Pregenerated sensors for PKNOX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035934Ensembl transcript IDs: ENSMUST00000039674.13, ENSMUST00000080754.12, ENSMUST00000175938.9, ENSMUST00000177218.8, ENSMUST00000177444.8, ENSMUST00000188057.7, ENSMUST00000188348.7
Found 449 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATGGTGGCATTGTCTGAGGACAGGGACTGCAGGTTGTCCAAGTTaGTGGAACCATCAGGGTTCGTCCCTGGGGTGCCACCCTGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: PWWHCLRTGTAGCPS*WNHQGSSLGCHPAV Trigger: AACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAATGCCACCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR CCA 90 bp | CGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGCCACAGGGTaGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: RKTHVWSVLSFTATG*EGTGGADAKHGVCG Trigger: TCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCACCCTGTGGCTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR GCA 90 bp | TTGATGGAACCATCAGGGTTCGTCCCTGGGGTGCCACCCTGCTGTTaGAGAACCCCAGCAGCAATGGAATTGGGCCAGAATCTTTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: LMEPSGFVPGVPPCC*RTPAAMELGQNLWV Trigger: CACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGGTTCCATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR GCA 90 bp | ATTGCCTGCTGCATGGCCATGGTGGCATTGTCTGAGGACAGGGACTaGAGGTTGTCCAAGTTGATGGAACCATCAGGGTTCGTCCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: IACCMAMVALSEDRD*RLSKLMEPSGFVPG Trigger: CCCAGGGACGAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAATGCCACCATGGCCATGCAGCAGGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR CCA 90 bp | GTCCATGGCTGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTaGAGCCCTGTGCAGTCCACGTTCCACTCTGATATGAAGGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: VHGCCAKRQGPGRVS*SPVQSTFHSDMKGV Trigger: CACACCCTTCATATCAGAGTGGAACGTGGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCAGCCATGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR CCA 90 bp | GGACTGCAGGTTGTCCAAGTTGATGGAACCATCAGGGTTCGTCCCTaGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATGGAATT | + |
|
Preference number: 1 (lower is better) Translates to: GLQVVQVDGTIRVRP*GATLLLQNPSSNGI Trigger: AATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR TCA 90 bp | TTGAGAATTGACGGTTGTCATGGCGATGTTGCCCTGCTGGAGTGCTaGGGCTGGGACCACAATCCCCTGGGGGTTATTGGAGACTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: LRIDGCHGDVALLEC*GWDHNPLGVIGDSR Trigger: TCTGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCCTCAGCACTCCAGCAGGGCAACATCGCCATGACAACCGTCAATTCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR GCA 90 bp | TCCAAGTTGATGGAACCATCAGGGTTCGTCCCTGGGGTGCCACCCTaGTGTTGCAGAACCCCAGCAGCAATGGAATTGGGCCAGAATCTT | + |
|
Preference number: 1 (lower is better) Translates to: SKLMEPSGFVPGVPP*CCRTPAAMELGQNL Trigger: AAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGGTTCCATCAACTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR TCA 90 bp | CCAGCAGCAATGGAATTGGGCCAGAATCTTTGGGTGGGCCGGTGCTaGGACTTGATTTTCTTGGCTTTGGGAGCAGGATCTGGGTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: PAAMELGQNLWVGRC*DLIFLALGAGSGLL Trigger: CAGCAACCCAGATCCTGCTCCCAAAGCCAAGAAAATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR GCA 90 bp | GGGAAAATGTTAGACCCCTTCTTTCTCATCCTTCCCTCCCAAGTCTaGCCCTTAGCAAAGGTTCGCTCTGCAAGCAGCGCCTGTCCACCT | + |
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Preference number: 1 (lower is better) Translates to: GKMLDPFFLILPSQV*PLAKVRSASSACPP Trigger: AGGTGGACAGGCGCTGCTTGCAGAGCGAACCTTTGCTAAGGGGCAGACTTGGGAGGGAAGGATGAGAAAGAAGGGGTCTAACATTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR GCA 90 bp | AAGGTTAACCTGTGTATTCTGGATCTGGATGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACCTTGGGAGGTTACCATGGTAACCGG | + |
|
Preference number: 1 (lower is better) Translates to: KVNLCILDLDGSLGD*LGDHLTLGGYHGNR Trigger: CCGGTTACCATGGTAACCTCCCAAGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACACAGGTTAACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR GCA 90 bp | TCCGTGCCATCCAATGAATCATCATGTGCAGCCATCATTGCCTGCTaGATGGCCATGGTGGCATTGTCTGAGGACAGGGACTGCAGGTTG | + |
|
Preference number: 1 (lower is better) Translates to: SVPSNESSCAAIIAC*MAMVALSEDRDCRL Trigger: CAACCTGCAGTCCCTGTCCTCAGACAATGCCACCATGGCCATGCAGCAGGCAATGATGGCTGCACATGATGATTCATTGGATGGCACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR GCA 90 bp | TCTTCCGTGCCATCCAATGAATCATCATGTGCAGCCATCATTGCCTaGTGCATGGCCATGGTGGCATTGTCTGAGGACAGGGACTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SSVPSNESSCAAIIA*CMAMVALSEDRDCR Trigger: CCTGCAGTCCCTGTCCTCAGACAATGCCACCATGGCCATGCAGCAGGCAATGATGGCTGCACATGATGATTCATTGGATGGCACGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR CCA 90 bp | TCTGATATGAAGGGTGTGGTGTTGTCTCAGGCCCTCCCACTCCTCTaGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: SDMKGVVLSQALPLL*PLVMHLGSFLSVSV Trigger: GACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAGGAGTGGGAGGGCCTGAGACAACACCACACCCTTCATATCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR CCA 90 bp | CAAAGGTTCGCTCTGCAAGCAGCGCCTGTCCACCTCACAGGGCAGTaGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGT | + |
|
Preference number: 1 (lower is better) Translates to: QRFALQAAPVHLTGQ*LVNKSSLFPCGAMG Trigger: ACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTGGACAGGCGCTGCTTGCAGAGCGAACCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR TCA 90 bp | CACTCCTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTaGGTGTCTTTCAAGGGAGCTCAGATTCTCCTGGGGGAAAATGTT | + |
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Preference number: 1 (lower is better) Translates to: HSSGHWLCIWAPFCP*VSFKGAQILLGENV Trigger: AACATTTTCCCCCAGGAGAATCTGAGCTCCCTTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAGGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR GCA 90 bp | GTGGCCACATTCAGTACTGGTTTGGTGGATACATCAGAAGGAGGTTaGGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTAGA | + |
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Preference number: 1 (lower is better) Translates to: VATFSTGLVDTSEGG*VTLGRWKGLGGRCR Trigger: TCTACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGATGTATCCACCAAACCAGTACTGAATGTGGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR GCA 90 bp | AGATTGTCCAGTTCTGGGTCATCGCTGAAGAAGGGTTTGTGTTCCTaGTCCTGCTGGTGGACAAAGTTCTCGATGTCCACATCAAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: RLSSSGSSLKKGLCS*SCWWTKFSMSTSKL Trigger: CAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAGCAGGAACACAAACCCTTCTTCAGCGATGACCCAGAACTGGACAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR CCA 90 bp | GGTTTGGTGGATACATCAGAAGGAGGTTGCGTAACATTAGGCAGGTaGAAGGGGCTAGGAGGGAGATGTAGACATGTGTATCCATGTGCA | + |
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Preference number: 1 (lower is better) Translates to: GLVDTSEGGCVTLGR*KGLGGRCRHVYPCA Trigger: TGCACATGGATACACATGTCTACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGATGTATCCACCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR TCA 90 bp | AATGCTTCTTTCCAATGTTTCTTCTGCCTTCTCTGGAGAATAGAATaGAGGAGGAGGCCAGAAGCTGGTAGTGCCAGCTTGGGAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: NASFQCFFCLLWRIE*RRRPEAGSASLGAE Trigger: CTCTGCTCCCAAGCTGGCACTACCAGCTTCTGGCCTCCTCCTTCATTCTATTCTCCAGAGAAGGCAGAAGAAACATTGGAAAGAAGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR GCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTaGATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTT | + |
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Preference number: 1 (lower is better) Translates to: FSLKLGGWKGAGCLL*ISSSYDSGKLGPNF Trigger: AAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
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| 3UTR CCA 90 bp | AAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATCTCTaGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: KQIKSFSMRSHGCHL*YSVSPDLTLSFFSG Trigger: GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
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| 3UTR CCA 90 bp | ATGTTGAGTCCTGAAGGTAAGAGCAGTAGCACCTTCTTCAGACCCTaGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTTCTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: MLSPEGKSSSTFFRP*LPIGTMLLSNVSSA Trigger: GGCAGAAGAAACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCTACTGCTCTTACCTTCAGGACTCAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR GCA 90 bp | AGAGCAGTAGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATaGTTCTTTCCAATGTTTCTTCTGCCTTCTCTGGAGAATAGAATG | + |
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Preference number: 1 (lower is better) Translates to: RAVAPSSDPGFPLGQ*FFPMFLLPSLENRM Trigger: CATTCTATTCTCCAGAGAAGGCAGAAGAAACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCTACTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR TCA 90 bp | GTATGCACACATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTaGGTGGAGGAATTTATGTGTGGATGTATGTACTTTAACAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: VCTHVRAEEGSLSRC*VEEFMCGCMYFNKK Trigger: TTTCTTGTTAAAGTACATACATCCACACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACATGTGTGCATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR-3UTR TCA 90 bp | GACACTCCTTTCCTGCTCGGTGACCAGCGCAATCTGGGCTGCCTGACTACTCCACAAAGCTGGCGGAGGTaGTGCACTCGGAGCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: DTPFLLGDQRNLGCLTTPQSWRR*CTRSPG Trigger: CCCAGGGCTCCGAGTGCATCACCTCCGCCAGCTTTG...TGGAGTAGTCAGGCAGCCCAGATTGCGCTGGTCACCGAGCAGGAAAGGAGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGGGGGGCTGGGGTCTCTaGAGAACTCCATCTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: VGGDRRSRCQAWCVWISWGGWGL*RTPSEG Trigger: ACCCTCAGATGGAGTTCTTCAGAGACCCCAGCCCCC...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCTCCTCTAGCTCCTCCTCCTCCTCTTCCTCCTCCTCCATATCATCTTCAGCCCTGCTGGAGTGCTaGGGCTGGGACCACAATCCC | + |
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Preference number: 2 (lower is better) Translates to: ASSSSSSSSSSSSSISSSALLEC*GWDHNP Trigger: GGGATTGTGGTCCCAGCCTCAGCACTCCAGCAGGGC...TGAAGATGATATGGAGGAGGAGGAAGAGGAGGAGGAGGAGCTAGAGGAGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR CCA 90 bp | AACCATCAGGGTTCGTCCCTGGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGGGGACCACAATCCCCTaGGGGTTATTGGAGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: NHQGSSLGCHPAVAEPQQGTTIP*GLLETP Trigger: TGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCC...CTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATGGAATTGGGCCAGAATCTGGATGGCTCCCTaGGGGATTGCTTGGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: LGCHPAVAEPQQQWNWARIWMAP*GIAWVT Trigger: GGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGAT...TCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR CAA 90 bp | GCCATGGTGGCATTGTCTGAGGACAGGGACTGCAGGTTGTCCAAGTaGATGGAACCATCAGGGTTCGTCCCTGGGGTGCCACCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: AMVALSEDRDCRLSK*MEPSGFVPGVPPCC Trigger: ACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAATGCCACCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGTCTTCTCAGGCTGTTTaGCTGGCCCCAGCAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: VGGDRRSRCQAWCVWISWSSQAV*LAPAME Trigger: CTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGA...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR CAA 90 bp | TGCTGCATGGCCATGGTGGCATTGTCTGAGGACAGGGACTGCAGGTaGTCCAAGTTGATGGAACCATCAGGGTTCGTCCCTGGGGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: CCMAMVALSEDRDCR*SKLMEPSGFVPGVP Trigger: TGGCACCCCAGGGACGAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAATGCCACCATGGCCATGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR GCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAAGTCCATGGCTGCTGTaGCAAGAGACAGGGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RCLSSQAVWLAPAMECSVSPWLL*QETGSW Trigger: CCAGGACCCTGTCTCTTGGCACAGCAGCCATGGACT...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATGGAATTGGGCCAGAAAGGGTTTGTGTTCCTaGTCCTGCTGGTGGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: LGCHPAVAEPQQQWNWARKGLCS*SCWWTK Trigger: CTTTGTCCACCAGCAGGAGCAGGAACACAAACCCTT...TCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATGGAATTGGGCCAGATTCACTGAAGCTTGGTaGTTGGAAAGGAGCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LGCHPAVAEPQQQWNWARFTEAW*LERSRV Trigger: CACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA...TCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATGGAATTGGGCCAGACAGATTGTCCAGTTCTaGGTCATCGCTGAAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LGCHPAVAEPQQQWNWARQIVQF*VIAEEG Trigger: CCCTTCTTCAGCGATGACCCAGAACTGGACAATCTG...TCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGGGGGGATTGCTTGGGTaGCCACCTGACCTTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TPRLFLDFLSSLSRREVRGGLLG*PPDLGR Trigger: CCTCCCAAGGTCAGGTGGTCACCCAAGCAATCCCCC...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT 56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGTTAACCTGTGTATTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGATGGCGATGTTGCCCTaGTGGAGTGCTGAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SRLTCVFWIWMAPWGIAWMAMLP*WSAEAG Trigger: CCCAGCCTCAGCACTCCAGCAGGGCAACATCGCCAT...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACACAGGTTAACCTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCTCCTCTAGCTCCTCCTCCTCCTCTTCCTCCTCCTCCATATCATCTTCAAGGGTGAGGTTTGTCTaGGCGGCAATCTGCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ASSSSSSSSSSSSSISSSRVRFV*AAICLF Trigger: GAAGAGGCAGATTGCCGCGCAGACAAACCTCACCCT...TGAAGATGATATGGAGGAGGAGGAAGAGGAGGAGGAGGAGCTAGAGGAGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR GCA 90 bp | GACACTCCTTTCCTGCTCGGTGACCAGCGCAATCTGGGCTGCCTGACTACTCCATCTGAGGACAGGGACTaGAGGTTGTCCAAGTTGATG | + |
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Preference number: 2 (lower is better) Translates to: DTPFLLGDQRNLGCLTTPSEDRD*RLSKLM Trigger: CATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGA...TGGAGTAGTCAGGCAGCCCAGATTGCGCTGGTCACCGAGCAGGAAAGGAGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR CCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGCCCTCCCACTCCTCTaGCCACTGGTTATGCATTTG | + |
