Pregenerated sensors for PKN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026785Ensembl transcript IDs: ENSMUST00000045246.8, ENSMUST00000125346.8, ENSMUST00000150770.8
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGTCTGGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACAGGCACATGGTTACGTaGAGGCTTCCTGCAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: WSGVYREIEGQSYRHSRDRHMVT*RLPAVW Trigger: CCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCT...GTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCCAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGGCCACTGCCTGTTGGCGAGCAGTaGGGGAGCTCTGGGAGACTG | + |
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Preference number: 4 (lower is better) Translates to: TAGTRRKSLQRQPHGRPLPVGEQ*GSSGRL Trigger: CAGTCTCCCAGAGCTCCCTCACTGCTCGCCAACAGG...CAGTGGCCGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGGCCACTGAGAGGCGCGGGGGCTTaGGAGGAGGCTTCGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TAGTRRKSLQRQPHGRPLRGAGA*EEASCL Trigger: AAGACACGAAGCCTCCTCCCAAGCCCCCGCGCCTCT...CAGTGGCCGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGGCCACTGCGGAAGGCAGCCTGTTaGCGAGCAGTGAGGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TAGTRRKSLQRQPHGRPLRKAAC*RAVREL Trigger: GAGCTCCCTCACTGCTCGCCAACAGGCTGCCTTCCG...CAGTGGCCGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | AGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGACCTCCCGAAGCTCGCCATaGAGCTGCTCCAGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RHMVTWRLPAVWLKCQETSRSSP*SCSRRR Trigger: CCGCCGCCTGGAGCAGCTGCATGGCGAGCTTCGGGA...GGTCTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | ACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGGCCACTGCCCAGGAGGCGAACCTaGAGTGTCCCTGTCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TAGTRRKSLQRQPHGRPLPRRRT*SVPVKA Trigger: TGCCTTGACAGGGACACTGCAGGTTCGCCTCCTGGG...CAGTGGCCGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGGGTGGCGTCGGTCTGTaGCCACGCGCCGCATGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PRHMVTWRLPAVWLKCQEGGVGL*PRAACS Trigger: AGAACATGCGGCGCGTGGCCACAGACCGACGCCACC...CTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | AGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGACCCGCCAGTCCCGCCAGTaGACCCCAATCTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RHMVTWRLPAVWLKCQETRQSRQ*TPISSS Trigger: CGAGCTGGAGATTGGGGTTCACTGGCGGGACTGGCG...GGTCTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGCCATGTGGGGGCGCTTaGTACAAGGAGTCCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PRHMVTWRLPAVWLKCQEPCGGA*YKESLG Trigger: CCCCAGGGACTCCTTGTACCAAGCGCCCCCACATGG...CTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | GTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGAGGCACGAAGGGAGGCTaGACGGTGCGGGCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VIDTAGTRRKSLQRQPHGGTKGG*TVRASK Trigger: CTTGCTGGCCCGCACCGTCCAGCCTCCCTTCGTGCC...TCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGCTCTGGGAGACTaGTGGGGTCAGGGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAQAHGYVEASCSLAEVPGALGD*WGQGWR Trigger: CCTCCAACCCTGACCCCACCAGTCTCCCAGAGCTCC...TGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | AATACTTCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGGGGCAGCAAGCTCATaGCCAGACGCCCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTSAQAHGYVEASCSLAEGAASS*PDAPRL Trigger: CAGCCTGGGGGCGTCTGGTCATGAGCTTGCTGCCCC...TTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGAAGTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | GTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGAAGCTCGCCATGCAGCTaGTCCAGGCGGCGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VIDTAGTRRKSLQRQPHGSSPCS*SRRRLE Trigger: CTCCAACCGCCGCCTGGAGCAGCTGCATGGCGAGCT...TCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | ACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGGCCACTGTTCAGAAGGGCTACCTaGCAGGACAGCCATGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TAGTRRKSLQRQPHGRPLFRRAT*QDSHGR Trigger: TCTCCCATGGCTGTCCTGGCAGGTAGCCCTTCTGAA...CAGTGGCCGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | TCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGGTGCCACAGAACGTaGTGGTCCGGTCACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAQAHGYVEASCSLAEVPGCHRT*WSGHQS Trigger: GCTTTGGTGACCGGACCAGCACGTTCTGTGGCACCC...TGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGGCCACTGCAAAGCAGGCATGGCTaGAGGTCTGCAGACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TAGTRRKSLQRQPHGRPLQSRHG*RSADRQ Trigger: