Pregenerated sensors for PLA2G12B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009646Ensembl transcript IDs: ENSMUST00000009790.14, ENSMUST00000162643.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATAGCTCTTCTTTCTCCTCCTCTGCACAGATGCAGGCTGCCCGCTaGCTGTTCATAAAGGGTCGGCAGCCCAAGGTCCACACGGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: HSSSFSSSAQMQAAR*LFIKGRQPKVHTVL Trigger: CAACACCGTGTGGACCTTGGGCTGCCGACCCTTTATGAACAGTCAGCGGGCAGCCTGCATCTGTGCAGAGGAGGAGAAAGAAGAGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| 3UTR TCA 90 bp | GAAGGGTTTGAAGAAAGGACGGCTCTCTTGTCACACAGCTGTCTCTaGAACAGCCCCGACGTGCCTCAAAGCCTGGAAGAGCCACCTTCT | + |
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Preference number: 1 (lower is better) Translates to: EGFEERTALLSHSCL*NSPDVPQSLEEPPS Trigger: AGAAGGTGGCTCTTCCAGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGCTGTGTGACAAGAGAGCCGTCCTTTCTTCAAACCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR CCA 90 bp | CTACTTGTAGCGGTCCTTCAGCGAAGAACTGAATTTCCAGGCACGTaGTTCTCGGCTGGGGAGAGCGGTCTTCAGACTCTGCGTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: LLVAVLQRRTEFPGT*FSAGESGLQTLRVF Trigger: AAAGACACGCAGAGTCTGAAGACCGCTCTCCCCAGCCGAGAACCACGTGCCTGGAAATTCAGTTCTTCGCTGAAGGACCGCTACAAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR TCA 90 bp | AAGGCCTGCTGCCTCCCTTTTCCAGCTCGTGATTTCCGAAGGGTTTaGAGAAAGGACGGCTCTCTTGTCACACAGCTGTCTCTGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: KACCLPFPARDFRRV*RKDGSLVTQLSLKQ Trigger: CTGTTTCAGAGACAGCTGTGTGACAAGAGAGCCGTCCTTTCTTCAAACCCTTCGGAAATCACGAGCTGGAAAAGGGAGGCAGCAGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR TCA 90 bp | CTAGGAATAGCAAGATCTACTTGTAGCGGTCCTTCAGCGAAGAACTaGATTTCCAGGCACGTGGTTCTCGGCTGGGGAGAGCGGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LGIARSTCSGPSAKN*ISRHVVLGWGERSS Trigger: TGAAGACCGCTCTCCCCAGCCGAGAACCACGTGCCTGGAAATTCAGTTCTTCGCTGAAGGACCGCTACAAGTAGATCTTGCTATTCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR CCA 90 bp | AAGTGTGCTTTATTAAATGTGAGGTGTCAACTGGCAACTGAAACATaGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGGCTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: KCALLNVRCQLATET*ANEKSLCPKCLGSP Trigger: GGGGGAGCCCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAGTTGACACCTCACATTTAATAAAGCACACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTCTTGTCACACAGCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTATGCAGGCTGCCCGCTaGCTGTTCATAAAGGGTCGG | + |
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Preference number: 2 (lower is better) Translates to: GSLVTQLSLKQPRRASKPMQAAR*LFIKGR Trigger: CCGACCCTTTATGAACAGTCAGCGGGCAGCCTGCAT...AGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGCTGTGTGACAAGAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGGCCCTCCTCTGCACAGATaGAGGCTGCCCGCTGACTGT | + |