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Preference number: 2 (lower is better) Translates to: RCLSSQAVWLAPAMECSVALPLL*PLVMHL Trigger: CAAATGCATAACCAGTGGCCAGAGGAGTGGGAGGGC...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTTTCACAGCCACAGGGTaGGAGGGGACAGGAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFFTATG*EGTGGA Trigger: TGCTCCTCCTGTCCCCTCCCACCCTGTGGCTGTGAA...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGCGATGTTGCCCTGCTaGAGTGCTGAGGCTGGGACC | + |
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Preference number: 2 (lower is better) Translates to: DSSFVLGLLILIVQEGGEAMLPC*SAEAGT Trigger: GGTCCCAGCCTCAGCACTCCAGCAGGGCAACATCGC...CTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAACCCCAGCAGCAATGGAATTGGGCCAGAATCTTTGGGTGGGCCGGTGCGGGTGCATGAGATGCTaGAAGAGCCAAGAACGCATT | + |
|
Preference number: 2 (lower is better) Translates to: CRTPAAMELGQNLWVGRCGCMRC*KSQERI Trigger: AATGCGTTCTTGGCTCTTCCAGCATCTCATGCACCC...GCACCGGCCCACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR CAA 90 bp | TATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCTGTTaGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTCTGAGGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YSVSPDLTLSFFSGC*AGPSNGVLCSLRVW Trigger: CCAGACCCTCAGACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR CAA 90 bp | CTGCTGTTGCAGAACCCCAGCAGCAATGGAATTGGGCCAGAATCTTaGGGTGGGCCGGTGCTGAGACTTGATTTTCTTGGCTTTGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLLQNPSSNGIGPES*GGPVLRLDFLGFGS Trigger: GCTCCCAAAGCCAAGAAAATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGCTCCTTTCTGTCCGTaGGTGTCTTTCAAGGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RCLSSQAVWLAPAMECSVAPFCP*VSFKGA Trigger: AGCTCCCTTGAAAGACACTCACGGACAGAAAGGAGC...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTAGTCCATGGCTGCTGTaGCAAGAGACAGGGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFSPWLL*QETGSW Trigger: CCAGGACCCTGTCTCTTGGCACAGCAGCCATGGACT...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAATGTGCAGCCATCATTaGCTGCTGCATGGCCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: RCLSSQAVWLAPAMECSVMCSHH*LLHGHG Trigger: ACCATGGCCATGCAGCAGGCAATGATGGCTGCACAT...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CCA 90 bp | GACACTCCTTTCCTGCTCGGTGACCAGCGCAATCTGGGCTGCCTGACTACTCCATTAACCTGTGTATTCTaGATCTGGATGGCTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DTPFLLGDQRNLGCLTTPLTCVF*IWMAPW Trigger: CCAGGGAGCCATCCAGATCCAGAATACACAGGTTAA...TGGAGTAGTCAGGCAGCCCAGATTGCGCTGGTCACCGAGCAGGAAAGGAGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR CAA 90 bp | CCTCTTCTTCCGTGCCATCCAATGAATCATCATGTGCAGCCATCATaGCCTGCTGCATGGCCATGGTGGCATTGTCTGAGGACAGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: PLLPCHPMNHHVQPS*PAAWPWWHCLRTGT Trigger: AGTCCCTGTCCTCAGACAATGCCACCATGGCCATGCAGCAGGCAATGATGGCTGCACATGATGATTCATTGGATGGCACGGAAGAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTACCACCTGACACGACTTaGGAATTGACGGTTGTCATG | + |
|
Preference number: 2 (lower is better) Translates to: RCLSSQAVWLAPAMECSVPPDTT*ELTVVM Trigger: CATGACAACCGTCAATTCTCAAGTCGTGTCAGGTGG...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTAGTCCATGGCTGCTGTaGCAAGAGACAGGGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RFSLKLGGWKGAGCLLCISPWLL*QETGSW Trigger: CCAGGACCCTGTCTCTTGGCACAGCAGCCATGGACT...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTACTTATAGTCCATGGCTaGTGTGCCAAGAGACAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: RCLSSQAVWLAPAMECSVLIVHG*CAKRQG Trigger: ACCCTGTCTCTTGGCACAGCAGCCATGGACTATAAG...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTCCAGGTTCTGCTACCTaGTTGGTCCTCGAGCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: MSVLKKGACHGAEWRNLCPGSAT*LVLELT Trigger: GGTCAGCTCGAGGACCAAGCAGGTAGCAGAACCTGG...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTCTGGTAGTGCCAGCTTaGGAGCAGAGGGATACCACG | + |
|
Preference number: 2 (lower is better) Translates to: RFSLKLGGWKGAGCLLCILVVPA*EQRDTT Trigger: CGTGGTATCCCTCTGCTCCCAAGCTGGCACTACCAG...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAACCTTCTTCAGACCCTaGCTTCCCATTGGGACAATG | + |
|
Preference number: 2 (lower is better) Translates to: RCLSSQAVWLAPAMECSVTFFRP*LPIGTM Trigger: CATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGT...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTCGCAAGAGTGCCCTCTaGTTGAGCCAGATAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCRKSAL*LSQIAI Trigger: AATGGCTATCTGGCTCAACCAGAGGGCACTCTTGCG...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTGCTGCATGGCCATGGTaGCATTGTCTGAGGACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIAAWPW*HCLRTG Trigger: CCCTGTCCTCAGACAATGCCACCATGGCCATGCAGC...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTGTCCACGTTCCACTCTaGTATGAAGGGTGTGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCVHVPL*YEGCGV Trigger: AACACCACACCCTTCATATCAGAGTGGAACGTGGAC...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGCTGCAGGAGGTCCTGTaGGTGAAGGTTTATGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TPRLFLDFLSSLSRREVRLQEVL*VKVYGG Trigger: CCCTCCATAAACCTTCACTCACAGGACCTCCTGCAG...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTGGGTGGGCCGGTGCTaGGACTTGATTTTCTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIWVGRC*DLIFLA Trigger: AGCCAAGAAAATCAAGTCTCAGCACCGGCCCACCCA...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTATTCCGTGCCATCCAATaGATCATCATGTGCAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: RCLSSQAVWLAPAMECSVFRAIQ*IIMCSH Trigger: ATGGCTGCACATGATGATTCATTGGATGGCACGGAA...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTCTTCCCTCCCAAGTCTaGCCCTTAGCAAAGGTTCGC | + |
|
Preference number: 2 (lower is better) Translates to: MSVLKKGACHGAEWRNLCLPSQV*PLAKVR Trigger: GCGAACCTTTGCTAAGGGGCAGACTTGGGAGGGAAG...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCTCAGGCTGTTTaGCTGGCCCCAGCAATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RFSLKLGGWKGAGCLLCISSQAV*LAPAME Trigger: CTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGA...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAATCTTCTCAGGCTGTTTaGCTGGCCCCAGCAATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQSSQAV*LAPAME Trigger: CTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGA...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCACTCCTCTGGCCACTaGTTATGCATTTGGGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFHSSGH*LCIWAP Trigger: AGGAGCCCAAATGCATAACCAGTGGCCAGAGGAGTG...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTGCCCTCCCACTCCTCTaGCCACTGGTTATGCATTTG | + |
|
Preference number: 2 (lower is better) Translates to: MSVLKKGACHGAEWRNLCALPLL*PLVMHL Trigger: CAAATGCATAACCAGTGGCCAGAGGAGTGGGAGGGC...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTAGCAGATGCCAAGCATaGTGTGTGTGGATCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFSRCQA*CVWISW Trigger: CCAGCTGATCCACACACACCATGCTTGGCATCTGCT...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGTTCACAGCCACAGGGTaGGAGGGGACAGGAGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KVSRQKACLSSRYGIKREFTATG*EGTGGA Trigger: TGCTCCTCCTGTCCCCTCCCACCCTGTGGCTGTGAA...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCGCAAGAGTGCCCTCTaGTTGAGCCAGATAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFRKSAL*LSQIAI Trigger: AATGGCTATCTGGCTCAACCAGAGGGCACTCTTGCG...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTTCCTGCTCCTGCTGGTaGACAAAGTTCTCGATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFSCSCW*TKFSMS Trigger: GGACATCGAGAACTTTGTCCACCAGCAGGAGCAGGA...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCATTTCTTCAAGCTATaGTTCGGGGAAGCTAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFHFFKL*FGEARA Trigger: GGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATG...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTGCTCCTTTCTGTCCGTaGGTGTCTTTCAAGGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: MSVLKKGACHGAEWRNLCAPFCP*VSFKGA Trigger: AGCTCCCTTGAAAGACACTCACGGACAGAAAGGAGC...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTCACCATGGTAACCGGCTaGTATAAGGCTCCACCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSFVLGLLILIVQEGGEVTMVTG*YKAPPD Trigger: GTCAGGTGGAGCCTTATATCAGCCGGTTACCATGGT...GACCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTCTGGCCACTGGTTATaGATTTGGGCTCCTTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCSGHWL*IWAPFC Trigger: ACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTGACAGGAGGAGCAGATaGCAAGCATGGTGTGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: FSLKLGGWKGAGCLLCISDRRSR*QAWCVW Trigger: CCACACACACCATGCTTGGCATCTGCTCCTCCTGTC...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCAGCGCCTGTCCACCTCACAGGGCAGTGGCTTGTAAACAAATCAAGTCTTTTCACTGAAGCTTGGTaGTTGGAAAGGAGCAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QAAPVHLTGQWLVNKSSLFTEAW*LERSRV Trigger: CACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA...AAGACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTGGACAGGCGCTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATCTCAGGCTGTTTGGCTaGCCCCAGCAATGGAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: AVACKQIKSFSMRSHGCHLRLFG*PQQWSA Trigger: AGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAG...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTCACTCCTCTGGCCACTaGTTATGCATTTGGGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: MSVLKKGACHGAEWRNLCHSSGH*LCIWAP Trigger: AGGAGCCCAAATGCATAACCAGTGGCCAGAGGAGTG...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTACCTTCTTCAGACCCTaGCTTCCCATTGGGACAATG | + |
|
Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFTFFRP*LPIGTM Trigger: CATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGT...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGGTTAACCTGTGTATTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGTGGATCCTCAGGACCTaGATTGCCTTCACCATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SRLTCVFWIWMAPWGIAWWILRT*IAFTIR Trigger: TCTGATGGTGAAGGCAATCCAGGTCCTGAGGATCCA...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACACAGGTTAACCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTCGTGAGTGAAGGTTTATaGAGGGCTGGTTGGGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: SSFVLGLLILIVQEGGEVVSEGL*RAGWGS Trigger: ACTCCCCCAACCAGCCCTCCATAAACCTTCACTCAC...GACCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAACATTTCTTCAAGCTATaGTTCGGGGAAGCTAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQHFFKL*FGEARA Trigger: GGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATG...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGCATTTCTTCAAGCTATaGTTCGGGGAAGCTAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: TPRLFLDFLSSLSRREVRHFFKL*FGEARA Trigger: GGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATG...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTGCTCCTTTCTGTCCGTaGGTGTCTTTCAAGGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: STFFRPWLPIGTMLLSNVAPFCP*VSFKGA Trigger: AGCTCCCTTGAAAGACACTCACGGACAGAAAGGAGC...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGGTTCTGGGTCATCGCTaGAGAAGGGTTTGTGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TPRLFLDFLSSLSRREVRVLGHR*RRVCVP Trigger: AGGAACACAAACCCTTCTTCAGCGATGACCCAGAAC...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTTAACCTGTGTATTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTACACGACTTGAGAATTaGCGGTTGTCATGGCGATGT | + |
|
Preference number: 2 (lower is better) Translates to: KVNLCILDLDGSLGDCLGTRLEN*RLSWRC Trigger: ACATCGCCATGACAACCGTCAATTCTCAAGTCGTGT...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACACAGGTTAACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTGCAGGGTGTCTCCTCTaGATTTCTTCAAGCTATGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSAGCLL*ISSSYD Trigger: ATCATAGCTTGAAGAAATGCAGAGGAGACACCCTGC...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTGGTTTCCTTCCCCCTCTCCTTATAGTCCATGGCTGCTGTGCCAAGAGACAGTCTGGCCACTGGTTATaGATTTGGGCTCCTTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: FGFLPPLLIVHGCCAKRQSGHWL*IWAPFC Trigger: ACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGA...CTGTCTCTTGGCACAGCAGCCATGGACTATAAGGAGAGGGGGAAGGAAACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTCTTATAGTCCATGGCTaGTGTGCCAAGAGACAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: RFSLKLGGWKGAGCLLCILIVHG*CAKRQG Trigger: ACCCTGTCTCTTGGCACAGCAGCCATGGACTATAAG...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTTGTGTTCCTGCTCCTaGTGGTGGACAAAGTTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: RFSLKLGGWKGAGCLLCILCSCS*WWTKFS Trigger: CGAGAACTTTGTCCACCAGCAGGAGCAGGAACACAA...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCGAAGACCTGTGGAGTaGAAAGAACCCCTAAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFRRPVE*KEPLKV Trigger: AACCTTTAGGGGTTCTTTCCACTCCACAGGTCTTCG...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTAGCAGATGCCAAGCATaGTGTGTGTGGATCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FSLKLGGWKGAGCLLCISSRCQA*CVWISW Trigger: CCAGCTGATCCACACACACCATGCTTGGCATCTGCT...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTCATTTCTTCAAGCTATaGTTCGGGGAAGCTAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: STFFRPWLPIGTMLLSNVHFFKL*FGEARA Trigger: GGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATG...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTGTCCACGTTCCACTCTaGTATGAAGGGTGTGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: STFFRPWLPIGTMLLSNVVHVPL*YEGCGV Trigger: AACACCACACCCTTCATATCAGAGTGGAACGTGGAC...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAAGGTTAACCTGTGTATTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGCAGGGTGTCTCCTCTaGATTTCTTCAAGCTATGAT | + |
|