TTGCCTGTCTGCAGACCTCCAGCCATGCCTGCTTTG...CAGTGGCCGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCATGGTGGGGTCAGGGTTaGAGGCAGGCTGGTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SAQAHGYVEASCSLAEVPWWGQG*RQAGEL Trigger: GAGTTCACCAGCCTGCCTCCAACCCTGACCCCACCA...TGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGGCTCTGGGAGACTGGTaGGGTCAGGGTTGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRHSRDTKEKPATAAPRTALGDW*GQGWRQ Trigger: CTGCCTCCAACCCTGACCCCACCAGTCTCCCAGAGC...CGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | GTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGAGGTCACTGGCTCGGCTaGGGCTGGCAGCAGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: VIDTAGTRRKSLQRQPHGGHWLG*GWQQNL Trigger: CAAGTTCTGCTGCCAGCCTCAGCCGAGCCAGTGACC...TCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | AGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGACCCAGCCAGTACCTCACTaGCCAGTTCGCCTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHMVTWRLPAVWLKCQETQPVPH*PVRLHH Trigger: GTGGTGGAGGCGAACTGGCCAGTGAGGTACTGGCTG...GGTCTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAAGGAGTCCCTGGGGCTaGTTCTTGGAGATAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SAQAHGYVEASCSLAEVPRSPWG*FLEIEA Trigger: CGCCTCTATCTCCAAGAACCAGCCCCAGGGACTCCT...TGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGGCCACTGGTAACAAAGCAGGCATaGCTGGAGGTCTGCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: TAGTRRKSLQRQPHGRPLVTKQA*LEVCRQ Trigger: CTGTCTGCAGACCTCCAGCCATGCCTGCTTTGTTAC...CAGTGGCCGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | GTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACAGACGCCCCCAGGCTaGCATGCTGAGGTTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: VIDTAGTRRKSLQRQPHGQTPPG*HAEVHL Trigger: CAGATGAACCTCAGCATGGCAGCCTGGGGGCGTCTG...TCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGATCTTCAGCTCCTTCTaGATGGCTCGGCGGACCATC | + |
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Preference number: 4 (lower is better) Translates to: PRHMVTWRLPAVWLKCQEIFSSF*MARRTI Trigger: GATGGTCCGCCGAGCCATCCAGAAGGAGCTGAAGAT...CTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | GTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGAGCTGGCAGCAGAACTTaGGCATGCAGCTCCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VIDTAGTRRKSLQRQPHGAGSRT*ACSSRS Trigger: GCTTCGGGAGCTGCATGCCCAAGTTCTGCTGCCAGC...TCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | ATACTTCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGCGGTCCTGCATCCTCTaGCCACCAAGCAGCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: ILRPRHMVTWRLPAVWLKRSCIL*PPSSFT Trigger: GGTGAAGCTGCTTGGTGGCCAGAGGATGCAGGACCG...CTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGAAGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | TCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCATCTCCATGCCCTCCTTaGTCTTCAGCTCCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SAQAHGYVEASCSLAEVPSPCPP*SSAPSG Trigger: TCCAGAAGGAGCTGAAGATCAAGGAGGGCATGGAGA...TGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGTACGTAGAGAGTGGGTaGGAGGCAACCTCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: YRHSRDTKEKPATAAPRTYVESG*EATSPA Trigger: TGCTGGAGAGGTTGCCTCCCACCCACTCTCTACGTA...CGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAAGTCCCCATCCTGTCTaGCCCACAACACGATTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SAQAHGYVEASCSLAEVPSPHPV*PTTRLS Trigger: TGACAATCGTGTTGTGGGCCAGACAGGATGGGGACT...TGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGGGTACAAGGAGTCCCTaGGGCTGGTTCTTGGAGATA | + |
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Preference number: 4 (lower is better) Translates to: PRHMVTWRLPAVWLKCQEGTRSP*GWFLEI Trigger: TATCTCCAAGAACCAGCCCCAGGGACTCCTTGTACC...CTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGCCTGTTCCTTTGTACTaGACCAGGAGGACCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PRHMVTWRLPAVWLKCQEPVPLY*TRRTFP Trigger: TGGGAAGGTCCTCCTGGTCCAGTACAAAGGAACAGG...CTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | AATACTTCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAACCGCTGGCACACGTGTaGATCATATTCTCAGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: NTSAQAHGYVEASCSLAEPLAHV*IIFSAP Trigger: GGGGGCTGAGAATATGATTCACACGTGTGCCAGCGG...TTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGAAGTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGCTTCGTGTCTTCTTTTaGGAGCGTCTTCATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PRHMVTWRLPAVWLKCQELRVFF*ERLHGQ Trigger: CTGCCCATGAAGACGCTCTCAAAAGAAGACACGAAG...CTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | TATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGTTCTCGTGTAGGAACTaGAGCCCCAGAACCACACAG | + |
