Pregenerated sensors for PKP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026413Ensembl transcript IDs: ENSMUST00000027667.13, ENSMUST00000163260.8, ENSMUST00000189805.7
Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGATTCCGTTCTGCCTCCTGGTCTCCAGCTTGTTGGGGGTGCTCCTaGACACCAGGTTGCGCAGGGCCCCGGCAGCAGCCTGCTGGACAT | + |
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Preference number: 1 (lower is better) Translates to: GFRSASWSPACWGCS*TPGCAGPRQQPAGH Trigger: ATGTCCAGCAGGCTGCTGCCGGGGCCCTGCGCAACCTGGTGTTCAGGAGCACCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAATCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR GCA 90 bp | CTCCCGCTTCTCCTCAGGAGGCTGACAGCTTCACGGATTCCGTTCTaGCTCCTGGTCTCCAGCTTGTTGGGGGTGCTCCTGAACACCAGG | + |
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Preference number: 1 (lower is better) Translates to: LPLLLRRLTASRIPF*LLVSSLLGVLLNTR Trigger: CCTGGTGTTCAGGAGCACCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGAAGCTGTCAGCCTCCTGAGGAGAAGCGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR GCA 90 bp | CCTGGTTTCCCATCACTCTGTGCAGCACAGGGTGGCGAGACATGTTaGTCAGCAGAGAGGCTCCGGACCGCACCACATCCGAATTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: PGFPSLCAAQGGETC*SAERLRTAPHPNCQ Trigger: CTGGCAATTCGGATGTGGTGCGGTCCGGAGCCTCTCTGCTGAGCAACATGTCTCGCCACCCTGTGCTGCACAGAGTGATGGGAAACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR GCA 90 bp | GGTTCAGGTAGGTCCGGATGGCATCTGAGTGGTACAGCCAGCTGCTaGCCTTGGGGTTGGTCTCTTCCTCCGGAAGTGGGCAGTCATAGT | + |
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Preference number: 1 (lower is better) Translates to: GSGRSGWHLSGTASC*PWGWSLPPEVGSHS Trigger: ACTATGACTGCCCACTTCCGGAGGAAGAGACCAACCCCAAGGGCAGCAGCTGGCTGTACCACTCAGATGCCATCCGGACCTACCTGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CCA 90 bp | GAACAGGCAGGGCGTCGGCCACCAGCTCCTCCTTCAGCTCATCAGTaGAAGACAGGTTCCAGAGGAGCCCAGTCAGCTGTTTTTGGATCT | + |
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Preference number: 1 (lower is better) Translates to: EQAGRRPPAPPSAHQ*KTGSRGAQSAVFGS Trigger: AGATCCAAAAACAGCTGACTGGGCTCCTCTGGAACCTGTCTTCCACTGATGAGCTGAAGGAGGAGCTGGTGGCCGACGCCCTGCCTGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR TCA 90 bp | GACAGTGTGGTGGGACAGCATCCCACGCTGGTATCAGAGAGGAGGTaGGGTAGGAGGCAGAATCCCACACAAGCCAAACAGGGAAGGATG | + |
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Preference number: 1 (lower is better) Translates to: DSVVGQHPTLVSERR*GRRQNPTQAKQGRM Trigger: CATCCTTCCCTGTTTGGCTTGTGTGGGATTCTGCCTCCTACCTCACCTCCTCTCTGATACCAGCGTGGGATGCTGTCCCACCACACTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| 3UTR TCA 90 bp | TCAGCTGTTTTTGGATCTCCGTGCTCCCGCTTCTCCTCAGGAGGCTaGCAGCTTCACGGATTCCGTTCTGCCTCCTGGTCTCCAGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: SAVFGSPCSRFSSGG*QLHGFRSASWSPAC Trigger: ACAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGAAGCTGTCAGCCTCCTGAGGAGAAGCGGGAGCACGGAGATCCAAAAACAGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR GCA 90 bp | CTCAGCAGAGAGGCTCCGGACCGCACCACATCCGAATTGCCAGATTaGAGGAGACGGGCGATTTGTGGCAGGCCCTTTTCCTTTATTCCA | + |
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Preference number: 1 (lower is better) Translates to: LSREAPDRTTSELPD*RRRAICGRPFSFIP Trigger: TGGAATAAAGGAAAAGGGCCTGCCACAAATCGCCCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGCGGTCCGGAGCCTCTCTGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CCA 90 bp | ATACAAGGAAACTGGGCCCGTTCAGCACAAGGTTCTCATACAAGATaGAGCAAGGACAGTGAGGGCTGGACGGAGGGTCCCAGACGCTGC | + |
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Preference number: 1 (lower is better) Translates to: IQGNWARSAQGSHTR*SKDSEGWTEGPRRC Trigger: GCAGCGTCTGGGACCCTCCGTCCAGCCCTCACTGTCCTTGCTCCATCTTGTATGAGAACCTTGTGCTGAACGGGCCCAGTTTCCTTGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| 3UTR CCA 90 bp | TTGCCGGTGTGGCTAGTGAGGAGTCTGGTTACCTCTGGGAACACCTaGTTTCCCATCACTCTGTGCAGCACAGGGTGGCGAGACATGTTG | + |
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Preference number: 1 (lower is better) Translates to: LPVWLVRSLVTSGNT*FPITLCSTGWRDML Trigger: CAACATGTCTCGCCACCCTGTGCTGCACAGAGTGATGGGAAACCAGGTGTTCCCAGAGGTAACCAGACTCCTCACTAGCCACACCGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR GCA 90 bp | GAATCCCACACAAGCCAAACAGGGAAGGATGCTGCAGACTCACAGTaGCAGAGCACACCGGGTAGATGGCTTAGGACACCTCTCAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: ESHTSQTGKDAADSQ*QSTPGRWLRTPLRN Trigger: GTTCCTGAGAGGTGTCCTAAGCCATCTACCCGGTGTGCTCTGGCACTGTGAGTCTGCAGCATCCTTCCCTGTTTGGCTTGTGTGGGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| 3UTR CCA 90 bp | TCAGCACAAGGTTCTCATACAAGATGGAGCAAGGACAGTGAGGGCTaGACGGAGGGTCCCAGACGCTGCAGCAAGTCCAAAAGTCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: SAQGSHTRWSKDSEG*TEGPRRCSKSKSQG Trigger: TCCTTGACTTTTGGACTTGCTGCAGCGTCTGGGACCCTCCGTCCAGCCCTCACTGTCCTTGCTCCATCTTGTATGAGAACCTTGTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| 3UTR CCA 90 bp | CAGATTCATCCTGGAAGCAGGTGTGCTGGATGTAATAGGCTCCGATaGCCTGGTACTTCTCATCCTGGGAGCACAGGTACTGCACAGCCT | + |
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Preference number: 1 (lower is better) Translates to: QIHPGSRCAGCNRLR*PGTSHPGSTGTAQP Trigger: AGGCTGTGCAGTACCTGTGCTCCCAGGATGAGAAGTACCAGGCCATCGGAGCCTATTACATCCAGCACACCTGCTTCCAGGATGAATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CCA 90 bp | GACAGGCACATGTTGGGCCCAGCCCATCTGGCCAGCTTGAGATCATaGAAGAAGTTCCCACAATTGAGCCTGACCTCTGGGTATCTTAAG | + |
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Preference number: 1 (lower is better) Translates to: DRHMLGPAHLASLRS*KKFPQLSLTSGYLK Trigger: CTTAAGATACCCAGAGGTCAGGCTCAATTGTGGGAACTTCTTCCATGATCTCAAGCTGGCCAGATGGGCTGGGCCCAACATGTGCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| 3UTR TCA 90 bp | CACATGTCTATAAAGGGAGACACGGAGAGTCCCCTGTGCTGCCTGTaGACTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: HMSIKGDTESPLCCL*TAKDRHTQPVSLVG Trigger: ACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCCTTTATAGACATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| 3UTR GCA 90 bp | GTCTATAAAGGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTaGAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTTGGTTATGC | + |
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Preference number: 1 (lower is better) Translates to: VYKGRHGESPVLPVN*KGSSHPACFSCWLC Trigger: GCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCCTTTATAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| 3UTR GCA 90 bp | CTCTGGGAACTCCCTCACCTGACGCTCAGCAAGCTGGGTCTGAGGTaGATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: LWELPHLTLSKLGLR*IATNFQSSSLFSEK Trigger: CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACCCAGCTTGCTGAGCGTCAGGTGAGGGAGTTCCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| 3UTR CCA 90 bp | AGTAAGTGGATAGTCCCTGAAGCCCAGGACCTGGGTATCCTTTCTTaGGCGAACATACACTATATGGAGGGGCAGGGGTACTGTAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: SKWIVPEAQDLGILS*ANIHYMEGQGYCRF Trigger: AAACCTACAGTACCCCTGCCCCTCCATATAGTGTATGTTCGCCCAAGAAAGGATACCCAGGTCCTGGGCTTCAGGGACTATCCACTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| 3UTR TCA 90 bp | ATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTaGACGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCT | + |
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Preference number: 1 (lower is better) Translates to: IISIIHSFQAALGCI*TSPNTTQDGAGNPS Trigger: AGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| 3UTR TCA 90 bp | GCTTCTAGGAATTTATTCATAAGTCCCTTTAATTTTTCCCTGGAATaGCAGGCACATGTTGGGCCCAGCCCATCTGGCCAGCTTGAGATC | + |
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Preference number: 1 (lower is better) Translates to: ASRNLFISPFNFSLE*QAHVGPSPSGQLEI Trigger: GATCTCAAGCTGGCCAGATGGGCTGGGCCCAACATGTGCCTGTCATTCCAGGGAAAAATTAAAGGGACTTATGAATAAATTCCTAGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| 3UTR CCA 90 bp | AGAATCAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTaGTTGCATCTGAACGTCTCCAAATACCACGCAGGATGGAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RIKNYFHHPQFSGCS*LHLNVSKYHAGWSR Trigger: CCTGCTCCATCCTGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTGATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCTGGCCCACATGTCAGACAGGAGTAGCCGGGCAGCCTCTGCAGCCTTAGCTGGCGGTAGCGGGTaGGCACCTCGGCGTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SLLAHMSDRSSRAASAALAGGSG*APRRPG Trigger: GCCTGGACGCCGAGGTGCCCACCCGCTACCGCCAGC...TAAGGCTGCAGAGGCTGCCCGGCTACTCCTGTCTGACATGTGGGCCAGCAAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CAA 90 bp | CTGACAGCTTCACGGATTCCGTTCTGCCTCCTGGTCTCCAGCTTGTaGGGGGTGCTCCTGAACACCAGGTTGCGCAGGGCCCCGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LTASRIPFCLLVSSL*GVLLNTRLRRAPAA Trigger: TGCTGCCGGGGCCCTGCGCAACCTGGTGTTCAGGAGCACCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGAAGCTGTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CAA 90 bp | AGGCTGACAGCTTCACGGATTCCGTTCTGCCTCCTGGTCTCCAGCTaGTTGGGGGTGCTCCTGAACACCAGGTTGCGCAGGGCCCCGGCA | + |
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Preference number: 2 (lower is better) Translates to: RLTASRIPFCLLVSS*LGVLLNTRLRRAPA Trigger: TGCCGGGGCCCTGCGCAACCTGGTGTTCAGGAGCACCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGAAGCTGTCAGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR TCA 90 bp | CCACCAGCTCCTCCTTCAGCTCATCAGTGGAAGACAGGTTCCAGAGGAGCCCAGTGTTGGGGGTGCTCCTaGACACCAGGTTGCGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PPAPPSAHQWKTGSRGAQCWGCS*TPGCAG Trigger: CCCTGCGCAACCTGGTGTTCAGGAGCACCCCCAACA...CTGGGCTCCTCTGGAACCTGTCTTCCACTGATGAGCTGAAGGAGGAGCTGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCGGGCAGCCTCTGCAGCCTTAGGTGAGGAGGCAGTGTTGCGGCACAAGTTGGCTGGACATTCTGATTaGGGCTGCGGAGGAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SRAASAALGEEAVLRHKLAGHSD*GCGGGP Trigger: TGGACCTCCTCCGCAGCCCCAATCAGAATGTCCAGC...CAACTTGTGCCGCAACACTGCCTCCTCACCTAAGGCTGCAGAGGCTGCCCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR GCA 90 bp | AGCCGGGCAGCCTCTGCAGCCTTAGGTGAGGAGGCAGTGTTGCGGCACAAGTTGTCACGGATTCCGTTCTaGCTCCTGGTCTCCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SRAASAALGEEAVLRHKLSRIPF*LLVSSL Trigger: CAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGA...CAACTTGTGCCGCAACACTGCCTCCTCACCTAAGGCTGCAGAGGCTGCCCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGCCCACATGTCAGACAGGAGTAGCCGGGCAGCCTCTGCAGCCTTAGGTCTGTGCAGCACAGGGTaGCGAGACATGTTGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLAHMSDRSSRAASAALGLCSTG*RDMLLS Trigger: GCTGAGCAACATGTCTCGCCACCCTGTGCTGCACAG...ACCTAAGGCTGCAGAGGCTGCCCGGCTACTCCTGTCTGACATGTGGGCCAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CAA 90 bp | GCTCAGCAGAGAGGCTCCGGACCGCACCACATCCGAATTGCCAGATaGCAGGAGACGGGCGATTTGTGGCAGGCCCTTTTCCTTTATTCC | + |
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Preference number: 2 (lower is better) Translates to: AQQRGSGPHHIRIAR*QETGDLWQALFLYS Trigger: GGAATAAAGGAAAAGGGCCTGCCACAAATCGCCCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGCGGTCCGGAGCCTCTCTGCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTATCGAAACCTTGCTGCCTGAGGACACTCTGCAGCTCCTTGCTGGCCCAGGTGGCGAGACATGTTaGTCAGCAGAGAGGCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: IPIETLLPEDTLQLLAGPGGETC*SAERLR Trigger: CCGGAGCCTCTCTGCTGAGCAACATGTCTCGCCACC...TGGGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAGGAGCCCAGTCAGCTGTTTTTGGATCTCCGTGCTCCCGCTTCTCCTCATTCCGTTCTGCCTCCTaGTCTCCAGCTTGTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SRGAQSAVFGSPCSRFSSFRSAS*SPACWG Trigger: CCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAA...TGAGGAGAAGCGGGAGCACGGAGATCCAAAAACAGCTGACTGGGCTCCTCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGCCCACATGTCAGACAGGAGTAGCCGGGCAGCCTCTGCAGCCTTAGGTCTGGTATTGCCGGTGTaGCTAGTGAGGAGTCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LLAHMSDRSSRAASAALGLVLPV*LVRSLV Trigger: AACCAGACTCCTCACTAGCCACACCGGCAATACCAG...ACCTAAGGCTGCAGAGGCTGCCCGGCTACTCCTGTCTGACATGTGGGCCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CAA 90 bp | ATATTCCTATCGAAACCTTGCTGCCTGAGGACACTCTGCAGCTCCTaGCTGGCCCACATGTCAGACAGGAGTAGCCGGGCAGCCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: IFLSKPCCLRTLCSS*LAHMSDRSSRAASA Trigger: TGCAGAGGCTGCCCGGCTACTCCTGTCTGACATGTGGGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR TCA 90 bp | CCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTCTTCGGTCCGGATGGCATCTaGGTGGTACAGCCAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PNTTQDGAGNPSSRPEVFGPDGI*VVQPAA Trigger: AGCAGCTGGCTGTACCACTCAGATGCCATCCGGACC...GAAGACCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGGCCCACATGTCAGACAGGAGTAGCCGGGCAGCCTCTGCAGCCTTAGGTTCTCGGTGTAGGCATTaGGGGTATTGTACTCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLAHMSDRSSRAASAALGSRCRH*GYCTPA Trigger: AGCTGGAGTACAATACCCGCAATGCCTACACCGAGA...ACCTAAGGCTGCAGAGGCTGCCCGGCTACTCCTGTCTGACATGTGGGCCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTATCGAAACCTTGCTGCCTGAGGACACTCTGCAGCTCCTTGCTGGCCCAAGTGGTACAGCCAGCTaGTGCCCTTGGGGTTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: IPIETLLPEDTLQLLAGPSGTAS*CPWGWS Trigger: AGACCAACCCCAAGGGCAGCAGCTGGCTGTACCACT...TGGGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCTGGCCCACATGTCAGACAGGAGTAGCCGGGCAGCCTCTGCAGCCTTAGAGACGGGCGATTTGTaGCAGGCCCTTTTCCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: SLLAHMSDRSSRAASAALETGDL*QALFLY Trigger: ATAAAGGAAAAGGGCCTGCCACAAATCGCCCGTCTC...TAAGGCTGCAGAGGCTGCCCGGCTACTCCTGTCTGACATGTGGGCCAGCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CAA 90 bp | CGGCCAGCATCAGCTGAACTCAGGTTCCTCAAGCAGCCTGTAGCATaGAAGAAGACCTCAGGGTCCACTACTTCCCGGGACATGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RPASAELRFLKQPVA*KKTSGSTTSRDMLL Trigger: CAGCAACATGTCCCGGGAAGTAGTGGACCCTGAGGTCTTCTTCAATGCTACAGGCTGCTTGAGGAACCTGAGTTCAGCTGATGCTGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CAA 90 bp | CTGACTCATACCATTGGACATCAGCCCCTTGCTGGCTGTCAGGTTTaGCAGGGCCCCAGCACAGGCCTCCAAGGTAGCATCTTTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LTHTIGHQPLAGCQV*QGPSTGLQGSIFLA Trigger: AGCAAGAAAGATGCTACCTTGGAGGCCTGTGCTGGGGCCCTGCAAAACCTGACAGCCAGCAAGGGGCTGATGTCCAATGGTATGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | CCACCAGCTCCTCCTTCAGCTCATCAGTGGAAGACAGGTTCCAGAGGAGCCCAGTTGGCAGATTCATCCTaGAAGCAGGTGTGCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: PPAPPSAHQWKTGSRGAQLADSS*KQVCWM Trigger: CATCCAGCACACCTGCTTCCAGGATGAATCTGCCAA...CTGGGCTCCTCTGGAACCTGTCTTCCACTGATGAGCTGAAGGAGGAGCTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | CCATCACTCTGTGCAGCACAGGGTGGCGAGACATGTTGCTCAGCAGAGAGGCTCCCTTCAGCTCATCAGTaGAAGACAGGTTCCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: PSLCAAQGGETCCSAERLPSAHQ*KTGSRG Trigger: TCCTCTGGAACCTGTCTTCCACTGATGAGCTGAAGG...GAGCCTCTCTGCTGAGCAACATGTCTCGCCACCCTGTGCTGCACAGAGTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | AACCGGGAGGTGAAGTTTCTGAGGTTGTTGGCCCCAGCTATGTTTCCCATCATAGCCAGCTGCTGCCCTTaGGGTTGGTCTCTTCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: NREVKFLRLLAPAMFPIIASCCP*GWSLPP Trigger: CGGAGGAAGAGACCAACCCCAAGGGCAGCAGCTGGC...TATGATGGGAAACATAGCTGGGGCCAACAACCTCAGAAACTTCACCTCCCGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR CAA 90 bp | GCAGCCTCTGCAGCCTTAGGTGAGGAGGCAGTGTTGCGGCACAAGTaGAAGACATTGTTGAGCATGCTGTTGGAGAAGTACTGCTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: AASAALGEEAVLRHK*KTLLSMLLEKYCLA Trigger: GGCCAAGCAGTACTTCTCCAACAGCATGCTCAACAATGTCTTCAACTTGTGCCGCAACACTGCCTCCTCACCTAAGGCTGCAGAGGCTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGTTTTCAGGCTGCTCTTaGTTGCATCTGAACGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RSLSRQCPVPICSYPIPLFSGCS*LHLNVS Trigger: GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAA...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| 3UTR CAA 90 bp | GTTGTTGGCCCCAGCTATGTTTCCCATCATATTCCTATCGAAACCTaGCTGCCTGAGGACACTCTGCAGCTCCTTGCTGGCCCACATGTC | + |
