCAGCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: SRASVRSQFSSSSSSSLLSPSVS*RMNQPS Trigger: AGATGGCTGGTTCATGCGGCAGGACACAGAAGGGCT...AAGGAGACTGCTGCTGCTGCTGCTGCTGAATTGTGACCTCACGCTGGCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCCCTAAGGCAGTCCCAGATTCCCCATCCCTGCTGTCACACAGAGACCATGCGCCGAAGCAGATTTTaGGGTCCCGATCAGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LSLRQSQIPHPCCHTETMRRSRF*GPDQES Trigger: GCTTTCCTGATCGGGACCCCAAAATCTGCTTCGGCG...CATGGTCTCTGTGTGACAGCAGGGATGGGGAATCTGGGACTGCCTTAGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGAAGGTCACCCGGGGATCTCTGTGGAATCTTTCATGGCAGGACATCAGCTCTGTGTCCTGCCGCATaGACCAGCCATCTTCGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VGRSPGDLCGIFHGRTSALCPAA*TSHLRN Trigger: GTTTCGAAGATGGCTGGTTCATGCGGCAGGACACAG...AGCTGATGTCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAACAATCCCCCGTGGCTGTTCCCTTaGGCTCACTTTCTTTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLLSHRDHVASLGQTNNPPWLFP*AHFLSR Trigger: CCTAGAAAGAAAGTGAGCTCAAGGGAACAGCCACGG...GGGATTGTTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCATCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAACAACAGATTCCCCATCCCTaGTGTCACACAGAGACCATG | + |
|
Preference number: 2 (lower is better) Translates to: PIPAVTQRPCGIPGANKQQIPHP*CHTETM Trigger: CATGGTCTCTGTGTGACAGCAGGGATGGGGAATCTG...TTGTTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAACAATCCCGAGGCAGATGCCTCCTaGGACTTGAATGATGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SLLSHRDHVASLGQTNNPEADAS*DLNDGH Trigger: GTGACCATCATTCAAGTCCCAGGAGGCATCTGCCTC...GGGATTGTTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCAACCCTGTGCCAGCCCAAGTGGATAGTAGAAATACCCCACAGCGGGGTGGTAAAGAACCCAGCCTaGAGGGATCACGGAGACAAT | + |
|
Preference number: 2 (lower is better) Translates to: LSTLCQPKWIVEIPHSGVVKNPA*RDHGDN Trigger: ATTGTCTCCGTGATCCCTCCAGGCTGGGTTCTTTAC...CACCCCGCTGTGGGGTATTTCTACTATCCACTTGGGCTGGCACAGGGTTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CAA 90 bp | TGTTTTCCTGCAAACCAAAACCCATTCAGCTGCCTGGTGGTAGTGTaGGGCAGGAACTCTACCACCTCTCAACCCTGTGCCAGCCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: CFPANQNPFSCLVVV*GRNSTTSQPCASPS Trigger: ACTTGGGCTGGCACAGGGTTGAGAGGTGGTAGAGTTCCTGCCCAACACTACCACCAGGCAGCTGAATGGGTTTTGGTTTGCAGGAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CAA 90 bp | AGATTTTGGGGTCCCGATCAGGAAAGCTCTCGTAGTAGAAAGAGTTaGGCGTGGGAACACCAGTGCCATACAAGCAGTGCAGCTCCACCC | + |
|
Preference number: 2 (lower is better) Translates to: RFWGPDQESSRSRKS*AWEHQCHTSSAAPP Trigger: GGGTGGAGCTGCACTGCTTGTATGGCACTGGTGTTCCCACGCCAAACTCTTTCTACTACGAGAGCTTTCCTGATCGGGACCCCAAAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAACAATCCCCGTGGCTGTTCCCTTaGGCTCACTTTCTTTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: IPAVTQRPCGIPGANKQSPWLFP*AHFLSR Trigger: CCTAGAAAGAAAGTGAGCTCAAGGGAACAGCCACGG...GGATTGTTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCAACCCTGTGCCAGCCCAAGTGGATAGTAGAAATACCCCACAGCGGGGTGAGGAATCTTAGGACATaGCCCCCAAGAATTGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LSTLCQPKWIVEIPHSGVRNLRT*PPRIER Trigger: CCTCTCAATTCTTGGGGGCCATGTCCTAAGATTCCT...CACCCCGCTGTGGGGTATTTCTACTATCCACTTGGGCTGGCACAGGGTTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR GCA 90 bp | GGACTGTTTTCCTGCAAACCAAAACCCATTCAGCTGCCTGGTGGTAGTGTTGGGCACCTCTCAACCCTGTaGCAGCCCAAGTGGATAGTA | + |
|
Preference number: 2 (lower is better) Translates to: GLFSCKPKPIQLPGGSVGHLSTL*QPKWIV Trigger: TACTATCCACTTGGGCTGGCACAGGGTTGAGAGGTG...CCCAACACTACCACCAGGCAGCTGAATGGGTTTTGGTTTGCAGGAAAACAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTTTCCTGCAAACCAAAACCCATTCAGCTGCCTGGTGGTAGTGTTGGGCAGCTCCTGGGACTTGAATaGTGGTCACAAACTCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LFSCKPKPIQLPGGSVGQLLGLE*WSQTLP Trigger: TGGCAGAGTTTGTGACCATCATTCAAGTCCCAGGAG...CTGCCCAACACTACCACCAGGCAGCTGAATGGGTTTTGGTTTGCAGGAAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGTGCGTGGGAAGGTCACCCGGGGATCTCTGTGGAATCTTTCATGGCAGGACTTCTTCCTTCTTCATaGCCATTCTACAGAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: ASAWEGHPGISVESFMAGLLPSS*PFYRRK Trigger: CTTTCTTCTGTAGAATGGCCATGAAGAAGGAAGAAG...TCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCCACGCACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCCATCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAAGCCTTTTCAAAGCTCTaGACTGTTTTCCTGCAAACC | + |