Preference number: 2 (lower is better) Translates to: SRLTCVFWIWMAPWGIAWAGCLL*ISSSYD Trigger: ATCATAGCTTGAAGAAATGCAGAGGAGACACCCTGC...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACACAGGTTAACCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTGGCCACTGGTTATaGATTTGGGCTCCTTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RFSLKLGGWKGAGCLLCISGHWL*IWAPFC Trigger: ACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGA...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTGAAGGAGATGGCCAATaGACACTTACAAATGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCEGDGQ*TLTNEG Trigger: TCCTTCATTTGTAAGTGTGCATTGGCCATCTCCTTC...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTCATCTTCAGTGGGATAGGGGTGCATGAGATGCTGGAAGAGCCAAGAACGAGCAGGTTATCACTGTaGATCTTGGTTTTGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLIFSGIGVHEMLEEPRTSRLSL*ILVLRQ Trigger: CTGCCTCAAAACCAAGATGCACAGTGATAACCTGCT...CGTTCTTGGCTCTTCCAGCATCTCATGCACCCCTATCCCACTGAAGATGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATCGCAAGAGTGCCCTCTaGTTGAGCCAGATAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: AVACKQIKSFSMRSHGCHRKSAL*LSQIAI Trigger: AATGGCTATCTGGCTCAACCAGAGGGCACTCTTGCG...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGCTCCAGACATTGAATTaGGGGAATTCTGCAGGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TPRLFLDFLSSLSRREVRLQTLN*GNSAGG Trigger: ACCTCCTGCAGAATTCCCCCAATTCAATGTCTGGAG...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CCA 90 bp | GACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGTCCCCTGGGGGTTATTaGAGACTCCAGACATTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: DSSFVLGLLILIVQEGGESPGGY*RLQTLN Trigger: ATTCAATGTCTGGAGTCTCCAATAACCCCCAGGGGA...CTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTGGACTAGGTTTTCACTaGAGCTTGGTGGTTGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FSLKLGGWKGAGCLLCISGLGFH*SLVVGK Trigger: CTTTCCAACCACCAAGCTTCAGTGAAAACCTAGTCC...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCATCCTCTTCTTCCGTGCCATCCAATGAATCATCATGTGCAGCCATCATTGGGAGACTCCAGACATTaGATTGGGGGAATTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LHPLLPCHPMNHHVQPSLGDSRH*IGGILQ Trigger: CTGCAGAATTCCCCCAATTCAATGTCTGGAGTCTCC...CAATGATGGCTGCACATGATGATTCATTGGATGGCACGGAAGAAGAGGATGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAAGCAGGGTGTCTCCTCTaGATTTCTTCAAGCTATGAT | + |
|
Preference number: 2 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQAGCLL*ISSSYD Trigger: ATCATAGCTTGAAGAAATGCAGAGGAGACACCCTGC...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGCTTATAGTCCATGGCTaGTGTGCCAAGAGACAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQLIVHG*CAKRQG Trigger: ACCCTGTCTCTTGGCACAGCAGCCATGGACTATAAG...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATTTCACTGAAGCTTGGTaGTTGGAAAGGAGCAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: AVACKQIKSFSMRSHGCHFTEAW*LERSRV Trigger: CACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGTCACGTAGGGACTGCTaGGATCCCCAAAGTCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: KVSRQKACLSSRYGIKRESRRDC*DPQSHL Trigger: AAGATGACTTTGGGGATCCCAGCAGTCCCTACGTGA...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTACCCTGGCTTCCCATTaGGACAATGCTTCTTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: FSLKLGGWKGAGCLLCISTLASH*DNASFQ Trigger: TTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGT...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATTGTTCCTGCTCCTGCTaGTGGACAAAGTTCTCGATG | + |
|
Preference number: 2 (lower is better) Translates to: AVACKQIKSFSMRSHGCHCSCSC*WTKFSM Trigger: CATCGAGAACTTTGTCCACCAGCAGGAGCAGGAACA...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTACTATGGTCCTATTGTaGCAGGAGCTATGTGATCAC | + |
|
Preference number: 2 (lower is better) Translates to: STFFRPWLPIGTMLLSNVTMVLL*QELCDH Trigger: GTGATCACATAGCTCCTGTCACAATAGGACCATAGT...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATCCTTGCAGAGCTCATTaGCTTTCTCCAACTCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AVACKQIKSFSMRSHGCHPCRAH*LSPTLA Trigger: TGCTAGAGTTGGAGAAAGTCAATGAGCTCTGCAAGG...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTCACCTCACAGGGCAGTaGCTTGTAAACAAATCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: STFFRPWLPIGTMLLSNVHLTGQ*LVNKSS Trigger: ACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTG...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGAAGAAGGAGTCTCTTTaGTTTCCTTCCCCCTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQKKESL*FPSPSP Trigger: AGGAGAGGGGGAAGGAAACCAAAGAGACTCCTTCTT...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATAAGAAGGAGTCTCTTTaGTTTCCTTCCCCCTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: AVACKQIKSFSMRSHGCHKKESL*FPSPSP Trigger: AGGAGAGGGGGAAGGAAACCAAAGAGACTCCTTCTT...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGAAGAAGGAGTCTCTTTaGTTTCCTTCCCCCTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KVSRQKACLSSRYGIKREKKESL*FPSPSP Trigger: AGGAGAGGGGGAAGGAAACCAAAGAGACTCCTTCTT...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCATCCTCTTCTTCCGTGCCATCCAATGAATCATCATGTGCAGCCATCATTGTATTGGTGGCATGCTTaGGCAAGACTCCTCGTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LHPLLPCHPMNHHVQPSLYWWHA*ARLLVC Trigger: ACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATA...CAATGATGGCTGCACATGATGATTCATTGGATGGCACGGAAGAAGAGGATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTTTCCCATTGGGACAATaGTTCTTTCCAATGTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: EPWVSSLVFGESRSHAVFFPLGQ*FFPMFL Trigger: AAGAAACATTGGAAAGAAGCATTGTCCCAATGGGAA...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACTTCACTGAAGCTTGGTaGTTGGAAAGGAGCAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDFTEAW*LERSRV Trigger: CACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATCACCTCACAGGGCAGTaGCTTGTAAACAAATCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: AVACKQIKSFSMRSHGCHHLTGQ*LVNKSS Trigger: ACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTG...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACTCACGTAGGGACTGCTaGGATCCCCAAAGTCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDSRRDC*DPQSHL Trigger: AAGATGACTTTGGGGATCCCAGCAGTCCCTACGTGA...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATAACGCATTATATTGGTaGCATGCTTGGGCAAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: AVACKQIKSFSMRSHGCHNALYW*HAWARL Trigger: GAGTCTTGCCCAAGCATGCCACCAATATAATGCGTT...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGGAAGGAGATGGCCAATaGACACTTACAAATGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KVSRQKACLSSRYGIKREEGDGQ*TLTNEG Trigger: TCCTTCATTTGTAAGTGTGCATTGGCCATCTCCTTC...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTAAAGTCATCTTAATATaGCTCCTGATCCAGGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: STFFRPWLPIGTMLLSNVKVILI*LLIQVL Trigger: CAGAACCTGGATCAGGAGCCATATTAAGATGACTTT...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR GCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACGCAGGGTGTCTCCTCTaGATTTCTTCAAGCTATGAT | + |
|
Preference number: 2 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDAGCLL*ISSSYD Trigger: ATCATAGCTTGAAGAAATGCAGAGGAGACACCCTGC...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATAAAGTCATCTTAATATaGCTCCTGATCCAGGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: AVACKQIKSFSMRSHGCHKVILI*LLIQVL Trigger: CAGAACCTGGATCAGGAGCCATATTAAGATGACTTT...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CCA 72 bp | GGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATaGAATTGGGCCAGAATCTTTGGGTGGGCCGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GCHPAVAEPQQQ*NWARIFGWAGA Trigger: AGCACCGGCCCACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR TCA 72 bp | GACGGTTGTCATGGCGATGTTGCCCTGCTGGAGTGCTaGGGCTGGGACCACAATCCCCTGGGGGTTATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DGCHGDVALLEC*GWDHNPLGVIG Trigger: TCCAATAACCCCCAGGGGATTGTGGTCCCAGCCTCAGCACTCCAGCAGGGCAACATCGCCATGACAACCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR GCA 72 bp | CCATCAGGGTTCGTCCCTGGGGTGCCACCCTGCTGTTaGAGAACCCCAGCAGCAATGGAATTGGGCCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PSGFVPGVPPCC*RTPAAMELGQN Trigger: ATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR CCA 72 bp | CACGTGTGGTCAGTCCTGTCTTTCACAGCCACAGGGTaGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: HVWSVLSFTATG*EGTGGADAKHG Trigger: ACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCACCCTGTGGCTGTGAAAGACAGGACTGACCACACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CCA 72 bp | GTTGTCCAAGTTGATGGAACCATCAGGGTTCGTCCCTaGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VVQVDGTIRVRP*GATLLLQNPSS Trigger: GCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGGTTCCATCAACTTGGACAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGGACCCTGGCTTCCCATaGGGACAATGCTTCTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VGGDRRSRCQAWCVWISWDPGFP*GQCFFP Trigger: TGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTC...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCATCAGGGTTCGTCCCTGGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGATATTGGTGGCATGCTaGGGCAAGACTCCTCGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: NHQGSSLGCHPAVAEPQQILVAC*GKTPRL Trigger: CAAACGAGGAGTCTTGCCCAAGCATGCCACCAATAT...CTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR CCA 72 bp | CACCCTGCTGTTGCAGAACCCCAGCAGCAATGGAATTaGGCCAGAATCTTTGGGTGGGCCGGTGCTGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: HPAVAEPQQQWN*ARIFGWAGAET Trigger: AGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCACTGAAGCTTGGTGGTaGGAAAGGAGCAGGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSTEAWW*ERSRVS Trigger: AGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGT...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTTCGTCCCTGGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATGGACGGTTGCAAAAGTCCTaGCAGAGCTCATTGACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RVRPWGATLLLQNPSSNGRLQKS*QSSLTF Trigger: GAAAGTCAATGAGCTCTGCAAGGACTTTTGCAACCG...TCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | AACCATCAGGGTTCGTCCCTGGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAAGAACGCATTATATaGGTGGCATGCTTGGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: NHQGSSLGCHPAVAEPQQQERII*VACLGK Trigger: CTTGCCCAAGCATGCCACCAATATAATGCGTTCTTG...CTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCTGATGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR TCA 72 bp | CATTGTCTGAGGACAGGGACTGCAGGTTGTCCAAGTTaGTGGAACCATCAGGGTTCGTCCCTGGGGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HCLRTGTAGCPS*WNHQGSSLGCH Trigger: GTGGCACCCCAGGGACGAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCTTCTTCTCAGGCTGTTaGGCTGGCCCCAGCAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: VDQLGAISPAMLSPEGKSFFSGC*AGPSNG Trigger: TCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAA...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTTCGTCCCTGGGGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATGGAGCATTGATGAACCAGTaGTTTACTTGCAGAAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RVRPWGATLLLQNPSSNGALMNQ*FTCRRV Trigger: CACCCTTCTGCAAGTAAACAACTGGTTCATCAATGC...TCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACCCCAGGGACGAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR GCA 72 bp | TTAGACCCCTTCTTTCTCATCCTTCCCTCCCAAGTCTaGCCCTTAGCAAAGGTTCGCTCTGCAAGCAGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: LDPFFLILPSQV*PLAKVRSASSA Trigger: GGCGCTGCTTGCAGAGCGAACCTTTGCTAAGGGGCAGACTTGGGAGGGAAGGATGAGAAAGAAGGGGTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR GCA 72 bp | CTGTGTATTCTGGATCTGGATGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACCTTGGGAGGTTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCILDLDGSLGD*LGDHLTLGGYH Trigger: ATGGTAACCTCCCAAGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR CCA 72 bp | CTTGGGAGCAGAGGGATACCACGAAGACCTGTGGAGTaGAAAGAACCCCTAAAGGTTTATGGAGGGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGSRGIPRRPVE*KEPLKVYGGGW Trigger: CCAGCCCCCTCCATAAACCTTTAGGGGTTCTTTCCACTCCACAGGTCTTCGTGGTATCCCTCTGCTCCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CCA 72 bp | GAGGTGAGGTCAAGGTTAACCTGTGTATTCTGGATCTaGATGGCTCCCTGGGGGATTGCTTGGGTGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: EVRSRLTCVFWI*MAPWGIAWVTT Trigger: GGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACACAGGTTAACCTTGACCTCACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATGGAATTGGGCCAGAATCTACTCCAGACATTGAATaGGGGGAATTCTGCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GATLLLQNPSSNGIGPESTPDIE*GEFCRR Trigger: CCTCCTGCAGAATTCCCCCAATTCAATGTCTGGAGT...AGATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACTGTGTTCCAAGCCCAGGTCGCTGACATTCGTTGTCTGTAGCTCATCAGCCGGTGACCACCTGACCTaGGGAGGTTACCATGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLCSKPRSLTFVVCSSSAGDHLT*GGYHGN Trigger: GTTACCATGGTAACCTCCCAAGGTCAGGTGGTCACC...GGCTGATGAGCTACAGACAACGAATGTCAGCGACCTGGGCTTGGAACACAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTATGGCCATGGTGGCATaGTCTGAGGACAGGGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: EPWVSSLVFGESRSHAVFMAMVA*SEDRDC Trigger: GCAGTCCCTGTCCTCAGACAATGCCACCATGGCCAT...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR TCA 72 bp | CCATGCGGAGCCATGGGTGTCATCTCTGGTATTCGGTaGGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PCGAMGVISGIR*VQISRCLSSQA Trigger: AGCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTCCGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR GCA 72 bp | TGCATGGCCATGGTGGCATTGTCTGAGGACAGGGACTaGAGGTTGTCCAAGTTGATGGAACCATCAGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CMAMVALSEDRD*RLSKLMEPSGF Trigger: GAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAATGCCACCATGGCCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTTTCTTCTCAGGCTGTTaGGCTGGCCCCAGCAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: EPWVSSLVFGESRSHAVFFFSGC*AGPSNG Trigger: TCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAA...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCCACCCTGCTGTTGCAGAACCCCAGCAGCAATGGAATTGGGCCAGAATCTTGGAGACTCCAGACATaGAATTGGGGGAATTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GATLLLQNPSSNGIGPESWRLQT*NWGNSA Trigger: TGCAGAATTCCCCCAATTCAATGTCTGGAGTCTCCA...AGATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTGCAACAGCAGGGTGGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTATGCAGGTTGTCCAAGTaGATGGAACCATCAGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RCLSSQAVWLAPAMECSVCRLSK*MEPSGF Trigger: GAACCCTGATGGTTCCATCAACTTGGACAACCTGCA...