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Preference number: 2 (lower is better) Translates to: VVGPSYVSHHIPIET*LPEDTLQLLAGPHV Trigger: GACATGTGGGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAATATGATGGGAAACATAGCTGGGGCCAACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| 3UTR-3UTR TCA 90 bp | GACAAGATATCTTCAGAGTTGCTGGTATTGCCGGTGTGGCTAGTGAGGAGTCTGGCGGCCAGCATCAGCTaGACTCAGGTTCCTCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: DKISSELLVLPVWLVRSLAASIS*TQVPQA Trigger: TGCTTGAGGAACCTGAGTTCAGCTGATGCTGGCCGC...CAGACTCCTCACTAGCCACACCGGCAATACCAGCAACTCTGAAGATATCTTGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR GCA 90 bp | GTCGTGTCTTTCTGCAAGTTGAACTTGCTTGGGCAGTCTCTTCTTAGAACCGGGCATTCTGATTGGGGCTaGGGAGGAGGTCCACCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VVSFCKLNLLGQSLLRTGHSDWG*GGGPPA Trigger: AGCTGGTGGACCTCCTCCGCAGCCCCAATCAGAATG...CCCGGTTCTAAGAAGAGACTGCCCAAGCAAGTTCAACTTGCAGAAAGACACGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAGGACAAGATATCTTCAGAGTTGCTGGTATTGCCGGTGTGGCTAGTGAGGTTTCCCATCACTCTGTaGAGCACAGGGTGGCGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: AEDKISSELLVLPVWLVRFPITL*STGWRD Trigger: GTCTCGCCACCCTGTGCTGCACAGAGTGATGGGAAA...CCTCACTAGCCACACCGGCAATACCAGCAACTCTGAAGATATCTTGTCCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCTATCGAAACCTTGCTGCCTGAGGACACTCTGCAGCTCCTTGCTGGCCCATGGTACTTCTCATCCTaGGAGCACAGGTACTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: IPIETLLPEDTLQLLAGPWYFSS*EHRYCT Trigger: TGTGCAGTACCTGTGCTCCCAGGATGAGAAGTACCA...TGGGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CAA 90 bp | GTAGCATTGAAGAAGACCTCAGGGTCCACTACTTCCCGGGACATGTaGCTGTTACCATCACACCAGCCAGAGAAAGGAATGATGACCCGG | + |
|
Preference number: 2 (lower is better) Translates to: VALKKTSGSTTSRDM*LLPSHQPEKGMMTR Trigger: CCGGGTCATCATTCCTTTCTCTGGCTGGTGTGATGGTAACAGCAACATGTCCCGGGAAGTAGTGGACCCTGAGGTCTTCTTCAATGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACGGGCGATTTGTGGCAGGCCCTTTTCCTTTATTCCAATTAACTGACTCACCACCAGCTTGCAGATaGCCCCCAGCTGATAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: GDGRFVAGPFPLFQLTDSPPACR*PPADRP Trigger: AGGTCTATCAGCTGGGGGGCATCTGCAAGCTGGTGG...TGAGTCAGTTAATTGGAATAAAGGAAAAGGGCCTGCCACAAATCGCCCGTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCATCAGCTGAACTCAGGTTCCTCAAGCAGCCTGTAGCATTGAAGAAGACCGTTTTTGGATCTCCGTaGTCCCGCTTCTCCTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PASAELRFLKQPVALKKTVFGSP*SRFSSG Trigger: TCCTGAGGAGAAGCGGGAGCACGGAGATCCAAAAAC...GGTCTTCTTCAATGCTACAGGCTGCTTGAGGAACCTGAGTTCAGCTGATGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCCCCAGCTATGTTTCCCATCATATTCCTATCGAAACCTTGCTGCCTGAGGTCTTGCTCTTTCCCATaGGGTTCAGGTAGGTCCGGA | + |
|
Preference number: 2 (lower is better) Translates to: LAPAMFPIIFLSKPCCLRSCSFP*GSGRSG Trigger: TCCGGACCTACCTGAACCTCATGGGAAAGAGCAAGA...CCTCAGGCAGCAAGGTTTCGATAGGAATATGATGGGAAACATAGCTGGGGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGTGCTGCCTGTGAACTaGAAAGGATCGTCACACCCA | + |
|
Preference number: 2 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHVLPVN*KGSSHP Trigger: TGGGTGTGACGATCCTTTGCAGTTCACAGGCAGCAC...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR-3UTR GCA 90 bp | TATACCCTCCTTGAGAGAGGTATGGCCCTTATCATTCATGTCTACCCAGCACTAGCAGGCAGTGCCCAGTaGCCATCTGTTCCTACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: YTLLERGMALIIHVYPALAGSAQ*PSVPTL Trigger: TAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGC...TAGTGCTGGGTAGACATGAATGATAAGGGCCATACCTCTCTCAAGGAGGGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CAA 90 bp | GCCTGTGAACTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTaGGTTATGCTTTTAGGCACACACACACACACACACACACACACG | + |
|
Preference number: 2 (lower is better) Translates to: ACELQRIVTPSLFLL*VMLLGTHTHTHTHT Trigger: CGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGTTCACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAGGACAAGATATCTTCAGAGTTGCTGGTATTGCCGGTGTGGCTAGTGAGGTGGGTCGTGTCTTTCTaGAAGTTGAACTTGCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: AEDKISSELLVLPVWLVRWVVSF*KLNLLG Trigger: CCCAAGCAAGTTCAACTTGCAGAAAGACACGACCCA...CCTCACTAGCCACACCGGCAATACCAGCAACTCTGAAGATATCTTGTCCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR GCA 90 bp | CCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGAACCTACCCGTGCTGCCTGTGAACTaGAAAGGATCGTCACACCCA | + |
|
Preference number: 2 (lower is better) Translates to: PLGILRPASSPKQMVNLPVLPVN*KGSSHP Trigger: TGGGTGTGACGATCCTTTGCAGTTCACAGGCAGCAC...GGGTAGGTTCACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR GCA 90 bp | GCCCAGGACCTGGGTATCCTTTCTTGGGCGAACATACACTATATGGAGGGGCAGTTGATTTCCTGTTATTaGCTTAAGTGCTCCCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: AQDLGILSWANIHYMEGQLISCY*LKCSPH Trigger: GTGAGGGGAGCACTTAAGGCAATAACAGGAAATCAA...CTGCCCCTCCATATAGTGTATGTTCGCCCAAGAAAGGATACCCAGGTCCTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACGGGCGATTTGTGGCAGGCCCTTTTCCTTTATTCCAATTAACTGACTCATGGACATCAGCCCCTTaGTGGCTGTCAGGTTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GDGRFVAGPFPLFQLTDSWTSAP*WLSGFA Trigger: TGCAAAACCTGACAGCCAGCAAGGGGCTGATGTCCA...TGAGTCAGTTAATTGGAATAAAGGAAAAGGGCCTGCCACAAATCGCCCGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR CCA 90 bp | GTTCAGCACAAGGTTCTCATACAAGATGGAGCAAGGACAGTGAGGGCTGGACGGGACACTTCCTTTACCTaGTCTATCCACCCAAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: VQHKVLIQDGARTVRAGRDTSFT*SIHPNS Trigger: GGAATTTGGGTGGATAGACCAGGTAAAGGAAGTGTC...CCGTCCAGCCCTCACTGTCCTTGCTCCATCTTGTATGAGAACCTTGTGCTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR CCA 90 bp | AACCGGGAGGTGAAGTTTCTGAGGTTGTTGGCCCCAGCTATGTTTCCCATCATAGAGTCTGGTTACCTCTaGGAACACCTGGTTTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: NREVKFLRLLAPAMFPIIESGYL*EHLVSH Trigger: ATGGGAAACCAGGTGTTCCCAGAGGTAACCAGACTC...TATGATGGGAAACATAGCTGGGGCCAACAACCTCAGAAACTTCACCTCCCGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR TCA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCATGTCTTTCTGCAAGTTaGACTTGCTTGGGCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: PQFSGCSWLHLNVSKYHACLSAS*TCLGSL Trigger: GAGACTGCCCAAGCAAGTTCAACTTGCAGAAAGACA...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000189805.7 |
||
| 3UTR-3UTR CCA 90 bp | GCCCAGGACCTGGGTATCCTTTCTTGGGCGAACATACACTATATGGAGGGGCAGTCTCAGATGTTCTTTTaGTACTTCTGTCTGCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: AQDLGILSWANIHYMEGQSQMFF*YFCLQC Trigger: ACACTGCAGACAGAAGTACCAAAAGAACATCTGAGA...CTGCCCCTCCATATAGTGTATGTTCGCCCAAGAAAGGATACCCAGGTCCTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR GCA 90 bp | TCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCATGGGTCGTGTCTTTCTaGAAGTTGAACTTGCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SSTVFRLLLVASERLQIPWVVSF*KLNLLG Trigger: CCCAAGCAAGTTCAACTTGCAGAAAGACACGACCCA...TGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000189805.7 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGCCTGACCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTTTTGGTACTTCTGTCTaGAGTGTGAAGTCTGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LSLTSGYLKTCFITKANGFGTSV*SVKSGV Trigger: GACCCCAGACTTCACACTGCAGACAGAAGTACCAAA...ACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGGTCAGGCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR TCA 90 bp | CTTCACATAGACAGGCTCACTCATGGGGTTCTCAGATGTTCTTTTGGTACTTCTTGTCTTTCTGCAAGTTaGACTTGCTTGGGCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LHIDRLTHGVLRCSFGTSCLSAS*TCLGSL Trigger: GAGACTGCCCAAGCAAGTTCAACTTGCAGAAAGACA...AGAAGTACCAAAAGAACATCTGAGAACCCCATGAGTGAGCCTGTCTATGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CAA 90 bp | AAGAATCAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTaGGTTGCATCTGAACGTCTCCAAATACCACGCAGGATGGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KNQKLFPSSTVFRLL*VASERLQIPRRMEQ Trigger: CTGCTCCATCCTGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTGATTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| 3UTR TCA 72 bp | TTGCGCAGGGCCCCGGCAGCAGCCTGCTGGACATTCTaGTTGGGGCTGCGGAGGAGGTCCACCAGCTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRRAPAAACWTF*LGLRRRSTSLQ Trigger: CTGCAAGCTGGTGGACCTCCTCCGCAGCCCCAATCAGAATGTCCAGCAGGCTGCTGCCGGGGCCCTGCGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR TCA 72 bp | TCTGCCTCCTGGTCTCCAGCTTGTTGGGGGTGCTCCTaGACACCAGGTTGCGCAGGGCCCCGGCAGCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SASWSPACWGCS*TPGCAGPRQQP Trigger: AGGCTGCTGCCGGGGCCCTGCGCAACCTGGTGTTCAGGAGCACCCCCAACAAGCTGGAGACCAGGAGGCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CCA 72 bp | GCAGGGCCCCGGCAGCAGCCTGCTGGACATTCTGATTaGGGCTGCGGAGGAGGTCCACCAGCTTGCAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: AGPRQQPAGHSD*GCGGGPPACRC Trigger: GCATCTGCAAGCTGGTGGACCTCCTCCGCAGCCCCAATCAGAATGTCCAGCAGGCTGCTGCCGGGGCCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR GCA 72 bp | AGGTCCGGATGGCATCTGAGTGGTACAGCCAGCTGCTaGCCTTGGGGTTGGTCTCTTCCTCCGGAAGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSGWHLSGTASC*PWGWSLPPEVG Trigger: GCCCACTTCCGGAGGAAGAGACCAACCCCAAGGGCAGCAGCTGGCTGTACCACTCAGATGCCATCCGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CCA 72 bp | CATTGCGGGTATTGTACTCCAGCTGGCGGTAGCGGGTaGGCACCTCGGCGTCCAGGCGGTAGGAGAGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: HCGYCTPAGGSG*APRRPGGRRGY Trigger: ATAACCTCTCCTACCGCCTGGACGCCGAGGTGCCCACCCGCTACCGCCAGCTGGAGTACAATACCCGCAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR GCA 72 bp | CTCCTCAGGAGGCTGACAGCTTCACGGATTCCGTTCTaGCTCCTGGTCTCCAGCTTGTTGGGGGTGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLRRLTASRIPF*LLVSSLLGVLL Trigger: CAGGAGCACCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGAAGCTGTCAGCCTCCTGAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR GCA 72 bp | GAGGCTCCGGACCGCACCACATCCGAATTGCCAGATTaGAGGAGACGGGCGATTTGTGGCAGGCCCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EAPDRTTSELPD*RRRAICGRPFS Trigger: GGAAAAGGGCCTGCCACAAATCGCCCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGCGGTCCGGAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR GCA 72 bp | TCAGCAGAGAGGCTCCGGACCGCACCACATCCGAATTaGCAGATTGCAGGAGACGGGCGATTTGTGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SAERLRTAPHPN*QIAGDGRFVAG Trigger: GCCTGCCACAAATCGCCCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGCGGTCCGGAGCCTCTCTGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR GCA 72 bp | GATTGGGGCTGCGGAGGAGGTCCACCAGCTTGCAGATaGCCCCCAGCTGATAGACCTGTTGCTTGGCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: DWGCGGGPPACR*PPADRPVAWQI Trigger: AATCTGCCAAGCAACAGGTCTATCAGCTGGGGGGCATCTGCAAGCTGGTGGACCTCCTCCGCAGCCCCAATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR TCA 72 bp | TTTGGATCTCCGTGCTCCCGCTTCTCCTCAGGAGGCTaGCAGCTTCACGGATTCCGTTCTGCCTCCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FGSPCSRFSSGG*QLHGFRSASWS Trigger: AGACCAGGAGGCAGAACGGAATCCGTGAAGCTGTCAGCCTCCTGAGGAGAAGCGGGAGCACGGAGATCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CCA 72 bp | AACTGGGCCCGTTCAGCACAAGGTTCTCATACAAGATaGAGCAAGGACAGTGAGGGCTGGACGGAGGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NWARSAQGSHTR*SKDSEGWTEGP Trigger: GGGACCCTCCGTCCAGCCCTCACTGTCCTTGCTCCATCTTGTATGAGAACCTTGTGCTGAACGGGCCCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR CAA 90 bp | TACTTCCCGGGACATGTTGCTGTTACCATCACACCAGCCAGAGAAAGGAATGATCTCCTGAACACCAGGTaGCGCAGGGCCCCGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YFPGHVAVTITPARERNDLLNTR*RRAPAA Trigger: TGCTGCCGGGGCCCTGCGCAACCTGGTGTTCAGGAG...ATCATTCCTTTCTCTGGCTGGTGTGATGGTAACAGCAACATGTCCCGGGAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR TCA 72 bp | GTGGGACAGCATCCCACGCTGGTATCAGAGAGGAGGTaGGGTAGGAGGCAGAATCCCACACAAGCCAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: VGQHPTLVSERR*GRRQNPTQAKQ Trigger: CTGTTTGGCTTGTGTGGGATTCTGCCTCCTACCTCACCTCCTCTCTGATACCAGCGTGGGATGCTGTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR GCA 72 bp | CTTCCTCTCTGTTCTCTGAGAAGCCTGAGCAGGCAGTaGCCAGTGCCCATCTGTTCCTACCCTATCCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPLCSLRSLSRQ*PVPICSYPIPL Trigger: CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCTCAGAGAACAGAGAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR CCA 72 bp | TACCCAAGGACAGTGTGGTGGGACAGCATCCCACGCTaGTATCAGAGAGGAGGTGAGGTAGGAGGCAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: YPRTVWWDSIPR*YQRGGEVGGRI Trigger: GATTCTGCCTCCTACCTCACCTCCTCTCTGATACCAGCGTGGGATGCTGTCCCACCACACTGTCCTTGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CCA 72 bp | TGGCTAGTGAGGAGTCTGGTTACCTCTGGGAACACCTaGTTTCCCATCACTCTGTGCAGCACAGGGTGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: WLVRSLVTSGNT*FPITLCSTGWR Trigger: TCGCCACCCTGTGCTGCACAGAGTGATGGGAAACCAGGTGTTCCCAGAGGTAACCAGACTCCTCACTAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CCA 72 bp | AGGAGATCACAAGAAGCCTACCCAAGGACAGTGTGGTaGGACAGCATCCCACGCTGGTATCAGAGAGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RRSQEAYPRTVW*DSIPRWYQRGG Trigger: ACCTCCTCTCTGATACCAGCGTGGGATGCTGTCCCACCACACTGTCCTTGGGTAGGCTTCTTGTGATCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CCA 72 bp | ATGTTGGGCCCAGCCCATCTGGCCAGCTTGAGATCATaGAAGAAGTTCCCACAATTGAGCCTGACCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: MLGPAHLASLRS*KKFPQLSLTSG Trigger: CCCAGAGGTCAGGCTCAATTGTGGGAACTTCTTCCATGATCTCAAGCTGGCCAGATGGGCTGGGCCCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CCA 72 bp | CCTGGAAGCAGGTGTGCTGGATGTAATAGGCTCCGATaGCCTGGTACTTCTCATCCTGGGAGCACAGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: PGSRCAGCNRLR*PGTSHPGSTGT Trigger: AGTACCTGTGCTCCCAGGATGAGAAGTACCAGGCCATCGGAGCCTATTACATCCAGCACACCTGCTTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CCA 72 bp | ATTGCCGGTGTGGCTAGTGAGGAGTCTGGTTACCTCTaGGAACACCTGGTTTCCCATCACTCTGTGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: IAGVASEESGYL*EHLVSHHSVQH Trigger: GTGCTGCACAGAGTGATGGGAAACCAGGTGTTCCCAGAGGTAACCAGACTCCTCACTAGCCACACCGGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGCCCAGCCTGTTTCTCTaGTTGGTTATGCTTTTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSLSRQCPVPICSYPIPLPSLFL*LVMLLG Trigger: GCCTAAAAGCATAACCAACAAGAGAAACAGGCTGGG...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGGGTCGTGTCTGCAAGTaGAACTTGCTTGGGCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRGRVCK*NLLGQS Trigger: AGACTGCCCAAGCAAGTTCAACTTGCAGACACGACC...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163260.8 |
||