|
Preference number: 2 (lower is better) Translates to: FPIPAVTQRPCGIPGANKAFSKL*TVFLQT Trigger: GGTTTGCAGGAAAACAGTCCAGAGCTTTGAAAAGGC...TTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGATGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCTTAAACTACAGGTCCCAGAACCAACAGAGCCAGCTTCAGTACCGGGACCTCTCTGGACTGTTTTCCTaGAAACCAAAACCCATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PLNYRSQNQQSQLQYRDLSGLFS*KPKPIQ Trigger: CTGAATGGGTTTTGGTTTGCAGGAAAACAGTCCAGA...GAGGTCCCGGTACTGAAGCTGGCTCTGTTGGTTCTGGGACCTGTAGTTTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCTCTCAACCCTGTGCCAGCCCAAGTGGATAGTAGAAATACCCCACAGCGGGCTTCTTCCTTCTTCATaGCCATTCTACAGAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HLSTLCQPKWIVEIPHSGLLPSS*PFYRRK Trigger: CTTTCTTCTGTAGAATGGCCATGAAGAAGGAAGAAG...CCCGCTGTGGGGTATTTCTACTATCCACTTGGGCTGGCACAGGGTTGAGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGATGATAGGAATGTGCTTAACAAGGGAAGTCCAGCATCAGAAACGATATGGGCCAGAATACTTTTATTaGCAAAATCGAGGTACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: QMIGMCLTREVQHQKRYGPEYFY*QNRGTV Trigger: AACTGTACCTCGATTTTGGCAATAAAAGTATTCTGG...CCCATATCGTTTCTGATGCTGGACTTCCCTTGTTAAGCACATTCCTATCATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | CCAGCCTGGAGGGATCACGGAGACAATACGAGCAACTaGCCTGCCTGCAGGGGCTTACCCGACTGCCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PAWRDHGDNTSN*PACRGLPDCLQ Trigger: CTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGCCAGTTGCTCGTATTGTCTCCGTGATCCCTCCAGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR GCA 72 bp | ACGAGCAACTGGCCTGCCTGCAGGGGCTTACCCGACTaGCTCCAGGAGACCCCACACTCAGAATGTCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: TSNWPACRGLPD*LQETPHSECPP Trigger: TGGTGGACATTCTGAGTGTGGGGTCTCCTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGCCAGTTGCTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR GCA 72 bp | CTGGAGGGATCACGGAGACAATACGAGCAACTGGCCTaGCTGCAGGGGCTTACCCGACTGCCTCCAGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LEGSRRQYEQLA*LQGLTRLPPGD Trigger: GTCTCCTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGCCAGTTGCTCGTATTGTCTCCGTGATCCCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR GCA 72 bp | AGGCTTGGCACTGCAGGACGCTCTCCAGGTTCACCGTaGCGTCACCATCGCCGAAGCAGATTTTGGGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RLGTAGRSPGSP*RHHRRSRFWGP Trigger: GGGACCCCAAAATCTGCTTCGGCGATGGTGACGGCACGGTGAACCTGGAGAGCGTCCTGCAGTGCCAAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | CTTCCCGGCAGCTCCTGCAATGATACTCTGTGCTCTTaGCGGCTCTGCCAGGCTTGGCACTGCAGGACGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPGSSCNDTLCS*RLCQAWHCRTL Trigger: GAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCCGCCAAGAGCACAGAGTATCATTGCAGGAGCTGCCGGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR TCA 72 bp | GTGAGGGGCCAAACAAGCCAGCCTCCAGAGCCAGCGTaGGGTCACAATTCAGCAGCAGCAGCAGCAGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VRGQTSQPPEPA*GHNSAAAAAAV Trigger: GACTGCTGCTGCTGCTGCTGCTGAATTGTGACCTCACGCTGGCTCTGGAGGCTGGCTTGTTTGGCCCCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | ACCAGTGCCATACAAGCAGTGCAGCTCCACCCCGGGTaGCGTCATGGCTTCAACCAGCCCTTCTGTGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSAIQAVQLHPG*RHGFNQPFCVL Trigger: CAGGACACAGAAGGGCTGGTTGAAGCCATGACGCCACCCGGGGTGGAGCTGCACTGCTTGTATGGCACTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 72 bp | AGCTCCTGCAATGATACTCTGTGCTCTTGGCGGCTCTaGCAGGCTTGGCACTGCAGGACGCTCTCCAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSCNDTLCSWRL*QAWHCRTLSRF Trigger: GAACCTGGAGAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCCGCCAAGAGCACAGAGTATCATTGCAGGAGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR TCA 72 bp | CATCTCAATGTGCTCGCTTCCCGGCAGCTCCTGCAATaGTACTCTGTGCTCTTGGCGGCTCTGCCAGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HLNVLASRQLLQ*YSVLLAALPGL Trigger: CAAGCCTGGCAGAGCCGCCAAGAGCACAGAGTATCATTGCAGGAGCTGCCGGGAAGCGAGCACATTGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 