Pregenerated sensors for PKP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054065Ensembl transcript IDs: ENSMUST00000066873.5, ENSMUST00000106039.9, ENSMUST00000160869.2, ENSMUST00000163041.2
Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACGGCTGAGCGGGAGGACCAGGAAGCTGGGCTGTAGGCCGGCTTaGCGATGGGCCGGAAGGTCGAGGTCTTGTCTCCACTCATGCCCT | + |
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Preference number: 1 (lower is better) Translates to: PRLSGRTRKLGCRPA*RWAGRSRSCLHSCP Trigger: AGGGCATGAGTGGAGACAAGACCTCGACCTTCCGGCCCATCGCCAAGCCGGCCTACAGCCCAGCTTCCTGGTCCTCCCGCTCAGCCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR GCA 90 bp | CCCCAAAGGCACTGCCCCCATTGTGGGCAGAACTCAGCCTCCGACTaGACGTCAGATCCACGGCTGAGCGGGAGGACCAGGAAGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: PQRHCPHCGQNSASD*TSDPRLSGRTRKLG Trigger: GCCCAGCTTCCTGGTCCTCCCGCTCAGCCGTGGATCTGACGTGCAGTCGGAGGCTGAGTTCTGCCCACAATGGGGGCAGTGCCTTTGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR GCA 90 bp | CGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTaGCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: RHPVHQSSSSSTPFP*PAEANQSPVASACS Trigger: AGAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR GCA 90 bp | CCTCTGGGCATGCCCCTTGCCTCTGGTTCTGTCATGGCTGCAGCATaGCTTCATCCAGTCTGTTCTGGTAGATCCTCTTTCCCTAGAACT | + |
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Preference number: 1 (lower is better) Translates to: PLGMPLASGSVMAAA*LHPVCSGRSSFPRT Trigger: AGTTCTAGGGAAAGAGGATCTACCAGAACAGACTGGATGAAGGCATGCTGCAGCCATGACAGAACCAGAGGCAAGGGGCATGCCCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR GCA 90 bp | GAAGCCAGTCTGCATAGTGTGATATTGACCTCTGGGCATGCCCCTTaGCTCTGGTTCTGTCATGGCTGCAGCATGCCTTCATCCAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: EASLHSVILTSGHAP*LWFCHGCSMPSSSL Trigger: CAGACTGGATGAAGGCATGCTGCAGCCATGACAGAACCAGAGGCAAGGGGCATGCCCAGAGGTCAATATCACACTATGCAGACTGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR TCA 90 bp | CTGTGGCATCAGCTCCTCTTCTATGTGCTGTGGGACAGCAGGAGCTaGGCCTATCTCTTGGAAGCTGAATCACTTCATCTCCAGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LWHQLLFYVLWDSRS*AYLLEAESLHLQEA Trigger: AGCCTCCTGGAGATGAAGTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGAAGAGGAGCTGATGCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR CCA 90 bp | AGTCTGCATAGTGTGATATTGACCTCTGGGCATGCCCCTTGCCTCTaGTTCTGTCATGGCTGCAGCATGCCTTCATCCAGTCTGTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SLHSVILTSGHAPCL*FCHGCSMPSSSLFW Trigger: CCAGAACAGACTGGATGAAGGCATGCTGCAGCCATGACAGAACCAGAGGCAAGGGGCATGCCCAGAGGTCAATATCACACTATGCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR CCA 90 bp | TGTGATATTGACCTCTGGGCATGCCCCTTGCCTCTGGTTCTGTCATaGCTGCAGCATGCCTTCATCCAGTCTGTTCTGGTAGATCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: CDIDLWACPLPLVLS*LQHAFIQSVLVDPL Trigger: AAGAGGATCTACCAGAACAGACTGGATGAAGGCATGCTGCAGCCATGACAGAACCAGAGGCAAGGGGCATGCCCAGAGGTCAATATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGGCCGGAAGGTCGAGGTCTTGTCTCCACTCATGCCCTGGGATCGGGAGCTGTCTGGGCATGCCCCTTaGCTCTGGTTCTGTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: MGRKVEVLSPLMPWDRELSGHAP*LWFCHG Trigger: GCCATGACAGAACCAGAGGCAAGGGGCATGCCCAGA...CAGCTCCCGATCCCAGGGCATGAGTGGAGACAAGACCTCGACCTTCCGGCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAAAGGCACTGCCCCCATTGTGGGCAGAACTCAGCCTCCGACTGCACGTCAGATTGACCTCTGGGCATaGCCCTTGCCTCTGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PKGTAPIVGRTQPPTARQIDLWA*PLPLVL Trigger: CAGAACCAGAGGCAAGGGGCATGCCCAGAGGTCAAT...CTGACGTGCAGTCGGAGGCTGAGTTCTGCCCACAATGGGGGCAGTGCCTTTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR CAA 90 bp | CATGCCCTGGGATCGGGAGCTGAAGCCAGTCTGCATAGTGTGATATaGACCTCTGGGCATGCCCCTTGCCTCTGGTTCTGTCATGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HALGSGAEASLHSVI*TSGHAPCLWFCHGC Trigger: GCAGCCATGACAGAACCAGAGGCAAGGGGCATGCCCAGAGGTCAATATCACACTATGCAGACTGGCTTCAGCTCCCGATCCCAGGGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCTGGGACAGCAGGAGCTaGGCCTATCTCTTGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFWDSRS*AYLLEA Trigger: AGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCA...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR-3UTR GCA 90 bp | CCGGAAGGTCGAGGTCTTGTCTCCACTCATGCCCTGGGATCGGGAGCTGAAGCCGTCATGGCTGCAGCATaGCTTCATCCAGTCTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: PEGRGLVSTHALGSGAEAVMAAA*LHPVCS Trigger: AGAACAGACTGGATGAAGGCATGCTGCAGCCATGAC...GGCTTCAGCTCCCGATCCCAGGGCATGAGTGGAGACAAGACCTCGACCTTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR-3UTR GCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGAGCTCCTCTTCTATGTaGTGTGGGACAGCAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: AHTQDSREEREREREVLWSSSSM*CGTAGA Trigger: AGCTCCTGCTGTCCCACAGCACATAGAAGAGGAGCT...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR-3UTR GCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCAGCTCCTCTTCTATGTaGTGTGGGACAGCAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: HTHRTPERRERERERSCGSSSSM*CGTAGA Trigger: AGCTCCTGCTGTCCCACAGCACATAGAAGAGGAGCT...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCGAGAGAGAGGTCCTGTaGCATCAGCTCCTCTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFEREVL*HQLLFY Trigger: ATAGAAGAGGAGCTGATGCCACAGGACCTCTCTCTC...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTGCTGAGCCTATCTCTTaGAAGCTGAATCACTTCATC | + |
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Preference number: 2 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPAEPIS*KLNHFI Trigger: GATGAAGTGATTCAGCTTCCAAGAGATAGGCTCAGC...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR-3UTR CCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGCTGAGCCTATCTCTTaGAAGCTGAATCACTTCATC | + |
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Preference number: 2 (lower is better) Translates to: AHTQDSREEREREREVLWAEPIS*KLNHFI Trigger: GATGAAGTGATTCAGCTTCCAAGAGATAGGCTCAGC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTGAGAGAGAGGTCCTGTaGCATCAGCTCCTCTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFEREVL*HQLLFY Trigger: ATAGAAGAGGAGCTGATGCCACAGGACCTCTCTCTC...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR CCA 72 bp | AGCGGGAGGACCAGGAAGCTGGGCTGTAGGCCGGCTTaGCGATGGGCCGGAAGGTCGAGGTCTTGTCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: SGRTRKLGCRPA*RWAGRSRSCLH Trigger: GTGGAGACAAGACCTCGACCTTCCGGCCCATCGCCAAGCCGGCCTACAGCCCAGCTTCCTGGTCCTCCCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR TCA 72 bp | AGAACTCAGCCTCCGACTGCACGTCAGATCCACGGCTaGGCGGGAGGACCAGGAAGCTGGGCTGTAGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: RTQPPTARQIHG*AGGPGSWAVGR Trigger: CCGGCCTACAGCCCAGCTTCCTGGTCCTCCCGCTCAGCCGTGGATCTGACGTGCAGTCGGAGGCTGAGTTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR GCA 72 bp | CACTGCCCCCATTGTGGGCAGAACTCAGCCTCCGACTaGACGTCAGATCCACGGCTGAGCGGGAGGACCAGG | + |
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Preference number: 3 (lower is better) Translates to: HCPHCGQNSASD*TSDPRLSGRTR Trigger: CCTGGTCCTCCCGCTCAGCCGTGGATCTGACGTGCAGTCGGAGGCTGAGTTCTGCCCACAATGGGGGCAGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGATCCACGGCTGAGCGGGAGGACCAGGAAGCTGGGCTGTAGGCCGGCTTGGCGGAAGGTCGAGGTCTaGTCTCCACTCATGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: SDPRLSGRTRKLGCRPAWRKVEV*SPLMPW Trigger: CCAGGGCATGAGTGGAGACAAGACCTCGACCTTCCG...CCAAGCCGGCCTACAGCCCAGCTTCCTGGTCCTCCCGCTCAGCCGTGGATCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR CCA 72 bp | AGGACCAGGAAGCTGGGCTGTAGGCCGGCTTGGCGATaGGCCGGAAGGTCGAGGTCTTGTCTCCACTCATGC | + |
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Preference number: 3 (lower is better) Translates to: RTRKLGCRPAWR*AGRSRSCLHSC Trigger: GCATGAGTGGAGACAAGACCTCGACCTTCCGGCCCATCGCCAAGCCGGCCTACAGCCCAGCTTCCTGGTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR GCA 72 bp | CTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTaGAAGCGCCTGTTCTTTTCTGGTGGCCCTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: LSLPCRSQSIPS*KRLFFSGGPGP Trigger: GGGGCCAGGGCCACCAGAAAAGAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR GCA 72 bp | CCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTaGAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTG | + |
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Preference number: 3 (lower is better) Translates to: PEQLKLYPLSLP*RSQSIPSCKRL Trigger: CAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR GCA 72 bp | GTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTaGCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: VHQSSSSSTPFP*PAEANQSPVAS Trigger: GCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR CCA 72 bp | GACCTCTGGGCATGCCCCTTGCCTCTGGTTCTGTCATaGCTGCAGCATGCCTTCATCCAGTCTGTTCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: DLWACPLPLVLS*LQHAFIQSVLV Trigger: TACCAGAACAGACTGGATGAAGGCATGCTGCAGCCATGACAGAACCAGAGGCAAGGGGCATGCCCAGAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR GCA 72 bp | AGAGAGAGGTCCTGTGGCATCAGCTCCTCTTCTATGTaGTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: RERSCGISSSSM*CGTAGAEPISW Trigger: CCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGAAGAGGAGCTGATGCCACAGGACCTCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR CCA 72 bp | TCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTaGCATCAGCTCCTCTTCTATGTGCTGTGGGACAGC | + |