| 3UTR TCA 72 bp | ATAAAGGGAGACACGGAGAGTCCCCTGTGCTGCCTGTaGACTGCAAAGGATCGTCACACCCAGCCTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IKGDTESPLCCL*TAKDRHTQPVS Trigger: AGAAACAGGCTGGGTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCCTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR CCA 72 bp | CAAAGGAGATCACAAGAAGCCTACCCAAGGACAGTGTaGTGGGACAGCATCCCACGCTGGTATCAGAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QRRSQEAYPRTV*WDSIPRWYQRG Trigger: TCCTCTCTGATACCAGCGTGGGATGCTGTCCCACCACACTGTCCTTGGGTAGGCTTCTTGTGATCTCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR CAA 90 bp | AACCTACCCAACCTTCCTCCCAGGGAAAAGAAAACTGAGTCCGAGGGCTGCAGGGTTTTCAGGCTGCTCTaGGTTGCATCTGAACGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: NLPNLPPREKKTESEGCRVFRLL*VASERL Trigger: GAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAAC...CCTGCAGCCCTCGGACTCAGTTTTCTTTTCCCTGGGAGGAAGGTTGGGTAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR TCA 72 bp | AGAGTAGTTCCGCATAGTCTGGCGGCCAGCATCAGCTaGACTCAGGTTCCTCAAGCAGCCTGTAGCATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RVVPHSLAASIS*TQVPQAACSIE Trigger: TTCAATGCTACAGGCTGCTTGAGGAACCTGAGTTCAGCTGATGCTGGCCGCCAGACTATGCGGAACTACTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR GCA 72 bp | CTCCCTCACCTGACGCTCAGCAAGCTGGGTCTGAGGTaGATTGCAACTAATTTCCAGTCTTCCTCTCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPHLTLSKLGLR*IATNFQSSSLF Trigger: GAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACCCAGCTTGCTGAGCGTCAGGTGAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR GCA 72 bp | GCTATGTTTCCCATCATATTCCTATCGAAACCTTGCTaGCTGAGGACACTCTGCAGCTCCTTGCTGGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AMFPIIFLSKPC*LRTLCSSLLAH Trigger: GTGGGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAATATGATGGGAAACATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR GCA 72 bp | CCAGCTATGTTTCCCATCATATTCCTATCGAAACCTTaGTGCCTGAGGACACTCTGCAGCTCCTTGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PAMFPIIFLSKP*CLRTLCSSLLA Trigger: GGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAATATGATGGGAAACATAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR CAA 90 bp | AATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGCCTGAGCAGGCAGTGCCCAGTTCAGGCTGCTCTTGGTaGCATCTGAACGTCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NFQSSSLFSEKPEQAVPSSGCSW*HLNVSK Trigger: TTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGA...ACTGGGCACTGCCTGCTCAGGCTTCTCAGAGAACAGAGAGGAAGACTGGAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR TCA 72 bp | TGTTTCCCATCATATTCCTATCGAAACCTTGCTGCCTaGGGACACTCTGCAGCTCCTTGCTGGCCCACATGT | + |
|
Preference number: 3 (lower is better) Translates to: CFPSYSYRNLAA*GHSAAPCWPTC Trigger: ACATGTGGGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAATATGATGGGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCCCCAGCTATGTTTCCCATCATATTCCTATCGAAACCTTGCTGCCTGAGGGTGTTGCGGCACAAGTaGAAGACATTGTTGAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LAPAMFPIIFLSKPCCLRVLRHK*KTLLSM Trigger: CATGCTCAACAATGTCTTCAACTTGTGCCGCAACAC...CCTCAGGCAGCAAGGTTTCGATAGGAATATGATGGGAAACATAGCTGGGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR TCA 72 bp | CAATCCTCAATGGACAGATCGTTTACTAGGCCACCCTaGGCCATAGAGGAATTTTTCGGTCTTACTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QSSMDRSFTRPP*AIEEFFGLTAG Trigger: CCCAGCAGTAAGACCGAAAAATTCCTCTATGGCTCAGGGTGGCCTAGTAAACGATCTGTCCATTGAGGATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR TCA 72 bp | GGCATGCTTGAAGAAGTAGATTGTTCTGGATCCCAGTaGCTGGCAAAGGAGATCACAAGAAGCCTACCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GMLEEVDCSGSQ*LAKEITRSLPK Trigger: CTTGGGTAGGCTTCTTGTGATCTCCTTTGCCAGTCACTGGGATCCAGAACAATCTACTTCTTCAAGCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CCA 72 bp | ACCTGGGTATCCTTTCTTGGGCGAACATACACTATATaGAGGGGCAGGGGTACTGTAGGTTTGATTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TWVSFLGRTYTI*RGRGTVGLISC Trigger: ACAGGAAATCAAACCTACAGTACCCCTGCCCCTCCATATAGTGTATGTTCGCCCAAGAAAGGATACCCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR CAA 90 bp | TATCATACAAGGAAACTGGGCCCGTTCAGCACAAGGTTCTCATACAAGATGGAGTCAGGCTGCTCTTGGTaGCATCTGAACGTCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: YHTRKLGPFSTRFSYKMESGCSW*HLNVSK Trigger: TTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGA...CTCCATCTTGTATGAGAACCTTGTGCTGAACGGGCCCAGTTTCCTTGTATGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR CAA 90 bp | GGTCTGAGGTGCATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGGTGTCTTTCTGCAAGTaGAACTTGCTTGGGCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLRCIATNFQSSSLFSEKVSFCK*NLLGQS Trigger: AGACTGCCCAAGCAAGTTCAACTTGCAGAAAGACAC...CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGATGAGTGAGCACATCCCCACAGTTCTGGCTTCAGGTGATCTTCTTACTAGCCTGTTTCTCTTGTaGGTTATGCTTTTAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: EEMSEHIPTVLASGDLLTSLFLL*VMLLGT Trigger: TGTGCCTAAAAGCATAACCAACAAGAGAAACAGGCT...AGTAAGAAGATCACCTGAAGCCAGAACTGTGGGGATGTGCTCACTCATCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR TCA 72 bp | GCAGACAGAACAGCTAGAGTTCATGAAGAAAGAGGCTaGTGGCTGGAATGTGGGCTAGTTGATGCCTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: ADRTARVHEERG*WLECGLVDALT Trigger: TGTTAAGGCATCAACTAGCCCACATTCCAGCCATCAGCCTCTTTCTTCATGAACTCTAGCTGTTCTGTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR GCA 72 bp | CCACAATTGAGCCTGACCTCTGGGTATCTTAAGACCTaGTTCATCACCAAAGCAAATGGTGAACCTACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PQLSLTSGYLKT*FITKANGEPTQ Trigger: TTGGGTAGGTTCACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGGTCAGGCTCAATTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR-3UTR CAA 90 bp | GTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGTCAGAGAAGAAAGTATaGACATCAGATGTAAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VMLLGTHTHTHTHTNTCVSEKKV*TSDVSP Trigger: GGGGCTTACATCTGATGTCAATACTTTCTTCTCTGA...CACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTTCCCGGGACATGTTGCTGTTACCATCACACCAGCCAGAGAAAGGAATGATTCAGAGAAGAAAGTATaGACATCAGATGTAAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: YFPGHVAVTITPARERNDSEKKV*TSDVSP Trigger: GGGGCTTACATCTGATGTCAATACTTTCTTCTCTGA...ATCATTCCTTTCTCTGGCTGGTGTGATGGTAACAGCAACATGTCCCGGGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR TCA 72 bp | ATTTGTGGCAGGCCCTTTTCCTTTATTCCAATTAACTaGCTCATACCATTGGACATCAGCCCCTTGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ICGRPFSFIPIN*LIPLDISPLLA Trigger: AGCCAGCAAGGGGCTGATGTCCAATGGTATGAGTCAGTTAATTGGAATAAAGGAAAAGGGCCTGCCACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGTCAGAGAAGAAAGTATaGACATCAGATGTAAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMSEKKV*TSDVSP Trigger: GGGGCTTACATCTGATGTCAATACTTTCTTCTCTGA...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR CCA 72 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTaGTTGCATCTGAACGTCTCCAAATACCACGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NYFHHPQFSGCS*LHLNVSKYHAG Trigger: TCCTGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| 3UTR-3UTR CAA 90 bp | AAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTGTCTTTCTGCAAGTaGAACTTGCTTGGGCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KNYFHHPQFSGCSWLHLNVSFCK*NLLGQS Trigger: AGACTGCCCAAGCAAGTTCAACTTGCAGAAAGACAC...GTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000189805.7 |
||
| 3UTR GCA 72 bp | ATCAAAAATTATTTCCATCATCCACAGTTTTCAGGCTaGTCTTGGTTGCATCTGAACGTCTCCAAATACCAC | + |
|
Preference number: 3 (lower is better) Translates to: IKNYFHHPQFSG*SWLHLNVSKYH Trigger: GTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGACCTGGGTATCCTTTCTTGGGCGAACATACACTATATGGAGGGGCAGTGCCAGCGCCCGGGGTaGCACAGCTGCCTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQDLGILSWANIHYMEGQCQRPG*HSCLGD Trigger: ATCCCCGAGGCAGCTGTGCCACCCCGGGCGCTGGCA...CTGCCCCTCCATATAGTGTATGTTCGCCCAAGAAAGGATACCCAGGTCCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CAA 72 bp | TCACGGATTCCGTTCTGCCTCCTGGTCTCCAGCTTGTaGGGGGTGCTCCTGAACACCAGGTTGCGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRIPFCLLVSSL*GVLLNTRLRRA Trigger: GGCCCTGCGCAACCTGGTGTTCAGGAGCACCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CAA 72 bp | GCTTCACGGATTCCGTTCTGCCTCCTGGTCTCCAGCTaGTTGGGGGTGCTCCTGAACACCAGGTTGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASRIPFCLLVSS*LGVLLNTRLRR Trigger: CCTGCGCAACCTGGTGTTCAGGAGCACCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CAA 72 bp | CTCAGCAGAGAGGCTCCGGACCGCACCACATCCGAATaGCCAGATTGCAGGAGACGGGCGATTTGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSREAPDRTTSE*PDCRRRAICGR Trigger: CCTGCCACAAATCGCCCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGCGGTCCGGAGCCTCTCTGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR TCA 90 bp | AGGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACATGTTGGGGGTGCTCCTaGACACCAGGTTGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RETRRVPCAACELQRIVTCWGCS*TPGCAG Trigger: CCCTGCGCAACCTGGTGTTCAGGAGCACCCCCAACA...TGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTGCTGGCCCACATGTCAGACAGGAGTAGCCGGGCAGCCTCTGCAGCCTTAACGGTCATCATCACTTaGTCCTGCACGCGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLAHMSDRSSRAASAALTVIIT*SCTRCL Trigger: CAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGT...TAAGGCTGCAGAGGCTGCCCGGCTACTCCTGTCTGACATGTGGGCCAGCAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CAA 72 bp | AGAGGCTCCGGACCGCACCACATCCGAATTGCCAGATaGCAGGAGACGGGCGATTTGTGGCAGGCCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSGPHHIRIAR*QETGDLWQALF Trigger: GAAAAGGGCCTGCCACAAATCGCCCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGCGGTCCGGAGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | GAGCCCAGTCAGCTGTTTTTGGATCTCCGTGCTCCCGCTTCTCCTCAGGAGGCTGCTGCCTGCCCGACGTaGCGGTCTTCATCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPSQLFLDLRAPASPQEAAACPT*RSSSFG Trigger: ACCAAAAGATGAAGACCGGCACGTCGGGCAGGCAGC...AGCCTCCTGAGGAGAAGCGGGAGCACGGAGATCCAAAAACAGCTGACTGGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACTGCTCCTGCACGCGCTaGCTGCCCGACGTGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHCSCTR*LPDVPV Trigger: GACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCA...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCATGCTCCTGCACGCGCTaGCTGCCCGACGTGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQFSGCSWLHLNVSKYHACSCTR*LPDVPV Trigger: GACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCA...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | GGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACACGGTCATCATCACTTaGTCCTGCACGCGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRHGESPVLPVNCKGSSHTVIIT*SCTRCL Trigger: CAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGT...GTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGGGCAGCCTCTGCAGCCTTAGGTGAGGAGGCAGTGTTGCGGCACAAGTTGACTTGGAGAAGTAGCTaGTTCTGCTCGTGGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRAASAALGEEAVLRHKLTWRSS*FCSWCR Trigger: ACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGT...CAACTTGTGCCGCAACACTGCCTCCTCACCTAAGGCTGCAGAGGCTGCCCGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | GGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACAGGGCAAAGCCAGCGTaGAGTTGTCCTGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRHGESPVLPVNCKGSSHRAKPA*SCPGPG Trigger: TCCAGGACCAGGACAACTCCACGCTGGCTTTGCCCT...GTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GACAAGATATCTTCAGAGTTGCTGGTATTGCCGGTGTGGCTAGTGAGGAGTCTGTGCCAGCGCCCGGGGTaGCACAGCTGCCTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DKISSELLVLPVWLVRSLCQRPG*HSCLGD Trigger: ATCCCCGAGGCAGCTGTGCCACCCCGGGCGCTGGCA...CAGACTCCTCACTAGCCACACCGGCAATACCAGCAACTCTGAAGATATCTTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | AGGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACGGATGGCATCTGAGTaGTACAGCCAGCTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RETRRVPCAACELQRIVTRMASE*YSQLLP Trigger: GGGCAGCAGCTGGCTGTACCACTCAGATGCCATCCG...TGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTGTCGGGCTCCCGCTTaGGGGTCCCATTGTAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRCRAPA*GSHCRS Trigger: CGATCTACAATGGGACCCTCAAGCGGGAGCCCGACA...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | GCCCAGGACCTGGGTATCCTTTCTTGGGCGAACATACACTATATGGAGGGGCAGTGCCTGAGGACACTCTaGAGCTCCTTGCTGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQDLGILSWANIHYMEGQCLRTL*SSLLAH Trigger: GTGGGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCA...CTGCCCCTCCATATAGTGTATGTTCGCCCAAGAAAGGATACCCAGGTCCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGCCCACATGTCAGACAGGAGTAGCCGGGCAGCCTCTGCAGCCTTAGGTTGGAGTGACTCAAGGTaGACGACTGGGAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLAHMSDRSSRAASAALGWSDSR*TTGKTW Trigger: CCAAGTCTTCCCAGTCGTCCACCTTGAGTCACTCCA...ACCTAAGGCTGCAGAGGCTGCCCGGCTACTCCTGTCTGACATGTGGGCCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGGCGCAGTGTGCCCCTTaGGTCACAGTAGAGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRAQCAP*VTVEVR Trigger: CCTGACCTCTACTGTGACCCAAGGGGCACACTGCGC...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTTCTGGGTGGTCTTGTaGCCCTTGCTGCCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRFWVVL*PLLPRV Trigger: CACCCTGGGCAGCAAGGGCCACAAGACCACCCAGAA...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGGAACTGGCCCTCGAGTaGCCGAAGGACAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRELALE*PKDRSL Trigger: CAAGGACCTGTCCTTCGGCCACTCGAGGGCCAGTTC...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGAACCTACCCCCTGCACGCGCTGCCTaGCCGACGTGCCGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGILRPASSPKQMVNLPPARAA*PTCRSS Trigger: TGAAGACCGGCACGTCGGGCAGGCAGCGCGTGCAGG...GGGTAGGTTCACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | TATACCCTCCTTGAGAGAGGTATGGCCCTTATCATTCATGTCTACCCAGCACTATGCTCCTGCACGCGCTaGCTGCCCGACGTGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTLLERGMALIIHVYPALCSCTR*LPDVPV Trigger: GACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCA...TAGTGCTGGGTAGACATGAATGATAAGGGCCATACCTCTCTCAAGGAGGGTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | CCACAGACTTGTCATCGCAGCGGCTGGCAGCCACGCAGTTCTGGACATAGGCCAAGAAGTAGCTGCTTCTaGTCGTGGTGCCGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQTCHRSGWQPRSSGHRPRSSCF*SWCRSC Trigger: ACAACTACGGCACCACGAGCAGAAGCAGCTACTTCT...TGGCCTATGTCCAGAACTGCGTGGCTGCCAGCCGCTGCGATGACAAGTCTGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACTGCCCAGGGTGCCCTTaGGCAGTGTGCCCCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHCPGCP*AVCPLG Trigger: ACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCA...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGAACCTACCCCCTTGCTGCCCAGGGTaGCCTTGCGCAGTGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLGILRPASSPKQMVNLPPCCPG*PCAVCP Trigger: GGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGG...GGGTAGGTTCACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGCATTCTGATTGGGGCTaGGGAGGAGGTCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRHSDWG*GGGPPA Trigger: AGCTGGTGGACCTCCTCCGCAGCCCCAATCAGAATG...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACCCGGTCTTCATCTTTTaGTCAGAGGGCAAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRHGESPVLPVNCKGSSHPVFIF*SEGKAS Trigger: GCTGGCTTTGCCCTCTGACCAAAAGATGAAGACCGG...GTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGTGGAGTGACTCAAGGTaGACGACTGGGAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSLSRQCPVPICSYPIPLWSDSR*TTGKTW Trigger: CCAAGTCTTCCCAGTCGTCCACCTTGAGTCACTCCA...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACTCCCTGCCTGGAACTTaGAGAAGTAGCTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRHGESPVLPVNCKGSSHSLPGT*RSSCFC Trigger: GCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAGGGA...GTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTGCATCGGTTCTGGGTaGTCTTGTGGCCCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRCIGSG*SCGPCC Trigger: GCAGCAAGGGCCACAAGACCACCCAGAACCGATGCA...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACTGGAGAAGTACTGCTTaGCCATCTGAGGCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRHGESPVLPVNCKGSSHWRSTA*PSEAVR Trigger: CCTCACAGCCTCAGATGGCCAAGCAGTACTTCTCCA...GTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACTGGACTTCTGCCGTTTaGCGGTCATCATCACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRHGESPVLPVNCKGSSHWTSAV*RSSSLA Trigger: AGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCA...GTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGTGGACTTCTGCCGTTTaGCGGTCATCATCACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLSRQCPVPICSYPIPLWTSAV*RSSSLA Trigger: AGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCA...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | GCTGAGGACAAGATATCTTCAGAGTTGCTGGTATTGCCGGTGTGGCTAGTGAGGTGTCGGGCTCCCGCTTaGGGGTCCCATTGTAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: AEDKISSELLVLPVWLVRCRAPA*GSHCRS Trigger: CGATCTACAATGGGACCCTCAAGCGGGAGCCCGACA...CCTCACTAGCCACACCGGCAATACCAGCAACTCTGAAGATATCTTGTCCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGATGTTGGGGGTGCTCCTaGACACCAGGTTGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRCWGCS*TPGCAG Trigger: CCCTGCGCAACCTGGTGTTCAGGAGCACCCCCAACA...