72 bp | GGTGGCGTCATGGCTTCAACCAGCCCTTCTGTGTCCTaGCGCATGAACCAGCCATCTTCGAAACCGATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GGVMASTSPSVS*RMNQPSSKPMS Trigger: GGACATCGGTTTCGAAGATGGCTGGTTCATGCGGCAGGACACAGAAGGGCTGGTTGAAGCCATGACGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 72 bp | TCTCGTAGTAGAAAGAGTTTGGCGTGGGAACACCAGTaGCATACAAGCAGTGCAGCTCCACCCCGGGTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SRSRKSLAWEHQ*HTSSAAPPRVA Trigger: CGCCACCCGGGGTGGAGCTGCACTGCTTGTATGGCACTGGTGTTCCCACGCCAAACTCTTTCTACTACGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 72 bp | GCTAGCATCTCAATGTGCTCGCTTCCCGGCAGCTCCTaGAATGATACTCTGTGCTCTTGGCGGCTCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ASISMCSLPGSS*NDTLCSWRLCQ Trigger: CTGGCAGAGCCGCCAAGAGCACAGAGTATCATTGCAGGAGCTGCCGGGAAGCGAGCACATTGAGATGCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | AAAAGCTCCGTGGTCCAGCCATCCAGCAGCCCTGCCTaGCGGAGGACATCAAGGTTCCAGAAGCACACGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KSSVVQPSSSPA*RRTSRFQKHTF Trigger: AAACGTGTGCTTCTGGAACCTTGATGTCCTCCGCCAGGCAGGGCTGCTGGATGGCTGGACCACGGAGCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTCCCCTTAAACTACAGGTCCCAGAACCAACAGAGCCAGCTTCAGTACCGGGCCAAGGTGGTGGCATaGGCTAGCATCTCAATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLPLNYRSQNQQSQLQYRAKVVA*ASISMC Trigger: GCACATTGAGATGCTAGCCAATGCCACCACCTTGGC...CCGGTACTGAAGCTGGCTCTGTTGGTTCTGGGACCTGTAGTTTAAGGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR TCA 72 bp | TCATGGCTTCAACCAGCCCTTCTGTGTCCTGCCGCATaGACCAGCCATCTTCGAAACCGATGTCCCGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SWLQPALLCPAA*TSHLRNRCPGR Trigger: TCTTCCGGGACATCGGTTTCGAAGATGGCTGGTTCATGCGGCAGGACACAGAAGGGCTGGTTGAAGCCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | GAACTCTACCACCTCTCAACCCTGTGCCAGCCCAAGTaGATAGTAGAAATACCCCACAGCGGGGTGCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: ELYHLSTLCQPK*IVEIPHSGVHH Trigger: ATGGTGCACCCCGCTGTGGGGTATTTCTACTATCCACTTGGGCTGGCACAGGGTTGAGAGGTGGTAGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | GGTTCACCGTGCCGTCACCATCGCCGAAGCAGATTTTaGGGTCCCGATCAGGAAAGCTCTCGTAGTAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSPCRHHRRSRF*GPDQESSRSRK Trigger: CTTTCTACTACGAGAGCTTTCCTGATCGGGACCCCAAAATCTGCTTCGGCGATGGTGACGGCACGGTGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR GCA 72 bp | AGTGTTGGGCAGGAACTCTACCACCTCTCAACCCTGTaGCAGCCCAAGTGGATAGTAGAAATACCCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVGQELYHLSTL*QPKWIVEIPHS Trigger: GCTGTGGGGTATTTCTACTATCCACTTGGGCTGGCACAGGGTTGAGAGGTGGTAGAGTTCCTGCCCAACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | TCCGTCACAAGCTGGGACATCAGGAATCTTAGGACATaGCCCCCAAGAATTGAGAGGTCCTCTGCTGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVTSWDIRNLRT*PPRIERSSAVQ Trigger: CTGGACAGCAGAGGACCTCTCAATTCTTGGGGGCCATGTCCTAAGATTCCTGATGTCCCAGCTTGTGACGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | GAAGCACACGTTTCAGATAAGCCAAGGTGGTGGCATTaGCTAGCATCTCAATGTGCTCGCTTCCCGGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EAHVSDKPRWWH*LASQCARFPAA Trigger: AGCTGCCGGGAAGCGAGCACATTGAGATGCTAGCCAATGCCACCACCTTGGCTTATCTGAAACGTGTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | GGGAAGGTCACCCGGGGATCTCTGTGGAATCTTTCATaGCAGGACATCAGCTCAGTAACTAACATCCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GKVTRGSLWNLS*QDISSVTNIPQ Trigger: TTGAGGGATGTTAGTTACTGAGCTGATGTCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | GATCAGGAAAGCTCTCGTAGTAGAAAGAGTTTGGCGTaGGAACACCAGTGCCATACAAGCAGTGCAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DQESSRSRKSLA*EHQCHTSSAAP Trigger: TGGAGCTGCACTGCTTGTATGGCACTGGTGTTCCCACGCCAAACTCTTTCTACTACGAGAGCTTTCCTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGACTGTAAAGAACCCAGCCTGGAGGGATCACGGAGACAATACGAGCAACTGTCTACAGAAGAAAGGTaGAGAAATAGCATTCCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: ADCKEPSLEGSRRQYEQLSTEER*RNSIPP Trigger: CGGAGGAATGCTATTTCTCAACCTTTCTTCTGTAGA...CAGTTGCTCGTATTGTCTCCGTGATCCCTCCAGGCTGGGTTCTTTACAGTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR TCA 72 bp | CTCATGGGAAGCTCTAAGCAACCGTGGCTGTTCCCTTaGGCTCACTTTCTTTCTAGGAACCTTCAAAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LMGSSKQPWLFP*AHFLSRNLQRS