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR TCA 72 bp | GCTGATATAAGGCTCCACCTGACACGACTTGAGAATTaGCGGTTGTCATGGCGATGTTGCCCTGCTGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ADIRLHLTRLEN*RLSWRCCPAGV Trigger: CACTCCAGCAGGGCAACATCGCCATGACAACCGTCAATTCTCAAGTCGTGTCAGGTGGAGCCTTATATCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR GCA 72 bp | TTTGGTTTCCTTCCCCCTCTCCTTATAGTCCATGGCTaGTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FGFLPPLLIVHG*CAKRQGPGRVS Trigger: ACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCAGCCATGGACTATAAGGAGAGGGGGAAGGAAACCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR GCA 72 bp | TCCAATGAATCATCATGTGCAGCCATCATTGCCTGCTaGATGGCCATGGTGGCATTGTCTGAGGACAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SNESSCAAIIAC*MAMVALSEDRD Trigger: GTCCCTGTCCTCAGACAATGCCACCATGGCCATGCAGCAGGCAATGATGGCTGCACATGATGATTCATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR GCA 72 bp | CCATCCAATGAATCATCATGTGCAGCCATCATTGCCTaGTGCATGGCCATGGTGGCATTGTCTGAGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSNESSCAAIIA*CMAMVALSEDR Trigger: CCTGTCCTCAGACAATGCCACCATGGCCATGCAGCAGGCAATGATGGCTGCACATGATGATTCATTGGATGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTTTCCTTCCCCCTCTCCTTATAGTCCATGGCTGCTGTGCCAAGAGACAGCCACTGGTTATGCATTaGGGCTCCTTTCTGTCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: FGFLPPLLIVHGCCAKRQPLVMH*GSFLSV Trigger: CACGGACAGAAAGGAGCCCAAATGCATAACCAGTGG...CTGTCTCTTGGCACAGCAGCCATGGACTATAAGGAGAGGGGGAAGGAAACCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTCGCTGAAGAAGGGTTaGTGTTCCTGCTCCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TPRLFLDFLSSLSRREVRSLKKG*CSCSCW Trigger: CCAGCAGGAGCAGGAACACAAACCCTTCTTCAGCGA...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTCATGTGCAGCCATCATaGCCTGCTGCATGGCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: FSLKLGGWKGAGCLLCISHVQPS*PAAWPW Trigger: CCATGGCCATGCAGCAGGCAATGATGGCTGCACATG...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACTGTGTTCCAAGCCCAGGTCGCTGACATTCGTTGTCTGTAGCTCATCAGCCTCCTTGCAGAGCTCATaGACTTTCTCCAACTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLCSKPRSLTFVVCSSSASLQSS*TFSNSS Trigger: GCTAGAGTTGGAGAAAGTCAATGAGCTCTGCAAGGA...GGCTGATGAGCTACAGACAACGAATGTCAGCGACCTGGGCTTGGAACACAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATATTGGGCCAGAATCTTaGGGTGGGCCGGTGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AVACKQIKSFSMRSHGCHIGPES*GGPVLR Trigger: TCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAAT...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTGACAGGGACTGCAGGTaGTCCAAGTTGATGGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIDRDCR*SKLMEP Trigger: TGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTC...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR TCA 72 bp | ATGGAATTGGGCCAGAATCTTTGGGTGGGCCGGTGCTaGGACTTGATTTTCTTGGCTTTGGGAGCAGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: MELGQNLWVGRC*DLIFLALGAGS Trigger: AGATCCTGCTCCCAAAGCCAAGAAAATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAATTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR GCA 72 bp | AAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTaGATTTCTTCAAGCTATGATTCGGGGAAGCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KLGGWKGAGCLL*ISSSYDSGKLG Trigger: CCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR GCA 72 bp | TTCAGTACTGGTTTGGTGGATACATCAGAAGGAGGTTaGGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FSTGLVDTSEGG*VTLGRWKGLGG Trigger: CCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGATGTATCCACCAAACCAGTACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR GCA 72 bp | AGTTCTGGGTCATCGCTGAAGAAGGGTTTGTGTTCCTaGTCCTGCTGGTGGACAAAGTTCTCGATGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SSGSSLKKGLCS*SCWWTKFSMST Trigger: TGTGGACATCGAGAACTTTGTCCACCAGCAGGAGCAGGAACACAAACCCTTCTTCAGCGATGACCCAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTCCACTGGTTATGCATTaGGGCTCCTTTCTGTCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: FSLKLGGWKGAGCLLCISPLVMH*GSFLSV Trigger: CACGGACAGAAAGGAGCCCAAATGCATAACCAGTGG...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTCTCCTCAGGACCTGGATaGCCTTCACCATCAGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSFVLGLLILIVQEGGEVSSGPG*PSPSDC Trigger: ACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGGA...GACCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR GCA 72 bp | GAGGGAGATGTAGACATGTGTATCCATGTGCACGTATaGACACATGTCCGTGCTGAAGAAGGGAGCTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: EGDVDMCIHVHV*THVRAEEGSLS Trigger: TGACAAGCTCCCTTCTTCAGCACGGACATGTGTGCATACGTGCACATGGATACACATGTCTACATCTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CCA 72 bp | AAGTCTTTTTCCATGCGGAGCCATGGGTGTCATCTCTaGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KSFSMRSHGCHL*YSVSPDLTLSF Trigger: GAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTCCGCATGGAAAAAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGACTGAAGCTTGGTGGTaGGAAAGGAGCAGGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQTEAWW*ERSRVS Trigger: AGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGT...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTTCTTCTCAGGCTGTTaGGCTGGCCCCAGCAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: VSEELHLRVGTSNKTLWSFFSGC*AGPSNG Trigger: TCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAA...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGCCACTGGTTATGCATTaGGGCTCCTTTCTGTCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: KVSRQKACLSSRYGIKREPLVMH*GSFLSV Trigger: CACGGACAGAAAGGAGCCCAAATGCATAACCAGTGG...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGGAAGAAGGAGTCTCTTaGGTTTCCTTCCCCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQEEGVS*VSFPLS Trigger: GGAGAGGGGGAAGGAAACCAAAGAGACTCCTTCTTC...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGGACCCTGGCTTCCCATaGGGACAATGCTTCTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQDPGFP*GQCFFP Trigger: TGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTC...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTTGATTTTCTTGGCTTaGGGAGCAGGATCTGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RFSLKLGGWKGAGCLLCILIFLA*GAGSGL Trigger: CAACCCAGATCCTGCTCCCAAAGCCAAGAAAATCAA...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR TCA 72 bp | TTCCAATGTTTCTTCTGCCTTCTCTGGAGAATAGAATaGAGGAGGAGGCCAGAAGCTGGTAGTGCCAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FQCFFCLLWRIE*RRRPEAGSASL Trigger: CAAGCTGGCACTACCAGCTTCTGGCCTCCTCCTTCATTCTATTCTCCAGAGAAGGCAGAAGAAACATTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CCA 72 bp | CCTGAAGGTAAGAGCAGTAGCACCTTCTTCAGACCCTaGCTTCCCATTGGGACAATGCTTCTTTCCAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: PEGKSSSTFFRP*LPIGTMLLSNV Trigger: AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCTACTGCTCTTACCTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTGACCCAGATGTAGAGTaGCTCTTAACCTCTTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: STFFRPWLPIGTMLLSNVDPDVE*LLTSSG Trigger: ACCTGAAGAGGTTAAGAGCAACTCTACATCTGGGTC...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCATCCTCTTCTTCCGTGCCATCCAATGAATCATCATGTGCAGCCATCATTGATCCCCTGGGGGTTATaGGAGACTCCAGACATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LHPLLPCHPMNHHVQPSLIPWGL*ETPDIE Trigger: TTCAATGTCTGGAGTCTCCAATAACCCCCAGGGGAT...CAATGATGGCTGCACATGATGATTCATTGGATGGCACGGAAGAAGAGGATGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTGGCAAGACTCCTCGTTaGTTCTTGGACTTCTTATCC | + |
|
Preference number: 3 (lower is better) Translates to: FSLKLGGWKGAGCLLCISGKTPR*FLDFLS Trigger: GGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCC...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR-3UTR CAA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACGAAGAAGGAGTCTCTTaGGTTTCCTTCCCCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDEEGVS*VSFPLS Trigger: GGAGAGGGGGAAGGAAACCAAAGAGACTCCTTCTTC...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTCTTAACCTCTTCAGGTaGGACCCACCTACAATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FSLKLGGWKGAGCLLCISLNLFR*DPPTMY Trigger: ATACATTGTAGGTGGGTCCAACCTGAAGAGGTTAAG...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR TCA 72 bp | ATAAGACACTATGGTCCTATTGTGACAGGAGCTATGTaGTCACGTAGGGACTGCTGGGATCCCCAAAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IRHYGPIVTGAM*SRRDCWDPQSH Trigger: ATGACTTTGGGGATCCCAGCAGTCCCTACGTGATCACATAGCTCCTGTCACAATAGGACCATAGTGTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR TCA 72 bp | CATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTaGGTGGAGGAATTTATGTGTGGATGTATGTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: HVRAEEGSLSRC*VEEFMCGCMYF Trigger: AAAGTACATACATCCACACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CCA 72 bp | TCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTaGAGGAATTTATGTGTGGATGTATGTACTTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: SVLKKGACHGAE*RNLCVDVCTLT Trigger: TGTTAAAGTACATACATCCACACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACCTTAACCTCTTCAGGTaGGACCCACCTACAATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDLNLFR*DPPTMY Trigger: ATACATTGTAGGTGGGTCCAACCTGAAGAGGTTAAG...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGCAAAGCTGGCGGAGGTaGTGCACTCGGAGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGDRRSRCQAWCVWISWQSWRR*CTRSPG Trigger: CCCAGGGCTCCGAGTGCATCACCTCCGCCAGCTTTG...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGGGGCTTGGGGATCAATaGGGGCACTGGGCACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGDRRSRCQAWCVWISWGLGDQ*GHWAQV Trigger: CACCTGTGCCCAGTGCCCCCATTGATCCCCAAGCCC...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGGCATCAAGCATGGGCTaGAGGATGCGCCTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGGDRRSRCQAWCVWISWASSMG*RMRLLA Trigger: TGCCAGGAGGCGCATCCTGCAGCCCATGCTTGATGC...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGGCTGTCCTGGTAGGGTaGGGGAGGGACATTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VGGDRRSRCQAWCVWISWAVLVG*GRDILR Trigger: ACGCAGAATGTCCCTCCCCCACCCTACCAGGACAGC...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCGCCTCCAGCTGGGCTTaGGGATCAATGGGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSASSWA*GSMGAL Trigger: CAGTGCCCCCATTGATCCCCAAGCCCAGCTGGAGGC...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCGCCCTGCTGGAGTGCTaGGGCTGGGACCACAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VDQLGAISPAMLSPEGKSALLEC*GWDHNP Trigger: GGGATTGTGGTCCCAGCCTCAGCACTCCAGCAGGGC...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGGCTGCATGGCCATGGTaGCATTGTCTGAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGDRRSRCQAWCVWISWAAWPW*HCLRTG Trigger: CCCTGTCCTCAGACAATGCCACCATGGCCATGCAGC...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VDQLGAISPAMLSPEGKSGSLGD*LGDHLT Trigger: GGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCC...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CCCACTCCTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PTPLATGYAFGLLSVRECGSLGD*LGDHLT Trigger: GGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCC...ACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAGGAGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCCTGCAGGAGGTCCTGTaGGTGAAGGTTTATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSLQEVL*VKVYGG Trigger: CCCTCCATAAACCTTCACTCACAGGACCTCCTGCAG...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGGCAGGTTGTCCAAGTTaGTGGAACCATCAGGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VGGDRRSRCQAWCVWISWAGCPS*WNHQGS Trigger: CGAACCCTGATGGTTCCATCAACTTGGACAACCTGC...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSGSLGD*LGDHLT Trigger: GGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCC...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCAGGGTGAGGTTTGTCTaGGCGGCAATCTGCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSRVRFV*AAICLF Trigger: GAAGAGGCAGATTGCCGCGCAGACAAACCTCACCCT...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCGCATCAAGCATGGGCTaGAGGATGCGCCTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDQLGAISPAMLSPEGKSASSMG*RMRLLA Trigger: TGCCAGGAGGCGCATCCTGCAGCCCATGCTTGATGC...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGCTTGGGTGACCACCTaGCCTTGGGAGGTTACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RCLSSQAVWLAPAMECSVAWVTT*PWEVTM Trigger: CATGGTAACCTCCCAAGGTCAGGTGGTCACCCAAGC...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGCGCCTGTCCACCTCACAGGGCAGTGGCTTGTAAACAAATCAAGTCTTGGGGGATTGCTTGGGTaGCCACCTGACCTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAAPVHLTGQWLVNKSSLGGLLG*PPDLGR Trigger: CCTCCCAAGGTCAGGTGGTCACCCAAGCAATCCCCC...AAGACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTGGACAGGCGCTGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCATGTGCAGCCATCATTaGCTGCTGCATGGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSMCSHH*LLHGHG Trigger: ACCATGGCCATGCAGCAGGCAATGATGGCTGCACAT...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTGCTGTCCTGGTAGGGTaGGGGAGGGACATTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCAVLVG*GRDILR Trigger: ACGCAGAATGTCCCTCCCCCACCCTACCAGGACAGC...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGCGCCTGTCCACCTCACAGGGCAGTGGCTTGTAAACAAATCAAGTCTTGGGCTTGGGGATCAATaGGGGCACTGGGCACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAAPVHLTGQWLVNKSSLGLGDQ*GHWAQV Trigger: CACCTGTGCCCAGTGCCCCCATTGATCCCCAAGCCC...AAGACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTGGACAGGCGCTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CAA 72 bp | GCATTGTCTGAGGACAGGGACTGCAGGTTGTCCAAGTaGATGGAACCATCAGGGTTCGTCCCTGGGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSEDRDCRLSK*MEPSGFVPGVP Trigger: TGGCACCCCAGGGACGAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| CDS-3UTR TCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTCAAAGCTGGCGGAGGTaGTGCACTCGGAGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: STFFRPWLPIGTMLLSNVQSWRR*CTRSPG Trigger: CCCAGGGCTCCGAGTGCATCACCTCCGCCAGCTTTG...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCGTTCTGGGTCATCGCTaGAGAAGGGTTTGTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSVLGHR*RRVCVP Trigger: AGGAACACAAACCCTTCTTCAGCGATGACCCAGAAC...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCGGGGGATTGCTTGGGTaGCCACCTGACCTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTEAWWLERSRVSPLHFFGGLLG*PPDLGR Trigger: CCTCCCAAGGTCAGGTGGTCACCCAAGCAATCCCCC...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCTGGGTGGGCCGGTGCTaGGACTTGATTTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VDQLGAISPAMLSPEGKSWVGRC*DLIFLA Trigger: AGCCAAGAAAATCAAGTCTCAGCACCGGCCCACCCA...