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | CCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTCTTCGCGGCCAGCATCAGCTaGACTCAGGTTCCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNTTQDGAGNPSSRPEVFAASIS*TQVPQA Trigger: TGCTTGAGGAACCTGAGTTCAGCTGATGCTGGCCGC...GAAGACCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTACTGCTTGGCCATCTaGGGCTGTGAGGTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRYCLAI*GCEVIR Trigger: CCTGATGACCTCACAGCCTCAGATGGCCAAGCAGTA...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTCTTCGCTGCCTGCCCGACGTaGCGGTCTTCATCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PNTTQDGAGNPSSRPEVFAACPT*RSSSFG Trigger: ACCAAAAGATGAAGACCGGCACGTCGGGCAGGCAGC...GAAGACCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | TCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACCTGCACGCGCTGCCTaGCCGACGTGCCGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTVFRLLLVASERLQIPPARAA*PTCRSS Trigger: TGAAGACCGGCACGTCGGGCAGGCAGCGCGTGCAGG...TGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGAGAAGTAGCTGCTTCTaGTCGTGGTGCCGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLSRQCPVPICSYPIPLRSSCF*SWCRSC Trigger: ACAACTACGGCACCACGAGCAGAAGCAGCTACTTCT...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTCTTCTGCCCTTGCGCAGTGTaGCCCTTGGGTCACAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PNTTQDGAGNPSSRPEVFCPCAV*PLGHSR Trigger: TCTACTGTGACCCAAGGGGCACACTGCGCAAGGGCA...GAAGACCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAACCTTGCTGCCCAGGGTaGCCTTGCGCAGTGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YAFRHTHTHTHTHEHMREPCCPG*PCAVCP Trigger: GGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGG...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCCTTTACCTGGTCTATCCACCCAAATTCCCTTCCTTCAGCCTCTGGGAACTCTTGTGGCCCTTGCTaGCCAGGGTGCCCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSFTWSIHPNSLPSASGNSCGPC*PGCPCA Trigger: TGCGCAAGGGCACCCTGGGCAGCAAGGGCCACAAGA...GTTCCCAGAGGCTGAAGGAAGGGAATTTGGGTGGATAGACCAGGTAAAGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | GAGGAGATGAGTGAGCACATCCCCACAGTTCTGGCTTCAGGTGATCTTCTTACTTCTTGTGGCCCTTGCTaGCCAGGGTGCCCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EEMSEHIPTVLASGDLLTSCGPC*PGCPCA Trigger: TGCGCAAGGGCACCCTGGGCAGCAAGGGCCACAAGA...AGTAAGAAGATCACCTGAAGCCAGAACTGTGGGGATGTGCTCACTCATCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACACTCAATGTCCTCACTaGAGATCTTGGAACTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRHGESPVLPVNCKGSSHTQCPH*RSWNWP Trigger: GGGCCAGTTCCAAGATCTGCAGTGAGGACATTGAGT...GTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAATAGCCTAGACATGAAGGCTCTGGGGGAAGGCTCAGCTCTGTCCATCAGTGGTACAGCCAGCTaGTGCCCTTGGGGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSNSLDMKALGEGSALSISGTAS*CPWGWS Trigger: AGACCAACCCCAAGGGCAGCAGCTGGCTGTACCACT...GATGGACAGAGCTGAGCCTTCCCCCAGAGCCTTCATGTCTAGGCTATTGCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTTTCCCATCACTCTGTaGAGCACAGGGTGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRFPITL*STGWRD Trigger: GTCTCGCCACCCTGTGCTGCACAGAGTGATGGGAAA...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGTTCCTATCGAAACCTTaGTGCCTGAGGACACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLSRQCPVPICSYPIPLFLSKP*CLRTLC Trigger: GCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAA...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCGCTGGCGGTAGCGGGTaGGCACCTCGGCGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVAGGSG*APRRPG Trigger: GCCTGGACGCCGAGGTGCCCACCCGCTACCGCCAGC...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGAGCCAGCTGCTGCCCTTaGGGTTGGTCTCTTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRASCCP*GWSLPP Trigger: CGGAGGAAGAGACCAACCCCAAGGGCAGCAGCTGGC...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACGAGTCTGGTTACCTCTaGGAACACCTGGTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRHGESPVLPVNCKGSSHESGYL*EHLVSH Trigger: ATGGGAAACCAGGTGTTCCCAGAGGTAACCAGACTC...GTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCTTCTCAGCTGGGTCGTGTCTGCAAGTTGAACTTGCTTGGGCAGTCTCTTGAACCTCGGTTGGAGTaGCTCAAGGTGGACGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSSQLGRVCKLNLLGQSLEPRLE*LKVDDW Trigger: CCAGTCGTCCACCTTGAGTCACTCCAACCGAGGTTC...AAGAGACTGCCCAAGCAAGTTCAACTTGCAGACACGACCCAGCTGAGAAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGCACAAGGTTCTCATACAAGATGGAGCAAGGACAGTGAGGGCTGGACGGTTCTCCTCAGGAGGCTaGCAGCTTCACGGATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VQHKVLIQDGARTVRAGRFSSGG*QLHGFR Trigger: ACGGAATCCGTGAAGCTGTCAGCCTCCTGAGGAGAA...CCGTCCAGCCCTCACTGTCCTTGCTCCATCTTGTATGAGAACCTTGTGCTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR TCA 90 bp | ACTTCCTTTACCTGGTCTATCCACCCAAATTCCCTTCCTTCAGCCTCTGGGAACCTCTGCAGCCTTAGGTaGGGAGGCAGTGTTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSFTWSIHPNSLPSASGNLCSLR*GGSVAA Trigger: TGCCGCAACACTGCCTCCTCACCTAAGGCTGCAGAG...GTTCCCAGAGGCTGAAGGAAGGGAATTTGGGTGGATAGACCAGGTAAAGGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACTCTGCAGCCTTAGGTaGGGAGGCAGTGTTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRLCSLR*GGSVAA Trigger: TGCCGCAACACTGCCTCCTCACCTAAGGCTGCAGAG...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAGGACCTGGGTATCCTTTCTTGGGCGAACATACACTATATGGAGGGGCAGCCACGAGCCATTCCCTaGCTGGAACTTGGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AQDLGILSWANIHYMEGQPRAIP*LELGEV Trigger: TACTTCTCCAAGTTCCAGGCAGGGAATGGCTCGTGG...CTGCCCCTCCATATAGTGTATGTTCGCCCAAGAAAGGATACCCAGGTCCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | AACCTACCCAACCTTCCTCCCAGGGAAAAGAAAACTGAGTCCGAGGGCTGCAGGTGGACATCAGCCCCTTaGTGGCTGTCAGGTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLPNLPPREKKTESEGCRWTSAP*WLSGFA Trigger: TGCAAAACCTGACAGCCAGCAAGGGGCTGATGTCCA...CCTGCAGCCCTCGGACTCAGTTTTCTTTTCCCTGGGAGGAAGGTTGGGTAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | CCACAGACTTGTCATCGCAGCGGCTGGCAGCCACGCAGTTCTGGACATAGGCCATGCAGATCTGCGGCTTaGCTTGATTTTCTGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQTCHRSGWQPRSSGHRPCRSAA*LDFLHE Trigger: TTCATGCAGAAAATCAAGGCAAGCCGCAGATCTGCA...TGGCCTATGTCCAGAACTGCGTGGCTGCCAGCCGCTGCGATGACAAGTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGAGCCCAGTCAGCTGTTTTTGGATCTCCGTGCTCCCGCTTCTCCTCAACTCAATGTCCTCACTaGAGATCTGCGGCTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRGAQSAVFGSPCSRFSSTQCPH*RSAACL Trigger: AAGGCAAGCCGCAGATCTGCAGTGAGGACATTGAGT...TGAGGAGAAGCGGGAGCACGGAGATCCAAAAACAGCTGACTGGGCTCCTCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | GCTGGATGTAATAGGCTCCGATGGCCTGGTACTTCTCATCCTGGGAGCACAGGTCTCAAGGTGGACGACTaGGAAGACTTGGACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGCNRLRWPGTSHPGSTGLKVDD*EDLDFC Trigger: GCAGAAGTCCAAGTCTTCCCAGTCGTCCACCTTGAG...ACCTGTGCTCCCAGGATGAGAAGTACCAGGCCATCGGAGCCTATTACATCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTGCCAGCGCCCGGGGTaGCACAGCTGCCTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVCQRPG*HSCLGD Trigger: ATCCCCGAGGCAGCTGTGCCACCCCGGGCGCTGGCA...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGAACCTACCCGCCAGCTGCTGCCCTTaGGGTTGGTCTCTTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLGILRPASSPKQMVNLPASCCP*GWSLPP Trigger: CGGAGGAAGAGACCAACCCCAAGGGCAGCAGCTGGC...GGGTAGGTTCACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CAA 72 bp | TCAGCTGAACTCAGGTTCCTCAAGCAGCCTGTAGCATaGAAGAAGACCTCAGGGTCCACTACTTCCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAELRFLKQPVA*KKTSGSTTSRD Trigger: GTCCCGGGAAGTAGTGGACCCTGAGGTCTTCTTCAATGCTACAGGCTGCTTGAGGAACCTGAGTTCAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR TCA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCAGAACCTCGGTTGGAGTaGCTCAAGGTGGACGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQFSGCSWLHLNVSKYHAEPRLE*LKVDDW Trigger: CCAGTCGTCCACCTTGAGTCACTCCAACCGAGGTTC...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR TCA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCAGCGGCCAGCATCAGCTaGACTCAGGTTCCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQFSGCSWLHLNVSKYHAAASIS*TQVPQA Trigger: TGCTTGAGGAACCTGAGTTCAGCTGATGCTGGCCGC...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGAACCTACCCGGTCCGGATGGCATCTaGGTGGTACAGCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLGILRPASSPKQMVNLPGPDGI*VVQPAA Trigger: AGCAGCTGGCTGTACCACTCAGATGCCATCCGGACC...GGGTAGGTTCACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR TCA 90 bp | GTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGGGTCCGGATGGCATCTaGGTGGTACAGCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VMLLGTHTHTHTHTNTCVGPDGI*VVQPAA Trigger: AGCAGCTGGCTGTACCACTCAGATGCCATCCGGACC...CACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | AATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGCCTGAGCAGGCAGTGCCCAGTTACTGCTTGGCCATCTaGGGCTGTGAGGTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFQSSSLFSEKPEQAVPSYCLAI*GCEVIR Trigger: CCTGATGACCTCACAGCCTCAGATGGCCAAGCAGTA...ACTGGGCACTGCCTGCTCAGGCTTCTCAGAGAACAGAGAGGAAGACTGGAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCACGAAACCTTGCTGCCTaGGGACACTCTGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQFSGCSWLHLNVSKYHARNLAA*GHSAAP Trigger: AGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCG...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTCCCGCTTCTCCTCAGGAGGCTGACAGCTTCACGGATTCCGTTCTGCCTCCTTGCCTTGATTTTCTaGATGAAGCAGATGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLPLLLRRLTASRIPFCLLALIF*MKQMSL Trigger: CAGTGACATCTGCTTCATGCAGAAAATCAAGGCAAG...GAGGCAGAACGGAATCCGTGAAGCTGTCAGCCTCCTGAGGAGAAGCGGGAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCCCAGGGTGCCCTTaGGCAGTGTGCCCCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTCPGCP*AVCPLG Trigger: ACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCA...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGCTAGTTGATGCCTTAACAGGACACTTCCTTTACCTGGTCTATCCACCCCCACCAGCTTGCAGATaGCCCCCAGCTGATAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: CGLVDALTGHFLYLVYPPPPACR*PPADRP Trigger: AGGTCTATCAGCTGGGGGGCATCTGCAAGCTGGTGG...GGGTGGATAGACCAGGTAAAGGAAGTGTCCTGTTAAGGCATCAACTAGCCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACATTCTGATTGGGGCTaGGGAGGAGGTCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRHSDWG*GGGPPA Trigger: AGCTGGTGGACCTCCTCCGCAGCCCCAATCAGAATG...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTCTCGGTGTAGGCATTaGGGGTATTGTACTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRSRCRH*GYCTPA Trigger: AGCTGGAGTACAATACCCGCAATGCCTACACCGAGA...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGGTACAGCCAGCTGCTaGCCTTGGGGTTGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHGTASC*PWGWSL Trigger: AAGAGACCAACCCCAAGGGCAGCAGCTGGCTGTACC...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCAGGTACAGCCAGCTGCTaGCCTTGGGGTTGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQFSGCSWLHLNVSKYHAGTASC*PWGWSL Trigger: AAGAGACCAACCCCAAGGGCAGCAGCTGGCTGTACC...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCTGGCTGTCAGGTTTTaGAGGGCCCCAGCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMLAVRF*RAPAQA Trigger: GGCCTGTGCTGGGGCCCTGCAAAACCTGACAGCCAG...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGAGGTGCATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGCTGGCTGTCAGGTTTTaGAGGGCCCCAGCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLRCIATNFQSSSLFSEKLAVRF*RAPAQA Trigger: GGCCTGTGCTGGGGCCCTGCAAAACCTGACAGCCAG...CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGGGTGGCGAGACATGTTaGTCAGCAGAGAGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VMLLGTHTHTHTHTNTCVGGETC*SAERLR Trigger: CCGGAGCCTCTCTGCTGAGCAACATGTCTCGCCACC...CACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTCTCAGCTGGGTCGTGTCTGCAAGTTGAACTTGCTTGGGCAGTCTCTTGAGTTGTCCTGGTCCTaGAAGCATTCGTACGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSSQLGRVCKLNLLGQSLELSWS*KHSYAS Trigger: GCTGGCGTACGAATGCTTCCAGGACCAGGACAACTC...AAGAGACTGCCCAAGCAAGTTCAACTTGCAGACACGACCCAGCTGAGAAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGGAAGGGCAAAGCCAGCGTaGAGTTGTCCTGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLKLSCGCSPHVYKGRHGRAKPA*SCPGPG Trigger: TCCAGGACCAGGACAACTCCACGCTGGCTTTGCCCT...TCCGTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GTCGTGTCTTTCTGCAAGTTGAACTTGCTTGGGCAGTCTCTTCTTAGAACCGGGAGGGCAAAGCCAGCGTaGAGTTGTCCTGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVSFCKLNLLGQSLLRTGRAKPA*SCPGPG Trigger: TCCAGGACCAGGACAACTCCACGCTGGCTTTGCCCT...CCCGGTTCTAAGAAGAGACTGCCCAAGCAAGTTCAACTTGCAGAAAGACACGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | CTGGATGTAATAGGCTCCGATGGCCTGGTACTTCTCATCCTGGGAGCACAGGTATCCCTGCCTGGAACTTaGAGAAGTAGCTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDVIGSDGLVLLILGAQVSLPGT*RSSCFC Trigger: GCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAGGGA...TACCTGTGCTCCCAGGATGAGAAGTACCAGGCCATCGGAGCCTATTACATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | GATGCCTTAACAGGACACTTCCTTTACCTGGTCTATCCACCCAAATTCCCTTCCGCGCAGTGTGCCCCTTaGGTCACAGTAGAGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DALTGHFLYLVYPPKFPSAQCAP*VTVEVR Trigger: CCTGACCTCTACTGTGACCCAAGGGGCACACTGCGC...GGAAGGGAATTTGGGTGGATAGACCAGGTAAAGGAAGTGTCCTGTTAAGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | GATGCCTTAACAGGACACTTCCTTTACCTGGTCTATCCACCCAAATTCCCTTCCTTCTGGGTGGTCTTGTaGCCCTTGCTGCCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DALTGHFLYLVYPPKFPSFWVVL*PLLPRV Trigger: CACCCTGGGCAGCAAGGGCCACAAGACCACCCAGAA...GGAAGGGAATTTGGGTGGATAGACCAGGTAAAGGAAGTGTCCTGTTAAGGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACAACACCGGGTCTTGCTTaGAGGTGCAGGAGGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTTPGLA*RCRRAA Trigger: GGCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGT...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGAGGTACTGCACAGCCTTaGGGATGGTCAGCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRGTAQP*GWSAHY Trigger: GTAGTGGGCTGACCATCCCCAAGGCTGTGCAGTACC...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACTTCCGTTCTGCCTCCTaGTCTCCAGCTTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHFRSAS*SPACWG Trigger: CCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAA...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGATGAGTGAGCACATCCCCACAGTTCTGGCTTCAGGTGATCTTCTTACTTTCCGTTCTGCCTCCTaGTCTCCAGCTTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EEMSEHIPTVLASGDLLTFRSAS*SPACWG Trigger: CCCCCAACAAGCTGGAGACCAGGAGGCAGAACGGAA...AGTAAGAAGATCACCTGAAGCCAGAACTGTGGGGATGTGCTCACTCATCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CCA 90 bp | AAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGCTGGCGGTAGCGGGTaGGCACCTCGGCGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNYFHHPQFSGCSWLHLNAGGSG*APRRPG Trigger: GCCTGGACGCCGAGGTGCCCACCCGCTACCGCCAGC...GTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CCA 90 bp | ACTTCCTTTACCTGGTCTATCCACCCAAATTCCCTTCCTTCAGCCTCTGGGAACCTGTGCAGCACAGGGTaGCGAGACATGTTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSFTWSIHPNSLPSASGNLCSTG*RDMLLS Trigger: GCTGAGCAACATGTCTCGCCACCCTGTGCTGCACAG...GTTCCCAGAGGCTGAAGGAAGGGAATTTGGGTGGATAGACCAGGTAAAGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| CDS-3UTR CCA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACTGTGCAGCACAGGGTaGCGAGACATGTTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRLCSTG*RDMLLS Trigger: GCTGAGCAACATGTCTCGCCACCCTGTGCTGCACAG...