Pregenerated sensors for PLA1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002847Ensembl transcript IDs: ENSMUST00000002926.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CCCTTTAGTAGAAATGGGGTGAAATACGGCTCTCACAAACAGCTCTaGGCACACTGCCCTCGGAAAACTGCGGCCACTGCCTCCTGCATA | + |
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Preference number: 2 (lower is better) Translates to: PFSRNGVKYGSHKQL*AHCPRKTAATASCI Trigger: TATGCAGGAGGCAGTGGCCGCAGTTTTCCGAGGGCAGTGTGCCAAGAGCTGTTTGTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTCAGCTCTTGGCACACTaGCCTCGGAAAACTGCGGCC | + |
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Preference number: 2 (lower is better) Translates to: SVPSTVTAYRENHQEFGLQLLAH*PRKTAA Trigger: GGCCGCAGTTTTCCGAGGGCAGTGTGCCAAGAGCTG...AAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTTTAGTAGAAATGGGGTaGAATACGGCTCTCACAAAC | + |
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Preference number: 2 (lower is better) Translates to: ESSVPSTVTAYRENHQEFLVEMG*NTALTN Trigger: GTTTGTGAGAGCCGTATTTCACCCCATTTCTACTAA...AAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| 3UTR GCA 72 bp | GTGAAATACGGCTCTCACAAACAGCTCTTGGCACACTaGCCTCGGAAAACTGCGGCCACTGCCTCCTGCATA | + |
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Preference number: 3 (lower is better) Translates to: VKYGSHKQLLAH*PRKTAATASCI Trigger: TATGCAGGAGGCAGTGGCCGCAGTTTTCCGAGGGCAGTGTGCCAAGAGCTGTTTGTGAGAGCCGTATTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| 3UTR TCA 72 bp | CCAAGAATTTGGCCTTCCCCTTTAGTAGAAATGGGGTaGAATACGGCTCTCACAAACAGCTCTTGGCACACT | + |
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Preference number: 3 (lower is better) Translates to: PRIWPSPLVEMG*NTALTNSSWHT Trigger: AGTGTGCCAAGAGCTGTTTGTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGGGAAGGCCAAATTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGAGAAGCTAAAAGGGCATTTATGTAAAGCGTTAGATGTTGGTGACGGAGATTCTCACAAACAGCTCTaGGCACACTGCCCTCGGAAA | + |
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Preference number: 3 (lower is better) Translates to: IEKLKGHLCKALDVGDGDSHKQL*AHCPRK Trigger: TTTCCGAGGGCAGTGTGCCAAGAGCTGTTTGTGAGA...ATCTCCGTCACCAACATCTAACGCTTTACATAAATGCCCTTTTAGCTTCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| 3UTR TCA 72 bp | TTTCTATTAAATCCTAAGTATAGATGCTTAAGGGTGTaGGGTAATCACAGTTGTGTCGAAATAGAGAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: FLLNPKYRCLRV*GNHSCVEIEKL Trigger: TAGCTTCTCTATTTCGACACAACTGTGATTACCTCACACCCTTAAGCATCTATACTTAGGATTTAATAGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | GGTGAAATACGGCTCTCACAAACAGCTCTTGGCACACTGCCCTCGGAAAACTGCGGGGAAGGCCATCAGTaGGCAGGTGTTCTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GEIRLSQTALGTLPSENCGEGHQ*AGVLQG Trigger: GCCCTGGAGAACACCTGCCCACTGATGGCCTTCCCC...GCAGTTTTCCGAGGGCAGTGTGCCAAGAGCTGTTTGTGAGAGCCGTATTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | TACGGCTCTCACAAACAGCTCTTGGCACACTGCCCTCGGAAAACTGCGGCCACTCCGTGTCTGTGTGGATaGCTTCTACAAACAGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: YGSHKQLLAHCPRKTAATPCLCG*LLQTGR Trigger: ACGCCCTGTTTGTAGAAGCCATCCACACAGACACGG...AGTGGCCGCAGTTTTCCGAGGGCAGTGTGCCAAGAGCTGTTTGTGAGAGCCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR GCA 90 bp | CTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTCCCCTTTAGTAGAAATGGGGCAGGCACGCCTGCTTaGAGACGCACTGGCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLTGKTTKNLAFPFSRNGAGTPA*RRTGSG