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Preference number: 3 (lower is better) Translates to: SREEREREREVL*HQLLFYVLWDS Trigger: GCTGTCCCACAGCACATAGAAGAGGAGCTGATGCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR GCA 72 bp | CTGCATAGTGTGATATTGACCTCTGGGCATGCCCCTTaGCTCTGGTTCTGTCATGGCTGCAGCATGCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: LHSVILTSGHAP*LWFCHGCSMPS Trigger: TGAAGGCATGCTGCAGCCATGACAGAACCAGAGGCAAGGGGCATGCCCAGAGGTCAATATCACACTATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR CCA 72 bp | AGTGTGATATTGACCTCTGGGCATGCCCCTTGCCTCTaGTTCTGTCATGGCTGCAGCATGCCTTCATCCAGT | + |
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Preference number: 3 (lower is better) Translates to: SVILTSGHAPCL*FCHGCSMPSSS Trigger: ACTGGATGAAGGCATGCTGCAGCCATGACAGAACCAGAGGCAAGGGGCATGCCCAGAGGTCAATATCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR GCA 72 bp | ATGCCCCTTGCCTCTGGTTCTGTCATGGCTGCAGCATaGCTTCATCCAGTCTGTTCTGGTAGATCCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: MPLASGSVMAAA*LHPVCSGRSSF Trigger: GAAAGAGGATCTACCAGAACAGACTGGATGAAGGCATGCTGCAGCCATGACAGAACCAGAGGCAAGGGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| 3UTR CCA 72 bp | ATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTaGAAGCTGAATCACTTCATCTCCAGGAGGCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: MCCGTAGAEPIS*KLNHFISRRLH Trigger: GTGAAGCCTCCTGGAGATGAAGTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR TCA 72 bp | CAGCTCCTCTTCTATGTGCTGTGGGACAGCAGGAGCTaGGCCTATCTCTTGGAAGCTGAATCACTTCATCTC | + |
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Preference number: 3 (lower is better) Translates to: QLLFYVLWDSRS*AYLLEAESLHL Trigger: GAGATGAAGTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGAAGAGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | GTAGGCCGGCTTGGCGATGGGCCGGAAGGTCGAGGTCTTGTCTCCACTCATGCCCCTCTGGGCTGCCTCTaGCGCTCTCCGCGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VGRLGDGPEGRGLVSTHAPLGCL*RSPRSH Trigger: ATGGCTCCGCGGAGAGCGCCAGAGGCAGCCCAGAGG...GGCATGAGTGGAGACAAGACCTCGACCTTCCGGCCCATCGCCAAGCCGGCCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| CDS-3UTR GCA 90 bp | TCAGATCCACGGCTGAGCGGGAGGACCAGGAAGCTGGGCTGTAGGCCGGCTTGGAGGCGGGCTCGGACTTaGTCCTGGACTCTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SDPRLSGRTRKLGCRPAWRRART*SWTLAA Trigger: AGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCT...CCAAGCCGGCCTACAGCCCAGCTTCCTGGTCCTCCCGCTCAGCCGTGGATCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| CDS-3UTR GCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTGCGGCTCAGCACACCTaGCCACCTGCGGTCGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPAAQHT*PPAVAR Trigger: GCGGGCGACCGCAGGTGGGCAGGTGTGCTGAGCCGC...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CCCAAAGGCACTGCCCCCATTGTGGGCAGAACTCAGCCTCCGACTGCACGTCAGTTGTGCCGCGACTGCTaGCCCAGCTGCAGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PKGTAPIVGRTQPPTARQLCRDC*PSCRRR Trigger: CCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAA...CTGACGTGCAGTCGGAGGCTGAGTTCTGCCCACAATGGGGGCAGTGCCTTTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| CDS-3UTR GCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCACCAGGCGGAGCCCCTaGCATGTCCCTGCGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGTRRSP*HVPAAP Trigger: CGGGGCCGCAGGGACATGGCAGGGGCTCCGCCTGGT...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCTTGTGCCGCGACTGCTaGCCCAGCTGCAGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFLCRDC*PSCRRR Trigger: CCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAA...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTTTGTGCCGCGACTGCTaGCCCAGCTGCAGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPLCRDC*PSCRRR Trigger: CCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAA...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTGGCTGTAGGCCGGCTTaGCGATGGGCCGGAAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPGCRPA*RWAGRS Trigger: CGACCTTCCGGCCCATCGCCAAGCCGGCCTACAGCC...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCCGGGTGGGCATAGGTaGAGTGGGCTGGGTACCCCC | + |
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Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPPGGHR*SGLGTP Trigger: GGGGGTACCCAGCCCACTCCACCTATGCCCACCCGG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCCCGGGTGGGCATAGGTaGAGTGGGCTGGGTACCCCC | + |
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Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFPGGHR*SGLGTP Trigger: GGGGGTACCCAGCCCACTCCACCTATGCCCACCCGG...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCGAGGCTGCGCACAGATaGGGCTCGGGCCACTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFEAAHR*GSGHWL Trigger: GAGCCAGTGGCCCGAGCCCCATCTGTGCGCAGCCTC...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | GACTGCACGTCAGATCCACGGCTGAGCGGGAGGACCAGGAAGCTGGGCTGTAGGTTCAGACCTGACCTCTaGGCTGCCTCTGGCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: DCTSDPRLSGRTRKLGCRFRPDL*AASGAL Trigger: GAGAGCGCCAGAGGCAGCCCAGAGGTCAGGTCTGAA...CCTACAGCCCAGCTTCCTGGTCCTCCCGCTCAGCCGTGGATCTGACGTGCAGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| CDS-3UTR GCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGACTGCTGGCCCAGCTaGAGGAGGCGGGCTCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWDCWPS*RRRART Trigger: AGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCCATTGTGCCGCGACTaGTGGCCCAGCTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPPLCRD*WPSCRR Trigger: CCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCCTGTGGCGTGGCGCTaGACCTCCTGGTTGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGPVAWR*TSWLAW Trigger: CCACGCCAACCAGGAGGTGCAGCGCCACGCCACAGG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGGCTGTAGGCCGGCTTaGCGATGGGCCGGAAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGGCRPA*RWAGRS Trigger: CGACCTTCCGGCCCATCGCCAAGCCGGCCTACAGCC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGAGGCTGCGCACAGATaGGGCTCGGGCCACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGEAAHR*GSGHWL Trigger: GAGCCAGTGGCCCGAGCCCCATCTGTGCGCAGCCTC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTTGCGCATGGCACCTGTaGCGTGGCGCTGCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPCAWHL*RGAAPP Trigger: AGGAGGTGCAGCGCCACGCCACAGGTGCCATGCGCA...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGTCAGATCCACGGCTaGGCGGGAGGACCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWRQIHG*AGGPGS Trigger: GCTTCCTGGTCCTCCCGCTCAGCCGTGGATCTGACG...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCGCAGCCGCCGACTCTaGGGTGTGAAGCAGCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGRSRRL*GVKQPT Trigger: GGTAGGCTGCTTCACACCTCAGAGTCGGCGGCTGCG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGCAGCCGCCGACTCTaGGGTGTGAAGCAGCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWRSRRL*GVKQPT Trigger: GGTAGGCTGCTTCACACCTCAGAGTCGGCGGCTGCG...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCAGGCGGGCTCGGACTTaGTCCTGGACTCTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFRRART*SWTLAA Trigger: AGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCT...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCATTGTGCCGCGACTaGTGGCCCAGCTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWPLCRD*WPSCRR Trigger: CCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGG...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCGTGCACGGATGGTCCTaGTGGGTGGTCCCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFVHGWS*WVVPLW Trigger: CCACAGAGGGACCACCCAGCAGGACCATCCGTGCAC...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTGGTTCGCATGGCAGGTaGACGGATGGTCCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPGSHGR*TDGPAG Trigger: CCCAGCAGGACCATCCGTGCACCTGCCATGCGAACC...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCCGGCCTTCAAGCCGCTaGAAGGCTGATGGCGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFRPSSR*KADGGI Trigger: GATGCCGCCATCAGCCTTGCAGCGGCTTGAAGGCCG...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACACCAGGCGGAGCCCCTaGCATGTCCCTGCGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHTRRSP*HVPAAP Trigger: CGGGGCCGCAGGGACATGGCAGGGGCTCCGCCTGGT...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACGCGGCTCAGCACACCTaGCCACCTGCGGTCGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHAAQHT*PPAVAR Trigger: GCGGGCGACCGCAGGTGGGCAGGTGTGCTGAGCCGC...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGAGGCCGGCTTGGCGATaGGCCGGAAGGTCGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWRPAWR*AGRSRS Trigger: AGACCTCGACCTTCCGGCCCATCGCCAAGCCGGCCT...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGGAGGACCAGGAAGCTaGGCTGTAGGCCGGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGGGPGS*AVGRLG Trigger: GCCAAGCCGGCCTACAGCCCAGCTTCCTGGTCCTCC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGCCCCACCTCGCTCATaGAAGGACACTGGCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGAPPRS*KDTGRV Trigger: CACCCGGCCAGTGTCCTTCCATGAGCGAGGTGGGGC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGCCCCACCTCGCTCATaGAAGGACACTGGCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWAPPRS*KDTGRV Trigger: CACCCGGCCAGTGTCCTTCCATGAGCGAGGTGGGGC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTGATGGTCCTGCTGGGTaGTCCCTCTGTGGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPDGPAG*SLCGLW Trigger: CCAGAGGCCACAGAGGGACCACCCAGCAGGACCATC...