Trigger: GCTTCTTTGAAGGTTCCTAGAAAGAAAGTGAGCTCAAGGGAACAGCCACGGTTGCTTAGAGCTTCCCATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CCA 72 bp | GTGCTTAACAAGGGAAGTCCAGCATCAGAAACGATATaGGAAGGCAGTGTGGTCCAGCTTCTAAGTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLNKGSPASETI*EGSVVQLLSGF Trigger: AAAACCACTTAGAAGCTGGACCACACTGCCTTCCCATATCGTTTCTGATGCTGGACTTCCCTTGTTAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGCAGGACATCAGCTCAGTAACTAACATCCCTCAAAAGGGAAGGTTAGGGTCTACAGAAGAAAGGTaGAGAAATAGCATTCCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: SWQDISSVTNIPQKGRLGSTEER*RNSIPP Trigger: CGGAGGAATGCTATTTCTCAACCTTTCTTCTGTAGA...CCCTAACCTTCCCTTTTGAGGGATGTTAGTTACTGAGCTGATGTCCTGCCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR GCA 90 bp | GACCAGAGAGCTAAGAGGATTGCACGGTCCAAGTTAGGGACTGGGGTGAGGGGCGTGCCATACAAGCAGTaGAGCTCCACCCCGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DQRAKRIARSKLGTGVRGVPYKQ*SSTPGG Trigger: GCCACCCGGGGTGGAGCTGCACTGCTTGTATGGCAC...GCCCCTCACCCCAGTCCCTAACTTGGACCGTGCAATCCTCTTAGCTCTCTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR GCA 90 bp | GACCCCACACTCAGAATGTCCACCAGCGAGGTCACAGGGAAGCCAGCAGCTCTATGCCAGGCTTGGCACTaGAGGACGCTCTCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPTLRMSTSEVTGKPAALCQAWH*RTLSRF Trigger: GAACCTGGAGAGCGTCCTGCAGTGCCAAGCCTGGCA...TAGAGCTGCTGGCTTCCCTGTGACCTCGCTGGTGGACATTCTGAGTGTGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGAAGGTCACCCGGGGATCTCTGTGGAATCTTTCATGGCAGGACATCAGCTACGTTGCCCATGCTGTaGGCGACCAGCACCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGRSPGDLCGIFHGRTSATLPML*ATSTTG Trigger: CCCCGTGGTGCTGGTCGCCCACAGCATGGGCAACGT...AGCTGATGTCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACCAGCGAGGTCACAGGGAAGCCAGCAGCTCTAGCCACCTGTGGCCAGCGCCGAAGCAGATTTTaGGGTCCCGATCAGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSTSEVTGKPAALATCGQRRSRF*GPDQES Trigger: GCTTTCCTGATCGGGACCCCAAAATCTGCTTCGGCG...CTGGCCACAGGTGGCTAGAGCTGCTGGCTTCCCTGTGACCTCGCTGGTGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCGAGGTCACAGGGAAGCCAGCAGCTCTAGCCACCTGTGGCCAGTGTAGTGAGACGGCAGATCGCTaGTGTTCCCGGATCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSEVTGKPAALATCGQCSETADR*CSRIFS Trigger: ACTGAAGATCCGGGAACAGCAGCGATCTGCCGTCTC...ACTACACTGGCCACAGGTGGCTAGAGCTGCTGGCTTCCCTGTGACCTCGCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAACAATCCCGGCTCTGCCAGGCTTaGCACTGCAGGACGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPAVTQRPCGIPGANKQSRLCQA*HCRTLS Trigger: GGAGAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCCG...GGATTGTTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGCCTGCAGGGGCTTACCCGACTGCCTCCAGGAGACCCCACACTCAGAATGAACCCACATTCCTCTTaGTGGGGTCTAGGAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ACLQGLTRLPPGDPTLRMNPHSS*WGLGIP Trigger: TGGAATTCCTAGACCCCAGCAAGAGGAATGTGGGTT...CATTCTGAGTGTGGGGTCTCCTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCAGCCTGGAGGGATCACGGAGACAATACGAGCAACTGGCCTGCCTGCAGGTCCTTCCAGACTTGTaGCTGCCGCTGCAGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EPSLEGSRRQYEQLACLQVLPDL*LPLQKV Trigger: TACTTTCTGCAGCGGCAGCCACAAGTCTGGAAGGAC...CTGCAGGCAGGCCAGTTGCTCGTATTGTCTCCGTGATCCCTCCAGGCTGGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CCA 90 bp | ACACTCAGAATGTCCACCAGCGAGGTCACAGGGAAGCCAGCAGCTCTAGCCACCCATCGGGAAACTGGGTaGCCCGAGATGTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLRMSTSEVTGKPAALATHRETG*PEMFCC Trigger: ACAACAGAACATCTCGGGCCACCCAGTTTCCCGATG...GGTGGCTAGAGCTGCTGGCTTCCCTGTGACCTCGCTGGTGGACATTCTGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCAGAGCCAGCGTGAGGTCACAATTCAGCAGCAGCAGCAGCAGCAGTCTCATCGGGAAACTGGGTaGCCCGAGATGTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLQSQREVTIQQQQQQQSHRETG*PEMFCC Trigger: ACAACAGAACATCTCGGGCCACCCAGTTTCCCGATG...AGACTGCTGCTGCTGCTGCTGCTGAATTGTGACCTCACGCTGGCTCTGGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGTCCCAGATTCCCCATCCCTGCTGTCACACAGAGACCATGTGGCATCCTTCCCGGATCTTCAGTaGCCCAATGACGGGAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: KAVPDSPSLLSHRDHVASFPDLQ*PNDGNA Trigger: CGCATTCCCGTCATTGGGCCACTGAAGATCCGGGAA...GGATGCCACATGGTCTCTGTGTGACAGCAGGGATGGGGAATCTGGGACTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCCCTTAAACTACAGGTCCCAGAACCAACAGAGCCAGCTTCAGTACCGGTTCCCGGATCTTCAGTaGCCCAATGACGGGAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLPLNYRSQNQQSQLQYRFPDLQ*PNDGNA Trigger: CGCATTCCCGTCATTGGGCCACTGAAGATCCGGGAA...CCGGTACTGAAGCTGGCTCTGTTGGTTCTGGGACCTGTAGTTTAAGGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGCAACCTGAGGCCAGTGCGTGGGAAGGTCACCCGGGGATCTCTGTGGAATTCATGTGACCAAGTGTaGTTGTATGGCAGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGNLRPVRGKVTRGSLWNSCDQV*LYGSSQ Trigger: CTGGCTACTGCCATACAACCACACTTGGTCACATGA...ATTCCACAGAGATCCCCGGGTGACCTTCCCACGCACTGGCCTCAGGTTGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | GGACTGTTTTCCTGCAAACCAAAACCCATTCAGCTGCCTGGTGGTAGTGTTGGGCCCCGGGTGGCGTCATaGCTTCAACCAGCCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSCKPKPIQLPGGSVGPRVAS*LQPALL Trigger: CAGAAGGGCTGGTTGAAGCCATGACGCCACCCGGGG...CCCAACACTACCACCAGGCAGCTGAATGGGTTTTGGTTTGCAGGAAAACAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCCATCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAAAGCCCTTCTGTGTCCTaGCGCATGAACCAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FPIPAVTQRPCGIPGANKSPSVS*RMNQPS Trigger: AGATGGCTGGTTCATGCGGCAGGACACAGAAGGGCT...TTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGATGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGAAGGTCACCCGGGGATCTCTGTGGAATCTTTCATGGCAGGACATCAGCTGCGTGGGAACACCAGTaGCATACAAGCAGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGRSPGDLCGIFHGRTSAAWEHQ*HTSSAA Trigger: AGCTGCACTGCTTGTATGGCACTGGTGTTCCCACGC...AGCTGATGTCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGCCAGCGTGAGGTCACAATTCAGCAGCAGCAGCAGCAGCAGTCTCCTTTGCAATGATACTCTGTaGTCTTGGCGGCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRASVRSQFSSSSSSSLLCNDTL*SWRLCQ Trigger: CTGGCAGAGCCGCCAAGAGCACAGAGTATCATTGCA...AAGGAGACTGCTGCTGCTGCTGCTGCTGAATTGTGACCTCACGCTGGCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGCGTGGGAAGGTCACCCGGGGATCTCTGTGGAATCTTTCATGGCAGGACAGGGCCCCCATACATCTaGTACATCTCCTCGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: QCVGRSPGDLCGIFHGRTGPPYI*YISSII Trigger: GATGATCGAGGAGATGTACCAGATGTATGGGGGCCC...TGTCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACCTTCCCACGCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGCCTGCAGGGGCTTACCCGACTGCCTCCAGGAGACCCCACACTCAGAATGAGTGAGACGAAGGCATaGATATATTTGTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACLQGLTRLPPGDPTLRMSETKA*IYLSFQ Trigger: CTGGAAGGACAAATATATCCATGCCTTCGTCTCACT...CATTCTGAGTGTGGGGTCTCCTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| 3UTR CAA 72 bp | GCAAACCAAAACCCATTCAGCTGCCTGGTGGTAGTGTaGGGCAGGAACTCTACCACCTCTCAACCCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ANQNPFSCLVVV*GRNSTTSQPCA Trigger: GGCACAGGGTTGAGAGGTGGTAGAGTTCCTGCCCAACACTACCACCAGGCAGCTGAATGGGTTTTGGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCTAAGGCAGTCCCAGATTCCCCATCCCTGCTGTCACACAGAGACCATGGATTCAGCCAGAGTGTaGAGTAGCTGTCCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLRQSQIPHPCCHTETMDSARV*SSCPSS Trigger: AGAAGACGGACAGCTACTTCACACTCTGGCTGAATC...CATGGTCTCTGTGTGACAGCAGGGATGGGGAATCTGGGACTGCCTTAGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR TCA 90 bp | GGTCACCCGGGGATCTCTGTGGAATCTTTCATGGCAGGACATCAGCTCAGTAACCTGTGTCCTGCCGCATaGACCAGCCATCTTCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHPGISVESFMAGHQLSNLCPAA*TSHLRN Trigger: GTTTCGAAGATGGCTGGTTCATGCGGCAGGACACAG...GTTACTGAGCTGATGTCCTGCCATGAAAGATTCCACAGAGATCCCCGGGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CCA 90 bp | GACCCCACACTCAGAATGTCCACCAGCGAGGTCACAGGGAAGCCAGCAGCTCTAAGCTTTGCTTCCAACTaGTTACCCAAATCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPTLRMSTSEVTGKPAALSFASN*LPKSPG Trigger: GCCTGGTGATTTGGGTAACCAGTTGGAAGCAAAGCT...TAGAGCTGCTGGCTTCCCTGTGACCTCGCTGGTGGACATTCTGAGTGTGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAACAATCCCGATTCAGCCAGAGTGTaGAGTAGCTGTCCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSHRDHVASLGQTNNPDSARV*SSCPSS Trigger: AGAAGACGGACAGCTACTTCACACTCTGGCTGAATC...GGGATTGTTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR GCA 