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Preference number: 4 (lower is better) Translates to: YRHSRDTKEKPATAAPRTFSCRN*SPRTTQ Trigger: CTGTGTGGTTCTGGGGCTGCAGTTCCTACACGAGAA...CGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGTCCTGGAGCTGGGCCTaGGCCTCGGCCAGTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: GVYREIEGQSYRHSRDTKSWSWA*ASASAF Trigger: AAAGGCACTGGCCGAGGCCCAGGCCCAGCTCCAGGA...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TGGTCTGGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACGAGGATTCCTGGAGCTaGGCCTGGGCCTCGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: WSGVYREIEGQSYRHSRDEDSWS*AWASAS Trigger: ACTGGCCGAGGCCCAGGCCCAGCTCCAGGAATCCTC...GTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCCAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCAGGAGGTCCAGCTTCTaGGAGGATTCCTGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPRRSSF*EDSWSW Trigger: CCAGCTCCAGGAATCCTCCCAGAAGCTGGACCTCCT...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | AGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGACCTTGAGAGCGTCTTCATaGGCAGGAAGTTACTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RHMVTWRLPAVWLKCQETLRASS*AGSYSG Trigger: CCCCGAGTAACTTCCTGCCCATGAAGACGCTCTCAA...GGTCTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | AATACTTCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAATTCGAGCCCTTGCACTaGCAGAAAGTGGGGACATGG | + |
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Preference number: 4 (lower is better) Translates to: NTSAQAHGYVEASCSLAEFEPLH*QKVGTW Trigger: CCATGTCCCCACTTTCTGTCAGTGCAAGGGCTCGAA...TTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGAAGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCTTGGAGGCAGGCTGGTaGACTCTCCCTCGAAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPLEAGW*TLPRSN Trigger: GTTACTTCGAGGGAGAGTTCACCAGCCTGCCTCCAA...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCTACCAGCAGATCTTTaGAGCCCAGGAGGCGAACCT | + |
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Preference number: 4 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPLPADL*SPGGEP Trigger: AGGTTCGCCTCCTGGGCTGCAAAGATCTGCTGGTAG...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCGAGAAAATGCATCTCTaGCTCTGCAGCCGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPEKMHL*LCSRGL Trigger: GAGGCCTCGGCTGCAGAGGCAGAGATGCATTTTCTC...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | TGGTCTGGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACGAGAGCAGGAAGGGGTaGCCTGTACGCCCCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: WSGVYREIEGQSYRHSRDESRKG*PVRPTV Trigger: GACTGTGGGGCGTACAGGGCACCCCTTCCTGCTCTC...GTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCCAGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCTCTCTTTCTCATCCTTaGGGGCTCTCTGGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPSLSHP*GLSGQS Trigger: GGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGA...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | AATACTTCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAATCCTTTAACATCTGCTaGGCAGCCGCCAGGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: NTSAQAHGYVEASCSLAESFNIC*AAARSF Trigger: GAAGCTCCTGGCGGCTGCCCAGCAGATGTTAAAGGA...TTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGAAGTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGATGCTGAGGTTCATCTaGGAAGCTCTCATGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRHMVTWRLPAVWLKCQEMLRFI*EALMKS Trigger: GGATTTCATGAGAGCTTCCCAGATGAACCTCAGCAT...CTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | AGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGACCGGAAGTCTTGAAGTCTaGGGGGTTTCCTTGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RHMVTWRLPAVWLKCQETGSLEV*GVSLWI Trigger: TATCCACAAGGAAACCCCCCAGACTTCAAGACTTCC...GGTCTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCGGAAAGACATCCTCATaGATCTGCGCCATGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPGKTSS*ICAMRS Trigger: AGACCTCATGGCGCAGATTCATGAGGATGTCTTTCC...