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Preference number: 2 (lower is better) Translates to: LATETWANEKSLCPKCLGPPLHR*RLPADC Trigger: ACAGTCAGCGGGCAGCCTGCATCTGTGCAGAGGAGG...GCCCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATGTTTGGGCTCCCCCAGATTTCGCTTATGACTGTCATGACCAGATCTAGGTCAAAGGACAAGGCCTaGTGCCTCCCTTTTCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QMFGLPQISLMTVMTRSRSKDKA*CLPFPA Trigger: AGCTGGAAAAGGGAGGCAGCAGGCCTTGTCCTTTGA...CCTAGATCTGGTCATGACAGTCATAAGCGAAATCTGGGGGAGCCCAAACATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATGTTTGGGCTCCCCCAGATTTCGCTTATGACTGTCATGACCAGATCTAGGACGTGCCTCAAAGCCTaGAAGAGCCACCTTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QMFGLPQISLMTVMTRSRTCLKA*KSHLLF Trigger: GAAGAGAAGGTGGCTCTTCCAGGCTTTGAGGCACGT...CCTAGATCTGGTCATGACAGTCATAAGCGAAATCTGGGGGAGCCCAAACATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGGCAGGTCCACACGGTGTTaGACACGGTATCAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LATETWANEKSLCPKCLGRSTRC*TRYQPE Trigger: CTCTGGCTGATACCGTGTTCAACACCGTGTGGACCT...GCCCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCAACTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATTCAAAGGACAAGGCCTaGTGCCTCCCTTTTCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GVNWQLKHGPMKSHYVPNSKDKA*CLPFPA Trigger: AGCTGGAAAAGGGAGGCAGCAGGCCTTGTCCTTTGA...ATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAGTTGACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR-3UTR TCA 90 bp | AACTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGCCTTCAGCGAAGAACTaGATTTCCAGGCACGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: NWQLKHGPMKSHYVPNVWPSAKN*ISRHVV Trigger: AACCACGTGCCTGGAAATTCAGTTCTTCGCTGAAGG...CCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR TCA 72 bp | GCAAGATCTACTTGTAGCGGTCCTTCAGCGAAGAACTaGATTTCCAGGCACGTGGTTCTCGGCTGGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: ARSTCSGPSAKN*ISRHVVLGWGE Trigger: CTCTCCCCAGCCGAGAACCACGTGCCTGGAAATTCAGTTCTTCGCTGAAGGACCGCTACAAGTAGATCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR GCA 72 bp | TCTTGTCACACAGCTGTCTCTGAAACAGCCCCGACGTaGCTCAAAGCCTGGAAGAGCCACCTTCTCTTCATA | + |
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Preference number: 3 (lower is better) Translates to: SCHTAVSETAPT*LKAWKSHLLFI Trigger: TATGAAGAGAAGGTGGCTCTTCCAGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGCTGTGTGACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| 3UTR CCA 72 bp | GCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTaGAAGAGCCACCTTCTCTTCATAGCTCTTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: AVSETAPTCLKA*KSHLLFIALLS Trigger: AGAAAGAAGAGCTATGAAGAGAAGGTGGCTCTTCCAGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| 3UTR-3UTR CAA 90 bp | AACTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGAAGGTCCACACGGTGTaGAACACGGTATCAGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: NWQLKHGPMKSHYVPNVWKVHTV*NTVSAR Trigger: TCTGGCTGATACCGTGTTCAACACCGTGTGGACCTT...CCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| 3UTR CCA 72 bp | CATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTaGGCTCCCCCAGATTTCGCTTATGACTGTCATGAC | + |
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Preference number: 3 (lower is better) Translates to: HGPMKSHYVPNV*APPDFAYDCHD Trigger: GTCATGACAGTCATAAGCGAAATCTGGGGGAGCCCAAACATTTGGGACATAATGACTTTTCATTGGCCCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| 3UTR CCA 72 bp | TTATTAAATGTGAGGTGTCAACTGGCAACTGAAACATaGGCCAATGAAAAGTCATTATGTCCCAAATGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LLNVRCQLATET*ANEKSLCPKCL Trigger: CAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAGTTGACACCTCACATTTAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTGGAAGAGCCACCTTCTCAGGACTCCTCTTCCTTaGGGCTGGGGTCACTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: AVSETAPTCLKAWKSHLLRTPLP*GWGHSE Trigger: CTCAGAGTGACCCCAGCCCCAAGGAAGAGGAGTCCT...GAGAAGGTGGCTCTTCCAGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR TCA 90 bp | GGCTCTCTTGTCACACAGCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTGAGGTCGGAGCAGATTaGGTGGAGGCACCATCGGAA | + |