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTCTTCCTGGTATTGCCGGTGTaGCTAGTGAGGAGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNTTQDGAGNPSSRPEVFLVLPV*LVRSLV Trigger: AACCAGACTCCTCACTAGCCACACCGGCAATACCAG...GAAGACCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CCA 90 bp | GTTCAGCACAAGGTTCTCATACAAGATGGAGCAAGGACAGTGAGGGCTGGACGGTGGAGAAGTACTGCTTaGCCATCTGAGGCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQHKVLIQDGARTVRAGRWRSTA*PSEAVR Trigger: CCTCACAGCCTCAGATGGCCAAGCAGTACTTCTCCA...CCGTCCAGCCCTCACTGTCCTTGCTCCATCTTGTATGAGAACCTTGTGCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CAA 72 bp | GTCCCTTTAATTTTTCCCTGGAATGACAGGCACATGTaGGGCCCAGCCCATCTGGCCAGCTTGAGATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLIFPWNDRHM*GPAHLASLRSW Trigger: CCATGATCTCAAGCTGGCCAGATGGGCTGGGCCCAACATGTGCCTGTCATTCCAGGGAAAAATTAAAGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| 3UTR CAA 72 bp | GGTGAGGAGGCAGTGTTGCGGCACAAGTTGAAGACATaGTTGAGCATGCTGTTGGAGAAGTACTGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GEEAVLRHKLKT*LSMLLEKYCLA Trigger: GGCCAAGCAGTACTTCTCCAACAGCATGCTCAACAATGTCTTCAACTTGTGCCGCAACACTGCCTCCTCACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CAA 72 bp | CCCAGCTATGTTTCCCATCATATTCCTATCGAAACCTaGCTGCCTGAGGACACTCTGCAGCTCCTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSYVSHHIPIET*LPEDTLQLLAG Trigger: GCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAATATGATGGGAAACATAGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR TCA 90 bp | TATCATACAAGGAAACTGGGCCCGTTCAGCACAAGGTTCTCATACAAGATGGAGTGTCGGGCTCCCGCTTaGGGGTCCCATTGTAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: YHTRKLGPFSTRFSYKMECRAPA*GSHCRS Trigger: CGATCTACAATGGGACCCTCAAGCGGGAGCCCGACA...CTCCATCTTGTATGAGAACCTTGTGCTGAACGGGCCCAGTTTCCTTGTATGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | GTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAGTGGTACAGCCAGCTaGTGCCCTTGGGGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VMLLGTHTHTHTHTNTCVSGTAS*CPWGWS Trigger: AGACCAACCCCAAGGGCAGCAGCTGGCTGTACCACT...CACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR GCA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCAGCACCACATCCGAATTaGCAGATTGCAGGAGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQFSGCSWLHLNVSKYHAAPHPN*QIAGDG Trigger: CCCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGC...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGGGTGGCGAGACATGTTaGTCAGCAGAGAGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMGGETC*SAERLR Trigger: CCGGAGCCTCTCTGCTGAGCAACATGTCTCGCCACC...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAATGCCTGAGGACACTCTaGAGCTCCTTGCTGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YAFRHTHTHTHTHEHMRECLRTL*SSLLAH Trigger: GTGGGCCAGCAAGGAGCTGCAGAGTGTCCTCAGGCA...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCACACCGGGTCTTGCTTaGAGGTGCAGGAGGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVTPGLA*RCRRAA Trigger: GGCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGT...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGCACAAGGTTCTCATACAAGATGGAGCAAGGACAGTGAGGGCTGGACGGTTGGCAGATTCATCCTaGAAGCAGGTGTGCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VQHKVLIQDGARTVRAGRLADSS*KQVCWM Trigger: CATCCAGCACACCTGCTTCCAGGATGAATCTGCCAA...CCGTCCAGCCCTCACTGTCCTTGCTCCATCTTGTATGAGAACCTTGTGCTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | AACCTACCCAACCTTCCTCCCAGGGAAAAGAAAACTGAGTCCGAGGGCTGCAGGGATAGACCTGTTGCTTaGCAGATTCATCCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLPNLPPREKKTESEGCRDRPVA*QIHPGS Trigger: GCTTCCAGGATGAATCTGCCAAGCAACAGGTCTATC...CCTGCAGCCCTCGGACTCAGTTTTCTTTTCCCTGGGAGGAAGGTTGGGTAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | TCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGGATGGCATCTGAGTaGTACAGCCAGCTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVFRLLLVASERLQIPRMASE*YSQLLP Trigger: GGGCAGCAGCTGGCTGTACCACTCAGATGCCATCCG...TGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGATGAGTGAGCACATCCCCACAGTTCTGGCTTCAGGTGATCTTCTTACTTCTGCAGCTCCTTGCTaGCCCACATGTCAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EEMSEHIPTVLASGDLLTSAAPC*PTCQTG Trigger: TCCTGTCTGACATGTGGGCCAGCAAGGAGCTGCAGA...AGTAAGAAGATCACCTGAAGCCAGAACTGTGGGGATGTGCTCACTCATCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACTCTGCAGCTCCTTGCTaGCCCACATGTCAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHSAAPC*PTCQTG Trigger: TCCTGTCTGACATGTGGGCCAGCAAGGAGCTGCAGA...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | TCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCATGTCACCCCTGTTGCTaGAGCAGCCAGTGGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVFRLLLVASERLQIPCHPCC*SSQWRT Trigger: AGTCCTCCACTGGCTGCTTCAGCAACAGGGGTGACA...TGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCTGTCACCCCTGTTGCTaGAGCAGCCAGTGGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSCHPCC*SSQWRT Trigger: AGTCCTCCACTGGCTGCTTCAGCAACAGGGGTGACA...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TATACCCTCCTTGAGAGAGGTATGGCCCTTATCATTCATGTCTACCCAGCACTAGCTGCCTGCCCGACGTaGCGGTCTTCATCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YTLLERGMALIIHVYPALAACPT*RSSSFG Trigger: ACCAAAAGATGAAGACCGGCACGTCGGGCAGGCAGC...TAGTGCTGGGTAGACATGAATGATAAGGGCCATACCTCTCTCAAGGAGGGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | CTGGATGTAATAGGCTCCGATGGCCTGGTACTTCTCATCCTGGGAGCACAGGTAGAAGACTTGGACTTCTaGCGTTTGACGGTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LDVIGSDGLVLLILGAQVEDLDF*RLTVII Trigger: GATGATGACCGTCAAACGGCAGAAGTCCAAGTCTTC...TACCTGTGCTCCCAGGATGAGAAGTACCAGGCCATCGGAGCCTATTACATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACACTTGGAGAAGTAGCTaGTTCTGCTCGTGGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHTWRSS*FCSWCR Trigger: ACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGT...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGGAACTTGGAGAAGTAGCTaGTTCTGCTCGTGGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WLKLSCGCSPHVYKGRHGTWRSS*FCSWCR Trigger: ACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGT...TCCGTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACCCACGAGCCATTCCCTaGCTGGAACTTGGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHPRAIP*LELGEV Trigger: TACTTCTCCAAGTTCCAGGCAGGGAATGGCTCGTGG...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GACAAGATATCTTCAGAGTTGCTGGTATTGCCGGTGTGGCTAGTGAGGAGTCTGCCACGAGCCATTCCCTaGCTGGAACTTGGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DKISSELLVLPVWLVRSLPRAIP*LELGEV Trigger: TACTTCTCCAAGTTCCAGGCAGGGAATGGCTCGTGG...CAGACTCCTCACTAGCCACACCGGCAATACCAGCAACTCTGAAGATATCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGGACAGCCTTCTGACCACTaGAAGTGCTGTAGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLKLSCGCSPHVYKGRHGQPSDH*KCCRSC Trigger: GCAGCTTCTACAGCACTTGCAGTGGTCAGAAGGCTG...TCCGTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCACATACACCGGGTCTTaGTTGGAGGTGCAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSTYTGS*LEVQEG Trigger: GCCCTCCTGCACCTCCAAGCAAGACCCGGTGTATGT...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAACCACCAGCTTGCAGATaGCCCCCAGCTGATAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: YAFRHTHTHTHTHEHMREPPACR*PPADRP Trigger: AGGTCTATCAGCTGGGGGGCATCTGCAAGCTGGTGG...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGTTTTTGGATCTCCGTaGTCCCGCTTCTCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHVFGSP*SRFSSG Trigger: TCCTGAGGAGAAGCGGGAGCACGGAGATCCAAAAAC...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGGACTTCCCGGGACATGTTaGTGTTACCATCACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLKLSCGCSPHVYKGRHGLPGTC*CYHHTS Trigger: GCTGGTGTGATGGTAACAGCAACATGTCCCGGGAAG...TCCGTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGAACCTACCCGCACCACATCCGAATTaGCAGATTGCAGGAGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLGILRPASSPKQMVNLPAPHPN*QIAGDG Trigger: CCCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGC...GGGTAGGTTCACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | TGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGGAAGCGTGGAGTTGTCCTaGTCCTGGAAGCATTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WLKLSCGCSPHVYKGRHGSVELS*SWKHSY Trigger: GTACGAATGCTTCCAGGACCAGGACAACTCCACGCT...TCCGTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AACCGGGAGGTGAAGTTTCTGAGGTTGTTGGCCCCAGCTATGTTTCCCATCATACCGGTCTTCATCTTTTaGTCAGAGGGCAAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NREVKFLRLLAPAMFPIIPVFIF*SEGKAS Trigger: GCTGGCTTTGCCCTCTGACCAAAAGATGAAGACCGG...TATGATGGGAAACATAGCTGGGGCCAACAACCTCAGAAACTTCACCTCCCGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAGATGAGTGAGCACATCCCCACAGTTCTGGCTTCAGGTGATCTTCTTACTCTCAAGGTGGACGACTaGGAAGACTTGGACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEMSEHIPTVLASGDLLTLKVDD*EDLDFC Trigger: GCAGAAGTCCAAGTCTTCCCAGTCGTCCACCTTGAG...AGTAAGAAGATCACCTGAAGCCAGAACTGTGGGGATGTGCTCACTCATCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAATGCATCGGTTCTGGGTaGTCTTGTGGCCCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YAFRHTHTHTHTHEHMRECIGSG*SCGPCC Trigger: GCAGCAAGGGCCACAAGACCACCCAGAACCGATGCA...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACAGAACTGGCCCTCGAGTaGCCGAAGGACAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTELALE*PKDRSL Trigger: CAAGGACCTGTCCTTCGGCCACTCGAGGGCCAGTTC...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCTGACCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGGTACTGCACAGCCTTaGGGATGGTCAGCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLTSGYLKTCFITKANGGTAQP*GWSAHY Trigger: GTAGTGGGCTGACCATCCCCAAGGCTGTGCAGTACC...ACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGGTCAGGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | ACTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTTGGTTATGCTTTTAGGGCTGGACATTCTGATTaGGGCTGCGGAGGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAKDRHTQPVSLVGYAFRAGHSD*GCGGGP Trigger: TGGACCTCCTCCGCAGCCCCAATCAGAATGTCCAGC...CCTAAAAGCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTTGGTTATGCTTTTAGGTGCTGCCCTTGGGGTTaGTCTCTTCCTCCGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAKDRHTQPVSLVGYAFRCCPWG*SLPPEV Trigger: CACTTCCGGAGGAAGAGACCAACCCCAAGGGCAGCA...CCTAAAAGCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGCCTGAGCAGGCAGTGCCCAGTGAGACGGGCGATTTGTaGCAGGCCCTTTTCCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NFQSSSLFSEKPEQAVPSETGDL*QALFLY Trigger: ATAAAGGAAAAGGGCCTGCCACAAATCGCCCGTCTC...ACTGGGCACTGCCTGCTCAGGCTTCTCAGAGAACAGAGAGGAAGACTGGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR CAA 72 bp | AAGAAGACCTCAGGGTCCACTACTTCCCGGGACATGTaGCTGTTACCATCACACCAGCCAGAGAAAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KKTSGSTTSRDM*LLPSHQPEKGM Trigger: CATTCCTTTCTCTGGCTGGTGTGATGGTAACAGCAACATGTCCCGGGAAGTAGTGGACCCTGAGGTCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CAA 72 bp | CAGGCTGAGGACAAGATATCTTCAGAGTTGCTGGTATaGCCGGTGTGGCTAGTGAGGAGTCTGGTTACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAEDKISSELLV*PVWLVRSLVTS Trigger: AGAGGTAACCAGACTCCTCACTAGCCACACCGGCAATACCAGCAACTCTGAAGATATCTTGTCCTCAGCCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| 3UTR CAA 72 bp | GCAGCCTTAGGTGAGGAGGCAGTGTTGCGGCACAAGTaGAAGACATTGTTGAGCATGCTGTTGGAGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AALGEEAVLRHK*KTLLSMLLEKY Trigger: GTACTTCTCCAACAGCATGCTCAACAATGTCTTCAACTTGTGCCGCAACACTGCCTCCTCACCTAAGGCTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR TCA 90 bp | CTTCACATAGACAGGCTCACTCATGGGGTTCTCAGATGTTCTTTTGGTACTTCTCGAAACCTTGCTGCCTaGGGACACTCTGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHIDRLTHGVLRCSFGTSRNLAA*GHSAAP Trigger: AGGAGCTGCAGAGTGTCCTCAGGCAGCAAGGTTTCG...AGAAGTACCAAAAGAACATCTGAGAACCCCATGAGTGAGCCTGTCTATGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACAACGGTCATCATCACTTaGTCCTGCACGCGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTTVIIT*SCTRCL Trigger: CAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGT...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CACATGTTGGGCCCAGCCCATCTGGCCAGCTTGAGATCATGGAAGAAGTTCCCACTTGCCTTGATTTTCTaGATGAAGCAGATGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HMLGPAHLASLRSWKKFPLALIF*MKQMSL Trigger: CAGTGACATCTGCTTCATGCAGAAAATCAAGGCAAG...TGGGAACTTCTTCCATGATCTCAAGCTGGCCAGATGGGCTGGGCCCAACATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGGGAGCACAGGTACTaGACAGCCTTGGGGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTWEHRY*TALGMV Trigger: GACCATCCCCAAGGCTGTGCAGTACCTGTGCTCCCA...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTTGGTTATGCTTTTAGGTCACGGATTCCGTTCTaGCTCCTGGTCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAKDRHTQPVSLVGYAFRSRIPF*LLVSSL Trigger: CAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGA...CCTAAAAGCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCTTTCCCATCACTCTGTaGAGCACAGGGTGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSFPITL*STGWRD Trigger: GTCTCGCCACCCTGTGCTGCACAGAGTGATGGGAAA...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCTGACCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGAGTTGTCCTGGTCCTaGAAGCATTCGTACGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLTSGYLKTCFITKANGELSWS*KHSYAS Trigger: GCTGGCGTACGAATGCTTCCAGGACCAGGACAACTC...ACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGGTCAGGCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | TCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCAGAGTTGTCCTGGTCCTaGAAGCATTCGTACGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVFRLLLVASERLQIPELSWS*KHSYAS Trigger: GCTGGCGTACGAATGCTTCCAGGACCAGGACAACTC...TGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | GATGCCTTAACAGGACACTTCCTTTACCTGGTCTATCCACCCAAATTCCCTTCCCTCAAGGTGGACGACTaGGAAGACTTGGACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DALTGHFLYLVYPPKFPSLKVDD*EDLDFC Trigger: GCAGAAGTCCAAGTCTTCCCAGTCGTCCACCTTGAG...GGAAGGGAATTTGGGTGGATAGACCAGGTAAAGGAAGTGTCCTGTTAAGGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGGCACAGCCTTGGGGATaGTCAGCCCACTACACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMAQPWG*SAHYTQ Trigger: TTGAGTGTAGTGGGCTGACCATCCCCAAGGCTGTGC...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGATGGTACTTCTCATCCTaGGAGCACAGGTACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRWYFSS*EHRYCT Trigger: TGTGCAGTACCTGTGCTCCCAGGATGAGAAGTACCA...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGCCTGAGCAGGCAGTGCCCAGTGATAGACCTGTTGCTTaGCAGATTCATCCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NFQSSSLFSEKPEQAVPSDRPVA*QIHPGS Trigger: GCTTCCAGGATGAATCTGCCAAGCAACAGGTCTATC...ACTGGGCACTGCCTGCTCAGGCTTCTCAGAGAACAGAGAGGAAGACTGGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACAGCTGGACATTCTGATTaGGGCTGCGGAGGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTAGHSD*GCGGGP Trigger: TGGACCTCCTCCGCAGCCCCAATCAGAATGTCCAGC...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACCCTTCAGCTCATCAGTaGAAGACAGGTTCCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHPSAHQ*KTGSRG Trigger: TCCTCTGGAACCTGTCTTCCACTGATGAGCTGAAGG...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGATGAGTGAGCACATCCCCACAGTTCTGGCTTCAGGTGATCTTCTTACTGAGACGGGCGATTTGTaGCAGGCCCTTTTCCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EEMSEHIPTVLASGDLLTETGDL*QALFLY Trigger: ATAAAGGAAAAGGGCCTGCCACAAATCGCCCGTCTC...AGTAAGAAGATCACCTGAAGCCAGAACTGTGGGGATGTGCTCACTCATCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGAGAGTCTGGTTACCTCTaGGAACACCTGGTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRESGYL*EHLVSH Trigger: ATGGGAAACCAGGTGTTCCCAGAGGTAACCAGACTC...