Trigger: ACCTGAGCCAGTGCGTCTGCAAGCAGGCGTGCCTGC...CCCATTTCTACTAAAGGGGAAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR TCA 90 bp | GCCTTCCCCTTTAGTAGAAATGGGGTGAAATACGGCTCTCACAAACAGCTCTTGCACTGTGGGTTAGGATaGGCCATGACCCCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: AFPFSRNGVKYGSHKQLLHCGLG*AMTPLP Trigger: AGGGAGAGGGGTCATGGCTCATCCTAACCCACAGTG...CAAGAGCTGTTTGTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGGGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR GCA 90 bp | TCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCCTTCTTCTACTAGCTaGCCACAGCTGGGGTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: SSVPSTVTAYRENHQEFGPSSTS*PQLGSE Trigger: CTCGGACCCCAGCTGTGGGCAGCTAGTAGAAGAAGG...GCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR GCA 90 bp | TCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCTCCACAAGGCTGTGGTaGACACAGTACGGGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: SSVPSTVTAYRENHQEFGSTRLW*TQYGAL Trigger: CAGTGCCCCGTACTGTGTGCACCACAGCCTTGTGGA...GCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR GCA 90 bp | CTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTCCCCTTTAGAAAGCAGGCACGCCTaGTTGCAGACGCACTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LHSNCLQGKPPRIWPSPLESRHA*LQTHWL Trigger: GAGCCAGTGCGTCTGCAAGCAGGCGTGCCTGCTTTC...TAAAGGGGAAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | TCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTGGCTCTGGTGTACTCTaGTCCAGCAGGATCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: SVPSTVTAYRENHQEFGLGSGVL*SSRIQT Trigger: GGTCTGGATCCTGCTGGACCAGAGTACACCAGAGCC...AAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGAATTTGGCCTTCCCCTTTAGTAGAAATGGGGTGAAATACGGCTCTCACCCTCCAGGCTGGCTCTaGTGTACTCTGGTCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TKNLAFPFSRNGVKYGSHPPGWL*CTLVQQ Trigger: CTGCTGGACCAGAGTACACCAGAGCCAGCCTGGAGG...GTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGGGAAGGCCAAATTCTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR TCA 90 bp | GAGTCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGAGAAACTGCACCTTaGGGTTGGTGCCTCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: ESSVPSTVTAYRENHQEFGETAP*GWCLGG Trigger: TCCTCCGAGGCACCAACCTCAAGGTGCAGTTTCTCC...AAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | GAGTCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTTCCGTGCACTTGGGTTaGGTGGTAGGGGGTACGTTC | + |
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Preference number: 4 (lower is better) Translates to: ESSVPSTVTAYRENHQEFSVHLG*VVGGTF Trigger: GAACGTACCCCCTACCACCCAACCCAAGTGCACGGA...AAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGAATTTGGCCTTCCCCTTTAGTAGAAATGGGGTGAAATACGGCTCTCACAGCGTTCCTCCAGGCTaGCTCTGGTGTACTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TKNLAFPFSRNGVKYGSHSVPPG*LWCTLV Trigger: GACCAGAGTACACCAGAGCCAGCCTGGAGGAACGCT...GTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGGGAAGGCCAAATTCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR TCA 90 bp | CTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTCCCCTTTATGTTCTCCAGGGCACTaGTGTAGAGGTGTACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LHSNCLQGKPPRIWPSPLCSPGH*CRGVLP Trigger: GGGCAGTACACCTCTACATCAGTGCCCTGGAGAACA...TAAAGGGGAAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGAATTTGGCCTTCCCCTTTAGTAGAAATGGGGTGAAATACGGCTCTCACAACTCCACAAGGCTGTaGTGCACACAGTACGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TKNLAFPFSRNGVKYGSHNSTRL*CTQYGA Trigger: TGCCCCGTACTGTGTGCACCACAGCCTTGTGGAGTT...GTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGGGAAGGCCAAATTCTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR TCA 90 bp | TCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTCTGAACTTCCAATGCTaGGCCATAAAAGTGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SVPSTVTAYRENHQEFGLLNFQC*AIKVVP Trigger: GGGGACCACTTTTATGGCTCAGCATTGGAAGTTCAG...AAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR GCA 90 bp | GAGTCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTAGCTCCGGATGTCACTaGCTTCTTCTACTAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ESSVPSTVTAYRENHQEFSSGCH*LLLLAA Trigger: GGCAGCTAGTAGAAGAAGGCAGTGACATCCGGAGCT...AAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR TCA 90 bp | GAGTCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGCTCCAAAAGTTTGCTaGGGAAACGGGAGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ESSVPSTVTAYRENHQEFAPKVC*GNGRSP Trigger: TGGAGATCTCCCGTTTCCTCAGCAAACTTTTGGAGC...AAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR TCA 90 bp | ACCAAGAATTTGGCCTTCCCCTTTAGTAGAAATGGGGTGAAATACGGCTCTCACGGTCTTGGCCTCCATTaGCAAAGTAGTCCACATGTC | + |
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Preference number: 4 (lower is better) Translates to: TKNLAFPFSRNGVKYGSHGLGLH*QSSPHV Trigger: GACATGTGGACTACTTTGTCAATGGAGGCCAAGACC...GTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGGGAAGGCCAAATTCTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR GCA 90 bp | TCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCGTAAAGAGGAGAAACTaGACCTTGAGGTTGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SSVPSTVTAYRENHQEFGVKRRN*TLRLVP Trigger: AGGCACCAACCTCAAGGTGCAGTTTCTCCTCTTTAC...GCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | TCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTGACACCAATGATGTaGATTGAGGACTCTGACACG | + |
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Preference number: 4 (lower is better) Translates to: SSVPSTVTAYRENHQEFGLTPMM*IEDSDT Trigger: CGTGTCAGAGTCCTCAATCCACATCATTGGTGTCAG...GCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | GAGTCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTACCCGGCTAGAAACTTaGAACTTGAGCTTCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: ESSVPSTVTAYRENHQEFTRLET*NLSFTW Trigger: CCAAGTGAAGCTCAAGTTCCAAGTTTCTAGCCGGGT...AAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR TCA 90 bp | GAGTCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTAGCGCCCTGAATCCATaGATAATTACTTTGGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ESSVPSTVTAYRENHQEFSALNP*IITLVP Trigger: GGGAACCAAAGTAATTATTCATGGATTCAGGGCGCT...AAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CCA 90 bp | GAGTCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTAACTTGAGCTTCACTTaGTTTATCTGGCACTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ESSVPSTVTAYRENHQEFNLSFT*FIWHCG Trigger: CCCACAGTGCCAGATAAACCAAGTGAAGCTCAAGTT...AAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR GCA 90 bp | CACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTCCCCTTTAGTAGATGTAGAGGTGTACTaGCCTCATGTGATCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: HSNCLQGKPPRIWPSPLVDVEVY*PHVITD Trigger: ATCTGTGATCACATGAGGGCAGTACACCTCTACATC...TACTAAAGGGGAAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR GCA 90 bp | ATAGAGAAGCTAAAAGGGCATTTATGTAAAGCGTTAGATGTTGGTGACGGAGATCAAGTAATTGTAACCTaGGTGAAAGAAGGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IEKLKGHLCKALDVGDGDQVIVT*VKEGRA Trigger: TGCCCTGCCTTCTTTCACGCAGGTTACAATTACTTG...ATCTCCGTCACCAACATCTAACGCTTTACATAAATGCCCTTTTAGCTTCTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS GCA 90 bp | CGGACAGGAGAGCAGGAAAGGGTTAAAGCAATCCAGACAGTCTCCTaGGAGGAAGGCCTTGTAGCTGGCACAGGGGAAGGCCATCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: RTGEQERVKAIQTVS*EEGLVAGTGEGHQW Trigger: CCACTGATGGCCTTCCCCTGTGCCAGCTACAAGGCCTTCCTCGCAGGAGACTGTCTGGATTGCTTTAACCCTTTCCTGCTCTCCTGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS GCA 90 bp | GCATTGAACTCAGAGCTCCGGATGTCACTGCCTTCTTCTACTAGCTaGCCACAGCTGGGGTCCGAGGGGGTAAAGAGGAGAAACTGCACC | + |
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Preference number: 5 (lower is better) Translates to: ALNSELRMSLPSSTS*PQLGSEGVKRRNCT Trigger: GGTGCAGTTTCTCCTCTTTACCCCCTCGGACCCCAGCTGTGGGCAGCTAGTAGAAGAAGGCAGTGACATCCGGAGCTCTGAGTTCAATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS TCA 90 bp | GAAACGGGAGATCTCCAGGCTCAGCTTGACCACATTCTCCACTGCTaGGTAGTACACGCCCGTAGAACCATAAACCCAGTCCACCGCGAT | + |
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Preference number: 5 (lower is better) Translates to: ETGDLQAQLDHILHC*VVHARRTINPVHRD Trigger: ATCGCGGTGGACTGGGTTTATGGTTCTACGGGCGTGTACTACTCAGCAGTGGAGAATGTGGTCAAGCTGAGCCTGGAGATCTCCCGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | GGTGAAATACGGCTCTCACAAACAGCTCTTGGCACACTGCCCTCGGAAAACTGCGTCTTCTTGCTGTCATaGACCGGCAGAGGGGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: GEIRLSQTALGTLPSENCVFLLS*TGRGAV Trigger: TACTGCCCCTCTGCCGGTCAATGACAGCAAGAAGAC...GCAGTTTTCCGAGGGCAGTGTGCCAAGAGCTGTTTGTGAGAGCCGTATTTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CCA 90 bp | GTCCAACAGGAATCCGGATACCCAAATTGTCCGTGTCTGTGTGGATaGCTTCTACAAACAGGGCGTCTCCAGCATCCAAGCGTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: VQQESGYPNCPCLCG*LLQTGRLQHPSVPP Trigger: TGGAGGAACGCTTGGATGCTGGAGACGCCCTGTTTGTAGAAGCCATCCACACAGACACGGACAATTTGGGTATCCGGATTCCTGTTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS TCA 90 bp | CTGCGTGAAAGAAGGCAGGGCATCCAGGCTGGTCTTGGCCTCCATTaGCAAAGTAGTCCACATGTCCAACAGGAATCCGGATACCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: LRERRQGIQAGLGLH*QSSPHVQQESGYPN Trigger: ATTTGGGTATCCGGATTCCTGTTGGACATGTGGACTACTTTGTCAATGGAGGCCAAGACCAGCCTGGATGCCCTGCCTTCTTTCACGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | GAGTCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTAACTGCACCTTGAGGTaGGTGCCTCGGAGGAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: ESSVPSTVTAYRENHQEFNCTLR*VPRRRL Trigger: CAACCTCCTCCGAGGCACCAACCTCAAGGTGCAGTT...AAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | TTGGCCTTCCCCTTTAGTAGAAATGGGGTGAAATACGGCTCTCACAAACAGCTCGTTCCCAGACTGGCATaGAACTCAGAGCTCCGGATG | + |
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Preference number: 5 (lower is better) Translates to: LAFPFSRNGVKYGSHKQLVPRLA*NSELRM Trigger: CATCCGGAGCTCTGAGTTCAATGCCAGTCTGGGAAC...GAGCTGTTTGTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGGGAAGGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS TCA 90 bp | TGGAACTTGAGCTTCACTTGGTTTATCTGGCACTGTGGGTTAGGATaGGCCATGACCCCTCTCCCTTCCAGTTGCTGTTTAGGTATGGTG | + |