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | TATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGTCAGATCCCTGTAAATaGTCCTCTTCTCGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YRHSRDTKEKPATAAPRTSDPCK*SSSRVG Trigger: TCCTACACGAGAAGAGGATCATTTACAGGGATCTGA...CGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | TGGTCTGGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACCTGTCCTTTAACATCTaGTGGGCAGCCGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSGVYREIEGQSYRHSRDLSFNI*WAAARS Trigger: GCTCCTGGCGGCTGCCCAGCAGATGTTAAAGGACAG...GTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCCAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGAGTGCCTTTCGGTCCTaGATCCTCTGGCCACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVYREIEGQSYRHSRDTKSAFRS*ILWPPS Trigger: GCTTGGTGGCCAGAGGATGCAGGACCGAAAGGCACT...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGATGCATCTCTGCCTCTaGAGCCGAGGCCTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVYREIEGQSYRHSRDTKMHLCL*SRGLLS Trigger: TGAAAGGAGGCCTCGGCTGCAGAGGCAGAGATGCAT...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | AGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGACCAGCCAATTCCTTCCTTaGATAGTCCAAAGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RHMVTWRLPAVWLKCQETSQFLP*IVQSLQ Trigger: TTGCAGACTTTGGACTATGCAAGGAAGGAATTGGCT...GGTCTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TGGTCTGGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACCCTTGGGGGTGCCGCTaGCACACGTGTGAATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: WSGVYREIEGQSYRHSRDPWGCR*HTCESY Trigger: ATATGATTCACACGTGTGCCAGCGGCACCCCCAAGG...GTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCCAGACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TGGTCTGGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACGCTCTGGAGAGCCACTaGACTCCAGGCTGCTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: WSGVYREIEGQSYRHSRDALESH*TPGCLS Trigger: AGATAAGCAGCCTGGAGTCCAGTGGCTCTCCAGAGC...GTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCCAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | TGGTCTGGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACTGCCACAGAACGTGCTaGTCCGGTCACCAAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WSGVYREIEGQSYRHSRDCHRTC*SGHQSQ Trigger: TTGGCTTTGGTGACCGGACCAGCACGTTCTGTGGCA...GTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCCAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCGGTGGTCCTGAAGAATaGTTGAACCTTGATCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPGGPEE*LNLDLL Trigger: GAGGAGATCAAGGTTCAACCATTCTTCAGGACCACC...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR TCA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGTTCTGGAGGAGCTTCTaGATGAGTTCGAGCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GVYREIEGQSYRHSRDTKFWRSF*MSSSPC Trigger: GCAAGGGCTCGAACTCATTCAGAAGCTCCTCCAGAA...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCATATTCTCAGCCCCCTaGTTTACCTTTAGCTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPIFSAP*FTFSST Trigger: GGTAGAGCTAAAGGTAAAGCAGGGGGCTGAGAATAT...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCTGGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACCACTGGACTCCAGGCTaGTTATCTTCATCCGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSGVYREIEGQSYRHSRDHWTPG*LSSSGA Trigger: TGCTCCGGATGAAGATAAGCAGCCTGGAGTCCAGTG...GTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCCAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | TGGTCTGGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACGGGGTTCCCAAGCATTaGCATCCAAAGTTCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSGVYREIEGQSYRHSRDGVPKH*HPKFLG Trigger: ACCCAAGAACTTTGGATGGCAATGCTTGGGAACCCC...GTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCCAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGCGGCCTAGCACTTCCTaGTTCTTCAACGCCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GVYREIEGQSYRHSRDTKRPSTS*FFNALI Trigger: TATCAAGGCGTTGAAGAAGCAGGAAGTGCTAGGCCG...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR GCA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGCAGGACTCCAGGAACTaGTCAGACACGAAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVYREIEGQSYRHSRDTKQDSRN*SDTKSK Trigger: CTTTGACTTCGTGTCTGAGCAGTTCCTGGAGTCCTG...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CCA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGGAGATGATAAAACTCTaGTCCCAGGATTTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVYREIEGQSYRHSRDTKEMIKL*SQDFSA Trigger: GGCTGAGAAATCCTGGGACCAGAGTTTTATCATCTC...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS GCA 90 bp | ACCTGCAGCTGCCTATGTAAAGCCTCCGAGAGCCGAGCCCTGGACTaGTCCGCCCGCGGCTGGGGTTCCGAGGTCACTGGCTCGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TCSCLCKASESRALD*SARGWGSEVTGSAE Trigger: CTCAGCCGAGCCAGTGACCTCGGAACCCCAGCCGCGGGCGGAGCAGTCCAGGGCTCGGCTCTCGGAGGCTTTACATAGGCAGCTGCAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