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCGATGGTCCTGCTGGGTaGTCCCTCTGTGGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFDGPAG*SLCGLW Trigger: CCAGAGGCCACAGAGGGACCACCCAGCAGGACCATC...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTTGGCAGGTGCACGGATaGTCCTGCTGGGTGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPWQVHG*SCWVVP Trigger: AGGGACCACCCAGCAGGACCATCCGTGCACCTGCCA...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCCCCCACTGGCTCCCTaGCTCATTCTGGAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPPPLAP*LILEVP Trigger: AGGGACCTCCAGAATGAGCCAGGGAGCCAGTGGGGG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | TCGGGAGCTGAAGCCAGTCTGCATAGTGTGATATTGACCTCTGGGCATGCCCCTCCATTGTGCCGCGACTaGTGGCCCAGCTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGAEASLHSVILTSGHAPPLCRD*WPSCRR Trigger: CCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGG...AGGGGCATGCCCAGAGGTCAATATCACACTATGCAGACTGGCTTCAGCTCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| CDS-3UTR GCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCCAGCCCCAAAGGCACTaGCCCCATTGTGGGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFQPQRH*PHCGQN Trigger: GTTCTGCCCACAATGGGGGCAGTGCCTTTGGGGCTG...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGGTTCGCATGGCAGGTaGACGGATGGTCCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWGSHGR*TDGPAG Trigger: CCCAGCAGGACCATCCGTGCACCTGCCATGCGAACC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGCACTGCCTGAAGGCTaGGAGCCTGCTTCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWALPEG*EPASWR Trigger: CCGCCAAGAAGCAGGCTCGCAGCCTTCAGGCAGTGC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGCACTGCCTGAAGGCTaGGAGCCTGCTTCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGALPEG*EPASWR Trigger: CCGCCAAGAAGCAGGCTCGCAGCCTTCAGGCAGTGC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTGCCTCTGAGGCATTCTaGTGGATGAGGGGAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPASEAF*WMRGGP Trigger: TGGGCCTCCCCTCATCCAGCAGAATGCCTCAGAGGC...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGGCCTTCAAGCCGCTaGAAGGCTGATGGCGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWRPSSR*KADGGI Trigger: GATGCCGCCATCAGCCTTGCAGCGGCTTGAAGGCCG...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTTTCTGCCGAGTGGCCTaGGAGGCTGAGCTGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPFCRVA*EAELRF Trigger: GAACCTCAGCTCAGCCTCCCAGGCCACTCGGCAGAA...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTGACCAGCACCTCAGCTaGGGGACACTTCTCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPDQHLS*GTLLTH Trigger: GTGGGTGAGAAGTGTCCCCCAGCTGAGGTGCTGGTC...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGGTTGGCCAAGAGGCTaGAGGCTGCCCGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGGWPRG*RLPGKT Trigger: AGTCTTCCCGGGCAGCCTCCAGCCTCTTGGCCAACC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGGTTGGCCAAGAGGCTaGAGGCTGCCCGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWGWPRG*RLPGKT Trigger: AGTCTTCCCGGGCAGCCTCCAGCCTCTTGGCCAACC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCTGGTCTGGCCCCCACTaGCTCCCTGGCTCATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGWSGPH*LPGSFW Trigger: CCAGAATGAGCCAGGGAGCCAGTGGGGGCCAGACCA...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106039.9 |
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| 3UTR CAA 72 bp | CCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTaGCAAGCGCCTGTTCTTTTCTGGTGGCCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFPALQKPINPQ*QAPVLFWWPWP Trigger: GGGCCAGGGCCACCAGAAAAGAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCCTGCAGGTTGGGGTCTaGGGCCATGAGGTACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFLQVGV*GHEVLD Trigger: GTCAAGTACCTCATGGCCTCAGACCCCAACCTGCAG...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCAAGCCGCTGCAAGGCTaGTGGCGGCATCTCGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGKPLQG*WRHLVV Trigger: TACGACGAGATGCCGCCATCAGCCTTGCAGCGGCTT...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCGATGAGGCCAGTCAGTaGGCGCAGTTGGTTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFDEASQ*AQLVVV Trigger: GACCACAACCAACTGCGCTCACTGACTGGCCTCATC...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCGAGACAGGTTTCGGATaGGGCCAGTCAGTGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFETGFG*GQSVSA Trigger: TGCGCTCACTGACTGGCCTCATCCGAAACCTGTCTC...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTGACTGCTGGCCCAGCTaGAGGAGGCGGGCTCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFDCWPS*RRRART Trigger: AGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTC...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCAACTCAGCCTCCGACTaGACGTCAGATCCACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFNSASD*TSDPRL Trigger: CAGCCGTGGATCTGACGTGCAGTCGGAGGCTGAGTT...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCAGCCCCAAAGGCACTaGCCCCATTGTGGGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGQPQRH*PHCGQN Trigger: GTTCTGCCCACAATGGGGGCAGTGCCTTTGGGGCTG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCTGTCATAGTCAGCTCTaGTGGCTGCCCCACCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFCHSQL*WLPHLA Trigger: AGCGAGGTGGGGCAGCCAGCAGAGCTGACTATGACA...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCACCAGTCTAGGCACTaGCTGAAGGCTGCGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGHQSRH*LKAASL Trigger: CAGGCTCGCAGCCTTCAGGCAGTGCCTAGACTGGTG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCTGTGGCGTGGCGCTaGACCTCCTGGTTGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFPVAWR*TSWLAW Trigger: CCACGCCAACCAGGAGGTGCAGCGCCACGCCACAGG...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGCCTCTGAGGCATTCTaGTGGATGAGGGGAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWASEAF*WMRGGP Trigger: TGGGCCTCCCCTCATCCAGCAGAATGCCTCAGAGGC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCTCATGGAAGGACACTaGCCGGGTGGGCATAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGLMEGH*PGGHRW Trigger: CCACCTATGCCCACCCGGCCAGTGTCCTTCCATGAG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCTTTGCAGGGTTCGCATaGCAGGTGCACGGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFFAGFA*QVHGWS Trigger: GGACCATCCGTGCACCTGCCATGCGAACCCTGCAAA...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCGTACATCTGGCAGGTaGCCTGAGTCAGCCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPRTSGR*PESARL Trigger: TAGCCTGGCTGACTCAGGCCACCTGCCAGATGTACG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCTGCGAGCCTGCTTCTTaGCGGCGGCATCACTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFCEPAS*RRHHCN Trigger: GTTACAGTGATGCCGCCGCCAAGAAGCAGGCTCGCA...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCTGGCGCTGCACCTCCTaGTTGGCGTGGTTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGWRCTS*LAWLKS Trigger: GCTCTTCAACCACGCCAACCAGGAGGTGCAGCGCCA...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCTTCTGCCGAGTGGCCTaGGAGGCTGAGCTGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGFCRVA*EAELRF Trigger: GAACCTCAGCTCAGCCTCCCAGGCCACTCGGCAGAA...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCGCATCCACTAGCCCATaGCACTCGCGCATCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFASTSP*HSRIFC Trigger: GCAGAAGATGCGCGAGTGCCATGGGCTAGTGGATGC...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGCCCGGAAGTCACGGTaGAGCTTGCTGTACTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGARKSR*SLLYCQ Trigger: CTGGCAGTACAGCAAGCTCCACCGTGACTTCCGGGC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCGTCAGATCCACGGCTaGGCGGGAGGACCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFRQIHG*AGGPGS Trigger: GCTTCCTGGTCCTCCCGCTCAGCCGTGGATCTGACG...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCTTCGGTGGCTGCTCTaGAATCTTTGCAGGGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPLRWLL*NLCRVR Trigger: GCGAACCCTGCAAAGATTTCAGAGCAGCCACCGAAG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCATCAAAGCCACTGCTaGGCCTCTGCAGGGTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPHQSHC*ASAGFD Trigger: ATCGAACCCTGCAGAGGCTCAGCAGTGGCTTTGATG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCCATCAAAGCCACTGCTaGGCCTCTGCAGGGTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFHQSHC*ASAGFD Trigger: ATCGAACCCTGCAGAGGCTCAGCAGTGGCTTTGATG...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTAGGCATTCTGCTGGATaGGGGGAGGCCCACCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFRHSAG*GEAHLP Trigger: GGGCAGGTGGGCCTCCCCTCATCCAGCAGAATGCCT...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGAGACAGGTTTCGGATaGGGCCAGTCAGTGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWETGFG*GQSVSA Trigger: TGCGCTCACTGACTGGCCTCATCCGAAACCTGTCTC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGTGTCATAGTCAGCTCTaGTGGCTGCCCCACCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWCHSQL*WLPHLA Trigger: AGCGAGGTGGGGCAGCCAGCAGAGCTGACTATGACA...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCCACGGCTTCGGTGGCTaGTCTGAAATCTTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFHGFGG*SEIFAG Trigger: CCCTGCAAAGATTTCAGAGCAGCCACCGAAGCCGTG...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTGTGCTGGATGTAAGCTaGTCCCAGCACCTGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPVLDVS*SQHLQV Trigger: AACCTGCAGGTGCTGGGAGCAGCTTACATCCAGCAC...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCAGTCACGGTGGAGCTTaGTGTACTGCCAGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFSHGGA*CTARGW Trigger: CCAACCTCTGGCAGTACAGCAAGCTCCACCGTGACT...