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Preference number: 5 (lower is better) Translates to: WNLSFTWFIWHCGLG*AMTPLPSSCCLGMV Trigger: CACCATACCTAAACAGCAACTGGAAGGGAGAGGGGTCATGGCTCATCCTAACCCACAGTGCCAGATAAACCAAGTGAAGCTCAAGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | TCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCATCTCCAGGCTCAGCTaGACCACATTCTCCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: SSVPSTVTAYRENHQEFGISRLS*TTFSTA Trigger: AGCAGTGGAGAATGTGGTCAAGCTGAGCCTGGAGAT...GCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | TCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTGCATCCAGGCTGGTCTaGGCCTCCATTGACAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: SVPSTVTAYRENHQEFGLASRLV*ASIDKV Trigger: TACTTTGTCAATGGAGGCCAAGACCAGCCTGGATGC...AAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS GCA 90 bp | CATCAGTGGGCAGGTGTTCTCCAGGGCACTGATGTAGAGGTGTACTaGCCTCATGTGATCACAGATCAAGTAATTGTAACCTGCGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: HQWAGVLQGTDVEVY*PHVITDQVIVTCVK Trigger: TTTCACGCAGGTTACAATTACTTGATCTGTGATCACATGAGGGCAGTACACCTCTACATCAGTGCCCTGGAGAACACCTGCCCACTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CCA 90 bp | GCTAGAAACTTGGAACTTGAGCTTCACTTGGTTTATCTGGCACTGTaGGTTAGGATGAGCCATGACCCCTCTCCCTTCCAGTTGCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: ARNLELELHLVYLAL*VRMSHDPSPFQLLF Trigger: AAACAGCAACTGGAAGGGAGAGGGGTCATGGCTCATCCTAACCCACAGTGCCAGATAAACCAAGTGAAGCTCAAGTTCCAAGTTTCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | TCATCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCATCCGGATACCCAAATaGTCCGTGTCTGTGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: SSVPSTVTAYRENHQEFGIRIPK*SVSVWM Trigger: CATCCACACAGACACGGACAATTTGGGTATCCGGAT...GCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | TCTGTCCCCTCCACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTGAACTTGAGCTTCACTaGGTTTATCTGGCACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SVPSTVTAYRENHQEFGLELELH*VYLALW Trigger: CCACAGTGCCAGATAAACCAAGTGAAGCTCAAGTTC...AAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTGGAGGGGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | GCCTTCCCCTTTAGTAGAAATGGGGTGAAATACGGCTCTCACAAACAGCTCTTGAACCCGGCTAGAAACTaGGAACTTGAGCTTCACTTG | + |
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Preference number: 5 (lower is better) Translates to: AFPFSRNGVKYGSHKQLLNPARN*ELELHL Trigger: CAAGTGAAGCTCAAGTTCCAAGTTTCTAGCCGGGTT...CAAGAGCTGTTTGTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGGGAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS TCA 90 bp | AACTTGTCGATCCAAGAAGGCTTTGTTCCGAGCGCCCTGAATCCATaGATAATTACTTTGGTTCCCAGACTGGCATTGAACTCAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: NLSIQEGFVPSALNP*IITLVPRLALNSEL Trigger: GAGCTCTGAGTTCAATGCCAGTCTGGGAACCAAAGTAATTATTCATGGATTCAGGGCGCTCGGAACAAAGCCTTCTTGGATCGACAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | CACAGTAACTGCTTACAGGGAAAACCACCAAGAATTTGGCCTTCCCCTTTAGTACCCTCTCCCTTCCAGTaGCTGTTTAGGTATGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: HSNCLQGKPPRIWPSPLVPSPFQ*LFRYGD Trigger: ATCACCATACCTAAACAGCAACTGGAAGGGAGAGGG...TACTAAAGGGGAAGGCCAAATTCTTGGTGGTTTTCCCTGTAAGCAGTTACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | ACCAAGAATTTGGCCTTCCCCTTTAGTAGAAATGGGGTGAAATACGGCTCTCACACAGCGCTGATAAACTaGTCGATCCAAGAAGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: TKNLAFPFSRNGVKYGSHTALIN*SIQEGF Trigger: AAAGCCTTCTTGGATCGACAAGTTTATCAGCGCTGT...GTGAGAGCCGTATTTCACCCCATTTCTACTAAAGGGGAAGGCCAAATTCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS-3UTR CAA 90 bp | ATAGAGAAGCTAAAAGGGCATTTATGTAAAGCGTTAGATGTTGGTGACGGAGATCTAGAAACTTGGAACTaGAGCTTCACTTGGTTTATC | + |
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Preference number: 5 (lower is better) Translates to: IEKLKGHLCKALDVGDGDLETWN*SFTWFI Trigger: GATAAACCAAGTGAAGCTCAAGTTCCAAGTTTCTAG...ATCTCCGTCACCAACATCTAACGCTTTACATAAATGCCCTTTTAGCTTCTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS GCA 72 bp | CCACAGCTGGGGTCCGAGGGGGTAAAGAGGAGAAACTaGACCTTGAGGTTGGTGCCTCGGAGGAGGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PQLGSEGVKRRN*TLRLVPRRRLA Trigger: TGCCAACCTCCTCCGAGGCACCAACCTCAAGGTGCAGTTTCTCCTCTTTACCCCCTCGGACCCCAGCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CCA 72 bp | ACAGGGCGTCTCCAGCATCCAAGCGTTCCTCCAGGCTaGCTCTGGTGTACTCTGGTCCAGCAGGATCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: TGRLQHPSVPPG*LWCTLVQQDPD Trigger: GTCTGGATCCTGCTGGACCAGAGTACACCAGAGCCAGCCTGGAGGAACGCTTGGATGCTGGAGACGCCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CCA 72 bp | GAAGGCCTTGTAGCTGGCACAGGGGAAGGCCATCAGTaGGCAGGTGTTCTCCAGGGCACTGATGTAGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: EGLVAGTGEGHQ*AGVLQGTDVEV Trigger: CACCTCTACATCAGTGCCCTGGAGAACACCTGCCCACTGATGGCCTTCCCCTGTGCCAGCTACAAGGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS GCA 72 bp | TCAGAGCTCCGGATGTCACTGCCTTCTTCTACTAGCTaGCCACAGCTGGGGTCCGAGGGGGTAAAGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SELRMSLPSSTS*PQLGSEGVKRR Trigger: TCTCCTCTTTACCCCCTCGGACCCCAGCTGTGGGCAGCTAGTAGAAGAAGGCAGTGACATCCGGAGCTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 90 bp | ACGCCTGCTTGCAGACGCACTGGCTCAGGTATGCAGACCGTCTTCTaGCTGTCATTGACCGGCAGAGGGGCAGTACAGAAAGTCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: TPACRRTGSGMQTVF*LSLTGRGAVQKVPT Trigger: TGTTGGGACTTTCTGTACTGCCCCTCTGCCGGTCAATGACAGCAAGAAGACGGTCTGCATACCTGAGCCAGTGCGTCTGCAAGCAGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS GCA 72 bp | GCTATTTTCAGGTCCTGGAAAGCAGGCACGCCTGCTTaGAGACGCACTGGCTCAGGTATGCAGACCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AIFRSWKAGTPA*RRTGSGMQTVF Trigger: GAAGACGGTCTGCATACCTGAGCCAGTGCGTCTGCAAGCAGGCGTGCCTGCTTTCCAGGACCTGAAAATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CCA 72 bp | ATCCAAGCGTTCCTCCAGGCTGGCTCTGGTGTACTCTaGTCCAGCAGGATCCAGACCTGTGATCTGTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: IQAFLQAGSGVL*SSRIQTCDLSQ Trigger: TTGGGACAGATCACAGGTCTGGATCCTGCTGGACCAGAGTACACCAGAGCCAGCCTGGAGGAACGCTTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | TTAGCATCCGCAGCCCGCAGGACAGCGCTGATAAACTaGTCGATCCAAGAAGGCTTTGTTCCGAGCGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LASAARRTALIN*SIQEGFVPSAL Trigger: CAGGGCGCTCGGAACAAAGCCTTCTTGGATCGACAAGTTTATCAGCGCTGTCCTGCGGGCTGCGGATGCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS TCA 72 bp | GGAAGGCCATCAGTGGGCAGGTGTTCTCCAGGGCACTaGTGTAGAGGTGTACTGCCCTCATGTGATCACAGA | + |