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| CDS CCA 90 bp | GCTCTACCTGCAGCTGCCTATGTAAAGCCTCCGAGAGCCGAGCCCTaGACTGCTCCGCCCGCGGCTGGGGTTCCGAGGTCACTGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPAAAYVKPPRAEP*TAPPAAGVPRSLAR Trigger: CCGAGCCAGTGACCTCGGAACCCCAGCCGCGGGCGGAGCAGTCCAGGGCTCGGCTCTCGGAGGCTTTACATAGGCAGCTGCAGGTAGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
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| CDS TCA 90 bp | AGCTGCTCCAGGCGGCGGTTGGAGGCCCTAAGCAGTTGCTGCACATaGCCCAGGTGGCGTCGGTCTGTGGCCACGCGCCGCATGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCSRRRLEALSSCCT*PRWRRSVATRRMFS Trigger: GGAGAACATGCGGCGCGTGGCCACAGACCGACGCCACCTGGGTCATGTGCAGCAACTGCTTAGGGCCTCCAACCGCCGCCTGGAGCAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 ENSMUST00000150770.8 |
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| CDS CCA 90 bp | TCAGCTCCTTCTGGATGGCTCGGCGGACCATCTCTTTCTCATCCTTaGGGGCTCTCTGGCCAGTCCCAGGCTGGCGCACAGCCCCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAPSGWLGGPSLSHP*GLSGQSQAGAQPPP Trigger: CGGAGGGGGCTGTGCGCCAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGAAGGAGCTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125346.8 |
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| CDS GCA 90 bp | TGCAGCCACAGCAGCCTCTACTCGAAGTCGGTGCTGCAGCTCCTCTaGCAGCAAGTCGGGGCCTGGCTCTGGAGAGCCACTGGACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSHSSLYSKSVLQLL*QQVGAWLWRATGLQ Trigger: CTGGAGTCCAGTGGCTCTCCAGAGCCAGGCCCCGACTTGCTGGCAGAGGAGCTGCAGCACCGACTTCGAGTAGAGGCTGCTGTGGCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
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| CDS CCA 90 bp | TGCAGGTCTAGGGTCCATGTGGGGGCGCTTGGTACAAGGAGTCCCTaGGGCTGGTTCTTGGAGATAGAGGCGCGGGGGCTTGGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRSRVHVGALGTRSP*GWFLEIEARGLGRR Trigger: CCTCCTCCCAAGCCCCCGCGCCTCTATCTCCAAGAACCAGCCCCAGGGACTCCTTGTACCAAGCGCCCCCACATGGACCCTAGACCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS TCA 90 bp | CAGACACGAAGTCAAAGTCCCGGAAGGCAGCCTGTTGGCGAGCAGTaGGGGAGCTCTGGGAGACTGGTGGGGTCAGGGTTGGAGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTRSQSPGRQPVGEQ*GSSGRLVGSGLEAG Trigger: GCCTGCCTCCAACCCTGACCCCACCAGTCTCCCAGAGCTCCCTCACTGCTCGCCAACAGGCTGCCTTCCGGGACTTTGACTTCGTGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CCA 90 bp | GCAGCTCCTCTGCCAGCAAGTCGGGGCCTGGCTCTGGAGAGCCACTaGACTCCAGGCTGCTTATCTTCATCCGGAGCAGGGCCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAPLPASRGLALESH*TPGCLSSSGAGPPS Trigger: TGAAGGTGGCCCTGCTCCGGATGAAGATAAGCAGCCTGGAGTCCAGTGGCTCTCCAGAGCCAGGCCCCGACTTGCTGGCAGAGGAGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
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| CDS-3UTR CAA 90 bp | TATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGCCCTGGGGCTGGTTCTaGGAGATAGAGGCGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YRHSRDTKEKPATAAPRTPWGWF*EIEARG Trigger: CCCCCGCGCCTCTATCTCCAAGAACCAGCCCCAGGG...CGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS TCA 90 bp | GGGAGCTCTGGGAGACTGGTGGGGTCAGGGTTGGAGGCAGGCTGGTaGACTCTCCCTCGAAGTAACGAAGGTCTGCAGGGCCACAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSGRLVGSGLEAGW*TLPRSNEGLQGHRE Trigger: CTCTCTGTGGCCCTGCAGACCTTCGTTACTTCGAGGGAGAGTTCACCAGCCTGCCTCCAACCCTGACCCCACCAGTCTCCCAGAGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS GCA 90 bp | ACATTCTTGGCACCTGCAGCCACAGCAGCCTCTACTCGAAGTCGGTaGTGCAGCTCCTCTGCCAGCAAGTCGGGGCCTGGCTCTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TFLAPAATAASTRSR*CSSSASKSGPGSGE Trigger: CTCTCCAGAGCCAGGCCCCGACTTGCTGGCAGAGGAGCTGCAGCACCGACTTCGAGTAGAGGCTGCTGTGGCTGCAGGTGCCAAGAATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
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| CDS GCA 90 bp | GGTTGGAGGCAGGCTGGTGAACTCTCCCTCGAAGTAACGAAGGTCTaGAGGGCCACAGAGAGTAGGCACGAAGGGAGGCTGGACGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GWRQAGELSLEVTKV*RATESRHEGRLDGA Trigger: CGCACCGTCCAGCCTCCCTTCGTGCCTACTCTCTGTGGCCCTGCAGACCTTCGTTACTTCGAGGGAGAGTTCACCAGCCTGCCTCCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CCA 90 bp | AAGTCGGTGCTGCAGCTCCTCTGCCAGCAAGTCGGGGCCTGGCTCTaGAGAGCCACTGGACTCCAGGCTGCTTATCTTCATCCGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSVLQLLCQQVGAWL*RATGLQAAYLHPEQ Trigger: CTGCTCCGGATGAAGATAAGCAGCCTGGAGTCCAGTGGCTCTCCAGAGCCAGGCCCCGACTTGCTGGCAGAGGAGCTGCAGCACCGACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