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACCACCAGTCTCAGGCTTaGCGCTGGTCTGGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHHQSQA*RWSGPH Trigger: GTGGGGGCCAGACCAGCGGCAAGCCTGAGACTGGTG...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTAGGCCGGCTTGGCGATaGGCCGGAAGGTCGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFRPAWR*AGRSRS Trigger: AGACCTCGACCTTCCGGCCCATCGCCAAGCCGGCCT...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACGGAGGACCAGGAAGCTaGGCTGTAGGCCGGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHGGPGS*AVGRLG Trigger: GCCAAGCCGGCCTACAGCCCAGCTTCCTGGTCCTCC...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCATAGGTGGAGTGGGCTaGGTACCCCCATATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFIGGVG*VPPYPT Trigger: TGTGGGATATGGGGGTACCCAGCCCACTCCACCTAT...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGTTTGCAGGGTTCGCATaGCAGGTGCACGGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWFAGFA*QVHGWS Trigger: GGACCATCCGTGCACCTGCCATGCGAACCCTGCAAA...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCGTACATCTGGCAGGTaGCCTGAGTCAGCCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGRTSGR*PESARL Trigger: TAGCCTGGCTGACTCAGGCCACCTGCCAGATGTACG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTTGCGCATGGCACCTGTaGCGTGGCGCTGCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFCAWHL*RGAAPP Trigger: AGGAGGTGCAGCGCCACGCCACAGGTGCCATGCGCA...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCAGGCGGTCCTTTAGGTaGTCACTGGAGGACAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFRRSFR*SLEDRF Trigger: GAACCTGTCCTCCAGTGACCACCTAAAGGACCGCCT...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGCATCCACTAGCCCATaGCACTCGCGCATCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWASTSP*HSRIFC Trigger: GCAGAAGATGCGCGAGTGCCATGGGCTAGTGGATGC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCTACATTGTCGTAGATaGGGTTGCGCATGGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPLHCRR*GCAWHL Trigger: CAGGTGCCATGCGCAACCTCATCTACGACAATGTAG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCCTACATTGTCGTAGATaGGGTTGCGCATGGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFLHCRR*GCAWHL Trigger: CAGGTGCCATGCGCAACCTCATCTACGACAATGTAG...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR TCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGCCGACTCTGAGGTGTaGAGCAGCCTACCATTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGADSEV*SSLPFH Trigger: GTGAAATGGTAGGCTGCTTCACACCTCAGAGTCGGC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACAGGCGGGCTCGGACTTaGTCCTGGACTCTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHRRART*SWTLAA Trigger: AGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCT...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGTGCTGGATGTAAGCTaGTCCCAGCACCTGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGVLDVS*SQHLQV Trigger: AACCTGCAGGTGCTGGGAGCAGCTTACATCCAGCAC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCGTAGCTCATCATCCTaGTCTCGAAGTGTCCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPRSSSS*SRSVRN Trigger: GTTGCGGACACTTCGAGAGCAGGATGATGAGCTACG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR GCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACCACTCGCGCATCTTCTaGCGAGTGGCCTGGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHHSRIF*RVAWEA Trigger: AGCCTCCCAGGCCACTCGGCAGAAGATGCGCGAGTG...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCTGTGATATTGACCTCTaGGCATGCCTCTGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFCDIDL*ACLWRS Trigger: AGAGCGCCAGAGGCATGCCCAGAGGTCAATATCACA...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTTGGCAGGTGCACGGATaGTCCTGCTGGGTGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFWQVHG*SCWVVP Trigger: AGGGACCACCCAGCAGGACCATCCGTGCACCTGCCA...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACATGGCACCTGTGGCGTaGCGCTGCACCTCCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHMAPVA*RCTSWL Trigger: CAACCAGGAGGTGCAGCGCCACGCCACAGGTGCCAT...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTATGGCACCTGTGGCGTaGCGCTGCACCTCCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFMAPVA*RCTSWL Trigger: CAACCAGGAGGTGCAGCGCCACGCCACAGGTGCCAT...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGAGGCGGTCCTTTAGGTaGTCACTGGAGGACAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWRRSFR*SLEDRF Trigger: GAACCTGTCCTCCAGTGACCACCTAAAGGACCGCCT...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCGAGGTACTTGACTGCTaGAGGCAGGTCAATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFEVLDC*RQVNVI Trigger: GATGACATTGACCTGCCTTCAGCAGTCAAGTACCTC...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTAAGCCGCTGCAAGGCTaGTGGCGGCATCTCGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFKPLQG*WRHLVV Trigger: TACGACGAGATGCCGCCATCAGCCTTGCAGCGGCTT...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACCACCAGTCTAGGCACTaGCTGAAGGCTGCGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHHQSRH*LKAASL Trigger: CAGGCTCGCAGCCTTCAGGCAGTGCCTAGACTGGTG...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCGTAGCTCATCATCCTaGTCTCGAAGTGTCCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGRSSSS*SRSVRN Trigger: GTTGCGGACACTTCGAGAGCAGGATGATGAGCTACG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTTTCGGCAAAGGTGAGTaGATCAGCTGTGAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPFGKGE*ISCERK Trigger: CTTCCTCTCACAGCTGATGCACTCACCTTTGCCGAA...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGTGTGATATTGACCTCTaGGCATGCCTCTGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWCDIDL*ACLWRS Trigger: AGAGCGCCAGAGGCATGCCCAGAGGTCAATATCACA...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTGCACTGCCCCCATTGTaGGCAGAACTCAGCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFALPPL*AELSLR Trigger: TCGGAGGCTGAGTTCTGCCCACAATGGGGGCAGTGC...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACGCACTGCCCCCATTGTaGGCAGAACTCAGCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHALPPL*AELSLR Trigger: TCGGAGGCTGAGTTCTGCCCACAATGGGGGCAGTGC...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACCTCATGGAAGGACACTaGCCGGGTGGGCATAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHLMEGH*PGGHRW Trigger: CCACCTATGCCCACCCGGCCAGTGTCCTTCCATGAG...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACTGGCGCTGCACCTCCTaGTTGGCGTGGTTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHWRCTS*LAWLKS Trigger: GCTCTTCAACCACGCCAACCAGGAGGTGCAGCGCCA...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTTCTCGTCCTTGTTCCTaGCATTCCGAGACAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPSRPCS*HSETGF Trigger: GAAACCTGTCTCGGAATGCCAGGAACAAGGACGAGA...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTGACCAGCACCTCAGCTaGGGGACACTTCTCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFDQHLS*GTLLTH Trigger: GTGGGTGAGAAGTGTCCCCCAGCTGAGGTGCTGGTC...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| 3UTR CAA 72 bp | GGATCGGGAGCTGAAGCCAGTCTGCATAGTGTGATATaGACCTCTGGGCATGCCCCTTGCCTCTGGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGAEASLHSVI*TSGHAPCLWFC Trigger: ACAGAACCAGAGGCAAGGGGCATGCCCAGAGGTCAATATCACACTATGCAGACTGGCTTCAGCTCCCGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| CDS-3UTR TCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACATCTGGCAGGTGGCCTaGGTCAGCCAGGCTAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHIWQVA*VSQAKT Trigger: AGTCTTAGCCTGGCTGACTCAGGCCACCTGCCAGAT...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGAGGTACTTGACTGCTaGAGGCAGGTCAATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWEVLDC*RQVNVI Trigger: GATGACATTGACCTGCCTTCAGCAGTCAAGTACCTC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCTGCAGGTTGGGGTCTaGGGCCATGAGGTACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFLQVGV*GHEVLD Trigger: GTCAAGTACCTCATGGCCTCAGACCCCAACCTGCAG...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTAACTCAGCCTCCGACTaGACGTCAGATCCACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFNSASD*TSDPRL Trigger: CAGCCGTGGATCTGACGTGCAGTCGGAGGCTGAGTT...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCATAGTCAGCTCTGCTaGCTGCCCCACCTCGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFHSQLC*LPHLAH Trigger: ATGAGCGAGGTGGGGCAGCCAGCAGAGCTGACTATG...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTGTCAGTGAGCGCAGTTaGTTGTGGTCAGCGGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFVSERS*LWSAVR Trigger: TCGCACCGCTGACCACAACCAACTGCGCTCACTGAC...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCTCTCGTCCTTGTTCCTaGCATTCCGAGACAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRTPERRERERERSCGSRPCS*HSETGF Trigger: GAAACCTGTCTCGGAATGCCAGGAACAAGGACGAGA...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACCTTCGGTGGCTGCTCTaGAATCTTTGCAGGGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHLRWLL*NLCRVR Trigger: GCGAACCCTGCAAAGATTTCAGAGCAGCCACCGAAG...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR TCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACGCCGACTCTGAGGTGTaGAGCAGCCTACCATTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHADSEV*SSLPFH Trigger: GTGAAATGGTAGGCTGCTTCACACCTCAGAGTCGGC...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACCACGGCTTCGGTGGCTaGTCTGAAATCTTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHHGFGG*SEIFAG Trigger: CCCTGCAAAGATTTCAGAGCAGCCACCGAAGCCGTG...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTAGTCACGGTGGAGCTTaGTGTACTGCCAGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFSHGGA*CTARGW Trigger: CCAACCTCTGGCAGTACAGCAAGCTCCACCGTGACT...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACATAGGTGGAGTGGGCTaGGTACCCCCATATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHIGGVG*VPPYPT Trigger: TGTGGGATATGGGGGTACCCAGCCCACTCCACCTAT...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGCAACAGCTCAAAAATaGCATTCTCCTCTACCAACG | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDSREEREREREVLWATAQK*HSPLPT Trigger: CGTTGGTAGAGGAGAATGGCATTTTTGAGCTGTTGC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTTTCGGCAAAGGTGAGTaGATCAGCTGTGAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFFGKGE*ISCERK Trigger: CTTCCTCTCACAGCTGATGCACTCACCTTTGCCGAA...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR GCA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACGCAACAGCTCAAAAATaGCATTCTCCTCTACCAACG | + |