90 bp | AAGAACCCAGCCTGGAGGGATCACGGAGACAATACGAGCAACTGGCCTGCCTGCTGGCTTATCCAGCTTTaGTTCCAACTGGTTACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KNPAWRDHGDNTSNWPACWLIQL*FQLVTQ Trigger: TTGGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCA...GCAGGCAGGCCAGTTGCTCGTATTGTCTCCGTGATCCCTCCAGGCTGGGTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCTAAGGCAGTCCCAGATTCCCCATCCCTGCTGTCACACAGAGACCATGAGCTTTGCTTCCAACTaGTTACCCAAATCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLRQSQIPHPCCHTETMSFASN*LPKSPG Trigger: GCCTGGTGATTTGGGTAACCAGTTGGAAGCAAAGCT...CATGGTCTCTGTGTGACAGCAGGGATGGGGAATCTGGGACTGCCTTAGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGCCAGCGTGAGGTCACAATTCAGCAGCAGCAGCAGCAGCAGTCTCCTTTCATGTGACCAAGTGTaGTTGTATGGCAGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRASVRSQFSSSSSSSLLSCDQV*LYGSSQ Trigger: CTGGCTACTGCCATACAACCACACTTGGTCACATGA...AAGGAGACTGCTGCTGCTGCTGCTGCTGAATTGTGACCTCACGCTGGCTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | CACCTCTCAACCCTGTGCCAGCCCAAGTGGATAGTAGAAATACCCCACAGCGGGGATAAGCCAAGGTGGTaGCATTGGCTAGCATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLSTLCQPKWIVEIPHSGDKPRW*HWLASQ Trigger: TTGAGATGCTAGCCAATGCCACCACCTTGGCTTATC...CCCGCTGTGGGGTATTTCTACTATCCACTTGGGCTGGCACAGGGTTGAGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCTAAGGCAGTCCCAGATTCCCCATCCCTGCTGTCACACAGAGACCATGTGGCTTATCCAGCTTTaGTTCCAACTGGTTACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLRQSQIPHPCCHTETMWLIQL*FQLVTQ Trigger: TTGGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCA...CATGGTCTCTGTGTGACAGCAGGGATGGGGAATCTGGGACTGCCTTAGGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCCCTGCTGTCACACAGAGACCATGTGGCATCCCTGGGGCAAACAAACAAAACCCACATTCCTCTTaGTGGGGTCTAGGAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PIPAVTQRPCGIPGANKQNPHSS*WGLGIP Trigger: TGGAATTCCTAGACCCCAGCAAGAGGAATGTGGGTT...TTGTTTGTTTGCCCCAGGGATGCCACATGGTCTCTGTGTGACAGCAGGGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CCA 90 bp | ACACTCAGAATGTCCACCAGCGAGGTCACAGGGAAGCCAGCAGCTCTAGCCACCAGTGAGACGAAGGCATaGATATATTTGTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLRMSTSEVTGKPAALATSETKA*IYLSFQ Trigger: CTGGAAGGACAAATATATCCATGCCTTCGTCTCACT...GGTGGCTAGAGCTGCTGGCTTCCCTGTGACCTCGCTGGTGGACATTCTGAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR TCA 90 bp | ACACTCAGAATGTCCACCAGCGAGGTCACAGGGAAGCCAGCAGCTCTAGCCACCAAATACCTTTTCATGTaGCCAAGTGTGGTTGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRMSTSEVTGKPAALATKYLFM*PSVVVW Trigger: CCATACAACCACACTTGGTCACATGAAAAGGTATTT...GGTGGCTAGAGCTGCTGGCTTCCCTGTGACCTCGCTGGTGGACATTCTGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CCA 90 bp | CTTCATGGCCATTCTACAGAAGAAAGGTTGAGAAATAGCATTCCTCCGAGGCAGGATACTCTGTGCTCTTaGCGGCTCTGCCAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHGHSTEERLRNSIPPRQDTLCS*RLCQAW Trigger: CCAAGCCTGGCAGAGCCGCCAAGAGCACAGAGTATC...CTGCCTCGGAGGAATGCTATTTCTCAACCTTTCTTCTGTAGAATGGCCATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCAAGCTTGTAGACCGTGAAAGAGTCAGAGGCCAAGAAAAGCTCCGTGGTCCAAGGTGGTGGCATTaGCTAGCATCTCAATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAKLVDRERVRGQEKLRGPRWWH*LASQCA Trigger: AGCACATTGAGATGCTAGCCAATGCCACCACCTTGG...ACCACGGAGCTTTTCTTGGCCTCTGACTCTTTCACGGTCTACAAGCTTGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCCCTTAAACTACAGGTCCCAGAACCAACAGAGCCAGCTTCAGTACCGGGCGGCTCTGCCAGGCTaGGCACTGCAGGACGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLPLNYRSQNQQSQLQYRAALPG*ALQDAL Trigger: GAGAGCGTCCTGCAGTGCCAAGCCTGGCAGAGCCGC...CCGGTACTGAAGCTGGCTCTGTTGGTTCTGGGACCTGTAGTTTAAGGGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS GCA 90 bp | CTTGTGGCTGCCGCTGCAGAAAGTAGAGCATGTACACGTTGCCCATaGTGTGGGCGACCAGCACCACGGGGCCCCCATACATCTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: LVAAAAESRACTRCP*CGRPAPRGPHTSGT Trigger: TGTACCAGATGTATGGGGGCCCCGTGGTGCTGGTCGCCCACAGCATGGGCAACGTGTACATGCTCTACTTTCTGCAGCGGCAGCCACAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS GCA 90 bp | TCCAGACTTGTGGCTGCCGCTGCAGAAAGTAGAGCATGTACACGTTaGCCATGCTGTGGGCGACCAGCACCACGGGGCCCCCATACATCT | + |
|