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | CCCACTCCTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCCAAGCCCAGGTCGCTaGCATTCGTTGTCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPLATGYAFGLLSVRECPSPGR*HSLSVA Trigger: AGCTACAGACAACGAATGTCAGCGACCTGGGCTTGG...ACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAGGAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCCCTCAGGACCTGGATTaGCTTCACCATCAGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSPQDLD*LHHQIV Trigger: GACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGG...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGTTTCCTTCCCCCTCTCCTTATAGTCCATGGCTGCTGTGCCAAGAGACAGATGGCGATGTTGCCCTaGTGGAGTGCTGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGFLPPLLIVHGCCAKRQMAMLP*WSAEAG Trigger: CCCAGCCTCAGCACTCCAGCAGGGCAACATCGCCAT...CTGTCTCTTGGCACAGCAGCCATGGACTATAAGGAGAGGGGGAAGGAAACCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCGCCATCATTGCCTGCTaGATGGCCATGGTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VDQLGAISPAMLSPEGKSAIIAC*MAMVAL Trigger: CAATGCCACCATGGCCATGCAGCAGGCAATGATGGC...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTGGGCTTGGGGATCAATaGGGGCACTGGGCACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIGLGDQ*GHWAQV Trigger: CACCTGTGCCCAGTGCCCCCATTGATCCCCAAGCCC...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTGCGATGTTGCCCTGCTaGAGTGCTGAGGCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIAMLPC*SAEAGT Trigger: GGTCCCAGCCTCAGCACTCCAGCAGGGCAACATCGC...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTATCTGGATGGCTCCCTaGGGGATTGCTTGGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSIWMAP*GIAWVT Trigger: GGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGAT...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTGCTGCATGGCCATGGTaGCATTGTCTGAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSAAWPW*HCLRTG Trigger: CCCTGTCCTCAGACAATGCCACCATGGCCATGCAGC...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CAA 72 bp | TGTATTCTGGATCTGGATGGCTCCCTGGGGGATTGCTaGGGTGACCACCTGACCTTGGGAGGTTACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CILDLDGSLGDC*GDHLTLGGYHG Trigger: ACCATGGTAACCTCCCAAGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR CAA 72 bp | GCCATGGTGGCATTGTCTGAGGACAGGGACTGCAGGTaGTCCAAGTTGATGGAACCATCAGGGTTCGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AMVALSEDRDCR*SKLMEPSGFVP Trigger: AGGGACGAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAATGCCACCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGCAAAGCTGGCGGAGGTaGTGCACTCGGAGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKREQSWRR*CTRSPG Trigger: CCCAGGGCTCCGAGTGCATCACCTCCGCCAGCTTTG...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGGCCCTGCTGGAGTGCTaGGGCTGGGACCACAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKREALLEC*GWDHNP Trigger: GGGATTGTGGTCCCAGCCTCAGCACTCCAGCAGGGC...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTGGGATAGGGGTGCATaGGATGCTGGAAGAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCWDRGA*DAGRAK Trigger: CTTGGCTCTTCCAGCATCTCATGCACCCCTATCCCA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTTGGGATAGGGGTGCATaGGATGCTGGAAGAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSWDRGA*DAGRAK Trigger: CTTGGCTCTTCCAGCATCTCATGCACCCCTATCCCA...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTGGGTGGGCCGGTGCTaGGACTTGATTTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCWVGRC*DLIFLA Trigger: AGCCAAGAAAATCAAGTCTCAGCACCGGCCCACCCA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAAAGGTGGCTGGGCAGTTaGTGTCATCTGGGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQRWLGS*CHLGAV Trigger: GACAGCCCCCAGATGACAGCAACTGCCCAGCCACCT...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTAGCGGGAAAAGAGGGTaGCTGGGGGCTGTCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RFSLKLGGWKGAGCLLCISGKRG*LGAVLV Trigger: TACCAGGACAGCCCCCAGGCACCCTCTTTTCCCGCT...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTGTCAGAGCTGGGGCTaGGGAGGCATGTTGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCCQSWG*GGMLHH Trigger: ATGATGCAACATGCCTCCCCAGCCCCAGCTCTGACA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTTTCCTTCCCCCTCTCCTTATAGTCCATGGCTGCTGTGCCAAGAGACAGGCCTTGGAAGGTGGCTaGGCAGTTGCTGTCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGFLPPLLIVHGCCAKRQALEGG*AVAVIW Trigger: CCAGATGACAGCAACTGCCCAGCCACCTTCCAAGGC...CTGTCTCTTGGCACAGCAGCCATGGACTATAAGGAGAGGGGGAAGGAAACCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTGGGACCACAATCCCCTaGGGGTTATTGGAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSGTTIP*GLLETP Trigger: TGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCC...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTGCTGGCATCAAGCATaGGCTGCAGGATGCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFSLKLGGWKGAGCLLCICWHQA*AAGCAS Trigger: GGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCA...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGCGCCTGTCCACCTCACAGGGCAGTGGCTTGTAAACAAATCAAGTCTTGCTGCATGGCCATGGTaGCATTGTCTGAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QAAPVHLTGQWLVNKSSLAAWPW*HCLRTG Trigger: CCCTGTCCTCAGACAATGCCACCATGGCCATGCAGC...AAGACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTGGACAGGCGCTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTCCTGCTGCATGGCCATaGTGGCATTGTCTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSPAAWP*WHCLRT Trigger: TGTCCTCAGACAATGCCACCATGGCCATGCAGCAGG...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CAA 72 bp | CAGAACCCCAGCAGCAATGGAATTGGGCCAGAATCTTaGGGTGGGCCGGTGCTGAGACTTGATTTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QNPSSNGIGPES*GGPVLRLDFLG Trigger: GCCAAGAAAATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| 3UTR CAA 72 bp | CCGTGCCATCCAATGAATCATCATGTGCAGCCATCATaGCCTGCTGCATGGCCATGGTGGCATTGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCHPMNHHVQPS*PAAWPWWHCLR Trigger: CCTCAGACAATGCCACCATGGCCATGCAGCAGGCAATGATGGCTGCACATGATGATTCATTGGATGGCACGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| CDS-3UTR TCA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCGGAGACTCCAGACATTaGATTGGGGGAATTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VDQLGAISPAMLSPEGKSGDSRH*IGGILQ Trigger: CTGCAGAATTCCCCCAATTCAATGTCTGGAGTCTCC...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTGGGGGATTGCTTGGGTaGCCACCTGACCTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSAGGLLG*PPDLGR Trigger: CCTCCCAAGGTCAGGTGGTCACCCAAGCAATCCCCC...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGGTTAACCTGTGTATTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGGGGGAGGGACATTCTaGGTGGCCATCATTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRLTCVFWIWMAPWGIAWGGGTF*VAIIVR Trigger: TCTGACAATGATGGCCACGCAGAATGTCCCTCCCCC...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACACAGGTTAACCTTGA 53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| CDS-3UTR GCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTATGGCGATGTTGCCCTaGTGGAGTGCTGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: STFFRPWLPIGTMLLSNVMAMLP*WSAEAG Trigger: CCCAGCCTCAGCACTCCAGCAGGGCAACATCGCCAT...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGAACCAGTTGTTTACTTaGAGAAGGGTGAGGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGGDRRSRCQAWCVWISWNQLFT*RRVRFV Trigger: GACAAACCTCACCCTTCTGCAAGTAAACAACTGGTT...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTATCTGAGGACAGGGACTaGAGGTTGTCCAAGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RCLSSQAVWLAPAMECSVSEDRD*RLSKLM Trigger: CATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGA...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTTAACCTGTGTATTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTTGTCAGAGCTGGGGCTaGGGAGGCATGTTGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KVNLCILDLDGSLGDCLGCQSWG*GGMLHH Trigger: ATGATGCAACATGCCTCCCCAGCCCCAGCTCTGACA...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAATACACAGGTTAACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTTCCTGCTCCTGCTGGTaGACAAAGTTCTCGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSSCSCW*TKFSMS Trigger: GGACATCGAGAACTTTGTCCACCAGCAGGAGCAGGA...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCCAGATTGTCCAGTTCTaGGTCATCGCTGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VDQLGAISPAMLSPEGKSQIVQF*VIAEEG Trigger: CCCTTCTTCAGCGATGACCCAGAACTGGACAATCTG...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTGGGACCACAATCCCCTaGGGGTTATTGGAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPWVSSLVFGESRSHAVFGTTIP*GLLETP Trigger: TGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCC...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTGCGATGTTGCCCTGCTaGAGTGCTGAGGCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSAAMLPC*SAEAGT Trigger: GGTCCCAGCCTCAGCACTCCAGCAGGGCAACATCGC...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGGCGATGTTGCCCTGCTaGAGTGCTGAGGCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQAMLPC*SAEAGT Trigger: GGTCCCAGCCTCAGCACTCCAGCAGGGCAACATCGC...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCATCTGGATGGCTCCCTaGGGGATTGCTTGGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: FTEAWWLERSRVSPLHFFIWMAP*GIAWVT Trigger: GGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGAT...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGGGTGCATGAGATGCTaGAAGAGCCAAGAACGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RCLSSQAVWLAPAMECSVGCMRC*KSQERI Trigger: AATGCGTTCTTGGCTCTTCCAGCATCTCATGCACCC...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCCCTTGCAGAGCTCATTaGCTTTCTCCAACTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDQLGAISPAMLSPEGKSPCRAH*LSPTLA Trigger: TGCTAGAGTTGGAGAAAGTCAATGAGCTCTGCAAGG...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCAGGAGGTCCTGTGAGTaGAGGTTTATGGAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTEAWWLERSRVSPLHFFRRSCE*RFMEGW Trigger: CCAGCCCTCCATAAACCTTCACTCACAGGACCTCCT...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTCCACCTGACACGACTTaGGAATTGACGGTTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCPPDTT*ELTVVM Trigger: CATGACAACCGTCAATTCTCAAGTCGTGTCAGGTGG...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTGCTTGGGTGACCACCTaGCCTTGGGAGGTTACCATG | + |
|
Preference number: 4 (lower is better) Translates to: STFFRPWLPIGTMLLSNVAWVTT*PWEVTM Trigger: CATGGTAACCTCCCAAGGTCAGGTGGTCACCCAAGC...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCTGGGATAGGGGTGCATaGGATGCTGGAAGAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTEAWWLERSRVSPLHFFWDRGA*DAGRAK Trigger: CTTGGCTCTTCCAGCATCTCATGCACCCCTATCCCA...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTTTACTTGCAGAAGGGTaGGGTTTGTCTGCGCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EPWVSSLVFGESRSHAVFLLAEG*GLSARQ Trigger: TTGCCGCGCAGACAAACCTCACCCTTCTGCAAGTAA...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGCGCCTGTCCACCTCACAGGGCAGTGGCTTGTAAACAAATCAAGTCTTGCCGGTGCTGAGACTTaGTTTTCTTGGCTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QAAPVHLTGQWLVNKSSLAGAET*FSWLWE Trigger: CTCCCAAAGCCAAGAAAATCAAGTCTCAGCACCGGC...AAGACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTGGACAGGCGCTGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAACCAAGCCCAGGTCGCTaGCATTCGTTGTCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQPSPGR*HSLSVA Trigger: AGCTACAGACAACGAATGTCAGCGACCTGGGCTTGG...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTTGTGTTCCTGCTCCTaGTGGTGGACAAAGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCLCSCS*WWTKFS Trigger: CGAGAACTTTGTCCACCAGCAGGAGCAGGAACACAA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTTTGTGTTCCTGCTCCTaGTGGTGGACAAAGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSLCSCS*WWTKFS Trigger: CGAGAACTTTGTCCACCAGCAGGAGCAGGAACACAA...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTCCTCAGGACCTGGATTaGCTTCACCATCAGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCPQDLD*LHHQIV Trigger: GACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGG...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTAGGGTGAGGTTTGTCTaGGCGGCAATCTGCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIRVRFV*AAICLF Trigger: GAAGAGGCAGATTGCCGCGCAGACAAACCTCACCCT...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGGCATCAAGCATGGGCTaGAGGATGCGCCTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQASSMG*RMRLLA Trigger: TGCCAGGAGGCGCATCCTGCAGCCCATGCTTGATGC...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTGAGCAGGATCTGGGTTaGTGGCATCAAGCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIEQDLG*WHQAWA Trigger: AGCCCATGCTTGATGCCAGCAACCCAGATCCTGCTC...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAAGCCATCATTGCCTGCTaGATGGCCATGGTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQAIIAC*MAMVAL Trigger: CAATGCCACCATGGCCATGCAGCAGGCAATGATGGC...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTGCCATCATTGCCTGCTaGATGGCCATGGTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIAIIAC*MAMVAL Trigger: CAATGCCACCATGGCCATGCAGCAGGCAATGATGGC...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CTTCATCCTCTTCTTCCGTGCCATCCAATGAATCATCATGTGCAGCCATCATTGGCTGTCCTGGTAGGGTaGGGGAGGGACATTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LHPLLPCHPMNHHVQPSLAVLVG*GRDILR Trigger: ACGCAGAATGTCCCTCCCCCACCCTACCAGGACAGC...CAATGATGGCTGCACATGATGATTCATTGGATGGCACGGAAGAAGAGGATGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCGCCTCCAGCTGGGCTTaGGGATCAATGGGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSASSWA*GSMGAL Trigger: CAGTGCCCCCATTGATCCCCAAGCCCAGCTGGAGGC...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTGTTCCTGCTCCTGCTaGTGGACAAAGTTCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCCSCSC*WTKFSM Trigger: CATCGAGAACTTTGTCCACCAGCAGGAGCAGGAACA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTGGATCCTCAGGACCTaGATTGCCTTCACCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCWILRT*IAFTIR Trigger: TCTGATGGTGAAGGCAATCCAGGTCCTGAGGATCCA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTGTGAGTGAAGGTTTATaGAGGGCTGGTTGGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EPWVSSLVFGESRSHAVFVSEGL*RAGWGS Trigger: ACTCCCCCAACCAGCCCTCCATAAACCTTCACTCAC...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTATCTGGATGGCTCCCTaGGGGATTGCTTGGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: FSLKLGGWKGAGCLLCISIWMAP*GIAWVT Trigger: GGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGAT...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGTGCTGGCATCAAGCATaGGCTGCAGGATGCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKRECWHQA*AAGCAS Trigger: GGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCA...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTTGCTGGCATCAAGCATaGGCTGCAGGATGCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSACWHQA*AAGCAS Trigger: GGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCA...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTTTGGGAGCAGGATCTaGGTTGCTGGCATCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCFGSRI*VAGIKH Trigger: ATGCTTGATGCCAGCAACCCAGATCCTGCTCCCAAA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCCCTGCTGCATGGCCATaGTGGCATTGTCTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FTEAWWLERSRVSPLHFFPAAWP*WHCLRT Trigger: TGTCCTCAGACAATGCCACCATGGCCATGCAGCAGG...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTCCTTGCAGAGCTCATTaGCTTTCTCCAACTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSPCRAH*LSPTLA Trigger: TGCTAGAGTTGGAGAAAGTCAATGAGCTCTGCAAGG...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCTTACTTGCAGAAGGGTaGGGTTTGTCTGCGCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGLLAEG*GLSARQ Trigger: TTGCCGCGCAGACAAACCTCACCCTTCTGCAAGTAA...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTGCCGGTGCTGAGACTTaGTTTTCTTGGCTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MSVLKKGACHGAEWRNLCAGAET*FSWLWE Trigger: CTCCCAAAGCCAAGAAAATCAAGTCTCAGCACCGGC...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCGCAGGTTGTCCAAGTTaGTGGAACCATCAGGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGAGCPS*WNHQGS Trigger: CGAACCCTGATGGTTCCATCAACTTGGACAACCTGC...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTGGGGGAGGGACATTCTaGGTGGCCATCATTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STFFRPWLPIGTMLLSNVGGGTF*VAIIVR Trigger: TCTGACAATGATGGCCACGCAGAATGTCCCTCCCCC...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCATGGCGATGTTGCCCTaGTGGAGTGCTGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSMAMLP*WSAEAG Trigger: CCCAGCCTCAGCACTCCAGCAGGGCAACATCGCCAT...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCATTATATTGGTGGCATaGTTGGGCAAGACTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VDQLGAISPAMLSPEGKSIILVA*LGKTPR Trigger: ACGAGGAGTCTTGCCCAAGCATGCCACCAATATAAT...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATGCAGCCATCATTGCCTaGTGCATGGCCATGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVACKQIKSFSMRSHGCHAAIIA*CMAMVA Trigger: TGCCACCATGGCCATGCAGCAGGCAATGATGGCTGC...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGGCAGCCATCATTGCCTaGTGCATGGCCATGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKREAAIIA*CMAMVA Trigger: TGCCACCATGGCCATGCAGCAGGCAATGATGGCTGC...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTGCAGCCATCATTGCCTaGTGCATGGCCATGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSAAAIIA*CMAMVA Trigger: TGCCACCATGGCCATGCAGCAGGCAATGATGGCTGC...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTATGTGCAGCCATCATTaGCTGCTGCATGGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSVLKKGACHGAEWRNLCMCSHH*LLHGHG Trigger: ACCATGGCCATGCAGCAGGCAATGATGGCTGCACAT...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTGTCAGAGCTGGGGCTaGGGAGGCATGTTGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSLKLGGWKGAGCLLCISCQSWG*GGMLHH Trigger: ATGATGCAACATGCCTCCCCAGCCCCAGCTCTGACA...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCGAGGGACATTCTGCGTaGCCATCATTGTCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGEGHSA*PSLSEL Trigger: CAGCTCTGACAATGATGGCCACGCAGAATGTCCCTC...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGGCCTTGGAAGGTGGCTaGGCAGTTGCTGTCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQALEGG*AVAVIW Trigger: CCAGATGACAGCAACTGCCCAGCCACCTTCCAAGGC...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACGCCTCCAGCTGGGCTTaGGGATCAATGGGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDASSWA*GSMGAL Trigger: CAGTGCCCCCATTGATCCCCAAGCCCAGCTGGAGGC...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATTTGTCAGCCTCCAGCTaGGCTTGGGGATCAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVACKQIKSFSMRSHGCHLSASS*AWGSMG Trigger: CCCCATTGATCCCCAAGCCCAGCTGGAGGCTGACAA...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCAGATTGTCCAGTTCTaGGTCATCGCTGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPWVSSLVFGESRSHAVFQIVQF*VIAEEG Trigger: CCCTTCTTCAGCGATGACCCAGAACTGGACAATCTG...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTTCCCCTGGGGGTTATTaGAGACTCCAGACATTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSSPGGY*RLQTLN Trigger: ATTCAATGTCTGGAGTCTCCAATAACCCCCAGGGGA...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTGGGACCACAATCCCCTaGGGGTTATTGGAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STFFRPWLPIGTMLLSNVGTTIP*GLLETP Trigger: TGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCC...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTGGGTGCATGAGATGCTaGAAGAGCCAAGAACGCATT | + |
|
Preference number: 4 (lower is better) Translates to: EPWVSSLVFGESRSHAVFGCMRC*KSQERI Trigger: AATGCGTTCTTGGCTCTTCCAGCATCTCATGCACCC...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGCGCCTGTCCACCTCACAGGGCAGTGGCTTGTAAACAAATCAAGTCTTTTTGGGAGCAGGATCTaGGTTGCTGGCATCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QAAPVHLTGQWLVNKSSLFGSRI*VAGIKH Trigger: ATGCTTGATGCCAGCAACCCAGATCCTGCTCCCAAA...AAGACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTGGACAGGCGCTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCGTTCTGGGTCATCGCTaGAGAAGGGTTTGTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGVLGHR*RRVCVP Trigger: AGGAACACAAACCCTTCTTCAGCGATGACCCAGAAC...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATAGGAGGTCCTGTGAGTaGAGGTTTATGGAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVACKQIKSFSMRSHGCHRRSCE*RFMEGW Trigger: CCAGCCCTCCATAAACCTTCACTCACAGGACCTCCT...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCGGAGACTCCAGACATTaGATTGGGGGAATTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTEAWWLERSRVSPLHFFGDSRH*IGGILQ Trigger: CTGCAGAATTCCCCCAATTCAATGTCTGGAGTCTCC...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTCCACCTGACACGACTTaGGAATTGACGGTTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: MSVLKKGACHGAEWRNLCPPDTT*ELTVVM Trigger: CATGACAACCGTCAATTCTCAAGTCGTGTCAGGTGG...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTACCATGGTAACCGGCTaGTATAAGGCTCCACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLKLGGWKGAGCLLCISTMVTG*YKAPPD Trigger: GTCAGGTGGAGCCTTATATCAGCCGGTTACCATGGT...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCGCTTGGGTGACCACCTaGCCTTGGGAGGTTACCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSAWVTT*PWEVTM Trigger: CATGGTAACCTCCCAAGGTCAGGTGGTCACCCAAGC...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGGGGGGAGGGACATTCTaGGTGGCCATCATTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQGGGTF*VAIIVR Trigger: TCTGACAATGATGGCCACGCAGAATGTCCCTCCCCC...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTAAGGGTTTGTGTTCCTaGTCCTGCTGGTGGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIKGLCS*SCWWTK Trigger: CTTTGTCCACCAGCAGGAGCAGGAACACAAACCCTT...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCAAGGGTTTGTGTTCCTaGTCCTGCTGGTGGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGKGLCS*SCWWTK Trigger: CTTTGTCCACCAGCAGGAGCAGGAACACAAACCCTT...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGGAGCAGGATCTGGGTTaGTGGCATCAAGCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKREEQDLG*WHQAWA Trigger: AGCCCATGCTTGATGCCAGCAACCCAGATCCTGCTC...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCTCTGAGGACAGGGACTaGAGGTTGTCCAAGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FTEAWWLERSRVSPLHFFSEDRD*RLSKLM Trigger: CATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGA...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATTGTCAGAGCTGGGGCTaGGGAGGCATGTTGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVACKQIKSFSMRSHGCHCQSWG*GGMLHH Trigger: ATGATGCAACATGCCTCCCCAGCCCCAGCTCTGACA...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCGCCTTGGAAGGTGGCTaGGCAGTTGCTGTCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSALEGG*AVAVIW Trigger: CCAGATGACAGCAACTGCCCAGCCACCTTCCAAGGC...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTTCCTGCTCCTGCTGGTaGACAAAGTTCTCGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STFFRPWLPIGTMLLSNVSCSCW*TKFSMS Trigger: GGACATCGAGAACTTTGTCCACCAGCAGGAGCAGGA...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAATGTTCCTGCTCCTGCTaGTGGACAAAGTTCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQCSCSC*WTKFSM Trigger: CATCGAGAACTTTGTCCACCAGCAGGAGCAGGAACA...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTTATTGGTGGCATGCTTaGGCAAGACTCCTCGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EPWVSSLVFGESRSHAVFYWWHA*ARLLVC Trigger: ACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATA...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAAGGGTGCATGAGATGCTaGAAGAGCCAAGAACGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQGCMRC*KSQERI Trigger: AATGCGTTCTTGGCTCTTCCAGCATCTCATGCACCC...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATCCTGCTGCATGGCCATaGTGGCATTGTCTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AVACKQIKSFSMRSHGCHPAAWP*WHCLRT Trigger: TGTCCTCAGACAATGCCACCATGGCCATGCAGCAGG...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CAA 72 bp | ATTCAGTACTGGTTTGGTGGATACATCAGAAGGAGGTaGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQYWFGGYIRRR*RNIRQVEGARR Trigger: CCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGATGTATCCACCAAACCAGTACTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCCTGCAGGAGGTCCTGTaGGTGAAGGTTTATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSLQEVL*VKVYGG Trigger: CCCTCCATAAACCTTCACTCACAGGACCTCCTGCAG...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTGGAGACTCCAGACATTaGATTGGGGGAATTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STFFRPWLPIGTMLLSNVGDSRH*IGGILQ Trigger: CTGCAGAATTCCCCCAATTCAATGTCTGGAGTCTCC...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGACCATGGTAACCGGCTaGTATAAGGCTCCACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQTMVTG*YKAPPD Trigger: GTCAGGTGGAGCCTTATATCAGCCGGTTACCATGGT...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATTTACTTGCAGAAGGGTaGGGTTTGTCTGCGCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AVACKQIKSFSMRSHGCHLLAEG*GLSARQ Trigger: TTGCCGCGCAGACAAACCTCACCCTTCTGCAAGTAA...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGGCCGGTGCTGAGACTTaGTTTTCTTGGCTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQAGAET*FSWLWE Trigger: CTCCCAAAGCCAAGAAAATCAAGTCTCAGCACCGGC...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTTCCGTGCCATCCAATaGATCATCATGTGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIFRAIQ*IIMCSH Trigger: ATGGCTGCACATGATGATTCATTGGATGGCACGGAA...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCCCAAGCCCAGGTCGCTaGCATTCGTTGTCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSPSPGR*HSLSVA Trigger: AGCTACAGACAACGAATGTCAGCGACCTGGGCTTGG...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTATTATATTGGTGGCATaGTTGGGCAAGACTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EPWVSSLVFGESRSHAVFIILVA*LGKTPR Trigger: ACGAGGAGTCTTGCCCAAGCATGCCACCAATATAAT...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACTTGTCAGCCTCCAGCTaGGCTTGGGGATCAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDLSASS*AWGSMG Trigger: CCCCATTGATCCCCAAGCCCAGCTGGAGGCTGACAA...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTGGATCCTCAGGACCTaGATTGCCTTCACCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLKLGGWKGAGCLLCISWILRT*IAFTIR Trigger: TCTGATGGTGAAGGCAATCCAGGTCCTGAGGATCCA...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGGTGAGTGAAGGTTTATaGAGGGCTGGTTGGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKREVSEGL*RAGWGS Trigger: ACTCCCCCAACCAGCCCTCCATAAACCTTCACTCAC...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTGTGAGTGAAGGTTTATaGAGGGCTGGTTGGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSAVSEGL*RAGWGS Trigger: ACTCCCCCAACCAGCCCTCCATAAACCTTCACTCAC...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAACTCCAGACATTGAATTaGGGGAATTCTGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQLQTLN*GNSAGG Trigger: ACCTCCTGCAGAATTCCCCCAATTCAATGTCTGGAG...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTCTCCAGACATTGAATTaGGGGAATTCTGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSVLKKGACHGAEWRNLCLQTLN*GNSAGG Trigger: ACCTCCTGCAGAATTCCCCCAATTCAATGTCTGGAG...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTTCCCCTGGGGGTTATTaGAGACTCCAGACATTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MSVLKKGACHGAEWRNLCSPGGY*RLQTLN Trigger: ATTCAATGTCTGGAGTCTCCAATAACCCCCAGGGGA...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCTTAACCTGTGTATTCTaGATCTGGATGGCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTEAWWLERSRVSPLHFFLTCVF*IWMAPW Trigger: CCAGGGAGCCATCCAGATCCAGAATACACAGGTTAA...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTACTCCTCGTTTGTTCTTaGACTTCTTATCCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCLSSQAVWLAPAMECSVLLVCS*TSYPHC Trigger: ACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAG...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTGAACCCCAGCAGCAATaGAATTGGGCCAGAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MSVLKKGACHGAEWRNLCEPQQQ*NWARIF Trigger: AAAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTC...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACCTGCAGGAGGTCCTGTaGGTGAAGGTTTATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDLQEVL*VKVYGG Trigger: CCCTCCATAAACCTTCACTCACAGGACCTCCTGCAG...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTACACGACTTGAGAATTaGCGGTTGTCATGGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: STFFRPWLPIGTMLLSNVTRLEN*RLSWRC Trigger: ACATCGCCATGACAACCGTCAATTCTCAAGTCGTGT...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTTCCGTGCCATCCAATaGATCATCATGTGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSLKLGGWKGAGCLLCISFRAIQ*IIMCSH Trigger: ATGGCTGCACATGATGATTCATTGGATGGCACGGAA...