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Preference number: 4 (lower is better) Translates to: GSLVTQLSLKQPRRASKPEVGAD*VEAPSE Trigger: TTCCGATGGTGCCTCCACTCAATCTGCTCCGACCTC...AGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGCTGTGTGACAAGAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR GCA 90 bp | GTTCTCGGCTGGGGAGAGCGGTCTTCAGACTCTGCGTGTCTTTTTCTTAACTTTAAGCTGCCCCGCAGCTaGCTCAGGCCCCAGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VLGWGERSSDSACLFLNFKLPRS*LRPQSE Trigger: CTCTGACTGGGGCCTGAGGCAGCTGCGGGGCAGCTT...AAAGTTAAGAAAAAGACACGCAGAGTCTGAAGACCGCTCTCCCCAGCCGAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR TCA 90 bp | TCTTGTCACACAGCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTGGAAGAGGTCCACACGGTGTTaGACACGGTATCAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SCHTAVSETAPTCLKAWKRSTRC*TRYQPE Trigger: CTCTGGCTGATACCGTGTTCAACACCGTGTGGACCT...CTTCCAGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGCTGTGTGACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR GCA 90 bp | GGCTCTCTTGTCACACAGCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTCCAGGAAATAGGAACTaGAACCATTGGGCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GSLVTQLSLKQPRRASKPPGNRN*NHWAPG Trigger: CCCAGGAGCCCAATGGTTGCAGTTCCTATTTCCTGG...AGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGCTGTGTGACAAGAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR TCA 90 bp | GGCTCTCTTGTCACACAGCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTTATCGACACCGGTACTaGCAGACTCCATTCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GSLVTQLSLKQPRRASKPYRHRY*QTPFFP Trigger: AGGGAAGAATGGAGTCTGTCAGTACCGGTGTCGATA...AGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGCTGTGTGACAAGAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR GCA 90 bp | AGCCCCGACGTGCCTCAAAGCCTGGAAGAGCCACCTTCTCTTCATAGCTCTTCTTGGTCATTGCTGGGATaGCCAGGTCCATACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SPDVPQSLEEPPSLHSSSWSLLG*PGPYFL Trigger: CAGGAAGTATGGACCTGGGCATCCCAGCAATGACCA...AGAAGAGCTATGAAGAGAAGGTGGCTCTTCCAGGCTTTGAGGCACGTCGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| CDS-3UTR GCA 90 bp | ACTGAATTTCCAGGCACGTGGTTCTCGGCTGGGGAGAGCGGTCTTCAGACTCTGAGACGTCCAGCTGGTTaGAACACTTGGTCATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TEFPGTWFSAGESGLQTLRRPAG*NTWSLL Trigger: CAGCAATGACCAAGTGTTGCAACCAGCTGGACGTCT...CAGAGTCTGAAGACCGCTCTCCCCAGCCGAGAACCACGTGCCTGGAAATTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCCCCAGATTTCGCTTATGACTGTCATGACCAGATCTAGGAATAGCAAGCCTCCTCTGCACAGATaGAGGCTGCCCGCTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: GLPQISLMTVMTRSRNSKPPLHR*RLPADC Trigger: ACAGTCAGCGGGCAGCCTGCATCTGTGCAGAGGAGG...CTTGCTATTCCTAGATCTGGTCATGACAGTCATAAGCGAAATCTGGGGGAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR CCA 90 bp | AACAGCCCCGACGTGCCTCAAAGCCTGGAAGAGCCACCTTCTCTTCATAGCTCTGCTGGTTGCAACACTTaGTCATTGCTGGGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NSPDVPQSLEEPPSLHSSAGCNT*SLLGCP Trigger: TGGGCATCCCAGCAATGACCAAGTGTTGCAACCAGC...AGAGCTATGAAGAGAAGGTGGCTCTTCCAGGCTTTGAGGCACGTCGGGGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| CDS-3UTR TCA 90 bp | GCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTGGAAGAGCCACCTTCTCTACTTCCTGGTACCTTaGTACCCAGGAAATAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: AVSETAPTCLKAWKSHLLYFLVP*YPGNRN Trigger: GTTCCTATTTCCTGGGTATCAAGGTACCAGGAAGTA...GAGAAGGTGGCTCTTCCAGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CCA 90 bp | GGCTGGGGAGAGCGGTCTTCAGACTCTGCGTGTCTTTTTCTTAACTTTCCTCAAAGGCTGCTTCCACGTTaGAGACAAAGCCCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GWGERSSDSACLFLNFPQRLLPR*RQSPGS Trigger: GGAGCCTGGGCTTTGTCTCCAACGTGGAAGCAGCCT...TTGAGGAAAGTTAAGAAAAAGACACGCAGAGTCTGAAGACCGCTCTCCCCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR TCA 90 bp | CTCGTGATTTCCGAAGGGTTTGAAGAAAGGACGGCTCTCTTGTCACACAGCTGTCTCCCAGCAGCTCCATaGAGGAATCCACGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LVISEGFEERTALLSHSCLPAAP*RNPRSC Trigger: ACAGCTACGTGGATTCCTTCATGGAGCTGCTGGGAG...ACAGCTGTGTGACAAGAGAGCCGTCCTTTCTTCAAACCCTTCGGAAATCACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR GCA 90 bp | ACTGAATTTCCAGGCACGTGGTTCTCGGCTGGGGAGAGCGGTCTTCAGACTCTGGCACCATCGGAATTTTaGGTCACAGCGGTATTTGTT | + |
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Preference number: 4 (lower is better) Translates to: TEFPGTWFSAGESGLQTLAPSEF*VTAVFV Trigger: AACAAATACCGCTGTGACGCAAAATTCCGATGGTGC...CAGAGTCTGAAGACCGCTCTCCCCAGCCGAGAACCACGTGCCTGGAAATTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CCA 90 bp | AACAGCCCCGACGTGCCTCAAAGCCTGGAAGAGCCACCTTCTCTTCATAGCTCTTCGGAGCAGATTGAGTaGAGGCACCATCGGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: NSPDVPQSLEEPPSLHSSSEQIE*RHHRNF Trigger: AAAATTCCGATGGTGCCTCCACTCAATCTGCTCCGA...AGAGCTATGAAGAGAAGGTGGCTCTTCCAGGCTTTGAGGCACGTCGGGGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| CDS-3UTR TCA 90 bp | AACTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGGGGCTGGGGTCACTCTaGGCCAGGTTCCCTACCAGG | + |
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Preference number: 4 (lower is better) Translates to: NWQLKHGPMKSHYVPNVWGLGSL*ARFPTR Trigger: CCTGGTAGGGAACCTGGCTCAGAGTGACCCCAGCCC...CCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR GCA 90 bp | GTTCTCGGCTGGGGAGAGCGGTCTTCAGACTCTGCGTGTCTTTTTCTTAACTTTTGGTCATTGCTGGGATaGCCAGGTCCATACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: VLGWGERSSDSACLFLNFWSLLG*PGPYFL Trigger: CAGGAAGTATGGACCTGGGCATCCCAGCAATGACCA...AAAGTTAAGAAAAAGACACGCAGAGTCTGAAGACCGCTCTCCCCAGCCGAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR GCA 90 bp | TCTTGTCACACAGCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTGGAAGGCACCATCGGAATTTTaGGTCACAGCGGTATTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SCHTAVSETAPTCLKAWKAPSEF*VTAVFV Trigger: AACAAATACCGCTGTGACGCAAAATTCCGATGGTGC...CTTCCAGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGCTGTGTGACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR TCA 90 bp | CAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGGCTCCCGAGGTCGGAGCAGATTaGGTGGAGGCACCATCGGAA | + |