|
Preference number: 4 (lower is better) Translates to: SMCCGTAGAEPISWKLNHATAQK*HSPLPT Trigger: CGTTGGTAGAGGAGAATGGCATTTTTGAGCTGTTGC...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | CCTCTGGCGCTCTCCGCGGAGCCATCAAGCTCAGCAGACCCATTGTaGCGCGACTGCTGGCCCAGCTGCAGGAGGCGGGCTCGGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLALSAEPSSSADPL*RDCWPSCRRRARTC Trigger: GCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGGCTCCGCGGAGAGCGCCAGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS CCA 90 bp | CGCGACTGCTGGCCCAGCTGCAGGAGGCGGGCTCGGACTTGCTCCTaGACTCTGGCAGCTCTAAGTCGATCAGCCTCCGGTCCCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RDCWPSCRRRARTCS*TLAALSRSASGPSA Trigger: TGCGGAGGGACCGGAGGCTGATCGACTTAGAGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS TCA 90 bp | CCCTGCCATGTCCCTGCGGCCCCGGCCTTCAAGCCGCTGCAAGGCTaGTGGCGGCATCTCGTCGTAGAGGCGGTAGGACAGGTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PCHVPAAPAFKPLQG*WRHLVVEAVGQVPQ Trigger: CTGAGGAACCTGTCCTACCGCCTCTACGACGAGATGCCGCCATCAGCCTTGCAGCGGCTTGAAGGCCGGGGCCGCAGGGACATGGCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | TTGTGCCGCGACTGCTGGCCCAGCTGCAGGAGGCGGGCTCGGACTTaGTCCTGGACTCTGGCAGCTCTAAGTCGATCAGCCTCCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LCRDCWPSCRRRART*SWTLAALSRSASGP Trigger: GGGACCGGAGGCTGATCGACTTAGAGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS GCA 90 bp | CTCTCCGCGGAGCCATCAAGCTCAGCAGACCCATTGTGCCGCGACTaGTGGCCCAGCTGCAGGAGGCGGGCTCGGACTTGCTCCTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LSAEPSSSADPLCRD*WPSCRRRARTCSWT Trigger: AGTCCAGGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGGCTCCGCGGAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS CCA 90 bp | TCCGCGGAGCCATCAAGCTCAGCAGACCCATTGTGCCGCGACTGCTaGCCCAGCTGCAGGAGGCGGGCTCGGACTTGCTCCTGGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAEPSSSADPLCRDC*PSCRRRARTCSWTL Trigger: CAGAGTCCAGGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGGCTCCGCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS CCA 90 bp | TCTTTGCAGGGTTCGCATGGCAGGTGCACGGATGGTCCTGCTGGGTaGTCCCTCTGTGGCCTCTGGCCAGTCCAGGCCCCCTGCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLQGSHGRCTDGPAG*SLCGLWPVQAPCSA Trigger: AGCCGAGCAGGGGGCCTGGACTGGCCAGAGGCCACAGAGGGACCACCCAGCAGGACCATCCGTGCACCTGCCATGCGAACCCTGCAAAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS-3UTR CAA 90 bp | AAGCTGGGCTGTAGGCCGGCTTGGCGATGGGCCGGAAGGTCGAGGTCTTGTCTCGAGGCGGGCTCGGACTaGCTCCTGGACTCTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KLGCRPAWRWAGRSRSCLEAGSD*LLDSGS Trigger: GCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTC...GAGACAAGACCTCGACCTTCCGGCCCATCGCCAAGCCGGCCTACAGCCCAGCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| CDS GCA 90 bp | GGCCCACCTGCCCCTGACAGGGGGCTCAGCACCAGATCTGTGAGCTaGTCCAGTGTATCCCGGGCGAGGCGGTCCTTTAGGTGGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GPPAPDRGLSTRSVS*SSVSRARRSFRWSL Trigger: CAGTGACCACCTAAAGGACCGCCTCGCCCGGGATACACTGGAGCAGCTCACAGATCTGGTGCTGAGCCCCCTGTCAGGGGCAGGTGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS TCA 90 bp | ATGGCCCGTGTAGCTGTCCAGCCCGCGTACATCTGGCAGGTGGCCTaGGTCAGCCAGGCTAAGACTGAGGCTGCGCACAGATGGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: MARVAVQPAYIWQVA*VSQAKTEAAHRWGS Trigger: CGAGCCCCATCTGTGCGCAGCCTCAGTCTTAGCCTGGCTGACTCAGGCCACCTGCCAGATGTACGCGGGCTGGACAGCTACACGGGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | CCATCAAGCTCAGCAGACCCATTGTGCCGCGACTGCTGGCCCAGCTaGAGGAGGCGGGCTCGGACTTGCTCCTGGACTCTGGCAGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PSSSADPLCRDCWPS*RRRARTCSWTLAAL Trigger: TAGAGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS CCA 90 bp | GGCAGAGCCAGGGAGCAAACACCAGTCTCAGGCTTGCCGCTGGTCTaGCCCCCACTGGCTCCCTGGCTCATTCTGGAGGTCCCTGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GRAREQTPVSGLPLV*PPLAPWLILEVPAV Trigger: TACAGCAGGGACCTCCAGAATGAGCCAGGGAGCCAGTGGGGGCCAGACCAGCGGCAAGCCTGAGACTGGTGTTTGCTCCCTGGCTCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106039.9 |
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| CDS GCA 90 bp | GCCCCAGCCTCAGTGAGCGCAGGGATAATGTGTCATAGTCAGCTCTaGTGGCTGCCCCACCTCGCTCATGGAAGGACACTGGCCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: APASVSAGIMCHSQL*WLPHLAHGRTLAGW Trigger: CCACCCGGCCAGTGTCCTTCCATGAGCGAGGTGGGGCAGCCAGCAGAGCTGACTATGACACATTATCCCTGCGCTCACTGAGGCTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS GCA 90 bp | TCTGAAATCTTTGCAGGGTTCGCATGGCAGGTGCACGGATGGTCCTaGTGGGTGGTCCCTCTGTGGCCTCTGGCCAGTCCAGGCCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEIFAGFAWQVHGWS*WVVPLWPLASPGPL Trigger: CAGGGGGCCTGGACTGGCCAGAGGCCACAGAGGGACCACCCAGCAGGACCATCCGTGCACCTGCCATGCGAACCCTGCAAAGATTTCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS GCA 90 bp | AGTCCTCTTTCCGGTAGCCTTTCGCCCGGAAGTCACGGTGGAGCTTaGTGTACTGCCAGAGGTTGGCCAAGAGGCTGGAGGCTGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPLSGSLSPGSHGGA*CTARGWPRGWRLPG Trigger: CCCGGGCAGCCTCCAGCCTCTTGGCCAACCTCTGGCAGTACAGCAAGCTCCACCGTGACTTCCGGGCGAAAGGCTACCGGAAAGAGGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | GCTGGTCTGGCCCCCACTGGCTCCCTGGCTCATTCTGGAGGTCCCTaGTGTAGGACAATTCCTTCTGGGCTCCATCCGGGTCCGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: AGLAPTGSLAHSGGP*CRTIPSGLHPGPRS Trigger: GGATCTCGGACCCGGATGGAGCCCAGAAGGAATTGTCCTACAGCAGGGACCTCCAGAATGAGCCAGGGAGCCAGTGGGGGCCAGACCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106039.9 |
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| CDS CCA 90 bp | ATAGTCAGCTCTGCTGGCTGCCCCACCTCGCTCATGGAAGGACACTaGCCGGGTGGGCATAGGTGGAGTGGGCTGGGTACCCCCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: IVSSAGCPTSLMEGH*PGGHRWSGLGTPIS Trigger: GGATATGGGGGTACCCAGCCCACTCCACCTATGCCCACCCGGCCAGTGTCCTTCCATGAGCGAGGTGGGGCAGCCAGCAGAGCTGACTAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS TCA 90 bp | GCACCTGACACTGACCCGGTACCCCCACGGCTTCGGTGGCTGCTCTaGAATCTTTGCAGGGTTCGCATGGCAGGTGCACGGATGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: APDTDPVPPRLRWLL*NLCRVRMAGARMVL Trigger: CAGGACCATCCGTGCACCTGCCATGCGAACCCTGCAAAGATTTCAGAGCAGCCACCGAAGCCGTGGGGGTACCGGGTCAGTGTCAGGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS TCA 90 bp | GTGAGTGCATCAGCTGTGAGAGGAAGCTCTCGCAGCCGCCGACTCTaGGGTGTGAAGCAGCCTACCATTTCACCAGGCGGAGCCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSASAVRGSSRSRRL*GVKQPTISPGGAPA Trigger: GGCAGGGGCTCCGCCTGGTGAAATGGTAGGCTGCTTCACACCTCAGAGTCGGCGGCTGCGAGAGCTTCCTCTCACAGCTGATGCACTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 90 bp | CCAGCCTCAGTGAGCGCAGGGATAATGTGTCATAGTCAGCTCTGCTaGCTGCCCCACCTCGCTCATGGAAGGACACTGGCCGGGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PASVSAGIMCHSQLC*LPHLAHGRTLAGWA Trigger: TGCCCACCCGGCCAGTGTCCTTCCATGAGCGAGGTGGGGCAGCCAGCAGAGCTGACTATGACACATTATCCCTGCGCTCACTGAGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS CCA 90 bp | CTTTCGCCCGGAAGTCACGGTGGAGCTTGCTGTACTGCCAGAGGTTaGCCAAGAGGCTGGAGGCTGCCCGGGAAGACTTCTCACTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPGSHGGACCTARG*PRGWRLPGKTSHCR Trigger: CCGACAGTGAGAAGTCTTCCCGGGCAGCCTCCAGCCTCTTGGCCAACCTCTGGCAGTACAGCAAGCTCCACCGTGACTTCCGGGCGAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGAGGCGGGCTCGGACTaGCTCCTGGACTCTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDSREEREREREVLWEAGSD*LLDSGS Trigger: GCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | CCCGCGGTGATATTCTGTAGCGCCCCTGCGGCCGCCTCCGTTGTATaGCGATTTAGTTCACAGCGCTGCAGCAGTCGGTTGTACAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAVIFCSAPAAASVV*RFSSQRCSSRLYNP Trigger: GGGGTTGTACAACCGACTGCTGCAGCGCTGTGAACTAAATCGGCATACAACGGAGGCGGCCGCAGGGGCGCTACAGAATATCACCGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 90 bp | CGAGACAGGTTTCGGATGAGGCCAGTCAGTGAGCGCAGTTGGTTGTaGTCAGCGGTGCGAACGCGGTCCAGCAAGGGGTTCAGGATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RDRFRMRPVSERSWL*SAVRTRSSKGFRIR Trigger: GCGAATCCTGAACCCCTTGCTGGACCGCGTTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAACCTGTCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 90 bp | GCATTCCGAGACAGGTTTCGGATGAGGCCAGTCAGTGAGCGCAGTTaGTTGTGGTCAGCGGTGCGAACGCGGTCCAGCAAGGGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AFRDRFRMRPVSERS*LWSAVRTRSSKGFR Trigger: CCTGAACCCCTTGCTGGACCGCGTTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAACCTGTCTCGGAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 90 bp | AGTCACGGTGGAGCTTGCTGTACTGCCAGAGGTTGGCCAAGAGGCTaGAGGCTGCCCGGGAAGACTTCTCACTGTCGGGGCTATCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHGGACCTARGWPRG*RLPGKTSHCRGYPS Trigger: AGAGGGATAGCCCCGACAGTGAGAAGTCTTCCCGGGCAGCCTCCAGCCTCTTGGCCAACCTCTGGCAGTACAGCAAGCTCCACCGTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCCAGCACCTGCAGGTaGGGGTCTGAGGCCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDSREEREREREVLWPSTCR*GSEAMR Trigger: CCTCATGGCCTCAGACCCCAACCTGCAGGTGCTGGG...