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| CDS GCA 90 bp | CCAGCAAGTCGGGGCCTGGCTCTGGAGAGCCACTGGACTCCAGGCTaGTTATCTTCATCCGGAGCAGGGCCACCTTCAGTTGACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PASRGLALESHWTPG*LSSSGAGPPSVDCP Trigger: AGGACAGTCAACTGAAGGTGGCCCTGCTCCGGATGAAGATAAGCAGCCTGGAGTCCAGTGGCTCTCCAGAGCCAGGCCCCGACTTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
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| CDS CCA 90 bp | TTGGCGAGCAGTGAGGGAGCTCTGGGAGACTGGTGGGGTCAGGGTTaGAGGCAGGCTGGTGAACTCTCCCTCGAAGTAACGAAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LASSEGALGDWWGQG*RQAGELSLEVTKVC Trigger: GCAGACCTTCGTTACTTCGAGGGAGAGTTCACCAGCCTGCCTCCAACCCTGACCCCACCAGTCTCCCAGAGCTCCCTCACTGCTCGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGGGAGGCCCTAAGCAGTaGCTGCACATGACCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PRHMVTWRLPAVWLKCQEGGPKQ*LHMTQV Trigger: CACCTGGGTCATGTGCAGCAACTGCTTAGGGCCTCC...CTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CAA 90 bp | ATACTTCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCTCCAGGCGGCGGTaGGAGGCCCTAAGCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILRPRHMVTWRLPAVWLKCSRRR*EALSSC Trigger: GCAACTGCTTAGGGCCTCCAACCGCCGCCTGGAGCA...CTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGAAGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CCA 90 bp | GGCCCACAACACGATTGTCAACCTTCAACACAGCCAGTACCTCACTaGCCAGTTCGCCTCCACCACGCTGCTGCCGGGACCTTGTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPQHDCQPSTQPVPH*PVRLHHAAAGTLFG Trigger: TCCGAACAAGGTCCCGGCAGCAGCGTGGTGGAGGCGAACTGGCCAGTGAGGTACTGGCTGTGTTGAAGGTTGACAATCGTGTTGTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CCA 90 bp | AGGAACTGCTCAGACACGAAGTCAAAGTCCCGGAAGGCAGCCTGTTaGCGAGCAGTGAGGGAGCTCTGGGAGACTGGTGGGGTCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RNCSDTKSKSRKAAC*RAVRELWETGGVRV Trigger: AACCCTGACCCCACCAGTCTCCCAGAGCTCCCTCACTGCTCGCCAACAGGCTGCCTTCCGGGACTTTGACTTCGTGTCTGAGCAGTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CCA 90 bp | AGTGTCCCCGACCCAGCACAGCCAAACATCGGAAGTCTTGAAGTCTaGGGGGTTTCCTTGTGGATAAGGCTGCCAGGGCGGGCACTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SVPDPAQPNIGSLEV*GVSLWIRLPGRALL Trigger: CAGTAGTGCCCGCCCTGGCAGCCTTATCCACAAGGAAACCCCCCAGACTTCAAGACTTCCGATGTTTGGCTGTGCTGGGTCGGGGACACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CAA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCGGCTGGCAGCAGAACTaGGGCATGCAGCTCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPGWQQN*GMQLPK Trigger: CTTCGGGAGCTGCATGCCCAAGTTCTGCTGCCAGCC...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CAA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCGCTGCTGCCGGGACCTaGTTCGGAGCCAGCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPAAAGT*FGASFQ Trigger: CTGAAAGCTGGCTCCGAACAAGGTCCCGGCAGCAGC...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS-3UTR CAA 90 bp | ACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCACGGACGGCCACTGTATTTCCCTGTTCCTTaGTACTGGACCAGGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TAGTRRKSLQRQPHGRPLYFPVP*YWTRRT Trigger: GGTCCTCCTGGTCCAGTACAAAGGAACAGGGAAATA...CAGTGGCCGTCCGTGGGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS TCA 90 bp | AGCTTCAGAAACGCCACACCACACAACTGTCGCCAGTCCCGCCAGTaGACCCCAATCTCCAGCTCGCGAGCTCGGTCCAAGGAGATGATA | + |
|
Preference number: 5 (lower is better) Translates to: SFRNATPHNCRQSRQ*TPISSSRARSKEMI Trigger: TATCATCTCCTTGGACCGAGCTCGCGAGCTGGAGATTGGGGTTCACTGGCGGGACTGGCGACAGTTGTGTGGTGTGGCGTTTCTGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 90 bp | CCAATCTCCAGCTCGCGAGCTCGGTCCAAGGAGATGATAAAACTCTaGTCCCAGGATTTCTCAGCCACCAGTCCCCATCCTGTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PISSSRARSKEMIKL*SQDFSATSPHPVWP Trigger: GGGCCAGACAGGATGGGGACTGGTGGCTGAGAAATCCTGGGACCAGAGTTTTATCATCTCCTTGGACCGAGCTCGCGAGCTGGAGATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR CAA 90 bp | AGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGACCAGCTTCACCACATTCTaGGCACCTGCAGCCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHMVTWRLPAVWLKCQETSFTTF*APAATA Trigger: TGCTGTGGCTGCAGGTGCCAAGAATGTGGTGAAGCT...GGTCTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS GCA 90 bp | CCAGGCACAGCTACCAGCAGATCTTTGCAGCCCAGGAGGCGAACCTaGAGTGTCCCTGTCAAGGCAATAGGTTTCACAAGTGTCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGTATSRSLQPRRRT*SVPVKAIGFTSVPK Trigger: TTTGGGGACACTTGTGAAACCTATTGCCTTGACAGGGACACTGCAGGTTCGCCTCCTGGGCTGCAAAGATCTGCTGGTAGCTGTGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 90 bp | AAGCTCATGACCAGACGCCCCCAGGCTGCCATGCTGAGGTTCATCTaGGAAGCTCTCATGAAATCCCGGCCTCTCCGCTTAGAGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: KLMTRRPQAAMLRFI*EALMKSRPLRLEKM Trigger: CATTTTCTCTAAGCGGAGAGGCCGGGATTTCATGAGAGCTTCCCAGATGAACCTCAGCATGGCAGCCTGGGGGCGTCTGGTCATGAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR CAA 90 bp | AGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGACCGCTTCGTGTCTTCTTTaGAGAGCGTCTTCATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHMVTWRLPAVWLKCQETASCLL*RASSWA Trigger: TGCCCATGAAGACGCTCTCAAAAGAAGACACGAAGC...GGTCTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS TCA 90 bp | CGAGCCCTTGCACTGACAGAAAGTGGGGACATGGGACATCAGCACTaGCGATGCATTCAAATACCTCCTCTTCTGTGTCCCCCGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: RALALTESGDMGHQH*RCIQIPPLLCPPGM Trigger: CATTCCCGGGGGACACAGAAGAGGAGGTATTTGAATGCATCGTCAGTGCTGATGTCCCATGTCCCCACTTTCTGTCAGTGCAAGGGCTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR CAA 90 bp | AATACTTCGGCCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAATTCTCCATGCCCTCCTaGATCTTCAGCTCCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NTSAQAHGYVEASCSLAEFSMPS*IFSSFW Trigger: CCAGAAGGAGCTGAAGATCAAGGAGGGCATGGAGAA...TTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGGCCGAAGTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGGCTACCAGCAGATCTTaGCAGCCCAGGAGGCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: GVYREIEGQSYRHSRDTKATSRS*QPRRRT Trigger: GGTTCGCCTCCTGGGCTGCAAAGATCTGCTGGTAGC...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR CAA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCTGGCCCACAACACGATaGTCAACCTTCAACACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPWPTTR*STFNTA Trigger: GGCTGTGTTGAAGGTTGACAATCGTGTTGTGGGCCA...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR CAA 90 bp | GACAGAGTTATAGACACAGCAGGGACACGAAGGAAAAGCCTGCAACGGCAGCCCCCAAAGTCTGCAATCTaGAGGAAACCCTGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: DRVIDTAGTRRKSLQRQPPKSAI*RKPWAS Trigger: GGATGCCCAGGGTTTCCTCAAGATTGCAGACTTTGG...GGGCTGCCGTTGCAGGCTTTTCCTTCGTGTCCCTGCTGTGTCTATAACTCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCACATGGTTACGTGGAGGCTTCCTGCAGTCTGGCTGAAGTGCCAGGAGAAGCCAATTCCTTCCTaGCATAGTCCAAAGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRHMVTWRLPAVWLKCQEKPIPS*HSPKSA Trigger: TGCAGACTTTGGACTATGCAAGGAAGGAATTGGCTT...CTCCTGGCACTTCAGCCAGACTGCAGGAAGCCTCCACGTAACCATGTGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGGGGGGTTCCCAAGCATaGCCATCCAAAGTTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVYREIEGQSYRHSRDTKGGSQA*PSKVLG Trigger: CCCAAGAACTTTGGATGGCAATGCTTGGGAACCCCC...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTCTACCGAGAAATAGAAGGACAGAGTTATAGACACAGCAGGGACACGAAGGGTCCTGAAGAATGGTaGAACCTTGATCTCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVYREIEGQSYRHSRDTKGPEEW*NLDLLG Trigger: GCCGAGGAGATCAAGGTTCAACCATTCTTCAGGACC...CTTCGTGTCCCTGCTGTGTCTATAACTCTGTCCTTCTATTTCTCGGTAGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CAA 90 bp | CTCGCCATGCAGCTGCTCCAGGCGGCGGTTGGAGGCCCTAAGCAGTaGCTGCACATGACCCAGGTGGCGTCGGTCTGTGGCCACGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LAMQLLQAAVGGPKQ*LHMTQVASVCGHAP Trigger: CGGCGCGTGGCCACAGACCGACGCCACCTGGGTCATGTGCAGCAACTGCTTAGGGCCTCCAACCGCCGCCTGGAGCAGCTGCATGGCGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 ENSMUST00000150770.8 |
||
| CDS TCA 72 bp | AGGCGGCGGTTGGAGGCCCTAAGCAGTTGCTGCACATaGCCCAGGTGGCGTCGGTCTGTGGCCACGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRLEALSSCCT*PRWRRSVATRR Trigger: GCGGCGCGTGGCCACAGACCGACGCCACCTGGGTCATGTGCAGCAACTGCTTAGGGCCTCCAACCGCCGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 ENSMUST00000150770.8 |
||
| CDS CCA 72 bp | CGGCGGACCATCTCTTTCTCATCCTTGGGGGCTCTCTaGCCAGTCCCAGGCTGGCGCACAGCCCCCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRTISFSSLGAL*PVPGWRTAPSG Trigger: GCCGGAGGGGGCTGTGCGCCAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000125346.8 |
||
| CDS GCA 72 bp | TGCCTATGTAAAGCCTCCGAGAGCCGAGCCCTGGACTaGTCCGCCCGCGGCTGGGGTTCCGAGGTCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CLCKASESRALD*SARGWGSEVTG Trigger: GCCAGTGACCTCGGAACCCCAGCCGCGGGCGGAGCAGTCCAGGGCTCGGCTCTCGGAGGCTTTACATAGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
||
| CDS GCA 72 bp | GCACCTGCAGCCACAGCAGCCTCTACTCGAAGTCGGTaGTGCAGCTCCTCTGCCAGCAAGTCGGGGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: APAATAASTRSR*CSSSASKSGPG Trigger: GCCAGGCCCCGACTTGCTGGCAGAGGAGCTGCAGCACCGACTTCGAGTAGAGGCTGCTGTGGCTGCAGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
||