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Preference number: 4 (lower is better) Translates to: QLKHGPMKSHYVPNVWAPEVGAD*VEAPSE Trigger: TTCCGATGGTGCCTCCACTCAATCTGCTCCGACCTC...GGGAGCCCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCCCCAGATTTCGCTTATGACTGTCATGACCAGATCTAGGAATAGCAAGTGCACAGATGCAGGCTaGCCGCTGACTGTTCATAAA | + |
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Preference number: 4 (lower is better) Translates to: GLPQISLMTVMTRSRNSKCTDAG*PLTVHK Trigger: TTTATGAACAGTCAGCGGGCAGCCTGCATCTGTGCA...CTTGCTATTCCTAGATCTGGTCATGACAGTCATAAGCGAAATCTGGGGGAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR TCA 90 bp | GGTGTCAACTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATATGCAGGCTGCCCGCTaGCTGTTCATAAAGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: GVNWQLKHGPMKSHYVPNMQAAR*LFIKGR Trigger: CCGACCCTTTATGAACAGTCAGCGGGCAGCCTGCAT...ATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAGTTGACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR CCA 90 bp | AACTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGGCTGGTTGCAACACTTaGTCATTGCTGGGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NWQLKHGPMKSHYVPNVWAGCNT*SLLGCP Trigger: TGGGCATCCCAGCAATGACCAAGTGTTGCAACCAGC...CCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CCA 90 bp | CAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGGCTCCCTCGGAGCAGATTGAGTaGAGGCACCATCGGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: QLKHGPMKSHYVPNVWAPSEQIE*RHHRNF Trigger: AAAATTCCGATGGTGCCTCCACTCAATCTGCTCCGA...GGGAGCCCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR TCA 90 bp | GGTGTCAACTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATTACTTCCTGGTACCTTaGTACCCAGGAAATAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GVNWQLKHGPMKSHYVPNYFLVP*YPGNRN Trigger: GTTCCTATTTCCTGGGTATCAAGGTACCAGGAAGTA...ATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAGTTGACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CCA 90 bp | CCCGCAGCTGCCTCAGGCCCCAGTCAGAGTAGGACTCCTCTTCCTTaGGGCTGGGGTCACTCTGAGCCAGGTTCCCTACCAGGCCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: PAAASGPSQSRTPLP*GWGHSEPGSLPGQA Trigger: GGCTTGGCCTGGTAGGGAACCTGGCTCAGAGTGACCCCAGCCCCAAGGAAGAGGAGTCCTACTCTGACTGGGGCCTGAGGCAGCTGCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS CCA 90 bp | GCTGCCTCAGGCCCCAGTCAGAGTAGGACTCCTCTTCCTTGGGGCTaGGGTCACTCTGAGCCAGGTTCCCTACCAGGCCAAGCCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: AASGPSQSRTPLPWG*GHSEPGSLPGQATG Trigger: TCCTGTGGCTTGGCCTGGTAGGGAACCTGGCTCAGAGTGACCCCAGCCCCAAGGAAGAGGAGTCCTACTCTGACTGGGGCCTGAGGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR CAA 90 bp | GCTGTCTCTGAAACAGCCCCGACGTGCCTCAAAGCCTGGAAGAGCCACCTTCTCCAGGCTGCTTCCACGTaGGAGACAAAGCCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: AVSETAPTCLKAWKSHLLQAAST*ETKPRL Trigger: GAGCCTGGGCTTTGTCTCCAACGTGGAAGCAGCCTG...GAGAAGGTGGCTCTTCCAGGCTTTGAGGCACGTCGGGGCTGTTTCAGAGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS TCA 90 bp | AATCACAGGCTGCTTCCACGTTGGAGACAAAGCCCAGGCTCCGCTTaGGGTCGGAGCAGATTGAGTGGAGGCACCATCGGAATTTTGCGT | + |