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR CAA 72 bp | CTGGCCAGCTTGAGATCATGGAAGAAGTTCCCACAATaGAGCCTGACCTCTGGGTATCTTAAGACCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LASLRSWKKFPQ*SLTSGYLKTCF Trigger: GAAGCAGGTCTTAAGATACCCAGAGGTCAGGCTCAATTGTGGGAACTTCTTCCATGATCTCAAGCTGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR TCA 90 bp | ACTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTTGGTTATGCTTTTAGGTCTTGCTCTTTCCCATaGGGTTCAGGTAGGTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAKDRHTQPVSLVGYAFRSCSFP*GSGRSG Trigger: TCCGGACCTACCTGAACCTCATGGGAAAGAGCAAGA...CCTAAAAGCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCTCTTGCTCTTTCCCATaGGGTTCAGGTAGGTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSSCSFP*GSGRSG Trigger: TCCGGACCTACCTGAACCTCATGGGAAAGAGCAAGA...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGAAGACTTGGACTTCTaGCGTTTGACGGTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: CWLKLSCGCSPHVYKGRHEDLDF*RLTVII Trigger: GATGATGACCGTCAAACGGCAGAAGTCCAAGTCTTC...GTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTGCCCTTGCGCAGTGTaGCCCTTGGGTCACAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVCPCAV*PLGHSR Trigger: TCTACTGTGACCCAAGGGGCACACTGCGCAAGGGCA...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAAGTGCTGTAGAAGCTaGATCGGTTCTGGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VMLLGTHTHTHTHTNTCVKCCRS*IGSGWS Trigger: AGACCACCCAGAACCGATGCAGCTTCTACAGCACTT...CACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAACAGCCTTCTGACCACTaGAAGTGCTGTAGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YAFRHTHTHTHTHEHMREQPSDH*KCCRSC Trigger: GCAGCTTCTACAGCACTTGCAGTGGTCAGAAGGCTG...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTGGGAGCACAGGTACTaGACAGCCTTGGGGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVWEHRY*TALGMV Trigger: GACCATCCCCAAGGCTGTGCAGTACCTGTGCTCCCA...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGCCTGACCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGTTTTTGGATCTCCGTaGTCCCGCTTCTCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLTSGYLKTCFITKANGVFGSP*SRFSSG Trigger: TCCTGAGGAGAAGCGGGAGCACGGAGATCCAAAAAC...ACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGGTCAGGCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | GGTCTGAGGTGCATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGTGGACATCAGCCCCTTaGTGGCTGTCAGGTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRCIATNFQSSSLFSEKWTSAP*WLSGFA Trigger: TGCAAAACCTGACAGCCAGCAAGGGGCTGATGTCCA...CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAAAGCGTGGAGTTGTCCTaGTCCTGGAAGCATTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YAFRHTHTHTHTHEHMRESVELS*SWKHSY Trigger: GTACGAATGCTTCCAGGACCAGGACAACTCCACGCT...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACCGGTCTTCATCTTTTaGTCAGAGGGCAAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVFRLLLVASERLQIPPVFIF*SEGKAS Trigger: GCTGGCTTTGCCCTCTGACCAAAAGATGAAGACCGG...TGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAATGGAGTGACTCAAGGTaGACGACTGGGAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YAFRHTHTHTHTHEHMREWSDSR*TTGKTW Trigger: CCAAGTCTTCCCAGTCGTCCACCTTGAGTCACTCCA...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACATAGACAGGCTCACTCATGGGGTTCTCAGATGTTCTTTTGGTACTTCTGCACAGCCTTGGGGATaGTCAGCCCACTACACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LHIDRLTHGVLRCSFGTSAQPWG*SAHYTQ Trigger: TTGAGTGTAGTGGGCTGACCATCCCCAAGGCTGTGC...AGAAGTACCAAAAGAACATCTGAGAACCCCATGAGTGAGCCTGTCTATGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CCA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTGCTGCCCTTGGGGTTaGTCTCTTCCTCCGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVCCPWG*SLPPEV Trigger: CACTTCCGGAGGAAGAGACCAACCCCAAGGGCAGCA...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR CAA 72 bp | CTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTaGGTTATGCTTTTAGGCACACACACACACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LQRIVTPSLFLL*VMLLGTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR CAA 72 bp | GAATTTTTCGGTCTTACTGCTGGGGTAAGAAGAGGGTaGGGCCAAGGAGCATTCTATACCCTCCTTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EFFGLTAGVRRG*GQGAFYTLLER Trigger: TCTCTCAAGGAGGGTATAGAATGCTCCTTGGCCCAACCCTCTTCTTACCCCAGCAGTAAGACCGAAAAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR TCA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCTGGACTTCTGCCGTTTaGCGGTCATCATCACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSWTSAV*RSSSLA Trigger: AGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCA...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | GGTCTGAGGTGCATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGAGAAGTAGCTGCTTCTaGTCGTGGTGCCGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRCIATNFQSSSLFSEKRSSCF*SWCRSC Trigger: ACAACTACGGCACCACGAGCAGAAGCAGCTACTTCT...CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGTCTGACCACTGCAAGTaGTGTAGAAGCTGCATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMSDHCK*CRSCIG Trigger: ACCGATGCAGCTTCTACAGCACTTGCAGTGGTCAGA...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCATTCCTATCGAAACCTTaGTGCCTGAGGACACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVFRLLLVASERLQIPFLSKP*CLRTLC Trigger: GCAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAA...TGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCTGGTACTTCTCATCCTaGGAGCACAGGTACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSWYFSS*EHRYCT Trigger: TGTGCAGTACCTGTGCTCCCAGGATGAGAAGTACCA...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCATTGGCAGATTCATCCTaGAAGCAGGTGTGCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSTVFRLLLVASERLQIPLADSS*KQVCWM Trigger: CATCCAGCACACCTGCTTCCAGGATGAATCTGCCAA...TGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCCTTCAGCTCATCAGTaGAAGACAGGTTCCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMPSAHQ*KTGSRG Trigger: TCCTCTGGAACCTGTCTTCCACTGATGAGCTGAAGG...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR TCA 90 bp | TATACCCTCCTTGAGAGAGGTATGGCCCTTATCATTCATGTCTACCCAGCACTACACAGTGTAGCAGGCTaGGGACAAGATATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YTLLERGMALIIHVYPALHSVAG*GQDIFR Trigger: TCTGAAGATATCTTGTCCTCAGCCTGCTACACTGTG...TAGTGCTGGGTAGACATGAATGATAAGGGCCATACCTCTCTCAAGGAGGGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR TCA 90 bp | ACTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTTGGTTATGCTTTTAGGCACAGTGTAGCAGGCTaGGGACAAGATATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAKDRHTQPVSLVGYAFRHSVAG*GQDIFR Trigger: TCTGAAGATATCTTGTCCTCAGCCTGCTACACTGTG...CCTAAAAGCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTTGGTTATGCTTTTAGGAGGCTCACTGCGGCTTaGCTTGATTTTCTGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TAKDRHTQPVSLVGYAFRRLTAA*LDFLHE Trigger: TTCATGCAGAAAATCAAGGCAAGCCGCAGTGAGCCT...CCTAAAAGCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CTAGTTGATGCCTTAACAGGACACTTCCTTTACCTGGTCTATCCACCCAAATTCTCTGACCACTGCAAGTaGTGTAGAAGCTGCATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVDALTGHFLYLVYPPKFSDHCK*CRSCIG Trigger: ACCGATGCAGCTTCTACAGCACTTGCAGTGGTCAGA...GAATTTGGGTGGATAGACCAGGTAAAGGAAGTGTCCTGTTAAGGCATCAACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | AAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACACATACACCGGGTCTTaGTTGGAGGTGCAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNYFHHPQFSGCSWLHLNTYTGS*LEVQEG Trigger: GCCCTCCTGCACCTCCAAGCAAGACCCGGTGTATGT...GTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATCTCGGTGTAGGCATTaGGGGTATTGTACTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTSRCRH*GYCTPA Trigger: AGCTGGAGTACAATACCCGCAATGCCTACACCGAGA...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCAAAGGATCGTCACACCCAGCCTGTTTCTCTTGTTGGTTATGCTTTTAGGTGTAATAGGCTCCGATaGCCTGGTACTTCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAKDRHTQPVSLVGYAFRCNRLR*PGTSHP Trigger: AGGATGAGAAGTACCAGGCCATCGGAGCCTATTACA...CCTAAAAGCATAACCAACAAGAGAAACAGGCTGGGTGTGACGATCCTTTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAATGTAATAGGCTCCGATaGCCTGGTACTTCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YAFRHTHTHTHTHEHMRECNRLR*PGTSHP Trigger: AGGATGAGAAGTACCAGGCCATCGGAGCCTATTACA...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCCCAGTCAGCTGTTTTTaGATCTCCGTGCTCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVPVSCF*ISVLPL Trigger: AAGCGGGAGCACGGAGATCCAAAAACAGCTGACTGG...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR CAA 72 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTaGCATCTGAACGTCTCCAAATACCACGCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: YFHHPQFSGCSW*HLNVSKYHAGW Trigger: CCATCCTGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR TCA 90 bp | AAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACTTCTCCTCAGGAGGCTaGCAGCTTCACGGATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KNYFHHPQFSGCSWLHLNFSSGG*QLHGFR Trigger: ACGGAATCCGTGAAGCTGTCAGCCTCCTGAGGAGAA...GTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACAGAAGACTTGGACTTCTaGCGTTTGACGGTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTEDLDF*RLTVII Trigger: GATGATGACCGTCAAACGGCAGAAGTCCAAGTCTTC...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CTAGTTGATGCCTTAACAGGACACTTCCTTTACCTGGTCTATCCACCCAAATTCAGGCTCACTGCGGCTTaGCTTGATTTTCTGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVDALTGHFLYLVYPPKFRLTAA*LDFLHE Trigger: TTCATGCAGAAAATCAAGGCAAGCCGCAGTGAGCCT...GAATTTGGGTGGATAGACCAGGTAAAGGAAGTGTCCTGTTAAGGCATCAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR GCA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCAAGTGCTGTAGAAGCTaGATCGGTTCTGGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVKCCRS*IGSGWS Trigger: AGACCACCCAGAACCGATGCAGCTTCTACAGCACTT...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAATCACGGATTCCGTTCTaGCTCCTGGTCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QKLFPSSTVFRLLLVASESRIPF*LLVSSL Trigger: CAAGCTGGAGACCAGGAGGCAGAACGGAATCCGTGA...TTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCCTTGCCTTGATTTTCTaGATGAAGCAGATGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSLALIF*MKQMSL Trigger: CAGTGACATCTGCTTCATGCAGAAAATCAAGGCAAG...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | CAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACTTCCCGGGACATGTTaGTGTTACCATCACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLFPSSTVFRLLLVASELPGTC*CYHHTS Trigger: GCTGGTGTGATGGTAACAGCAACATGTCCCGGGAAG...TTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACTCCCTGCCTGGAACTTaGAGAAGTAGCTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNYFHHPQFSGCSWLHLNSLPGT*RSSCFC Trigger: GCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAGGGA...GTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CCA 90 bp | AAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACCTGGTATTGCCGGTGTaGCTAGTGAGGAGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KNYFHHPQFSGCSWLHLNLVLPV*LVRSLV Trigger: AACCAGACTCCTCACTAGCCACACCGGCAATACCAG...GTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| 3UTR CAA 72 bp | AAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTaGGTTGCATCTGAACGTCTCCAAATACCACGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLFPSSTVFRLL*VASERLQIPRR Trigger: CCTGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR GCA 90 bp | CAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAAACTCAATGTCCTCACTaGAGATCTTGGAACTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QKLFPSSTVFRLLLVASETQCPH*RSWNWP Trigger: GGGCCAGTTCCAAGATCTGCAGTGAGGACATTGAGT...TTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCCTCTTCCTCCGGAAGTaGGCAGTCATAGTTATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVLFLRK*AVIVIV Trigger: AACAATAACTATGACTGCCCACTTCCGGAGGAAGAG...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACTCTTCCTCCGGAAGTaGGCAGTCATAGTTATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKLFPSSTVFRLLLVASELFLRK*AVIVIV Trigger: AACAATAACTATGACTGCCCACTTCCGGAGGAAGAG...TTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS GCA 90 bp | GGGTGGTCTTGTGGCCCTTGCTGCCCAGGGTGCCCTTGCGCAGTGTaGCCCTTGGGTCACAGTAGAGGTCAGGCTCACTGCGGCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GWSCGPCCPGCPCAV*PLGHSRGQAHCGLP Trigger: AGGCAAGCCGCAGTGAGCCTGACCTCTACTGTGACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGGGCCACAAGACCACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS GCA 90 bp | AGCTGCATCGGTTCTGGGTGGTCTTGTGGCCCTTGCTGCCCAGGGTaGCCTTGCGCAGTGTGCCCCTTGGGTCACAGTAGAGGTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCIGSGWSCGPCCPG*PCAVCPLGHSRGQA Trigger: AGCCTGACCTCTACTGTGACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGGGCCACAAGACCACCCAGAACCGATGCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS CCA 90 bp | TGCTCCTGCACGCGCTGCCTGCCCGACGTGCCGGTCTTCATCTTTTaGTCAGAGGGCAAAGCCAGCGTGGAGTTGTCCTGGTCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSCTRCLPDVPVFIF*SEGKASVELSWSWK Trigger: CTTCCAGGACCAGGACAACTCCACGCTGGCTTTGCCCTCTGACCAAAAGATGAAGACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CAA 90 bp | GGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACACGTGGTCTTGTGGCCCTaGCTGCCCAGGGTGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRHGESPVLPVNCKGSSHVVLWP*LPRVPL Trigger: CAAGGGCACCCTGGGCAGCAAGGGCCACAAGACCAC...GTGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGGCTGGCTGTCAGGTTTaGCAGGGCCCCAGCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSLSRQCPVPICSYPIPLAGCQV*QGPSTG Trigger: GCCTGTGCTGGGGCCCTGCAAAACCTGACAGCCAGC...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS GCA 90 bp | TGCTGTAGAAGCTGCATCGGTTCTGGGTGGTCTTGTGGCCCTTGCTaGCCAGGGTGCCCTTGCGCAGTGTGCCCCTTGGGTCACAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: CCRSCIGSGWSCGPC*PGCPCAVCPLGHSR Trigger: TCTACTGTGACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGGGCCACAAGACCACCCAGAACCGATGCAGCTTCTACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS GCA 90 bp | AAGTGCTGTAGAAGCTGCATCGGTTCTGGGTGGTCTTGTGGCCCTTaGTGCCCAGGGTGCCCTTGCGCAGTGTGCCCCTTGGGTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: KCCRSCIGSGWSCGP*CPGCPCAVCPLGHS Trigger: ACTGTGACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGGGCCACAAGACCACCCAGAACCGATGCAGCTTCTACAGCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS GCA 90 bp | GACAGGTCCTTGTTGCAGGAGATAGGCGGCACATACACCGGGTCTTaGTTGGAGGTGCAGGAGGGCGGCCGCACGGGACACTTCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: DRSLLQEIGGTYTGS*LEVQEGGRTGHFLT Trigger: TGTCAAGAAGTGTCCCGTGCGGCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGTATGTGCCGCCTATCTCCTGCAACAAGGACCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS CCA 90 bp | CTTGTGGCCCTTGCTGCCCAGGGTGCCCTTGCGCAGTGTGCCCCTTaGGTCACAGTAGAGGTCAGGCTCACTGCGGCTTGCCTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVALAAQGALAQCAP*VTVEVRLTAACLDF Trigger: AAAATCAAGGCAAGCCGCAGTGAGCCTGACCTCTACTGTGACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGGGCCACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS TCA 90 bp | GGTCTTGCTTGGAGGTGCAGGAGGGCGGCCGCACGGGACACTTCTTaGCAGCCTTCTGACCACTGCAAGTGCTGTAGAAGCTGCATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLAWRCRRAAARDTS*QPSDHCKCCRSCIG Trigger: ACCGATGCAGCTTCTACAGCACTTGCAGTGGTCAGAAGGCTGTCAAGAAGTGTCCCGTGCGGCCGCCCTCCTGCACCTCCAAGCAAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGCTGCTGCCCTTGGGGTaGGTCTCTTCCTCCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSLSRQCPVPICSYPIPLLLPLG*VSSSGS Trigger: ACTTCCGGAGGAAGAGACCAACCCCAAGGGCAGCAG...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS TCA 90 bp | AGTGACTCAAGGTGGACGACTGGGAAGACTTGGACTTCTGCCGTTTaGCGGTCATCATCACTTGCTCCTGCACGCGCTGCCTGCCCGACG | + |
|