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | GCTAGCCTGGCGCTCGTAAGCATAGGCCCTGTAGGTAGAGGCGGCTaGAGGCTCCAGTTGCTCAGATACCACGCTGTAACGGTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASLALVSIGPVGRGG*RLQLLRYHAVTVIQ Trigger: CTGGATGACCGTTACAGCGTGGTATCTGAGCAACTGGAGCCTGCAGCCGCCTCTACCTACAGGGCCTATGCTTACGAGCGCCAGGCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS-3UTR CAA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCTGTACTGCCAGAGGTaGGCCAAGAGGCTGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPLYCQR*AKRLEA Trigger: AGCCTCCAGCCTCTTGGCCAACCTCTGGCAGTACAG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS TCA 90 bp | CTTGTTCCTGGCATTCCGAGACAGGTTTCGGATGAGGCCAGTCAGTaGGCGCAGTTGGTTGTGGTCAGCGGTGCGAACGCGGTCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LVPGIPRQVSDEASQ*AQLVVVSGANAVQQ Trigger: TTGCTGGACCGCGTTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAACCTGTCTCGGAATGCCAGGAACAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACGAGGCGGGCTCGGACTaGCTCCTGGACTCTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SMCCGTAGAEPISWKLNHEAGSD*LLDSGS Trigger: GCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTC...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCGGAAGGTCGAGGTCTaGTCTCCACTCATGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HTHRTPERRERERERSCGRKVEV*SPLMPW Trigger: CCAGGGCATGAGTGGAGACAAGACCTCGACCTTCCG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGAAGGCACTGCCCCCATaGTGGGCAGAACTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDSREEREREREVLWKALPP*WAELSL Trigger: GAGGCTGAGTTCTGCCCACAATGGGGGCAGTGCCTT...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGCTGCACCTCCTGGTaGGCGTGGTTGAAGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDSREEREREREVLWRCTSW*AWLKSF Trigger: GAAGCTCTTCAACCACGCCAACCAGGAGGTGCAGCG...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCCGCTGCAGCAGTCGGTaGTACAACCCCACAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFRCSSR*YNPTIW Trigger: CCAGATTGTGGGGTTGTACAACCGACTGCTGCAGCG...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCAGCACGGCTATGATGTaGACCAGCACCTCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFSTAMM*TSTSAG Trigger: CCCAGCTGAGGTGCTGGTCAACATCATAGCCGTGCT...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCTGTACTGCCAGAGGTaGGCCAAGAGGCTGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTHRTPERRERERERSCGLYCQR*AKRLEA Trigger: AGCCTCCAGCCTCTTGGCCAACCTCTGGCAGTACAG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | CCATTCGAGGCCCTTGGGATCCTTAGATACTTCGGCAAAGGTGAGTaGATCAGCTGTGAGAGGAAGCTCTCGCAGCCGCCGACTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFEALGILRYFGKGE*ISCERKLSQPPTLR Trigger: CCTCAGAGTCGGCGGCTGCGAGAGCTTCCTCTCACAGCTGATGCACTCACCTTTGCCGAAGTATCTAAGGATCCCAAGGGCCTCGAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | GTGGAGCTTGCTGTACTGCCAGAGGTTGGCCAAGAGGCTGGAGGCTaGCCGGGAAGACTTCTCACTGTCGGGGCTATCCCTCTTCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VELAVLPEVGQEAGG*PGRLLTVGAIPLLF Trigger: AAAAAGAAGAGGGATAGCCCCGACAGTGAGAAGTCTTCCCGGGCAGCCTCCAGCCTCTTGGCCAACCTCTGGCAGTACAGCAAGCTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTGCTGCTCTGAAATCTTaGCAGGGTTCGCATGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPAALKS*QGSHGR Trigger: CCTGCCATGCGAACCCTGCAAAGATTTCAGAGCAGC...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCAGCACCTGCAGGTaGGGGTCTGAGGCCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFPSTCR*GSEAMR Trigger: CCTCATGGCCTCAGACCCCAACCTGCAGGTGCTGGG...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGCTGCAGCAGTCGGTaGTACAACCCCACAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDSREEREREREVLWRCSSR*YNPTIW Trigger: CCAGATTGTGGGGTTGTACAACCGACTGCTGCAGCG...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCCTGCGGCCGCCTCCGTaGTATGCCGATTTAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HTHRTPERRERERERSCGLRPPP*YADLVH Trigger: GTGAACTAAATCGGCATACAACGGAGGCGGCCGCAG...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | CCCCTTTCCCTGCCCTGCAGAAGCCAATCAATCCCCAGTTGCAAGCGCCTGTTCGTGGACATCTCGTCCTaGTTCCTGGCATTCCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLSLPCRSQSIPSCKRLFVDISS*FLAFRD Trigger: GTCTCGGAATGCCAGGAACAAGGACGAGATGTCCAC...GAACAGGCGCTTGCAACTGGGGATTGATTGGCTTCTGCAGGGCAGGGAAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCAGCACGGCTATGATGTaGACCAGCACCTCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTHRTPERRERERERSCGSTAMM*TSTSAG Trigger: CCCAGCTGAGGTGCTGGTCAACATCATAGCCGTGCT...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS TCA 90 bp | CATTCTCCTCTACCAACGCCAGCTTGTTGTCTACATTGTCGTAGATaGGGTTGCGCATGGCACCTGTGGCGTGGCGCTGCACCTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSPLPTPACCLHCRR*GCAWHLWRGAAPPG Trigger: ACCAGGAGGTGCAGCGCCACGCCACAGGTGCCATGCGCAACCTCATCTACGACAATGTAGACAACAAGCTGGCGTTGGTAGAGGAGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS TCA 90 bp | TGGACATCTCGTCCTTGTTCCTGGCATTCCGAGACAGGTTTCGGATaGGGCCAGTCAGTGAGCGCAGTTGGTTGTGGTCAGCGGTGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: WTSRPCSWHSETGFG*GQSVSAVGCGQRCE Trigger: TTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAACCTGTCTCGGAATGCCAGGAACAAGGACGAGATGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGCTGCTCTGAAATCTTaGCAGGGTTCGCATGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HTHRTPERRERERERSCGAALKS*QGSHGR Trigger: CCTGCCATGCGAACCCTGCAAAGATTTCAGAGCAGC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGGAGGCCATGAGGTACTaGACTGCTGAAGGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDSREEREREREVLWEAMRY*TAEGRS Trigger: TGACCTGCCTTCAGCAGTCAAGTACCTCATGGCCTC...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTTCCTGGTTGGCGTGGTaGAAGAGCTTCACCAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPSWLAW*KSFTSL Trigger: TAGACTGGTGAAGCTCTTCAACCACGCCAACCAGGA...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGTGGACATCTCGTCCTaGTTCCTGGCATTCCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HTHRTPERRERERERSCGVDISS*FLAFRD Trigger: GTCTCGGAATGCCAGGAACAAGGACGAGATGTCCAC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CAA 90 bp | GCACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGAAGTCACGGTGGAGCTaGCTGTACTGCCAGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDSREEREREREVLWKSRWS*LYCQRL Trigger: CAACCTCTGGCAGTACAGCAAGCTCCACCGTGACTT...CCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CAA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACCGGAAGGTCGAGGTCTaGTCTCCACTCATGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SMCCGTAGAEPISWKLNHRKVEV*SPLMPW Trigger: CCAGGGCATGAGTGGAGACAAGACCTCGACCTTCCG...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CAA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACCGCTGCACCTCCTGGTaGGCGTGGTTGAAGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMCCGTAGAEPISWKLNHRCTSW*AWLKSF Trigger: GAAGCTCTTCAACCACGCCAACCAGGAGGTGCAGCG...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CAA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACAGTGAGCGCAGTTGGTaGTGGTCAGCGGTGCGAACG | + |
|
Preference number: 5 (lower is better) Translates to: SMCCGTAGAEPISWKLNHSERSW*WSAVRT Trigger: CGTTCGCACCGCTGACCACAACCAACTGCGCTCACT...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CAA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTAGTGAGCGCAGTTGGTaGTGGTCAGCGGTGCGAACG | + |
|
Preference number: 5 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFSERSW*WSAVRT Trigger: CGTTCGCACCGCTGACCACAACCAACTGCGCTCACT...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACAGGACTCCAGAGAGGAGAGAGAGAGAGAGAGAGAGGTCCTGTGGCGCTACCACCAGGTTGTaGAGCACGGCTATGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HTHRTPERRERERERSCGATTRL*STAMML Trigger: CAACATCATAGCCGTGCTCAACAACCTGGTGGTAGC...GCCACAGGACCTCTCTCTCTCTCTCTCTCTCCTCTCTGGAGTCCTGTGTGTGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 90 bp | CACCAGGTTGTTGAGCACGGCTATGATGTTGACCAGCACCTCAGCTaGGGGACACTTCTCACCCACACTACCAGGAAGCTTCTCAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: HQVVEHGYDVDQHLS*GTLLTHTTRKLLNQ Trigger: CTGATTGAGAAGCTTCCTGGTAGTGTGGGTGAGAAGTGTCCCCCAGCTGAGGTGCTGGTCAACATCATAGCCGTGCTCAACAACCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACCTGCGGCCGCCTCCGTaGTATGCCGATTTAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SMCCGTAGAEPISWKLNHLRPPP*YADLVH Trigger: GTGAACTAAATCGGCATACAACGGAGGCGGCCGCAG...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 90 bp | GGGGGACACTTCTCACCCACACTACCAGGAAGCTTCTCAATCAGGTaGCTCACTACCTTTGTGGACATCTCGTCCTTGTTCCTGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: GGHFSPTLPGSFSIR*LTTFVDISSLFLAF Trigger: GAATGCCAGGAACAAGGACGAGATGTCCACAAAGGTAGTGAGCCACCTGATTGAGAAGCTTCCTGGTAGTGTGGGTGAGAAGTGTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTGAGGCCATGAGGTACTaGACTGCTGAAGGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFEAMRY*TAEGRS Trigger: TGACCTGCCTTCAGCAGTCAAGTACCTCATGGCCTC...