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Preference number: 5 (lower is better) Translates to: NHRLLPRWRQSPGSA*GRSRLSGGTIGILR Trigger: ACGCAAAATTCCGATGGTGCCTCCACTCAATCTGCTCCGACCTCAAGCGGAGCCTGGGCTTTGTCTCCAACGTGGAAGCAGCCTGTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS GCA 90 bp | GCAGGTGTCGTAGCAGACGTCCAGCTGGTTGCAACACTTGGTCATTaGTGGGATGCCCAGGTCCATACTTCCTGGTACCTTGATACCCAG | + |
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Preference number: 5 (lower is better) Translates to: AGVVADVQLVATLGH*WDAQVHTSWYLDTQ Trigger: CTGGGTATCAAGGTACCAGGAAGTATGGACCTGGGCATCCCAGCAATGACCAAGTGTTGCAACCAGCTGGACGTCTGCTACGACACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS TCA 90 bp | CACGTTGGAGACAAAGCCCAGGCTCCGCTTGAGGTCGGAGCAGATTaGGTGGAGGCACCATCGGAATTTTGCGTCACAGCGGTATTTGTT | + |
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Preference number: 5 (lower is better) Translates to: HVGDKAQAPLEVGAD*VEAPSEFCVTAVFV Trigger: AACAAATACCGCTGTGACGCAAAATTCCGATGGTGCCTCCACTCAATCTGCTCCGACCTCAAGCGGAGCCTGGGCTTTGTCTCCAACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CCA 90 bp | TTGAGTGGAGGCACCATCGGAATTTTGCGTCACAGCGGTATTTGTTaGCACCGCAGGTGTCGTAGCAGACGTCCAGCTGGTTGCAACACT | + |
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Preference number: 5 (lower is better) Translates to: LSGGTIGILRHSGIC*HRRCRSRRPAGCNT Trigger: AGTGTTGCAACCAGCTGGACGTCTGCTACGACACCTGCGGTGCCAACAAATACCGCTGTGACGCAAAATTCCGATGGTGCCTCCACTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CCA 90 bp | TTGGAGACAAAGCCCAGGCTCCGCTTGAGGTCGGAGCAGATTGAGTaGAGGCACCATCGGAATTTTGCGTCACAGCGGTATTTGTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LETKPRLRLRSEQIE*RHHRNFASQRYLLA Trigger: TGCCAACAAATACCGCTGTGACGCAAAATTCCGATGGTGCCTCCACTCAATCTGCTCCGACCTCAAGCGGAGCCTGGGCTTTGTCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CAA 90 bp | AAAGGGTCGGCAGCCCAAGGTCCACACGGTGTTGAACACGGTATCAGCCAGAGAGGCACCATCGGAATTTaGCGTCACAGCGGTATTTGT | + |
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Preference number: 5 (lower is better) Translates to: KGSAAQGPHGVEHGISQRGTIGI*RHSGIC Trigger: ACAAATACCGCTGTGACGCAAAATTCCGATGGTGCC...TCTCTGGCTGATACCGTGTTCAACACCGTGTGGACCTTGGGCTGCCGACCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| CDS-3UTR CAA 90 bp | CAGCTCGTGATTTCCGAAGGGTTTGAAGAAAGGACGGCTCTCTTGTCACACAGCAGCTGGTTGCAACACTaGGTCATTGCTGGGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: QLVISEGFEERTALLSHSSWLQH*VIAGMP Trigger: GGGCATCCCAGCAATGACCAAGTGTTGCAACCAGCT...GCTGTGTGACAAGAGAGCCGTCCTTTCTTCAAACCCTTCGGAAATCACGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CAA 90 bp | CAAATGTTTGGGCTCCCCCAGATTTCGCTTATGACTGTCATGACCAGATCTAGGGCGTCACAGCGGTATTaGTTGGCACCGCAGGTGTCG | + |
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Preference number: 5 (lower is better) Translates to: QMFGLPQISLMTVMTRSRASQRY*LAPQVS Trigger: CGACACCTGCGGTGCCAACAAATACCGCTGTGACGC...CCTAGATCTGGTCATGACAGTCATAAGCGAAATCTGGGGGAGCCCAAACATTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CAA 90 bp | GGCTGGGGAGAGCGGTCTTCAGACTCTGCGTGTCTTTTTCTTAACTTTCCTCAATGCAACACTTGGTCATaGCTGGGATGCCCAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GWGERSSDSACLFLNFPQCNTWS*LGCPGP Trigger: TGGACCTGGGCATCCCAGCAATGACCAAGTGTTGCA...TTGAGGAAAGTTAAGAAAAAGACACGCAGAGTCTGAAGACCGCTCTCCCCAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CAA 90 bp | CTCGTGATTTCCGAAGGGTTTGAAGAAAGGACGGCTCTCTTGTCACACAGCTGTTGCAACACTTGGTCATaGCTGGGATGCCCAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LVISEGFEERTALLSHSCCNTWS*LGCPGP Trigger: TGGACCTGGGCATCCCAGCAATGACCAAGTGTTGCA...ACAGCTGTGTGACAAGAGAGCCGTCCTTTCTTCAAACCCTTCGGAAATCACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CAA 90 bp | CTCGTGATTTCCGAAGGGTTTGAAGAAAGGACGGCTCTCTTGTCACACAGCTGTAGCTGGTTGCAACACTaGGTCATTGCTGGGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: LVISEGFEERTALLSHSCSWLQH*VIAGMP Trigger: GGGCATCCCAGCAATGACCAAGTGTTGCAACCAGCT...ACAGCTGTGTGACAAGAGAGCCGTCCTTTCTTCAAACCCTTCGGAAATCACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS-3UTR CAA 90 bp | CAAATGTTTGGGCTCCCCCAGATTTCGCTTATGACTGTCATGACCAGATCTAGGAAGGTCCACACGGTGTaGAACACGGTATCAGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QMFGLPQISLMTVMTRSRKVHTV*NTVSAR Trigger: TCTGGCTGATACCGTGTTCAACACCGTGTGGACCTT...CCTAGATCTGGTCATGACAGTCATAAGCGAAATCTGGGGGAGCCCAAACATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS-3UTR CAA 90 bp | CTGGCAACTGAAACATGGGCCAATGAAAAGTCATTATGTCCCAAATGTTTGGGCGGCACCATCGGAATTTaGCGTCACAGCGGTATTTGT | + |
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Preference number: 5 (lower is better) Translates to: LATETWANEKSLCPKCLGGTIGI*RHSGIC Trigger: ACAAATACCGCTGTGACGCAAAATTCCGATGGTGCC...GCCCAAACATTTGGGACATAATGACTTTTCATTGGCCCATGTTTCAGTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CCA 72 bp | GGCCCCAGTCAGAGTAGGACTCCTCTTCCTTGGGGCTaGGGTCACTCTGAGCCAGGTTCCCTACCAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: GPSQSRTPLPWG*GHSEPGSLPGQ Trigger: TTGGCCTGGTAGGGAACCTGGCTCAGAGTGACCCCAGCCCCAAGGAAGAGGAGTCCTACTCTGACTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS CAA 72 bp | GGGTATTTCCAGGGTGATGAGCAGAGGGCTTCCACGTaGGAGACAAAGCCCAGGCTCCGCTTGAGGTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GYFQGDEQRAST*ETKPRLRLRSE Trigger: CTCCGACCTCAAGCGGAGCCTGGGCTTTGTCTCCAACGTGGAAGCCCTCTGCTCATCACCCTGGAAATACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| CDS CAA 90 bp | GGTGAGGCAGGGTATTTCCAGGGTGATGAGCAGAGGGCTTCCACGTaGGAGACAAAGCCCAGGCTCCGCTTGAGGTCGGAGCAGATTGAG | + |
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Preference number: 6 (lower is better) Translates to: GEAGYFQGDEQRAST*ETKPRLRLRSEQIE Trigger: CTCAATCTGCTCCGACCTCAAGCGGAGCCTGGGCTTTGTCTCCAACGTGGAAGCCCTCTGCTCATCACCCTGGAAATACCCTGCCTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162643.2 |
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| CDS TCA 72 bp | CTGGGCATCGGCGCCTTTCCATATCGACACCGGTACTaGCAGACTCCATTCTTCCCTCCCAGCAGCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: LGIGAFPYRHRY*QTPFFPPSSSM Trigger: CATGGAGCTGCTGGGAGGGAAGAATGGAGTCTGTCAGTACCGGTGTCGATATGGAAAGGCGCCGATGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS TCA 72 bp | GACAAAGCCCAGGCTCCGCTTGAGGTCGGAGCAGATTaGGTGGAGGCACCATCGGAATTTTGCGTCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: DKAQAPLEVGAD*VEAPSEFCVTA Trigger: CGCTGTGACGCAAAATTCCGATGGTGCCTCCACTCAATCTGCTCCGACCTCAAGCGGAGCCTGGGCTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CAA 90 bp | GAATCACAGGCTGCTTCCACGTTGGAGACAAAGCCCAGGCTCCGCTaGAGGTCGGAGCAGATTGAGTGGAGGCACCATCGGAATTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: ESQAASTLETKPRLR*RSEQIEWRHHRNFA Trigger: CGCAAAATTCCGATGGTGCCTCCACTCAATCTGCTCCGACCTCAAGCGGAGCCTGGGCTTTGTCTCCAACGTGGAAGCAGCCTGTGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS CCA 72 bp | TGCAACCATTGGGCTCCTGGGCTTTGTAACCAGGTCTaGGCATCGGCGCCTTTCCATATCGACACCGGTACT | + |