Preference number: 5 (lower is better) Translates to: SRLVAAAAESRACTR*PCCGRPAPRGPHTS Trigger: AGATGTATGGGGGCCCCGTGGTGCTGGTCGCCCACAGCATGGGCAACGTGTACATGCTCTACTTTCTGCAGCGGCAGCCACAAGTCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGCCTGCAGGGGCTTACCCGACTGCCTCCAGGAGACCCCACACTCAGAATGTTTGTCCTTCCAGACTaGTGGCTGCCGCTGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ACLQGLTRLPPGDPTLRMFVLPD*WLPLQK Trigger: TTTCTGCAGCGGCAGCCACAAGTCTGGAAGGACAAA...CATTCTGAGTGTGGGGTCTCCTGGAGGCAGTCGGGTAAGCCCCTGCAGGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS GCA 90 bp | GTGTGGTTGTATGGCAGTAGCCAGCTGGTAGAGACGGCAGATCGCTaGTGTTCCCGGATCTTCAGTGGCCCAATGACGGGAATGCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: VWLYGSSQLVETADR*CSRIFSGPMTGMRL Trigger: CAATCGCATTCCCGTCATTGGGCCACTGAAGATCCGGGAACAGCAGCGATCTGCCGTCTCTACCAGCTGGCTACTGCCATACAACCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGCCAGCGTGAGGTCACAATTCAGCAGCAGCAGCAGCAGCAGTCTCCTTACGGGAATGCGATTGTaGTCTCCTGAGGCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SRASVRSQFSSSSSSSLLTGMRL*SPEART Trigger: TGTCCTGGCCTCAGGAGACAACAATCGCATTCCCGT...AAGGAGACTGCTGCTGCTGCTGCTGCTGAATTGTGACCTCACGCTGGCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CAA 90 bp | TTAAACTACAGGTCCCAGAACCAACAGAGCCAGCTTCAGTACCGGGACCTCCGTACGGGAATGCGATTGTaGTCTCCTGAGGCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LNYRSQNQQSQLQYRDLRTGMRL*SPEART Trigger: TGTCCTGGCCTCAGGAGACAACAATCGCATTCCCGT...ACGGAGGTCCCGGTACTGAAGCTGGCTCTGTTGGTTCTGGGACCTGTAGTTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CAA 90 bp | ACACTCAGAATGTCCACCAGCGAGGTCACAGGGAAGCCAGCAGCTCTAGCCACCGGTAGTGTACAACCTTaGGCTTATCCAGCTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLRMSTSEVTGKPAALATGSVQP*AYPALL Trigger: AAGCAAAGCTGGATAAGCCAAAGGTTGTACACTACC...GGTGGCTAGAGCTGCTGGCTTCCCTGTGACCTCGCTGGTGGACATTCTGAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS GCA 90 bp | CTTCTTGGAGCAAAGGTAGTGTACAACCTTTGGCTTATCCAGCTTTaGTTCCAACTGGTTACCCAAATCACCAGGCACCAGCACCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGAKVVYNLWLIQL*FQLVTQITRHQHHR Trigger: CCGGTGGTGCTGGTGCCTGGTGATTTGGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCAAAGGTTGTACACTACCTTTGCTCCAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CAA 90 bp | TCATGGCAGGACATCAGCTCAGTAACTAACATCCCTCAAAAGGGAAGGTTAGGGGCCAAGGTGGTGGCATaGGCTAGCATCTCAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SWQDISSVTNIPQKGRLGAKVVA*ASISMC Trigger: GCACATTGAGATGCTAGCCAATGCCACCACCTTGGC...CCCTAACCTTCCCTTTTGAGGGATGTTAGTTACTGAGCTGATGTCCTGCCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS CCA 90 bp | TTAGTCGTGGGTGTGTATACAAATACCTTTTCATGTGACCAAGTGTaGTTGTATGGCAGTAGCCAGCTGGTAGAGACGGCAGATCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVVGVYTNTFSCDQV*LYGSSQLVETADRC Trigger: GCAGCGATCTGCCGTCTCTACCAGCTGGCTACTGCCATACAACCACACTTGGTCACATGAAAAGGTATTTGTATACACACCCACGACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS CCA 90 bp | GAAGTAGCTGTCCGTCTTCTTGGAGCAAAGGTAGTGTACAACCTTTaGCTTATCCAGCTTTGCTTCCAACTGGTTACCCAAATCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EVAVRLLGAKVVYNL*LIQLCFQLVTQITR Trigger: CCTGGTGATTTGGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCAAAGGTTGTACACTACCTTTGCTCCAAGAAGACGGACAGCTACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGTTCCCTTGAGCTCACTTTCTTTCTAGGAACCTTCAAAGAAGCCCCATCCGGTAGTGTACAACCTTaGGCTTATCCAGCTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCSLELTFFLGTFKEAPSGSVQP*AYPALL Trigger: AAGCAAAGCTGGATAAGCCAAAGGTTGTACACTACC...GGATGGGGCTTCTTTGAAGGTTCCTAGAAAGAAAGTGAGCTCAAGGGAACAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS GCA 72 bp | GTGGCTGCCGCTGCAGAAAGTAGAGCATGTACACGTTaGCCATGCTGTGGGCGACCAGCACCACGGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VAAAAESRACTR*PCCGRPAPRGP Trigger: GGGGCCCCGTGGTGCTGGTCGCCCACAGCATGGGCAACGTGTACATGCTCTACTTTCTGCAGCGGCAGCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS GCA 72 bp | GCCGCTGCAGAAAGTAGAGCATGTACACGTTGCCCATaGTGTGGGCGACCAGCACCACGGGGCCCCCATACA | + |
|