Preference number: 5 (lower is better) Translates to: SDSRWTTGKTWTSAV*RSSSLAPARAACPT Trigger: CGTCGGGCAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAAGTCTTCCCAGTCGTCCACCTTGAGTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 90 bp | CAGTGTGCCCCTTGGGTCACAGTAGAGGTCAGGCTCACTGCGGCTTaGCTTGATTTTCTGCATGAAGCAGATGTCACTGCCAGCGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QCAPWVTVEVRLTAA*LDFLHEADVTASAR Trigger: CCGGGCGCTGGCAGTGACATCTGCTTCATGCAGAAAATCAAGGCAAGCCGCAGTGAGCCTGACCTCTACTGTGACCCAAGGGGCACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTCTTCTACACCGGGTCTTGCTaGGAGGTGCAGGAGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PNTTQDGAGNPSSRPEVFYTGSC*EVQEGG Trigger: GCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGTA...GAAGACCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CAA 90 bp | GCCCAGGACCTGGGTATCCTTTCTTGGGCGAACATACACTATATGGAGGGGCAGGGGTGGCGAGACATGTaGCTCAGCAGAGAGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AQDLGILSWANIHYMEGQGWRDM*LSREAP Trigger: CGGAGCCTCTCTGCTGAGCAACATGTCTCGCCACCC...CTGCCCCTCCATATAGTGTATGTTCGCCCAAGAAAGGATACCCAGGTCCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| CDS GCA 90 bp | GACTTCTGCCGTTTGACGGTCATCATCACTTGCTCCTGCACGCGCTaGCTGCCCGACGTGCCGGTCTTCATCTTTTGGTCAGAGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DFCRLTVIITCSCTR*LPDVPVFIFWSEGK Trigger: TTTGCCCTCTGACCAAAAGATGAAGACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 90 bp | GACTGGGAAGACTTGGACTTCTGCCGTTTGACGGTCATCATCACTTaGTCCTGCACGCGCTGCCTGCCCGACGTGCCGGTCTTCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DWEDLDFCRLTVIIT*SCTRCLPDVPVFIF Trigger: AAAGATGAAGACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAAGTCTTCCCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGATCTTGTCACCCCTGTaGCTGAAGCAGCCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSLSRQCPVPICSYPIPLILSPL*LKQPVE Trigger: CTCCACTGGCTGCTTCAGCAACAGGGGTGACAAGAT...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGCACAAGGTTCTCATACAAGATGGAGCAAGGACAGTGAGGGCTGGACGGAGCCAGCTGCTGCCCTaGGGGTTGGTCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VQHKVLIQDGARTVRAGRSQLLP*GLVSSS Trigger: GGAGGAAGAGACCAACCCCAAGGGCAGCAGCTGGCT...CCGTCCAGCCCTCACTGTCCTTGCTCCATCTTGTATGAGAACCTTGTGCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| CDS GCA 90 bp | GAAGACTTGGACTTCTGCCGTTTGACGGTCATCATCACTTGCTCCTaGACGCGCTGCCTGCCCGACGTGCCGGTCTTCATCTTTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EDLDFCRLTVIITCS*TRCLPDVPVFIFWS Trigger: TGACCAAAAGATGAAGACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAAGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS-3UTR CAA 90 bp | AATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGCCTGAGCAGGCAGTGCCCAGTGAGCTGAAGCGTCTGTaGTCGGGCTCCCGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NFQSSSLFSEKPEQAVPSELKRL*SGSRLR Trigger: CCTCAAGCGGGAGCCCGACAACAGACGCTTCAGCTC...ACTGGGCACTGCCTGCTCAGGCTTCTCAGAGAACAGAGAGGAAGACTGGAAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CAA 90 bp | CCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGTCTTCCCGAAGGACAGGTCCTaGTTGCAGGAGATAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PNTTQDGAGNPSSRPEVFPKDRS*LQEIGG Trigger: GCCGCCTATCTCCTGCAACAAGGACCTGTCCTTCGG...GAAGACCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACAATCTTGTCACCCCTGTaGCTGAAGCAGCCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RETRRVPCAACELQRIVTILSPL*LKQPVE Trigger: CTCCACTGGCTGCTTCAGCAACAGGGGTGACAAGAT...TGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS GCA 90 bp | CTTGAGGGTCCCATTGTAGATCGGATATCCCCACGAGCCATTCCCTaGCTGGAACTTGGAGAAGTAGCTGCTTCTGCTCGTGGTGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: LEGPIVDRISPRAIP*LELGEVAASARGAV Trigger: TACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAGGGAATGGCTCGTGGGGATATCCGATCTACAATGGGACCCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS-3UTR CAA 90 bp | GTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGGTGGTCTTGTGGCCCTaGCTGCCCAGGGTGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VMLLGTHTHTHTHTNTCVVVLWP*LPRVPL Trigger: CAAGGGCACCCTGGGCAGCAAGGGCCACAAGACCAC...CACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CAA 90 bp | AGGGAGACACGGAGAGTCCCCTGTGCTGCCTGTGAACTGCAAAGGATCGTCACAAAGCAGCCTGTAGCATaGAAGAAGACCTCAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RETRRVPCAACELQRIVTKQPVA*KKTSGS Trigger: GGACCCTGAGGTCTTCTTCAATGCTACAGGCTGCTT...TGTGACGATCCTTTGCAGTTCACAGGCAGCACAGGGGACTCTCCGTGTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CAA 90 bp | AATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGCCTGAGCAGGCAGTGCCCAGTCTGCTGCCCTTGGGGTaGGTCTCTTCCTCCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NFQSSSLFSEKPEQAVPSLLPLG*VSSSGS Trigger: ACTTCCGGAGGAAGAGACCAACCCCAAGGGCAGCAG...ACTGGGCACTGCCTGCTCAGGCTTCTCAGAGAACAGAGAGGAAGACTGGAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS GCA 90 bp | CCCACGAGCCATTCCCTGCCTGGAACTTGGAGAAGTAGCTGCTTCTaGTCGTGGTGCCGTAGTTGTTGTAATTGTCAGCCAGCCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PTSHSLPGTWRSSCF*SWCRSCCNCQPAHH Trigger: ATGATGGGCTGGCTGACAATTACAACAACTACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAGGGAATGGCTCGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 90 bp | GATATCCCCACGAGCCATTCCCTGCCTGGAACTTGGAGAAGTAGCTaGTTCTGCTCGTGGTGCCGTAGTTGTTGTAATTGTCAGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DIPTSHSLPGTWRSS*FCSWCRSCCNCQPA Trigger: GGCTGGCTGACAATTACAACAACTACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAGGGAATGGCTCGTGGGGATATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS-3UTR CAA 90 bp | TACTTCCCGGGACATGTTGCTGTTACCATCACACCAGCCAGAGAAAGGAATGATGAGCTGAAGCGTCTGTaGTCGGGCTCCCGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YFPGHVAVTITPARERNDELKRL*SGSRLR Trigger: CCTCAAGCGGGAGCCCGACAACAGACGCTTCAGCTC...ATCATTCCTTTCTCTGGCTGGTGTGATGGTAACAGCAACATGTCCCGGGAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
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| CDS-3UTR CAA 90 bp | TATACCCTCCTTGAGAGAGGTATGGCCCTTATCATTCATGTCTACCCAGCACTATACACCGGGTCTTGCTaGGAGGTGCAGGAGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: YTLLERGMALIIHVYPALYTGSC*EVQEGG Trigger: GCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGTA...TAGTGCTGGGTAGACATGAATGATAAGGGCCATACCTCTCTCAAGGAGGGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
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| CDS-3UTR CAA 90 bp | AGGTCTTCTCAGCTGGGTCGTGTCTGCAAGTTGAACTTGCTTGGGCAGTCTCTTAGGTACTGCACAGCCTaGGGGATGGTCAGCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: RSSQLGRVCKLNLLGQSLRYCTA*GMVSPL Trigger: TAGTGGGCTGACCATCCCCAAGGCTGTGCAGTACCT...AAGAGACTGCCCAAGCAAGTTCAACTTGCAGACACGACCCAGCTGAGAAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163260.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGATGAGTGAGCACATCCCCACAGTTCTGGCTTCAGGTGATCTTCTTACTCTCCTGGTCTCCAGCTaGTTGGGGGTGCTCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EEMSEHIPTVLASGDLLTLLVSS*LGVLLN Trigger: GTTCAGGAGCACCCCCAACAAGCTGGAGACCAGGAG...AGTAAGAAGATCACCTGAAGCCAGAACTGTGGGGATGTGCTCACTCATCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CAA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGACTTCCCGGGACATGTaGCTGTTACCATCACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRTSRDM*LLPSHQ Trigger: CTGGTGTGATGGTAACAGCAACATGTCCCGGGAAGT...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS-3UTR CAA 90 bp | TATACCCTCCTTGAGAGAGGTATGGCCCTTATCATTCATGTCTACCCAGCACTAGCTGGCTGTCAGGTTTaGCAGGGCCCCAGCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YTLLERGMALIIHVYPALAGCQV*QGPSTG Trigger: GCCTGTGCTGGGGCCCTGCAAAACCTGACAGCCAGC...TAGTGCTGGGTAGACATGAATGATAAGGGCCATACCTCTCTCAAGGAGGGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGGAGCCCAGTCAGCTGTTTTTGGATCTCCGTGCTCCCGCTTCTCCTCAGATCTGCGGCTTGCCTaGATTTTCTGCATGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRGAQSAVFGSPCSRFSSDLRLA*IFCMKQ Trigger: CTGCTTCATGCAGAAAATCAAGGCAAGCCGCAGATC...TGAGGAGAAGCGGGAGCACGGAGATCCAAAAACAGCTGACTGGGCTCCTCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CAA 90 bp | CCAGCATCAGCTGAACTCAGGTTCCTCAAGCAGCCTGTAGCATTGAAGAAGACCGCCGGTCTTCATCTTTaGGTCAGAGGGCAAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PASAELRFLKQPVALKKTAGLHL*VRGQSQ Trigger: CTGGCTTTGCCCTCTGACCAAAAGATGAAGACCGGC...GGTCTTCTTCAATGCTACAGGCTGCTTGAGGAACCTGAGTTCAGCTGATGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CAA 90 bp | GTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGGACGGTCATCATCACTaGCTCCTGCACGCGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VMLLGTHTHTHTHTNTCVDGHHH*LLHALP Trigger: AGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTC...CACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCGAGCTGAAGCGTCTGTaGTCGGGCTCCCGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSELKRL*SGSRLR Trigger: CCTCAAGCGGGAGCCCGACAACAGACGCTTCAGCTC...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CAA 90 bp | AATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCCTCCTGAACACCAGGTaGCGCAGGGCCCCGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NYFHHPQFSGCSWLHLNVLLNTR*RRAPAA Trigger: TGCTGCCGGGGCCCTGCGCAACCTGGTGTTCAGGAG...GACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACGCACCACATCCGAATaGCCAGATTGCAGGAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRRTTSE*PDCRRR Trigger: CCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGCG...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGGGGTGGCGAGACATGTaGCTCAGCAGAGAGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMGWRDM*LSREAP Trigger: CGGAGCCTCTCTGCTGAGCAACATGTCTCGCCACCC...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS CCA 90 bp | AGCCATTCCCTGCCTGGAACTTGGAGAAGTAGCTGCTTCTGCTCGTaGTGCCGTAGTTGTTGTAATTGTCAGCCAGCCCATCATACATGG | + |
|
Preference number: 5 (lower is better) Translates to: SHSLPGTWRSSCFCS*CRSCCNCQPAHHTW Trigger: CCATGTATGATGGGCTGGCTGACAATTACAACAACTACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAGGGAATGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CAA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCGACGGTCATCATCACTaGCTCCTGCACGCGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSDGHHH*LLHALP Trigger: AGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTC...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CAA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCAAAGGACAGGTCCTTGTaGCAGGAGATAGGCGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PQFSGCSWLHLNVSKYHAKDRSL*QEIGGT Trigger: TGTGCCGCCTATCTCCTGCAACAAGGACCTGTCCTT...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAACCGAAGGACAGGTCCTaGTTGCAGGAGATAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: YAFRHTHTHTHTHEHMREPKDRS*LQEIGG Trigger: GCCGCCTATCTCCTGCAACAAGGACCTGTCCTTCGG...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTGAACCTACCCAGGTACTGCACAGCCTaGGGGATGGTCAGCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: PLGILRPASSPKQMVNLPRYCTA*GMVSPL Trigger: TAGTGGGCTGACCATCCCCAAGGCTGTGCAGTACCT...GGGTAGGTTCACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CAA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCTCCTGGTCTCCAGCTaGTTGGGGGTGCTCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMLLVSS*LGVLLN Trigger: GTTCAGGAGCACCCCCAACAAGCTGGAGACCAGGAG...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCTGAGCAGGCAGTGCCCAGTGCCCATCTGTTCCTACCCTATCCCCTTGTTATTGTTCATCATCTaGTCACCCCTGTTGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSLSRQCPVPICSYPIPLLLFII*SPLLLK Trigger: CTTCAGCAACAGGGGTGACAAGATGATGAACAATAA...CAAGGGGATAGGGTAGGAACAGATGGGCACTGGGCACTGCCTGCTCAGGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCAATAGCCTAGACATGAAGGCTCTGGGGGAAGGCTCAGCTCTGTCCATCTTGTTGAGCATGCTGTaGGAGAAGTACTGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSNSLDMKALGEGSALSILLSML*EKYCLA Trigger: GGCCAAGCAGTACTTCTCCAACAGCATGCTCAACAA...GATGGACAGAGCTGAGCCTTCCCCCAGAGCCTTCATGTCTAGGCTATTGCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS GCA 90 bp | CATTCCCTGCCTGGAACTTGGAGAAGTAGCTGCTTCTGCTCGTGGTaGCGTAGTTGTTGTAATTGTCAGCCAGCCCATCATACATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSLPGTWRSSCFCSW*RSCCNCQPAHHTWN Trigger: GTTCCATGTATGATGGGCTGGCTGACAATTACAACAACTACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAGGGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
||
| CDS-3UTR CAA 90 bp | AATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGCCTGAGCAGGCAGTGCCCAGTCAGCTGATAGACCTGTaGCTTGGCAGATTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NFQSSSLFSEKPEQAVPSQLIDL*LGRFIL Trigger: CAGGATGAATCTGCCAAGCAACAGGTCTATCAGCTG...ACTGGGCACTGCCTGCTCAGGCTTCTCAGAGAACAGAGAGGAAGACTGGAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACTCCTGAACACCAGGTaGCGCAGGGCCCCGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QKLFPSSTVFRLLLVASELLNTR*RRAPAA Trigger: TGCTGCCGGGGCCCTGCGCAACCTGGTGTTCAGGAG...TTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACACTGGTCTCCAGCTTGTaGGGGGTGCTCCTGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTLVSSL*GVLLNT Trigger: GGTGTTCAGGAGCACCCCCAACAAGCTGGAGACCAG...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGACACGGAAAGCAGCCTGTAGCATaGAAGAAGACCTCAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLKLSCGCSPHVYKGRHGKQPVA*KKTSGS Trigger: GGACCCTGAGGTCTTCTTCAATGCTACAGGCTGCTT...TCCGTGTCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCAGGAGACGGGCGATTaGTGGCAGGCCCTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMQETGD*WQALFL Trigger: AAGGAAAAGGGCCTGCCACAAATCGCCCGTCTCCTG...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CGTCTCCAAATACCACGCAGGATGGAGCAGGTAACCCATCTTCAAGGCCTGAGGCACAAGTTGAAGACATaGTTGAGCATGCTGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLQIPRRMEQVTHLQGLRHKLKT*LSMLLE Trigger: CTCCAACAGCATGCTCAACAATGTCTTCAACTTGTG...CCTCAGGCCTTGAAGATGGGTTACCTGCTCCATCCTGCGTGGTATTTGGAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGCCTGACCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTACACTCTGCAGCTCCTaGCTGGCCCACATGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLTSGYLKTCFITKANGTLCSS*LAHMSD Trigger: GTCTGACATGTGGGCCAGCAAGGAGCTGCAGAGTGT...ACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGGTCAGGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CAA 90 bp | TATACCCTCCTTGAGAGAGGTATGGCCCTTATCATTCATGTCTACCCAGCACTAGCCGGTCTTCATCTTTaGGTCAGAGGGCAAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YTLLERGMALIIHVYPALAGLHL*VRGQSQ Trigger: CTGGCTTTGCCCTCTGACCAAAAGATGAAGACCGGC...TAGTGCTGGGTAGACATGAATGATAAGGGCCATACCTCTCTCAAGGAGGGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CAA 90 bp | GGTCTGAGGTGCATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGGCCGGTCTTCATCTTTaGGTCAGAGGGCAAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLRCIATNFQSSSLFSEKAGLHL*VRGQSQ Trigger: CTGGCTTTGCCCTCTGACCAAAAGATGAAGACCGGC...CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | AACCGGGAGGTGAAGTTTCTGAGGTTGTTGGCCCCAGCTATGTTTCCCATCATATTGGACTTCTGCCGTTaGACGGTCATCATCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NREVKFLRLLAPAMFPIILDFCR*TVIITC Trigger: GCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAA...TATGATGGGAAACATAGCTGGGGCCAACAACCTCAGAAACTTCACCTCCCGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189805.7 |
||