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Preference number: 6 (lower is better) Translates to: CNHWAPGLCNQV*ASAPFHIDTGT Trigger: AGTACCGGTGTCGATATGGAAAGGCGCCGATGCCCAGACCTGGTTACAAAGCCCAGGAGCCCAATGGTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS CCA 72 bp | GGCACCATCGGAATTTTGCGTCACAGCGGTATTTGTTaGCACCGCAGGTGTCGTAGCAGACGTCCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GTIGILRHSGIC*HRRCRSRRPAG Trigger: ACCAGCTGGACGTCTGCTACGACACCTGCGGTGCCAACAAATACCGCTGTGACGCAAAATTCCGATGGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CCA 72 bp | AAGCCCAGGCTCCGCTTGAGGTCGGAGCAGATTGAGTaGAGGCACCATCGGAATTTTGCGTCACAGCGGTAT | + |
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Preference number: 6 (lower is better) Translates to: KPRLRLRSEQIE*RHHRNFASQRY Trigger: ATACCGCTGTGACGCAAAATTCCGATGGTGCCTCCACTCAATCTGCTCCGACCTCAAGCGGAGCCTGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CAA 72 bp | CGTAGCAGACGTCCAGCTGGTTGCAACACTTGGTCATaGCTGGGATGCCCAGGTCCATACTTCCTGGTACCT | + |
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Preference number: 6 (lower is better) Translates to: RSRRPAGCNTWS*LGCPGPYFLVP Trigger: AGGTACCAGGAAGTATGGACCTGGGCATCCCAGCAATGACCAAGTGTTGCAACCAGCTGGACGTCTGCTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CAA 72 bp | GGTCGGAGCAGATTGAGTGGAGGCACCATCGGAATTTaGCGTCACAGCGGTATTTGTTGGCACCGCAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GRSRLSGGTIGI*RHSGICWHRRC Trigger: ACACCTGCGGTGCCAACAAATACCGCTGTGACGCAAAATTCCGATGGTGCCTCCACTCAATCTGCTCCGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS GCA 72 bp | GTAGCAGACGTCCAGCTGGTTGCAACACTTGGTCATTaGTGGGATGCCCAGGTCCATACTTCCTGGTACCTT | + |
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Preference number: 6 (lower is better) Translates to: VADVQLVATLGH*WDAQVHTSWYL Trigger: AAGGTACCAGGAAGTATGGACCTGGGCATCCCAGCAATGACCAAGTGTTGCAACCAGCTGGACGTCTGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CCA 72 bp | GCAGACGTCCAGCTGGTTGCAACACTTGGTCATTGCTaGGATGCCCAGGTCCATACTTCCTGGTACCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ADVQLVATLGHC*DAQVHTSWYLD Trigger: ATCAAGGTACCAGGAAGTATGGACCTGGGCATCCCAGCAATGACCAAGTGTTGCAACCAGCTGGACGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009790.14 ENSMUST00000162643.2 |
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| CDS CAA 72 bp | TTCATAAAGGGTCGGCAGCCCAAGGTCCACACGGTGTaGAACACGGTATCAGCCAGAGAATCACAGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FIKGRQPKVHTV*NTVSARESQAA Trigger: AGCAGCCTGTGATTCTCTGGCTGATACCGTGTTCAACACCGTGTGGACCTTGGGCTGCCGACCCTTTATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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| CDS TCA 72 bp | TTGCTGGGATGCCCAGGTCCATACTTCCTGGTACCTTaGTACCCAGGAAATAGGAACTGCAACCATTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLGCPGPYFLVP*YPGNRNCNHWA Trigger: AGCCCAATGGTTGCAGTTCCTATTTCCTGGGTATCAAGGTACCAGGAAGTATGGACCTGGGCATCCCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009790.14 |
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