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTATCCCTGTAACATTTTaGCGTAGCTCATCATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPIPVTF*RSSSSC Trigger: GCAGGATGATGAGCTACGCAAAAATGTTACAGGGAT...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | AATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTCCCTGCCCTCTATCCCTCTTCTTTTaGATGAAGACCAGCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NRHPVHQSSSSSTPFPCPLSLFF*MKTSFR Trigger: CCGAAAGCTGGTCTTCATCAAAAAGAAGAGGGATAG...AGGGCAGGGAAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTAAGTCACGGTGGAGCTaGCTGTACTGCCAGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFKSRWS*LYCQRL Trigger: CAACCTCTGGCAGTACAGCAAGCTCCACCGTGACTT...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | ATTGTGACTAATCGCCACCCAGTACACCAGAGCAGCTCAAGCTCTACCCCCTTTTCCTGGTTGGCGTGGTaGAAGAGCTTCACCAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: IVTNRHPVHQSSSSSTPFSWLAW*KSFTSL Trigger: TAGACTGGTGAAGCTCTTCAACCACGCCAACCAGGA...AAAGGGGGTAGAGCTTGAGCTGCTCTGGTGTACTGGGTGGCGATTAGTCACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | GTAGCTCATCATCCTGCTCTCGAAGTGTCCGCAACAGCTCAAAAATaGCATTCTCCTCTACCAACGCCAGCTTGTTGTCTACATTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VAHHPALEVSATAQK*HSPLPTPACCLHCR Trigger: ACGACAATGTAGACAACAAGCTGGCGTTGGTAGAGGAGAATGGCATTTTTGAGCTGTTGCGGACACTTCGAGAGCAGGATGATGAGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS-3UTR CAA 90 bp | TCTATGTGCTGTGGGACAGCAGGAGCTGAGCCTATCTCTTGGAAGCTGAATCACATCCCTGTAACATTTTaGCGTAGCTCATCATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SMCCGTAGAEPISWKLNHIPVTF*RSSSSC Trigger: GCAGGATGATGAGCTACGCAAAAATGTTACAGGGAT...GTGATTCAGCTTCCAAGAGATAGGCTCAGCTCCTGCTGTCCCACAGCACATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 90 bp | AGGTTCCATAGGATCCCTGTAACATTTTTGCGTAGCTCATCATCCTaGTCTCGAAGTGTCCGCAACAGCTCAAAAATGCCATTCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RFHRIPVTFLRSSSS*SRSVRNSSKMPFSS Trigger: AGAGGAGAATGGCATTTTTGAGCTGTTGCGGACACTTCGAGAGCAGGATGATGAGCTACGCAAAAATGTTACAGGGATCCTATGGAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS TCA 72 bp | GGCTCAGCACACCTGCCCACCTGCGGTCGCCCGCGGTaGTATTCTGTAGCGCCCCTGCGGCCGCCTCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSAHLPTCGRPR*YSVAPLRPPPL Trigger: CAACGGAGGCGGCCGCAGGGGCGCTACAGAATATCACCGCGGGCGACCGCAGGTGGGCAGGTGTGCTGAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 90 bp | CTGCCTCTGGCGCTCTCCGCGGAGCCATCAAGCTCAGCAGACCCATaGTGCCGCGACTGCTGGCCCAGCTGCAGGAGGCGGGCTCGGACT | + |
|
Preference number: 6 (lower is better) Translates to: LPLALSAEPSSSADP*CRDCWPSCRRRART Trigger: AGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGGCTCCGCGGAGAGCGCCAGAGGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160869.2 |
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| CDS CAA 72 bp | GCGCTCTCCGCGGAGCCATCAAGCTCAGCAGACCCATaGTGCCGCGACTGCTGGCCCAGCTGCAGGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALSAEPSSSADP*CRDCWPSCRRR Trigger: CCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGGCTCCGCGGAGAGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS CAA 90 bp | ATGCCTCTGGCGCTCTCCGCGGAGCCATCAAGCTCAGCAGACCCATaGTGCCGCGACTGCTGGCCCAGCTGCAGGAGGCGGGCTCGGACT | + |
|
Preference number: 6 (lower is better) Translates to: MPLALSAEPSSSADP*CRDCWPSCRRRART Trigger: AGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGGCTCCGCGGAGAGCGCCAGAGGCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS TCA 72 bp | GTCCCTGCGGCCCCGGCCTTCAAGCCGCTGCAAGGCTaGTGGCGGCATCTCGTCGTAGAGGCGGTAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: VPAAPAFKPLQG*WRHLVVEAVGQ Trigger: CTGTCCTACCGCCTCTACGACGAGATGCCGCCATCAGCCTTGCAGCGGCTTGAAGGCCGGGGCCGCAGGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | CTCTCCGCGGAGCCATCAAGCTCAGCAGACCCATTGTaGCGCGACTGCTGGCCCAGCTGCAGGAGGCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSAEPSSSADPL*RDCWPSCRRRA Trigger: AGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGGCTCCGCGGAGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS GCA 72 bp | GAGCCATCAAGCTCAGCAGACCCATTGTGCCGCGACTaGTGGCCCAGCTGCAGGAGGCGGGCTCGGACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: EPSSSADPLCRD*WPSCRRRARTC Trigger: GCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS GCA 72 bp | TGTGAAGCAGCCTACCATTTCACCAGGCGGAGCCCCTaGCATGTCCCTGCGGCCCCGGCCTTCAAGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CEAAYHFTRRSP*HVPAAPAFKPL Trigger: CAGCGGCTTGAAGGCCGGGGCCGCAGGGACATGGCAGGGGCTCCGCCTGGTGAAATGGTAGGCTGCTTCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | CCATCAAGCTCAGCAGACCCATTGTGCCGCGACTGCTaGCCCAGCTGCAGGAGGCGGGCTCGGACTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSSSADPLCRDC*PSCRRRARTCS Trigger: GGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAATGGGTCTGCTGAGCTTGATGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS CAA 90 bp | ATTGTGCCGCGACTGCTGGCCCAGCTGCAGGAGGCGGGCTCGGACTaGCTCCTGGACTCTGGCAGCTCTAAGTCGATCAGCCTCCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: IVPRLLAQLQEAGSD*LLDSGSSKSISLRS Trigger: GGACCGGAGGCTGATCGACTTAGAGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCGCGGCACAAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS GCA 72 bp | GACTGCTGGCCCAGCTGCAGGAGGCGGGCTCGGACTTaGTCCTGGACTCTGGCAGCTCTAAGTCGATCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DCWPSCRRRART*SWTLAALSRSA Trigger: GGCTGATCGACTTAGAGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS GCA 72 bp | GCCCCTGACAGGGGGCTCAGCACCAGATCTGTGAGCTaGTCCAGTGTATCCCGGGCGAGGCGGTCCTTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: APDRGLSTRSVS*SSVSRARRSFR Trigger: CCTAAAGGACCGCCTCGCCCGGGATACACTGGAGCAGCTCACAGATCTGGTGCTGAGCCCCCTGTCAGGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | TGGCCCAGCTGCAGGAGGCGGGCTCGGACTTGCTCCTaGACTCTGGCAGCTCTAAGTCGATCAGCCTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: WPSCRRRARTCS*TLAALSRSASG Trigger: ACCGGAGGCTGATCGACTTAGAGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS CCA 72 bp | TCGCTCATGGAAGGACACTGGCCGGGTGGGCATAGGTaGAGTGGGCTGGGTACCCCCATATCCCACAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLMEGHWPGGHR*SGLGTPISHSP Trigger: GGGGCTGTGGGATATGGGGGTACCCAGCCCACTCCACCTATGCCCACCCGGCCAGTGTCCTTCCATGAGCGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS CAA 72 bp | CGACTGCTGGCCCAGCTGCAGGAGGCGGGCTCGGACTaGCTCCTGGACTCTGGCAGCTCTAAGTCGATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLLAQLQEAGSD*LLDSGSSKSIS Trigger: GCTGATCGACTTAGAGCTGCCAGAGTCCAGGAGCAAGTCCGAGCCCGCCTCCTGCAGCTGGGCCAGCAGTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000160869.2 |
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| CDS CCA 72 bp | GGAGCTTGCTGTACTGCCAGAGGTTGGCCAAGAGGCTaGAGGCTGCCCGGGAAGACTTCTCACTGTCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GACCTARGWPRG*RLPGKTSHCRG Trigger: GCCCCGACAGTGAGAAGTCTTCCCGGGCAGCCTCCAGCCTCTTGGCCAACCTCTGGCAGTACAGCAAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | AGGGAGCAAACACCAGTCTCAGGCTTGCCGCTGGTCTaGCCCCCACTGGCTCCCTGGCTCATTCTGGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: REQTPVSGLPLV*PPLAPWLILEV Trigger: GACCTCCAGAATGAGCCAGGGAGCCAGTGGGGGCCAGACCAGCGGCAAGCCTGAGACTGGTGTTTGCTCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106039.9 |
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| CDS CAA 90 bp | CTCGTAAGCATAGGCCCTGTAGGTAGAGGCGGCTGCAGGCTCCAGTaGCTCAGATACCACGCTGTAACGGTCATCCAGGCCCCCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LVSIGPVGRGGCRLQ*LRYHAVTVIQAPWP Trigger: GGGCCAGGGGGCCTGGATGACCGTTACAGCGTGGTATCTGAGCAACTGGAGCCTGCAGCCGCCTCTACCTACAGGGCCTATGCTTACGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS TCA 72 bp | ACTGACCCGGTACCCCCACGGCTTCGGTGGCTGCTCTaGAATCTTTGCAGGGTTCGCATGGCAGGTGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: TDPVPPRLRWLL*NLCRVRMAGAR Trigger: CCGTGCACCTGCCATGCGAACCCTGCAAAGATTTCAGAGCAGCCACCGAAGCCGTGGGGGTACCGGGTCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS GCA 72 bp | GTTGGCGTGGTTGAAGAGCTTCACCAGTCTAGGCACTaGCTGAAGGCTGCGAGCCTGCTTCTTGGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGVVEELHQSRH*LKAASLLLGGG Trigger: GCCGCCGCCAAGAAGCAGGCTCGCAGCCTTCAGGCAGTGCCTAGACTGGTGAAGCTCTTCAACCACGCCAAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | AGAGCATCCACTAGCCCATGGCACTCGCGCATCTTCTaGCGAGTGGCCTGGGAGGCTGAGCTGAGGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RASTSPWHSRIF*RVAWEAELRFL Trigger: CAGGAACCTCAGCTCAGCCTCCCAGGCCACTCGGCAGAAGATGCGCGAGTGCCATGGGCTAGTGGATGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | GGCCAGTCAGTGAGCGCAGTTGGTTGTGGTCAGCGGTaGGAACGCGGTCCAGCAAGGGGTTCAGGATTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GQSVSAVGCGQR*ERGPARGSGFA Trigger: AGCGAATCCTGAACCCCTTGCTGGACCGCGTTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | GCCCCCACTGGCTCCCTGGCTCATTCTGGAGGTCCCTaGTGTAGGACAATTCCTTCTGGGCTCCATCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: APTGSLAHSGGP*CRTIPSGLHPG Trigger: ACCCGGATGGAGCCCAGAAGGAATTGTCCTACAGCAGGGACCTCCAGAATGAGCCAGGGAGCCAGTGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106039.9 |