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Preference number: 6 (lower is better) Translates to: GRPSVGRCSPGH*CRGVLPSCDHR Trigger: TCTGTGATCACATGAGGGCAGTACACCTCTACATCAGTGCCCTGGAGAACACCTGCCCACTGATGGCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | TGCAGACGCACTGGCTCAGGTATGCAGACCGTCTTCTaGCTGTCATTGACCGGCAGAGGGGCAGTACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: CRRTGSGMQTVF*LSLTGRGAVQK Trigger: TTTCTGTACTGCCCCTCTGCCGGTCAATGACAGCAAGAAGACGGTCTGCATACCTGAGCCAGTGCGTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS TCA 72 bp | GATAAACCTTCACTTCCTTGGGGAGCGGCTCAATCATaGCACCACCTCGTTCCACCAGTCCAATCCTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: DKPSLPWGAAQS*HHLVPPVQSSD Trigger: GTCCGAGGATTGGACTGGTGGAACGAGGTGGTGTCATGATTGAGCCGCTCCCCAAGGAAGTGAAGGTTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | TGGATTGAGGACTCTGACACGCCCAGCTCCAAAAGTTaGCTGAGGAAACGGGAGATCTCCAGGCTCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: WIEDSDTPSSKS*LRKREISRLSL Trigger: CAAGCTGAGCCTGGAGATCTCCCGTTTCCTCAGCAAACTTTTGGAGCTGGGCGTGTCAGAGTCCTCAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | ACCTGCGTGAAAGAAGGCAGGGCATCCAGGCTGGTCTaGGCCTCCATTGACAAAGTAGTCCACATGTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: TCVKEGRASRLV*ASIDKVVHMSN Trigger: GTTGGACATGTGGACTACTTTGTCAATGGAGGCCAAGACCAGCCTGGATGCCCTGCCTTCTTTCACGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | ACTGGCTCAGGTATGCAGACCGTCTTCTTGCTGTCATaGACCGGCAGAGGGGCAGTACAGAAAGTCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: TGSGMQTVFLLS*TGRGAVQKVPT Trigger: TGTTGGGACTTTCTGTACTGCCCCTCTGCCGGTCAATGACAGCAAGAAGACGGTCTGCATACCTGAGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CCA 72 bp | GAATCCGGATACCCAAATTGTCCGTGTCTGTGTGGATaGCTTCTACAAACAGGGCGTCTCCAGCATCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: ESGYPNCPCLCG*LLQTGRLQHPS Trigger: GCTTGGATGCTGGAGACGCCCTGTTTGTAGAAGCCATCCACACAGACACGGACAATTTGGGTATCCGGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CCA 72 bp | ACAGGAATCCGGATACCCAAATTGTCCGTGTCTGTGTaGATGGCTTCTACAAACAGGGCGTCTCCAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: TGIRIPKLSVSV*MASTNRASPAS Trigger: GGATGCTGGAGACGCCCTGTTTGTAGAAGCCATCCACACAGACACGGACAATTTGGGTATCCGGATTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | TGGGTTAGGATGAGCCATGACCCCTCTCCCTTCCAGTaGCTGTTTAGGTATGGTGATCTTGACCGAGGACGT | + |
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Preference number: 6 (lower is better) Translates to: WVRMSHDPSPFQ*LFRYGDLDRGR Trigger: ACGTCCTCGGTCAAGATCACCATACCTAAACAGCAACTGGAAGGGAGAGGGGTCATGGCTCATCCTAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 90 bp | CCAATGATGTGGATTGAGGACTCTGACACGCCCAGCTCCAAAAGTTaGCTGAGGAAACGGGAGATCTCCAGGCTCAGCTTGACCACATTC | + |
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Preference number: 6 (lower is better) Translates to: PMMWIEDSDTPSSKS*LRKREISRLSLTTF Trigger: GAATGTGGTCAAGCTGAGCCTGGAGATCTCCCGTTTCCTCAGCAAACTTTTGGAGCTGGGCGTGTCAGAGTCCTCAATCCACATCATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 90 bp | GTAATTGTAACCTGCGTGAAAGAAGGCAGGGCATCCAGGCTGGTCTaGGCCTCCATTGACAAAGTAGTCCACATGTCCAACAGGAATCCG | + |