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACGGGGGAGGGACATTCTaGGTGGCCATCATTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDGGGTF*VAIIVR Trigger: TCTGACAATGATGGCCACGCAGAATGTCCCTCCCCC...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGTTGTGTTCCTGCTCCTaGTGGTGGACAAAGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKRELCSCS*WWTKFS Trigger: CGAGAACTTTGTCCACCAGCAGGAGCAGGAACACAA...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCAGCAGGTTATCACTGTaGATCTTGGTTTTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGSRLSL*ILVLRQ Trigger: CTGCCTCAAAACCAAGATGCACAGTGATAACCTGCT...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACAGGGTGAGGTTTGTCTaGGCGGCAATCTGCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDRVRFV*AAICLF Trigger: GAAGAGGCAGATTGCCGCGCAGACAAACCTCACCCT...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGCGCCTGTCCACCTCACAGGGCAGTGGCTTGTAAACAAATCAAGTCTTAACCAGTTGTTTACTTaGAGAAGGGTGAGGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAAPVHLTGQWLVNKSSLNQLFT*RRVRFV Trigger: GACAAACCTCACCCTTCTGCAAGTAAACAACTGGTT...AAGACTTGATTTGTTTACAAGCCACTGCCCTGTGAGGTGGACAGGCGCTGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTTGTTCCTGCTCCTGCTaGTGGACAAAGTTCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSACSCSC*WTKFSM Trigger: CATCGAGAACTTTGTCCACCAGCAGGAGCAGGAACA...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATTGGATCCTCAGGACCTaGATTGCCTTCACCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVACKQIKSFSMRSHGCHWILRT*IAFTIR Trigger: TCTGATGGTGAAGGCAATCCAGGTCCTGAGGATCCA...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTAAGAACGCATTATATTaGTGGCATGCTTGGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPWVSSLVFGESRSHAVFKNALY*WHAWAR Trigger: TCTTGCCCAAGCATGCCACCAATATAATGCGTTCTT...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGTTTGGGAGCAGGATCTaGGTTGCTGGCATCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKREFGSRI*VAGIKH Trigger: ATGCTTGATGCCAGCAACCCAGATCCTGCTCCCAAA...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTCCTTGCAGAGCTCATTaGCTTTCTCCAACTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSAPCRAH*LSPTLA Trigger: TGCTAGAGTTGGAGAAAGTCAATGAGCTCTGCAAGG...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATACACGACTTGAGAATTaGCGGTTGTCATGGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AVACKQIKSFSMRSHGCHTRLEN*RLSWRC Trigger: ACATCGCCATGACAACCGTCAATTCTCAAGTCGTGT...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACGCAGGTTGTCCAAGTTaGTGGAACCATCAGGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDAGCPS*WNHQGS Trigger: CGAACCCTGATGGTTCCATCAACTTGGACAACCTGC...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGCTTGTAAACAAATCAAGTCTTTTTCCATGCGGAGCCATGGGTGTCATTTCCGTGCCATCCAATaGATCATCATGTGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVACKQIKSFSMRSHGCHFRAIQ*IIMCSH Trigger: ATGGCTGCACATGATGATTCATTGGATGGCACGGAA...ATGACACCCATGGCTCCGCATGGAAAAAGACTTGATTTGTTTACAAGCCACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCAAGGGTTTGTGTTCCTaGTCCTGCTGGTGGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSKGLCS*SCWWTK Trigger: CTTTGTCCACCAGCAGGAGCAGGAACACAAACCCTT...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTAGCAGGTTATCACTGTaGATCTTGGTTTTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLKLGGWKGAGCLLCISSRLSL*ILVLRQ Trigger: CTGCCTCAAAACCAAGATGCACAGTGATAACCTGCT...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTCTGAGGACAGGGACTaGAGGTTGTCCAAGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSSEDRD*RLSKLM Trigger: CATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGA...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACATGTGCAGCCATCATTaGCTGCTGCATGGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDMCSHH*LLHGHG Trigger: ACCATGGCCATGCAGCAGGCAATGATGGCTGCACAT...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCCAGATTGTCCAGTTCTaGGTCATCGCTGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSQIVQF*VIAEEG Trigger: CCCTTCTTCAGCGATGACCCAGAACTGGACAATCTG...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGCTCCAGACATTGAATTaGGGGAATTCTGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKRELQTLN*GNSAGG Trigger: ACCTCCTGCAGAATTCCCCCAATTCAATGTCTGGAG...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTTTAACCTGTGTATTCTaGATCTGGATGGCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSALTCVF*IWMAPW Trigger: CCAGGGAGCCATCCAGATCCAGAATACACAGGTTAA...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGTTAACCTGTGTATTCTaGATCTGGATGGCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQLTCVF*IWMAPW Trigger: CCAGGGAGCCATCCAGATCCAGAATACACAGGTTAA...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGTATTGGTGGCATGCTTaGGCAAGACTCCTCGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKREYWWHA*ARLLVC Trigger: ACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATA...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTTATTGGTGGCATGCTTaGGCAAGACTCCTCGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSAYWWHA*ARLLVC Trigger: ACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATA...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTAAGAACGCATTATATTaGTGGCATGCTTGGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSVLKKGACHGAEWRNLCKNALY*WHAWAR Trigger: TCTTGCCCAAGCATGCCACCAATATAATGCGTTCTT...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR TCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACCCACCTGACACGACTTaGGAATTGACGGTTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDPPDTT*ELTVVM Trigger: CATGACAACCGTCAATTCTCAAGTCGTGTCAGGTGG...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACCCTCAGGACCTGGATTaGCTTCACCATCAGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDPQDLD*LHHQIV Trigger: GACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGG...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGAGCAGGTTATCACTGTaGATCTTGGTTTTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQSRLSL*ILVLRQ Trigger: CTGCCTCAAAACCAAGATGCACAGTGATAACCTGCT...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGATTATATTGGTGGCATaGTTGGGCAAGACTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQIILVA*LGKTPR Trigger: ACGAGGAGTCTTGCCCAAGCATGCCACCAATATAAT...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTCCCCTGGGGGTTATTaGAGACTCCAGACATTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSSPGGY*RLQTLN Trigger: ATTCAATGTCTGGAGTCTCCAATAACCCCCAGGGGA...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGAACGCATTATATTGGTaGCATGCTTGGGCAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQNALYW*HAWARL Trigger: GAGTCTTGCCCAAGCATGCCACCAATATAATGCGTT...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGAACGCATTATATTGGTaGCATGCTTGGGCAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: KVSRQKACLSSRYGIKRENALYW*HAWARL Trigger: GAGTCTTGCCCAAGCATGCCACCAATATAATGCGTT...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCGAACCCCAGCAGCAATaGAATTGGGCCAGAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSEELHLRVGTSNKTLWSEPQQQ*NWARIF Trigger: AAAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTC...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| 3UTR CAA 72 bp | ATTATATTGGTGGCATGCTTGGGCAAGACTCCTCGTTaGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IILVACLGKTPR*FLDFLSSLSRR Trigger: CCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175938.9 |
||
| CDS-3UTR CCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTAAGAACGCATTATATTaGTGGCATGCTTGGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSAKNALY*WHAWAR Trigger: TCTTGCCCAAGCATGCCACCAATATAATGCGTTCTT...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACGAACCCCAGCAGCAATaGAATTGGGCCAGAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDEPQQQ*NWARIF Trigger: AAAGATTCTGGCCCAATTCCATTGCTGCTGGGGTTC...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGCTCCTCGTTTGTTCTTaGACTTCTTATCCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQLLVCS*TSYPHC Trigger: ACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAG...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CCA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTCTCCTCGTTTGTTCTTaGACTTCTTATCCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: CISSSYDSGKLGPNFLSALLVCS*TSYPHC Trigger: ACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAG...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR GCA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACAACCAGTTGTTTACTTaGAGAAGGGTGAGGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDNQLFT*RRVRFV Trigger: GACAAACCTCACCCTTCTGCAAGTAAACAACTGGTT...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS CCA 90 bp | AGAGGGTGCCTGTACACAGCTCGCTTGTCAGCCTCCAGCTGGGCTTaGGGATCAATGGGGGCACTGGGCACAGGTGTGCTGGCGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGCLYTARLSASSWA*GSMGALGTGVLAVA Trigger: AGCTACCGCCAGCACACCTGTGCCCAGTGCCCCCATTGATCCCCAAGCCCAGCTGGAGGCTGACAAGCGAGCTGTGTACAGGCACCCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 ENSMUST00000177444.8 ENSMUST00000188057.7 ENSMUST00000188348.7 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGAGCCTCCAGCTGGGCTaGGGGATCAATGGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VGGDRRSRCQAWCVWISWSLQLG*GINGGT Trigger: AGTGCCCCCATTGATCCCCAAGCCCAGCTGGAGGCT...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCCTGTACACAGCTCGCTaGTCAGCCTCCAGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSLYTAR*SASSWA Trigger: AGCCCAGCTGGAGGCTGACAAGCGAGCTGTGTACAG...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGTCGCTGAAGAAGGGTTaGTGTTCCTGCTCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGGDRRSRCQAWCVWISWSLKKG*CSCSCW Trigger: CCAGCAGGAGCAGGAACACAAACCCTTCTTCAGCGA...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCGTTGTCATGGCGATGTaGCCCTGCTGGAGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSVVMAM*PCWSAE Trigger: CTCAGCACTCCAGCAGGGCAACATCGCCATGACAAC...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGGGTGACCACCTGACCTaGGGAGGTTACCATGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: VGGDRRSRCQAWCVWISWGDHLT*GGYHGN Trigger: GTTACCATGGTAACCTCCCAAGGTCAGGTGGTCACC...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCATGGCCATGGTGGCATaGTCTGAGGACAGGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSMAMVA*SEDRDC Trigger: GCAGTCCCTGTCCTCAGACAATGCCACCATGGCCAT...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTCTGCGTGGCCATCATaGTCAGAGCTGGGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCSAWPS*SELGLG Trigger: CCCCAGCCCCAGCTCTGACAATGATGGCCACGCAGA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTGCGTGGCCATCATaGTCAGAGCTGGGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RFSLKLGGWKGAGCLLCISAWPS*SELGLG Trigger: CCCCAGCCCCAGCTCTGACAATGATGGCCACGCAGA...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000175938.9 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGTGGAGACTCCAGACATaGAATTGGGGGAATTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VGGDRRSRCQAWCVWISWWRLQT*NWGNSA Trigger: TGCAGAATTCCCCCAATTCAATGTCTGGAGTCTCCA...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTTCCTTCCCCCTCTCCTTATAGTCCATGGCTGCTGTGCCAAGAGACAGTCCCTGGGGGATTGCTaGGGTGACCACCTGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGFLPPLLIVHGCCAKRQSLGDC*GDHLTL Trigger: CAAGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGA...CTGTCTCTTGGCACAGCAGCCATGGACTATAAGGAGAGGGGGAAGGAAACCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGGGGACAGGAGGAGCAGATGCCAAGCATGGTGTGTGTGGATCAGCTGGTTATCACTGTGCATCTaGGTTTTGAGGCAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VGGDRRSRCQAWCVWISWLSLCI*VLRQVM Trigger: CATCACCTGCCTCAAAACCAAGATGCACAGTGATAA...CCAGCTGATCCACACACACCATGCTTGGCATCTGCTCCTCCTGTCCCCTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCTCCCTGGGGGATTGCTaGGGTGACCACCTGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGSLGDC*GDHLTL Trigger: CAAGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGA...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCCAAGAACGCATTATATaGGTGGCATGCTTGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSQERII*VACLGK Trigger: CTTGCCCAAGCATGCCACCAATATAATGCGTTCTTG...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCTTGATTTTCTTGGCTTaGGGAGCAGGATCTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSLIFLA*GAGSGL Trigger: CAACCCAGATCCTGCTCCCAAAGCCAAGAAAATCAA...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGAGCCTCCAGCTGGGCTaGGGGATCAATGGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KVSRQKACLSSRYGIKRESLQLG*GINGGT Trigger: AGTGCCCCCATTGATCCCCAAGCCCAGCTGGAGGCT...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCACTCCAGACATTGAATaGGGGGAATTCTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VDQLGAISPAMLSPEGKSTPDIE*GEFCRR Trigger: CCTCCTGCAGAATTCCCCCAATTCAATGTCTGGAGT...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTGTTGTCATGGCGATGTaGCCCTGCTGGAGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: MSVLKKGACHGAEWRNLCVVMAM*PCWSAE Trigger: CTCAGCACTCCAGCAGGGCAACATCGCCATGACAAC...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTTCCTTCCCCCTCTCCTTATAGTCCATGGCTGCTGTGCCAAGAGACAGGGTGACCACCTGACCTaGGGAGGTTACCATGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FGFLPPLLIVHGCCAKRQGDHLT*GGYHGN Trigger: GTTACCATGGTAACCTCCCAAGGTCAGGTGGTCACC...CTGTCTCTTGGCACAGCAGCCATGGACTATAAGGAGAGGGGGAAGGAAACCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTTCCCTGGGGGATTGCTaGGGTGACCACCTGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: STFFRPWLPIGTMLLSNVSLGDC*GDHLTL Trigger: CAAGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGA...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGCCAAGAGACAGGGTCCTGGTAGGGTAAGTTGGAGCCCTGTGCAGTCCGCATTGATGAACCAGTaGTTTACTTGCAGAAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CCAKRQGPGRVSWSPVQSALMNQ*FTCRRV Trigger: CACCCTTCTGCAAGTAAACAACTGGTTCATCAATGC...GGACTGCACAGGGCTCCAACTTACCCTACCAGGACCCTGTCTCTTGGCACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTATTGGGCCAGAATCTTaGGGTGGGCCGGTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: MSVLKKGACHGAEWRNLCIGPES*GGPVLR Trigger: TCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAAT...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTATGGCCATGGTGGCATaGTCTGAGGACAGGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIMAMVA*SEDRDC Trigger: GCAGTCCCTGTCCTCAGACAATGCCACCATGGCCAT...