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| CDS CCA 72 bp | TTGCGCATGGCACCTGTGGCGTGGCGCTGCACCTCCTaGTTGGCGTGGTTGAAGAGCTTCACCAGTCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRMAPVAWRCTS*LAWLKSFTSLG Trigger: GCCTAGACTGGTGAAGCTCTTCAACCACGCCAACCAGGAGGTGCAGCGCCACGCCACAGGTGCCATGCGCAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | CAGCGCTGCAGCAGTCGGTTGTACAACCCCACAATCTaGGGGCTCCACAGCCATTCGAGGCCCTTGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: QRCSSRLYNPTI*GLHSHSRPLGS Trigger: GGATCCCAAGGGCCTCGAATGGCTGTGGAGCCCCCAGATTGTGGGGTTGTACAACCGACTGCTGCAGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | TCAGGCTTGCCGCTGGTCTGGCCCCCACTGGCTCCCTaGCTCATTCTGGAGGTCCCTGCTGTAGGACAATTC | + |
|
Preference number: 6 (lower is better) Translates to: SGLPLVWPPLAP*LILEVPAVGQF Trigger: GAATTGTCCTACAGCAGGGACCTCCAGAATGAGCCAGGGAGCCAGTGGGGGCCAGACCAGCGGCAAGCCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106039.9 |
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| CDS CAA 72 bp | CGCATGGCACCTGTGGCGTGGCGCTGCACCTCCTGGTaGGCGTGGTTGAAGAGCTTCACCAGTCTAGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RMAPVAWRCTSW*AWLKSFTSLGT Trigger: AGTGCCTAGACTGGTGAAGCTCTTCAACCACGCCAACCAGGAGGTGCAGCGCCACGCCACAGGTGCCATGCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 72 bp | AGGTTTCGGATGAGGCCAGTCAGTGAGCGCAGTTGGTaGTGGTCAGCGGTGCGAACGCGGTCCAGCAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RFRMRPVSERSW*WSAVRTRSSKG Trigger: CCCCTTGCTGGACCGCGTTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS TCA 72 bp | GGCATTCCGAGACAGGTTTCGGATGAGGCCAGTCAGTaGGCGCAGTTGGTTGTGGTCAGCGGTGCGAACGCG | + |
|
Preference number: 6 (lower is better) Translates to: GIPRQVSDEASQ*AQLVVVSGANA Trigger: CGCGTTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAACCTGTCTCGGAATGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | TTTCGGATGAGGCCAGTCAGTGAGCGCAGTTGGTTGTaGTCAGCGGTGCGAACGCGGTCCAGCAAGGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FRMRPVSERSWL*SAVRTRSSKGF Trigger: GAACCCCTTGCTGGACCGCGTTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | GACAGGTTTCGGATGAGGCCAGTCAGTGAGCGCAGTTaGTTGTGGTCAGCGGTGCGAACGCGGTCCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: DRFRMRPVSERS*LWSAVRTRSSK Trigger: CTTGCTGGACCGCGTTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAACCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | GGAAGTCACGGTGGAGCTTGCTGTACTGCCAGAGGTTaGCCAAGAGGCTGGAGGCTGCCCGGGAAGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSHGGACCTARG*PRGWRLPGKTS Trigger: AGAAGTCTTCCCGGGCAGCCTCCAGCCTCTTGGCCAACCTCTGGCAGTACAGCAAGCTCCACCGTGACTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 90 bp | CATGCCCTGGGATCGGGAGCTGAAGCCAGTCTGCATAGTGTGATATaGACCTCTGGGCATGCCTCTGGCGCTCTCCGCGGAGCCATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HALGSGAEASLHSVI*TSGHASGALRGAIK Trigger: CTTGATGGCTCCGCGGAGAGCGCCAGAGGCATGCCCAGAGGTCAATATCACACTATGCAGACTGGCTTCAGCTCCCGATCCCAGGGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | TTCGGTGGCTGCTCTGAAATCTTTGCAGGGTTCGCATaGCAGGTGCACGGATGGTCCTGCTGGGTGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: FGGCSEIFAGFA*QVHGWSCWVVP Trigger: AGGGACCACCCAGCAGGACCATCCGTGCACCTGCCATGCGAACCCTGCAAAGATTTCAGAGCAGCCACCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS CAA 72 bp | GGATCGGGAGCTGAAGCCAGTCTGCATAGTGTGATATaGACCTCTGGGCATGCCTCTGGCGCTCTCCGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSGAEASLHSVI*TSGHASGALRG Trigger: TCCGCGGAGAGCGCCAGAGGCATGCCCAGAGGTCAATATCACACTATGCAGACTGGCTTCAGCTCCCGATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 72 bp | ATAGGCCCTGTAGGTAGAGGCGGCTGCAGGCTCCAGTaGCTCAGATACCACGCTGTAACGGTCATCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: IGPVGRGGCRLQ*LRYHAVTVIQA Trigger: GGCCTGGATGACCGTTACAGCGTGGTATCTGAGCAACTGGAGCCTGCAGCCGCCTCTACCTACAGGGCCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS CAA 72 bp | TCCCGGGCAGCAATGGGGCTGGCTACCACCAGGTTGTaGAGCACGGCTATGATGTTGACCAGCACCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SRAAMGLATTRL*STAMMLTSTSA Trigger: AGCTGAGGTGCTGGTCAACATCATAGCCGTGCTCAACAACCTGGTGGTAGCCAGCCCCATTGCTGCCCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 72 bp | AGGTCCCGGGCAGCAATGGGGCTGGCTACCACCAGGTaGTTGAGCACGGCTATGATGTTGACCAGCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSRAAMGLATTR*LSTAMMLTSTS Trigger: TGAGGTGCTGGTCAACATCATAGCCGTGCTCAACAACCTGGTGGTAGCCAGCCCCATTGCTGCCCGGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 90 bp | TTCCGAGACAGGTTTCGGATGAGGCCAGTCAGTGAGCGCAGTTGGTaGTGGTCAGCGGTGCGAACGCGGTCCAGCAAGGGGTTCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: FRDRFRMRPVSERSW*WSAVRTRSSKGFRI Trigger: AATCCTGAACCCCTTGCTGGACCGCGTTCGCACCGCTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAACCTGTCTCGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 90 bp | GCAATGGGGCTGGCTACCACCAGGTTGTTGAGCACGGCTATGATGTaGACCAGCACCTCAGCTGGGGGACACTTCTCACCCACACTACCA | + |
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Preference number: 6 (lower is better) Translates to: AMGLATTRLLSTAMM*TSTSAGGHFSPTLP Trigger: TGGTAGTGTGGGTGAGAAGTGTCCCCCAGCTGAGGTGCTGGTCAACATCATAGCCGTGCTCAACAACCTGGTGGTAGCCAGCCCCATTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | GCCCTTGGGATCCTTAGATACTTCGGCAAAGGTGAGTaGATCAGCTGTGAGAGGAAGCTCTCGCAGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: ALGILRYFGKGE*ISCERKLSQPP Trigger: CGGCGGCTGCGAGAGCTTCCTCTCACAGCTGATGCACTCACCTTTGCCGAAGTATCTAAGGATCCCAAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | GCCGCCTCCGTTGTATGCCGATTTAGTTCACAGCGCTaGAGCAGTCGGTTGTACAACCCCACAATCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AASVVCRFSSQR*SSRLYNPTIWG Trigger: CCCCCAGATTGTGGGGTTGTACAACCGACTGCTGCAGCGCTGTGAACTAAATCGGCATACAACGGAGGCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | ATATTCTGTAGCGCCCCTGCGGCCGCCTCCGTTGTATaGCGATTTAGTTCACAGCGCTGCAGCAGTCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: IFCSAPAAASVV*RFSSQRCSSRL Trigger: CAACCGACTGCTGCAGCGCTGTGAACTAAATCGGCATACAACGGAGGCGGCCGCAGGGGCGCTACAGAATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 72 bp | CTGGCTACCACCAGGTTGTTGAGCACGGCTATGATGTaGACCAGCACCTCAGCTGGGGGACACTTCTCACCC | + |
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Preference number: 6 (lower is better) Translates to: LATTRLLSTAMM*TSTSAGGHFSP Trigger: GGGTGAGAAGTGTCCCCCAGCTGAGGTGCTGGTCAACATCATAGCCGTGCTCAACAACCTGGTGGTAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS TCA 72 bp | CTACCAACGCCAGCTTGTTGTCTACATTGTCGTAGATaGGGTTGCGCATGGCACCTGTGGCGTGGCGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LPTPACCLHCRR*GCAWHLWRGAA Trigger: TGCAGCGCCACGCCACAGGTGCCATGCGCAACCTCATCTACGACAATGTAGACAACAAGCTGGCGTTGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS TCA 72 bp | CGTCCTTGTTCCTGGCATTCCGAGACAGGTTTCGGATaGGGCCAGTCAGTGAGCGCAGTTGGTTGTGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: RPCSWHSETGFG*GQSVSAVGCGQ Trigger: CTGACCACAACCAACTGCGCTCACTGACTGGCCTCATCCGAAACCTGTCTCGGAATGCCAGGAACAAGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | TCAGTGAGCGCAGGGATAATGTGTCATAGTCAGCTCTaGTGGCTGCCCCACCTCGCTCATGGAAGGACACTG | + |
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Preference number: 6 (lower is better) Translates to: SVSAGIMCHSQL*WLPHLAHGRTL Trigger: CAGTGTCCTTCCATGAGCGAGGTGGGGCAGCCAGCAGAGCTGACTATGACACATTATCCCTGCGCTCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 ENSMUST00000163041.2 |
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| CDS CAA 72 bp | CCCACAATCTGGGGGCTCCACAGCCATTCGAGGCCCTaGGGATCCTTAGATACTTCGGCAAAGGTGAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PTIWGLHSHSRP*GSLDTSAKVSA Trigger: TGCACTCACCTTTGCCGAAGTATCTAAGGATCCCAAGGGCCTCGAATGGCTGTGGAGCCCCCAGATTGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CCA 72 bp | GTTGAGCACGGCTATGATGTTGACCAGCACCTCAGCTaGGGGACACTTCTCACCCACACTACCAGGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VEHGYDVDQHLS*GTLLTHTTRKL Trigger: AAGCTTCCTGGTAGTGTGGGTGAGAAGTGTCCCCCAGCTGAGGTGCTGGTCAACATCATAGCCGTGCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 72 bp | AGGTTCCTCAGCACACACACAGCATTTTCCACACTCTaGTCCTCACACTTGCCAACGTCCAGGGCATGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RFLSTHTAFSTL*SSHLPTSRAWL Trigger: CAACCATGCCCTGGACGTTGGCAAGTGTGAGGACAAGAGTGTGGAAAATGCTGTGTGTGTGCTGAGGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 90 bp | AGGTGGTCACTGGAGGACAGGTTCCATAGGATCCCTGTAACATTTTaGCGTAGCTCATCATCCTGCTCTCGAAGTGTCCGCAACAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RWSLEDRFHRIPVTF*RSSSSCSRSVRNSS Trigger: TGAGCTGTTGCGGACACTTCGAGAGCAGGATGATGAGCTACGCAAAAATGTTACAGGGATCCTATGGAACCTGTCCTCCAGTGACCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS CAA 72 bp | CTGGAGGACAGGTTCCATAGGATCCCTGTAACATTTTaGCGTAGCTCATCATCCTGCTCTCGAAGTGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LEDRFHRIPVTF*RSSSSCSRSVR Trigger: GCGGACACTTCGAGAGCAGGATGATGAGCTACGCAAAAATGTTACAGGGATCCTATGGAACCTGTCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | CATCCTGCTCTCGAAGTGTCCGCAACAGCTCAAAAATaGCATTCTCCTCTACCAACGCCAGCTTGTTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: HPALEVSATAQK*HSPLPTPACCL Trigger: TAGACAACAAGCTGGCGTTGGTAGAGGAGAATGGCATTTTTGAGCTGTTGCGGACACTTCGAGAGCAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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| CDS GCA 72 bp | AGGATCCCTGTAACATTTTTGCGTAGCTCATCATCCTaGTCTCGAAGTGTCCGCAACAGCTCAAAAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: RIPVTFLRSSSS*SRSVRNSSKMP Trigger: TGGCATTTTTGAGCTGTTGCGGACACTTCGAGAGCAGGATGATGAGCTACGCAAAAATGTTACAGGGATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066873.5 ENSMUST00000106039.9 |
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