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Preference number: 6 (lower is better) Translates to: VIVTCVKEGRASRLV*ASIDKVVHMSNRNP Trigger: CGGATTCCTGTTGGACATGTGGACTACTTTGTCAATGGAGGCCAAGACCAGCCTGGATGCCCTGCCTTCTTTCACGCAGGTTACAATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS TCA 72 bp | AGCTTCACTTGGTTTATCTGGCACTGTGGGTTAGGATaGGCCATGACCCCTCTCCCTTCCAGTTGCTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: SFTWFIWHCGLG*AMTPLPSSCCL Trigger: TAAACAGCAACTGGAAGGGAGAGGGGTCATGGCTCATCCTAACCCACAGTGCCAGATAAACCAAGTGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS GCA 72 bp | TGCCCTCATGTGATCACAGATCAAGTAATTGTAACCTaGGTGAAAGAAGGCAGGGCATCCAGGCTGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: CPHVITDQVIVT*VKEGRASRLVL Trigger: CAAGACCAGCCTGGATGCCCTGCCTTCTTTCACGCAGGTTACAATTACTTGATCTGTGATCACATGAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 90 bp | GTCTTTTCTCCAAACCCGGCTAGAAACTTGGAACTTGAGCTTCACTaGGTTTATCTGGCACTGTGGGTTAGGATGAGCCATGACCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VFSPNPARNLELELH*VYLALWVRMSHDPS Trigger: AGAGGGGTCATGGCTCATCCTAACCCACAGTGCCAGATAAACCAAGTGAAGCTCAAGTTCCAAGTTTCTAGCCGGGTTTGGAGAAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS GCA 72 bp | GCAGGTGTTCTCCAGGGCACTGATGTAGAGGTGTACTaGCCTCATGTGATCACAGATCAAGTAATTGTAACC | + |
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Preference number: 6 (lower is better) Translates to: AGVLQGTDVEVY*PHVITDQVIVT Trigger: GGTTACAATTACTTGATCTGTGATCACATGAGGGCAGTACACCTCTACATCAGTGCCCTGGAGAACACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | CCTCTCCCTTCCAGTTGCTGTTTAGGTATGGTGATCTaGACCGAGGACGTTACGTTGTTGCTAAGAAACGTG | + |
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Preference number: 6 (lower is better) Translates to: PLPSSCCLGMVI*TEDVTLLLRNV Trigger: CACGTTTCTTAGCAACAACGTAACGTCCTCGGTCAAGATCACCATACCTAAACAGCAACTGGAAGGGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | CCAAACCCGGCTAGAAACTTGGAACTTGAGCTTCACTaGGTTTATCTGGCACTGTGGGTTAGGATGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PNPARNLELELH*VYLALWVRMSH Trigger: ATGGCTCATCCTAACCCACAGTGCCAGATAAACCAAGTGAAGCTCAAGTTCCAAGTTTCTAGCCGGGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | TGTTTAGGTATGGTGATCTTGACCGAGGACGTTACGTaGTTGCTAAGAAACGTGACCTCGATGCTGGTATCC | + |
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Preference number: 6 (lower is better) Translates to: CLGMVILTEDVT*LLRNVTSMLVS Trigger: GGATACCAGCATCGAGGTCACGTTTCTTAGCAACAACGTAACGTCCTCGGTCAAGATCACCATACCTAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS TCA 72 bp | ATCCAAGAAGGCTTTGTTCCGAGCGCCCTGAATCCATaGATAATTACTTTGGTTCCCAGACTGGCATTGAAC | + |
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Preference number: 6 (lower is better) Translates to: IQEGFVPSALNP*IITLVPRLALN Trigger: GTTCAATGCCAGTCTGGGAACCAAAGTAATTATTCATGGATTCAGGGCGCTCGGAACAAAGCCTTCTTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | TTAGGTATGGTGATCTTGACCGAGGACGTTACGTTGTaGCTAAGAAACGTGACCTCGATGCTGGTATCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LGMVILTEDVTL*LRNVTSMLVSF Trigger: AAAGGATACCAGCATCGAGGTCACGTTTCTTAGCAACAACGTAACGTCCTCGGTCAAGATCACCATACCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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| CDS CAA 72 bp | CTGTCTTTTCTCCAAACCCGGCTAGAAACTTGGAACTaGAGCTTCACTTGGTTTATCTGGCACTGTGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LSFLQTRLETWN*SFTWFIWHCGL Trigger: TAACCCACAGTGCCAGATAAACCAAGTGAAGCTCAAGTTCCAAGTTTCTAGCCGGGTTTGGAGAAAAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002926.8 |
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