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCCATGTGCAGCCATCATaGCCTGCTGCATGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGHVQPS*PAAWPW Trigger: CCATGGCCATGCAGCAGGCAATGATGGCTGCACATG...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTCATGTGCAGCCATCATaGCCTGCTGCATGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIHVQPS*PAAWPW Trigger: CCATGGCCATGCAGCAGGCAATGATGGCTGCACATG...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTCTGCGTGGCCATCATaGTCAGAGCTGGGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VSEELHLRVGTSNKTLWSSAWPS*SELGLG Trigger: CCCCAGCCCCAGCTCTGACAATGATGGCCACGCAGA...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTCTGTACACAGCTCGCTaGTCAGCCTCCAGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CISSSYDSGKLGPNFLSALYTAR*SASSWA Trigger: AGCCCAGCTGGAGGCTGACAAGCGAGCTGTGTACAG...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAATCGCTGAAGAAGGGTTaGTGTTCCTGCTCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQSLKKG*CSCSCW Trigger: CCAGCAGGAGCAGGAACACAAACCCTTCTTCAGCGA...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTATCCTTGCAGAGCTCATaGACTTTCTCCAACTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCLSSQAVWLAPAMECSVSLQSS*TFSNSS Trigger: GCTAGAGTTGGAGAAAGTCAATGAGCTCTGCAAGGA...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATCAGCTGGGCGCTATATCCCCTGCCATGTTGAGTCCTGAAGGTAAGAGCCGGTTGCAAAAGTCCTaGCAGAGCTCATTGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VDQLGAISPAMLSPEGKSRLQKS*QSSLTF Trigger: GAAAGTCAATGAGCTCTGCAAGGACTTTTGCAACCG...GCTCTTACCTTCAGGACTCAACATGGCAGGGGATATAGCGCCCAGCTGATCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAAGGTGACCACCTGACCTaGGGAGGTTACCATGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQGDHLT*GGYHGN Trigger: GTTACCATGGTAACCTCCCAAGGTCAGGTGGTCACC...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | CCCACTCCTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCAAGAACGCATTATATaGGTGGCATGCTTGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PTPLATGYAFGLLSVRECQERII*VACLGK Trigger: CTTGCCCAAGCATGCCACCAATATAATGCGTTCTTG...ACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAGGAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTTCCTTCCCCCTCTCCTTATAGTCCATGGCTGCTGTGCCAAGAGACAGCCAGCAGCAATGGAATaGGGCCAGAATCTTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FGFLPPLLIVHGCCAKRQPAAME*GQNLWV Trigger: CACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGG...CTGTCTCTTGGCACAGCAGCCATGGACTATAAGGAGAGGGGGAAGGAAACCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCCTGTACACAGCTCGCTaGTCAGCCTCCAGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSEELHLRVGTSNKTLWSLYTAR*SASSWA Trigger: AGCCCAGCTGGAGGCTGACAAGCGAGCTGTGTACAG...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTGGAGACTCCAGACATaGAATTGGGGGAATTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCWRLQT*NWGNSA Trigger: TGCAGAATTCCCCCAATTCAATGTCTGGAGTCTCCA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTATCCCCTGGGGGTTATaGGAGACTCCAGACATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EPWVSSLVFGESRSHAVFIPWGL*ETPDIE Trigger: TTCAATGTCTGGAGTCTCCAATAACCCCCAGGGGAT...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTGGCAAGACTCCTCGTTaGTTCTTGGACTTCTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSGKTPR*FLDFLS Trigger: GGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCC...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGTCAAGAACGCATTATATaGGTGGCATGCTTGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSFFSGCLAGPSNGVLCSQERII*VACLGK Trigger: CTTGCCCAAGCATGCCACCAATATAATGCGTTCTTG...ACTACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | CGCTGTCTTTCTTCTCAGGCTGTTTGGCTGGCCCCAGCAATGGAGTGCTCTGTAGCATTGATGAACCAGTaGTTTACTTGCAGAAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLSSQAVWLAPAMECSVALMNQ*FTCRRV Trigger: CACCCTTCTGCAAGTAAACAACTGGTTCATCAATGC...TACAGAGCACTCCATTGCTGGGGCCAGCCAAACAGCCTGAGAAGAAAGACAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCCGTGCTGAAGAAGGGAGCTTGTCACGGTGCTGAGTGGAGGAATTTATGTCCAGCAGCAATGGAATaGGGCCAGAATCTTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MSVLKKGACHGAEWRNLCPAAME*GQNLWV Trigger: CACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGG...ACATAAATTCCTCCACTCAGCACCGTGACAAGCTCCCTTCTTCAGCACGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTTCCTTCCCCCTCTCCTTATAGTCCATGGCTGCTGTGCCAAGAGACAGTGCAGGTTGTCCAAGTaGATGGAACCATCAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FGFLPPLLIVHGCCAKRQCRLSK*MEPSGF Trigger: GAACCCTGATGGTTCCATCAACTTGGACAACCTGCA...CTGTCTCTTGGCACAGCAGCCATGGACTATAAGGAGAGGGGGAAGGAAACCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCGACAGGGACTGCAGGTaGTCCAAGTTGATGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: FTEAWWLERSRVSPLHFFDRDCR*SKLMEP Trigger: TGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTC...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTCATGTGCAGCCATCATaGCCTGCTGCATGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CISSSYDSGKLGPNFLSAHVQPS*PAAWPW Trigger: CCATGGCCATGCAGCAGGCAATGATGGCTGCACATG...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCCTCAGGACCTGGATaGCCTTCACCATCAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: RFSLKLGGWKGAGCLLCISSGPG*PSPSDC Trigger: ACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGGA...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCTCCTCAGGACCTGGATaGCCTTCACCATCAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGSSGPG*PSPSDC Trigger: ACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGGA...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGGAGGTTGCGTAACATTAGGCAGGTGGAAGGGGCTAGGAGGGAGATGTTTATCACTGTGCATCTaGGTTTTGAGGCAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SEGGCVTLGRWKGLGGRCLSLCI*VLRQVM Trigger: CATCACCTGCCTCAAAACCAAGATGCACAGTGATAA...ACATCTCCCTCCTAGCCCCTTCCACCTGCCTAATGTTACGCAACCTCCTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTTGGAGACTCCAGACATaGAATTGGGGGAATTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EPWVSSLVFGESRSHAVFWRLQT*NWGNSA Trigger: TGCAGAATTCCCCCAATTCAATGTCTGGAGTCTCCA...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCATCCCCTGGGGGTTATaGGAGACTCCAGACATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGIPWGL*ETPDIE Trigger: TTCAATGTCTGGAGTCTCCAATAACCCCCAGGGGAT...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCGTTGTCATGGCGATGTaGCCCTGCTGGAGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSEELHLRVGTSNKTLWSVVMAM*PCWSAE Trigger: CTCAGCACTCCAGCAGGGCAACATCGCCATGACAAC...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTATATTGGTGGCATGCTaGGGCAAGACTCCTCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIILVAC*GKTPRL Trigger: CAAACGAGGAGTCTTGCCCAAGCATGCCACCAATAT...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | GAGCCATGGGTGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTTTGATTTTCTTGGCTTaGGGAGCAGGATCTGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: EPWVSSLVFGESRSHAVFLIFLA*GAGSGL Trigger: CAACCCAGATCCTGCTCCCAAAGCCAAGAAAATCAA...AAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACACCCATGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCATTGGGCCAGAATCTTaGGGTGGGCCGGTGCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: VSEELHLRVGTSNKTLWSIGPES*GGPVLR Trigger: TCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAAT...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | CTCTGGCCACTGGTTATGCATTTGGGCTCCTTTCTGTCCGTGAGTGTCTTTCAATGCAGGTTGTCCAAGTaGATGGAACCATCAGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LWPLVMHLGSFLSVSVFQCRLSK*MEPSGF Trigger: GAACCCTGATGGTTCCATCAACTTGGACAACCTGCA...TTGAAAGACACTCACGGACAGAAAGGAGCCCAAATGCATAACCAGTGGCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCATGGCCATGGTGGCATaGTCTGAGGACAGGGACTGC | + |
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Preference number: 5 (lower is better) Translates to: VSEELHLRVGTSNKTLWSMAMVA*SEDRDC Trigger: GCAGTCCCTGTCCTCAGACAATGCCACCATGGCCAT...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | TTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTTCTCCTTGCAGAGCTCATaGACTTTCTCCAACTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: FTEAWWLERSRVSPLHFFSLQSS*TFSNSS Trigger: GCTAGAGTTGGAGAAAGTCAATGAGCTCTGCAAGGA...GAAGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | AGCACCTTCTTCAGACCCTGGCTTCCCATTGGGACAATGCTTCTTTCCAATGTTACTCCAGACATTGAATaGGGGGAATTCTGCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: STFFRPWLPIGTMLLSNVTPDIE*GEFCRR Trigger: CCTCCTGCAGAATTCCCCCAATTCAATGTCTGGAGT...AACATTGGAAAGAAGCATTGTCCCAATGGGAAGCCAGGGTCTGAAGAAGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | AGGTTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTGGCAAGACTCCTCGTTaGTTCTTGGACTTCTTATCC | + |
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Preference number: 5 (lower is better) Translates to: RFSLKLGGWKGAGCLLCIGKTPR*FLDFLS Trigger: GGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCC...AATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | AAAGTCTCACGCCAAAAAGCTTGCCTTTCCTCTAGGTATGGCATCAAAAGGGAGCCAGCAGCAATGGAATaGGGCCAGAATCTTTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: KVSRQKACLSSRYGIKREPAAME*GQNLWV Trigger: CACCCAAAGATTCTGGCCCAATTCCATTGCTGCTGG...CTCCCTTTTGATGCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | TGCATTTCTTCAAGCTATGATTCGGGGAAGCTAGGGCCCAACTTTCTTAGTGCTGACAGGGACTGCAGGTaGTCCAAGTTGATGGAACCA | + |
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Preference number: 5 (lower is better) Translates to: CISSSYDSGKLGPNFLSADRDCR*SKLMEP Trigger: TGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTC...AGCACTAAGAAAGTTGGGCCCTAGCTTCCCCGAATCATAGCTTGAAGAAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACTCGCTGAAGAAGGGTTaGTGTTCCTGCTCCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDSLKKG*CSCSCW Trigger: CCAGCAGGAGCAGGAACACAAACCCTTCTTCAGCGA...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | TTTTCACTGAAGCTTGGTGGTTGGAAAGGAGCAGGGTGTCTCCTCTGCATTTCTCGGTTGCAAAAGTCCTaGCAGAGCTCATTGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: FSLKLGGWKGAGCLLCISRLQKS*QSSLTF Trigger: GAAAGTCAATGAGCTCTGCAAGGACTTTTGCAACCG...AGAAATGCAGAGGAGACACCCTGCTCCTTTCCAACCACCAAGCTTCAGTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | TGTCATCTCTGGTATTCGGTGAGTCCAGATCTCACGCTGTCTTTCTTCTCAGGCTTATCACTGTGCATCTaGGTTTTGAGGCAGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: CHLWYSVSPDLTLSFFSGLSLCI*VLRQVM Trigger: CATCACCTGCCTCAAAACCAAGATGCACAGTGATAA...GCCTGAGAAGAAAGACAGCGTGAGATCTGGACTCACCGAATACCAGAGATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | CATCACATTAAACCCAACGGAAAACACACGTGTGGTCAGTCCTGTCTTTCACAGATATTGGTGGCATGCTaGGGCAAGACTCCTCGTTTG | + |
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Preference number: 5 (lower is better) Translates to: HHIKPNGKHTCGQSCLSQILVAC*GKTPRL Trigger: CAAACGAGGAGTCTTGCCCAAGCATGCCACCAATAT...CTGTGAAAGACAGGACTGACCACACGTGTGTTTTCCGTTGGGTTTAATGTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCATATTGGTGGCATGCTaGGGCAAGACTCCTCGTTTG | + |
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Preference number: 5 (lower is better) Translates to: VSEELHLRVGTSNKTLWSILVAC*GKTPRL Trigger: CAAACGAGGAGTCTTGCCCAAGCATGCCACCAATAT...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | GTCTCTGAAGAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTCCTTGCAGAGCTCATaGACTTTCTCCAACTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: VSEELHLRVGTSNKTLWSSLQSS*TFSNSS Trigger: GCTAGAGTTGGAGAAAGTCAATGAGCTCTGCAAGGA...GGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTCTTCAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACACTCCAGACATTGAATaGGGGGAATTCTGCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDTPDIE*GEFCRR Trigger: CCTCCTGCAGAATTCCCCCAATTCAATGTCTGGAGT...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACATCCCCTGGGGGTTATaGGAGACTCCAGACATTGAA | + |
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Preference number: 5 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDIPWGL*ETPDIE Trigger: TTCAATGTCTGGAGTCTCCAATAACCCCCAGGGGAT...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS-3UTR CAA 90 bp | GAACTCCATCTGAGGGTAGGAACATCTAATAAGACACTATGGTCCTATTGTGACGGCAAGACTCCTCGTTaGTTCTTGGACTTCTTATCC | + |
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Preference number: 5 (lower is better) Translates to: ELHLRVGTSNKTLWSYCDGKTPR*FLDFLS Trigger: GGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCC...GTCACAATAGGACCATAGTGTCTTATTAGATGTTCCTACCCTCAGATGGAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 |
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| CDS CCA 72 bp | GGGTGCCTGTACACAGCTCGCTTGTCAGCCTCCAGCTaGGCTTGGGGATCAATGGGGGCACTGGGCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: GCLYTARLSASS*AWGSMGALGTG Trigger: ACCTGTGCCCAGTGCCCCCATTGATCCCCAAGCCCAGCTGGAGGCTGACAAGCGAGCTGTGTACAGGCACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 ENSMUST00000177444.8 ENSMUST00000188057.7 ENSMUST00000188348.7 |
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| CDS CAA 90 bp | AAGAGGGTGCCTGTACACAGCTCGCTTGTCAGCCTCCAGCTGGGCTaGGGGATCAATGGGGGCACTGGGCACAGGTGTGCTGGCGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: KRVPVHSSLVSLQLG*GINGGTGHRCAGGS Trigger: GCTACCGCCAGCACACCTGTGCCCAGTGCCCCCATTGATCCCCAAGCCCAGCTGGAGGCTGACAAGCGAGCTGTGTACAGGCACCCTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 ENSMUST00000177444.8 ENSMUST00000188057.7 ENSMUST00000188348.7 |
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| CDS CAA 72 bp | CCTGTACACAGCTCGCTTGTCAGCCTCCAGCTGGGCTaGGGGATCAATGGGGGCACTGGGCACAGGTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PVHSSLVSLQLG*GINGGTGHRCA Trigger: AGCACACCTGTGCCCAGTGCCCCCATTGATCCCCAAGCCCAGCTGGAGGCTGACAAGCGAGCTGTGTACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 ENSMUST00000177444.8 ENSMUST00000188057.7 ENSMUST00000188348.7 |
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| CDS CAA 72 bp | AGGAGCGGGAAAAGAGGGTGCCTGTACACAGCTCGCTaGTCAGCCTCCAGCTGGGCTTGGGGATCAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: RSGKRGCLYTAR*SASSWAWGSMG Trigger: CCCCATTGATCCCCAAGCCCAGCTGGAGGCTGACAAGCGAGCTGTGTACAGGCACCCTCTTTTCCCGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000039674.13 ENSMUST00000080754.12 ENSMUST00000177218.8 ENSMUST00000177444.8 ENSMUST00000188057.7 ENSMUST00000188348.7 |
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