| CDS-3UTR CAA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGAAGGACAGGTCCTTGTaGCAGGAGATAGGCGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMKDRSL*QEIGGT Trigger: TGTGCCGCCTATCTCCTGCAACAAGGACCTGTCCTT...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCTTGGACATCAGCCCCTaGCTGGCTGTCAGGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSLDISP*LAVRFC Trigger: GCAAAACCTGACAGCCAGCAAGGGGCTGATGTCCAA...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACACGCACCACATCCGAATaGCCAGATTGCAGGAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: LLVMLLGTHTHTHTHTNTRTTSE*PDCRRR Trigger: CCGTCTCCTGCAATCTGGCAATTCGGATGTGGTGCG...TGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGCCTGACCTCTGGGTATCTTAAGACCTGCTTCATCACCAAAGCAAATGGTTCAGAGTTGCTGGTATaGCCGGTGTGGCTAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLTSGYLKTCFITKANGSELLV*PVWLVR Trigger: CCTCACTAGCCACACCGGCAATACCAGCAACTCTGA...ACCATTTGCTTTGGTGATGAAGCAGGTCTTAAGATACCCAGAGGTCAGGCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CAA 90 bp | GGTCTGAGGTGCATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGTCAGAGTTGCTGGTATaGCCGGTGTGGCTAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLRCIATNFQSSSLFSEKSELLV*PVWLVR Trigger: CCTCACTAGCCACACCGGCAATACCAGCAACTCTGA...CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTGGCTAAAGCTTTCATGTGGGTGCAGCCCACATGTCTATAAAGGGAGATTGTTGAGCATGCTGTaGGAGAAGTACTGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCWLKLSCGCSPHVYKGRLLSML*EKYCLA Trigger: GGCCAAGCAGTACTTCTCCAACAGCATGCTCAACAA...TCTCCCTTTATAGACATGTGGGCTGCACCCACATGAAAGCTTTAGCCAGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCAATTCCTATCGAAACCTaGCTGCCTGAGGACACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PQFSGCSWLHLNVSKYHAIPIET*LPEDTL Trigger: CAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAAT...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TATACCCTCCTTGAGAGAGGTATGGCCCTTATCATTCATGTCTACCCAGCACTAACTTCCCGGGACATGTaGCTGTTACCATCACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: YTLLERGMALIIHVYPALTSRDM*LLPSHQ Trigger: CTGGTGTGATGGTAACAGCAACATGTCCCGGGAAGT...TAGTGCTGGGTAGACATGAATGATAAGGGCCATACCTCTCTCAAGGAGGGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CAA 90 bp | AAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACAGCCAGCTGCTGCCCTaGGGGTTGGTCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KNYFHHPQFSGCSWLHLNSQLLP*GLVSSS Trigger: GGAGGAAGAGACCAACCCCAAGGGCAGCAGCTGGCT...GTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCCTTTACCTGGTCTATCCACCCAAATTCCCTTCCTTCAGCCTCTGGGAACGTGTTGCGGCACAAGTaGAAGACATTGTTGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TSFTWSIHPNSLPSASGNVLRHK*KTLLSM Trigger: CATGCTCAACAATGTCTTCAACTTGTGCCGCAACAC...GTTCCCAGAGGCTGAAGGAAGGGAATTTGGGTGGATAGACCAGGTAAAGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CAA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGTTGGACTTCTGCCGTTaGACGGTCATCATCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMLDFCR*TVIITC Trigger: GCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAA...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAATTGGACTTCTGCCGTTaGACGGTCATCATCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YAFRHTHTHTHTHEHMRELDFCR*TVIITC Trigger: GCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAA...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGAGGTGCATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGTCACTGCGGCTTGCCTaGATTTTCTGCATGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLRCIATNFQSSSLFSEKSLRLA*IFCMKQ Trigger: CTGCTTCATGCAGAAAATCAAGGCAAGCCGCAGTGA...CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGAGGTGCATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGCAGCTGATAGACCTGTaGCTTGGCAGATTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLRCIATNFQSSSLFSEKQLIDL*LGRFIL Trigger: CAGGATGAATCTGCCAAGCAACAGGTCTATCAGCTG...CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACTGGTCTCCAGCTTGTaGGGGGTGCTCCTGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: QKLFPSSTVFRLLLVASELVSSL*GVLLNT Trigger: GGTGTTCAGGAGCACCCCCAACAAGCTGGAGACCAG...TTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCATTCCTATCGAAACCTaGCTGCCTGAGGACACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YFHHPQFSGCSWLHLNVSIPIET*LPEDTL Trigger: CAGAGTGTCCTCAGGCAGCAAGGTTTCGATAGGAAT...GGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACATAGACAGGCTCACTCATGGGGTTCTCAGATGTTCTTTTGGTACTTCTTCACTGCGGCTTGCCTaGATTTTCTGCATGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHIDRLTHGVLRCSFGTSSLRLA*IFCMKQ Trigger: CTGCTTCATGCAGAAAATCAAGGCAAGCCGCAGTGA...AGAAGTACCAAAAGAACATCTGAGAACCCCATGAGTGAGCCTGTCTATGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027667.13 |
||
| CDS-3UTR CAA 90 bp | CCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCACGCATTATTGTTCATCATCTaGTCACCCCTGTTGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PQFSGCSWLHLNVSKYHALLFII*SPLLLK Trigger: CTTCAGCAACAGGGGTGACAAGATGATGAACAATAA...TGCGTGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACAGGAGACGGGCGATTaGTGGCAGGCCCTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QKLFPSSTVFRLLLVASEQETGD*WQALFL Trigger: AAGGAAAAGGGCCTGCCACAAATCGCCCGTCTCCTG...TTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGCGTGAAAAGATATCTTCAGAGTaGCTGGTATTGCCGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YAFRHTHTHTHTHEHMREKISSE*LVLPVW Trigger: CCACACCGGCAATACCAGCAACTCTGAAGATATCTT...TTCACGCATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | TCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTCTCCAAATACCAAAGATATCTTCAGAGTaGCTGGTATTGCCGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSTVFRLLLVASERLQIPKISSE*LVLPVW Trigger: CCACACCGGCAATACCAGCAACTCTGAAGATATCTT...TGGTATTTGGAGACGTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGTTATGCTTTTAGGCACACACACACACACACACACACACACGAACACATGGTGTTGCGGCACAAGTaGAAGACATTGTTGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: VGYAFRHTHTHTHTHEHMVLRHK*KTLLSM Trigger: CATGCTCAACAATGTCTTCAACTTGTGCCGCAACAC...CATGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTAAAAGCATAACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAAACACTCTGCAGCTCCTaGCTGGCCCACATGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QKLFPSSTVFRLLLVASETLCSS*LAHMSD Trigger: GTCTGACATGTGGGCCAGCAAGGAGCTGCAGAGTGT...TTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGAGGTGCATTGCAACTAATTTCCAGTCTTCCTCTCTGTTCTCTGAGAAGGTGAAGTTTCTGAGGTaGTTGGCCCCAGCTATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLRCIATNFQSSSLFSEKVKFLR*LAPAMF Trigger: AAACATAGCTGGGGCCAACAACCTCAGAAACTTCAC...CTTCTCAGAGAACAGAGAGGAAGACTGGAAATTAGTTGCAATGCACCTCAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAATTGGACATCAGCCCCTaGCTGGCTGTCAGGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QKLFPSSTVFRLLLVASELDISP*LAVRFC Trigger: GCAAAACCTGACAGCCAGCAAGGGGCTGATGTCCAA...TTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACGTGAAGTTTCTGAGGTaGTTGGCCCCAGCTATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KNYFHHPQFSGCSWLHLNVKFLR*LAPAMF Trigger: AAACATAGCTGGGGCCAACAACCTCAGAAACTTCAC...GTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATTATTTCCATCATCCACAGTTTTCAGGCTGCTCTTGGTTGCATCTGAACCACAAGTTGAAGACATaGTTGAGCATGCTGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KNYFHHPQFSGCSWLHLNHKLKT*LSMLLE Trigger: CTCCAACAGCATGCTCAACAATGTCTTCAACTTGTG...GTTCAGATGCAACCAAGAGCAGCCTGAAAACTGTGGATGATGGAAATAATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
||
| CDS GCA 72 bp | AGCAGATGTCACTGCCAGCGCCCGGGGTGGCACAGCTaGCTCGGGGATAGTGCCGGCTCCAGTTCTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SRCHCQRPGWHS*LGDSAGSSSPS Trigger: AGATGGAGAACTGGAGCCGGCACTATCCCCGAGGCAGCTGTGCCACCCCGGGCGCTGGCAGTGACATCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 72 bp | TGTGGCCCTTGCTGCCCAGGGTGCCCTTGCGCAGTGTaGCCCTTGGGTCACAGTAGAGGTCAGGCTCACTGC | + |
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Preference number: 6 (lower is better) Translates to: CGPCCPGCPCAV*PLGHSRGQAHC Trigger: GCAGTGAGCCTGACCTCTACTGTGACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGGGCCACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS GCA 72 bp | AGCTGCATCGGTTCTGGGTGGTCTTGTGGCCCTTGCTaGCCAGGGTGCCCTTGCGCAGTGTGCCCCTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SCIGSGWSCGPC*PGCPCAVCPLG Trigger: ACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGGGCCACAAGACCACCCAGAACCGATGCAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CCA 72 bp | CTTGCTGCCCAGGGTGCCCTTGCGCAGTGTGCCCCTTaGGTCACAGTAGAGGTCAGGCTCACTGCGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LAAQGALAQCAP*VTVEVRLTAAC Trigger: GCAAGCCGCAGTGAGCCTGACCTCTACTGTGACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS GCA 72 bp | GGTTCTGGGTGGTCTTGTGGCCCTTGCTGCCCAGGGTaGCCTTGCGCAGTGTGCCCCTTGGGTCACAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GSGWSCGPCCPG*PCAVCPLGHSR Trigger: TCTACTGTGACCCAAGGGGCACACTGCGCAAGGGCACCCTGGGCAGCAAGGGCCACAAGACCACCCAGAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS GCA 72 bp | TTGTTGCAGGAGATAGGCGGCACATACACCGGGTCTTaGTTGGAGGTGCAGGAGGGCGGCCGCACGGGACAC | + |
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Preference number: 6 (lower is better) Translates to: LLQEIGGTYTGS*LEVQEGGRTGH Trigger: GTGTCCCGTGCGGCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGTATGTGCCGCCTATCTCCTGCAACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CAA 72 bp | TTGCAGGAGATAGGCGGCACATACACCGGGTCTTGCTaGGAGGTGCAGGAGGGCGGCCGCACGGGACACTTC | + |
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Preference number: 6 (lower is better) Translates to: LQEIGGTYTGSC*EVQEGGRTGHF Trigger: GAAGTGTCCCGTGCGGCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGTATGTGCCGCCTATCTCCTGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CAA 72 bp | CTTGTTGCAGGAGATAGGCGGCACATACACCGGGTCTaGCTTGGAGGTGCAGGAGGGCGGCCGCACGGGACA | + |
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Preference number: 6 (lower is better) Translates to: LVAGDRRHIHRV*LGGAGGRPHGT Trigger: TGTCCCGTGCGGCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGTATGTGCCGCCTATCTCCTGCAACAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CAA 90 bp | AGGTCCTTGTTGCAGGAGATAGGCGGCACATACACCGGGTCTTGCTaGGAGGTGCAGGAGGGCGGCCGCACGGGACACTTCTTGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: RSLLQEIGGTYTGSC*EVQEGGRTGHFLTA Trigger: GGCTGTCAAGAAGTGTCCCGTGCGGCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGTATGTGCCGCCTATCTCCTGCAACAAGGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CAA 90 bp | GGACAGGTCCTTGTTGCAGGAGATAGGCGGCACATACACCGGGTCTaGCTTGGAGGTGCAGGAGGGCGGCCGCACGGGACACTTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: GQVLVAGDRRHIHRV*LGGAGGRPHGTLLD Trigger: GTCAAGAAGTGTCCCGTGCGGCCGCCCTCCTGCACCTCCAAGCAAGACCCGGTGTATGTGCCGCCTATCTCCTGCAACAAGGACCTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS GCA 72 bp | GACTTGGACTTCTGCCGTTTGACGGTCATCATCACTTaGTCCTGCACGCGCTGCCTGCCCGACGTGCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: DLDFCRLTVIIT*SCTRCLPDVPV Trigger: GACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 72 bp | GACTTCTGCCGTTTGACGGTCATCATCACTTGCTCCTaGACGCGCTGCCTGCCCGACGTGCCGGTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: DFCRLTVIITCS*TRCLPDVPVFI Trigger: GATGAAGACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS CCA 72 bp | TCAGAGGGCAAAGCCAGCGTGGAGTTGTCCTGGTCCTaGAAGCATTCGTACGCCAGCGCGGTCTTGAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: SEGKASVELSWS*KHSYASAVLSG Trigger: TCCGCTCAAGACCGCGCTGGCGTACGAATGCTTCCAGGACCAGGACAACTCCACGCTGGCTTTGCCCTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS CAA 72 bp | AGACTTGGACTTCTGCCGTTTGACGGTCATCATCACTaGCTCCTGCACGCGCTGCCTGCCCGACGTGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: RLGLLPFDGHHH*LLHALPARRAG Trigger: ACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAAGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS CAA 72 bp | GAACTGGCCCTCGAGTGGCCGAAGGACAGGTCCTTGTaGCAGGAGATAGGCGGCACATACACCGGGTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ELALEWPKDRSL*QEIGGTYTGSC Trigger: GCAAGACCCGGTGTATGTGCCGCCTATCTCCTGCAACAAGGACCTGTCCTTCGGCCACTCGAGGGCCAGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CAA 72 bp | TTGGAACTGGCCCTCGAGTGGCCGAAGGACAGGTCCTaGTTGCAGGAGATAGGCGGCACATACACCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LELALEWPKDRS*LQEIGGTYTGS Trigger: AGACCCGGTGTATGTGCCGCCTATCTCCTGCAACAAGGACCTGTCCTTCGGCCACTCGAGGGCCAGTTCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CAA 90 bp | CGACTGGGAAGACTTGGACTTCTGCCGTTTGACGGTCATCATCACTaGCTCCTGCACGCGCTGCCTGCCCGACGTGCCGGTCTTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: RLGRLGLLPFDGHHH*LLHALPARRAGLHL Trigger: AAGATGAAGACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAAGTCTTCCCAGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS CAA 90 bp | CAGATCTTGGAACTGGCCCTCGAGTGGCCGAAGGACAGGTCCTTGTaGCAGGAGATAGGCGGCACATACACCGGGTCTTGCTTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: QILELALEWPKDRSL*QEIGGTYTGSCLEV Trigger: CACCTCCAAGCAAGACCCGGTGTATGTGCCGCCTATCTCCTGCAACAAGGACCTGTCCTTCGGCCACTCGAGGGCCAGTTCCAAGATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CAA 90 bp | CTGCAGATCTTGGAACTGGCCCTCGAGTGGCCGAAGGACAGGTCCTaGTTGCAGGAGATAGGCGGCACATACACCGGGTCTTGCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LQILELALEWPKDRS*LQEIGGTYTGSCLE Trigger: CTCCAAGCAAGACCCGGTGTATGTGCCGCCTATCTCCTGCAACAAGGACCTGTCCTTCGGCCACTCGAGGGCCAGTTCCAAGATCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS TCA 72 bp | AGGTGGACGACTGGGAAGACTTGGACTTCTGCCGTTTaGCGGTCATCATCACTTGCTCCTGCACGCGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RWTTGKTWTSAV*RSSSLAPARAA Trigger: GGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAAGTCTTCCCAGTCGTCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 72 bp | CGTTTGACGGTCATCATCACTTGCTCCTGCACGCGCTaGCTGCCCGACGTGCCGGTCTTCATCTTTTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RLTVIITCSCTR*LPDVPVFIFWS Trigger: TGACCAAAAGATGAAGACCGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 72 bp | ATGGCCTGGTACTTCTCATCCTGGGAGCACAGGTACTaGACAGCCTTGGGGATGGTCAGCCCACTACACTCA | + |
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Preference number: 6 (lower is better) Translates to: MAWYFSSWEHRY*TALGMVSPLHS Trigger: TGAGTGTAGTGGGCTGACCATCCCCAAGGCTGTGCAGTACCTGTGCTCCCAGGATGAGAAGTACCAGGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CCA 72 bp | ATGTCCTCACTGCAGATCTTGGAACTGGCCCTCGAGTaGCCGAAGGACAGGTCCTTGTTGCAGGAGATAGGC | + |
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Preference number: 6 (lower is better) Translates to: MSSLQILELALE*PKDRSLLQEIG Trigger: GCCTATCTCCTGCAACAAGGACCTGTCCTTCGGCCACTCGAGGGCCAGTTCCAAGATCTGCAGTGAGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CCA 72 bp | CATCCTGGGAGCACAGGTACTGCACAGCCTTGGGGATaGTCAGCCCACTACACTCAATGTCCTCACTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: HPGSTGTAQPWG*SAHYTQCPHCR Trigger: TCTGCAGTGAGGACATTGAGTGTAGTGGGCTGACCATCCCCAAGGCTGTGCAGTACCTGTGCTCCCAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CAA 72 bp | AAGGTGGACGACTGGGAAGACTTGGACTTCTGCCGTTaGACGGTCATCATCACTTGCTCCTGCACGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KVDDWEDLDFCR*TVIITCSCTRC Trigger: GCAGCGCGTGCAGGAGCAAGTGATGATGACCGTCAAACGGCAGAAGTCCAAGTCTTCCCAGTCGTCCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 72 bp | CCCATTGTAGATCGGATATCCCCACGAGCCATTCCCTaGCTGGAACTTGGAGAAGTAGCTGCTTCTGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: PIVDRISPRAIP*LELGEVAASAR Trigger: ACGAGCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAGGGAATGGCTCGTGGGGATATCCGATCTACAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 72 bp | CCTTGGGTCACAGTAGAGGTCAGGCTCACTGCGGCTTaGCTTGATTTTCTGCATGAAGCAGATGTCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: PWVTVEVRLTAA*LDFLHEADVTA Trigger: GGCAGTGACATCTGCTTCATGCAGAAAATCAAGGCAAGCCGCAGTGAGCCTGACCTCTACTGTGACCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 |
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| CDS CCA 72 bp | CTGCCTGGAACTTGGAGAAGTAGCTGCTTCTGCTCGTaGTGCCGTAGTTGTTGTAATTGTCAGCCAGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LPGTWRSSCFCS*CRSCCNCQPAH Trigger: ATGGGCTGGCTGACAATTACAACAACTACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGTTCCAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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| CDS GCA 72 bp | CCTGGAACTTGGAGAAGTAGCTGCTTCTGCTCGTGGTaGCGTAGTTGTTGTAATTGTCAGCCAGCCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: PGTWRSSCFCSW*RSCCNCQPAHH Trigger: ATGATGGGCTGGCTGACAATTACAACAACTACGGCACCACGAGCAGAAGCAGCTACTTCTCCAAGTTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027667.13 ENSMUST00000163260.8 ENSMUST00000189805.7 |
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