Preference number: 6 (lower is better) Translates to: AAAESRACTRCP*CGRPAPRGPHT Trigger: TGTATGGGGGCCCCGTGGTGCTGGTCGCCCACAGCATGGGCAACGTGTACATGCTCTACTTTCTGCAGCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS CCA 72 bp | CTGTGGGCGACCAGCACCACGGGGCCCCCATACATCTaGTACATCTCCTCGATCATCTCTCGCAGGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LWATSTTGPPYI*YISSIISRRAK Trigger: CTTGGCCCTGCGAGAGATGATCGAGGAGATGTACCAGATGTATGGGGGCCCCGTGGTGCTGGTCGCCCACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS CAA 72 bp | CGGATCTTCAGTGGCCCAATGACGGGAATGCGATTGTaGTCTCCTGAGGCCAGGACACGCAGCGTCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RIFSGPMTGMRL*SPEARTRSVLA Trigger: GGCCAAGACGCTGCGTGTCCTGGCCTCAGGAGACAACAATCGCATTCCCGTCATTGGGCCACTGAAGATCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS GCA 72 bp | TATGGCAGTAGCCAGCTGGTAGAGACGGCAGATCGCTaGTGTTCCCGGATCTTCAGTGGCCCAATGACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: YGSSQLVETADR*CSRIFSGPMTG Trigger: TCCCGTCATTGGGCCACTGAAGATCCGGGAACAGCAGCGATCTGCCGTCTCTACCAGCTGGCTACTGCCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS TCA 72 bp | CAGATCGCTGCTGTTCCCGGATCTTCAGTGGCCCAATaGCGGGAATGCGATTGTTGTCTCCTGAGGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QIAAVPGSSVAQ*RECDCCLLRPG Trigger: TCCTGGCCTCAGGAGACAACAATCGCATTCCCGTCATTGGGCCACTGAAGATCCGGGAACAGCAGCGATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS CAA 72 bp | CAGGGCGCCCCCAGTGAGACGAAGGCATGGATATATTaGTCCTTCCAGACTTGTGGCTGCCGCTGCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGAPSETKAWIY*SFQTCGCRCRK Trigger: CTTTCTGCAGCGGCAGCCACAAGTCTGGAAGGACAAATATATCCATGCCTTCGTCTCACTGGGGGCGCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS CCA 72 bp | GACGAAGGCATGGATATATTTGTCCTTCCAGACTTGTaGCTGCCGTTGGGGCTCGCCGCCAATCATAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DEGMDIFVLPDL*LPLGLAANHRE Trigger: CTCCCTATGATTGGCGGCGAGCCCCAACGGCAGCCACAAGTCTGGAAGGACAAATATATCCATGCCTTCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212963.2 |
||
| CDS CCA 72 bp | TGTACAACCTTTGGCTTATCCAGCTTTGCTTCCAACTaGTTACCCAAATCACCAGGCACCAGCACCACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CTTFGLSSFASN*LPKSPGTSTTG Trigger: CCCGGTGGTGCTGGTGCCTGGTGATTTGGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCAAAGGTTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS CAA 90 bp | TCTTCTTGGAGCAAAGGTAGTGTACAACCTTTGGCTTATCCAGCTTaGCTTCCAACTGGTTACCCAAATCACCAGGCACCAGCACCACCG | + |
|
Preference number: 6 (lower is better) Translates to: SSWSKGSVQPLAYPA*LPTGYPNHQAPAPP Trigger: CGGTGGTGCTGGTGCCTGGTGATTTGGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCAAAGGTTGTACACTACCTTTGCTCCAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS CAA 90 bp | GTCGTGGGTGTGTATACAAATACCTTTTCATGTGACCAAGTGTGGTaGTATGGCAGTAGCCAGCTGGTAGAGACGGCAGATCGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VVGVYTNTFSCDQVW*YGSSQLVETADRCC Trigger: ACAGCAGCGATCTGCCGTCTCTACCAGCTGGCTACTGCCATACAACCACACTTGGTCACATGAAAAGGTATTTGTATACACACCCACGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS GCA 72 bp | GCAAAGGTAGTGTACAACCTTTGGCTTATCCAGCTTTaGTTCCAACTGGTTACCCAAATCACCAGGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: AKVVYNLWLIQL*FQLVTQITRHQ Trigger: CTGGTGCCTGGTGATTTGGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCAAAGGTTGTACACTACCTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS CCA 72 bp | GACGAAGGCATGGATATATTTGTCCTTCCAGACTTGTaGCTGCCGCTGCAGAAAGTAGAGCATGTACACGTT | + |
|
Preference number: 6 (lower is better) Translates to: DEGMDIFVLPDL*LPLQKVEHVHV Trigger: AACGTGTACATGCTCTACTTTCTGCAGCGGCAGCCACAAGTCTGGAAGGACAAATATATCCATGCCTTCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034377.8 |
||
| CDS CCA 72 bp | GTCCGTCTTCTTGGAGCAAAGGTAGTGTACAACCTTTaGCTTATCCAGCTTTGCTTCCAACTGGTTACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VRLLGAKVVYNL*LIQLCFQLVTQ Trigger: TTGGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCAAAGGTTGTACACTACCTTTGCTCCAAGAAGACGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||
| CDS CAA 72 bp | AGCAAAGGTAGTGTACAACCTTTGGCTTATCCAGCTTaGCTTCCAACTGGTTACCCAAATCACCAGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SKGSVQPLAYPA*LPTGYPNHQAP Trigger: TGGTGCCTGGTGATTTGGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCAAAGGTTGTACACTACCTTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034377.8 ENSMUST00000212963.2 |
||