| CDS CCA 72 bp | TCTGCAGGGCCACAGAGAGTAGGCACGAAGGGAGGCTaGACGGTGCGGGCCAGCAAGGCCTGCCAGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SAGPQRVGTKGG*TVRASKACQLV Trigger: CACCAACTGGCAGGCCTTGCTGGCCCGCACCGTCCAGCCTCCCTTCGTGCCTACTCTCTGTGGCCCTGCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | CGGAAGGCAGCCTGTTGGCGAGCAGTGAGGGAGCTCTaGGAGACTGGTGGGGTCAGGGTTGGAGGCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RKAACWRAVREL*ETGGVRVGGRL Trigger: CAGCCTGCCTCCAACCCTGACCCCACCAGTCTCCCAGAGCTCCCTCACTGCTCGCCAACAGGCTGCCTTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CAA 72 bp | CAGCTGCTCCAGGCGGCGGTTGGAGGCCCTAAGCAGTaGCTGCACATGACCCAGGTGGCGTCGGTCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLLQAAVGGPKQ*LHMTQVASVCG Trigger: GCCACAGACCGACGCCACCTGGGTCATGTGCAGCAACTGCTTAGGGCCTCCAACCGCCGCCTGGAGCAGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 ENSMUST00000150770.8 |
||
| CDS GCA 72 bp | ACTTGGGCATGCAGCTCCCGAAGCTCGCCATGCAGCTaGTCCAGGCGGCGGTTGGAGGCCCTAAGCAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TWACSSRSSPCS*SRRRLEALSSC Trigger: GCAACTGCTTAGGGCCTCCAACCGCCGCCTGGAGCAGCTGCATGGCGAGCTTCGGGAGCTGCATGCCCAAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 ENSMUST00000150770.8 |
||
| CDS GCA 72 bp | AGCAGAACTTGGGCATGCAGCTCCCGAAGCTCGCCATaGAGCTGCTCCAGGCGGCGGTTGGAGGCCCTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRTWACSSRSSP*SCSRRRLEALS Trigger: GCTTAGGGCCTCCAACCGCCGCCTGGAGCAGCTGCATGGCGAGCTTCGGGAGCTGCATGCCCAAGTTCTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 ENSMUST00000150770.8 |
||
| CDS GCA 72 bp | CCTGCAGCCACAGCAGCCTCTACTCGAAGTCGGTGCTaGAGCTCCTCTGCCAGCAAGTCGGGGCCTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PAATAASTRSRC*SSSASKSGPGS Trigger: AGAGCCAGGCCCCGACTTGCTGGCAGAGGAGCTGCAGCACCGACTTCGAGTAGAGGCTGCTGTGGCTGCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
||
| CDS CAA 90 bp | TTCAGCTCCTTCTGGATGGCTCGGCGGACCATCTCTTTCTCATCCTaGGGGGCTCTCTGGCCAGTCCCAGGCTGGCGCACAGCCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSSFWMARRTISFSS*GALWPVPGWRTAPS Trigger: GGAGGGGGCTGTGCGCCAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGAAGGAGCTGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000125346.8 |
||
| CDS GCA 72 bp | GCTGGGCAGCCGCCAGGAGCTTCCTCTCCTTGGGGGTaGCGCTGGCACACGTGTGAATCATATTCTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGQPPGASSPWG*RWHTCESYSQP Trigger: GGGCTGAGAATATGATTCACACGTGTGCCAGCGGCACCCCCAAGGAGAGGAAGCTCCTGGCGGCTGCCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
||
| CDS GCA 72 bp | AGCAGCCTCTACTCGAAGTCGGTGCTGCAGCTCCTCTaGCAGCAAGTCGGGGCCTGGCTCTGGAGAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SSLYSKSVLQLL*QQVGAWLWRAT Trigger: AGTGGCTCTCCAGAGCCAGGCCCCGACTTGCTGGCAGAGGAGCTGCAGCACCGACTTCGAGTAGAGGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
||
| CDS CCA 72 bp | CTGCCAGCAAGTCGGGGCCTGGCTCTGGAGAGCCACTaGACTCCAGGCTGCTTATCTTCATCCGGAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPASRGLALESH*TPGCLSSSGAG Trigger: CCCTGCTCCGGATGAAGATAAGCAGCCTGGAGTCCAGTGGCTCTCCAGAGCCAGGCCCCGACTTGCTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
||
| CDS CCA 72 bp | AGGGTCCATGTGGGGGCGCTTGGTACAAGGAGTCCCTaGGGCTGGTTCTTGGAGATAGAGGCGCGGGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RVHVGALGTRSP*GWFLEIEARGL Trigger: AAGCCCCCGCGCCTCTATCTCCAAGAACCAGCCCCAGGGACTCCTTGTACCAAGCGCCCCCACATGGACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | TCTGGATGGCTCGGCGGACCATCTCTTTCTCATCCTTaGGGGCTCTCTGGCCAGTCCCAGGCTGGCGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SGWLGGPSLSHP*GLSGQSQAGAQ Trigger: CTGTGCGCCAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125346.8 |
||
| CDS TCA 72 bp | AACGCCACACCACACAACTGTCGCCAGTCCCGCCAGTaGACCCCAATCTCCAGCTCGCGAGCTCGGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: NATPHNCRQSRQ*TPISSSRARSK Trigger: CTTGGACCGAGCTCGCGAGCTGGAGATTGGGGTTCACTGGCGGGACTGGCGACAGTTGTGTGGTGTGGCGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS GCA 72 bp | CGGGGCCTGGCTCTGGAGAGCCACTGGACTCCAGGCTaGTTATCTTCATCCGGAGCAGGGCCACCTTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RGLALESHWTPG*LSSSGAGPPSV Trigger: AACTGAAGGTGGCCCTGCTCCGGATGAAGATAAGCAGCCTGGAGTCCAGTGGCTCTCCAGAGCCAGGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
||
| CDS GCA 72 bp | GGACCTTGTTCGGAGCCAGCTTTCAGAAGGGCTACCTaGCAGGACAGCCATGGGAGACCGTCCAGGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPCSEPAFRRAT*QDSHGRPSRHS Trigger: GCTGTGCCTGGACGGTCTCCCATGGCTGTCCTGGCAGGTAGCCCTTCTGAAAGCTGGCTCCGAACAAGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS GCA 72 bp | AGTACCTCACTGGCCAGTTCGCCTCCACCACGCTGCTaGCGGGACCTTGTTCGGAGCCAGCTTTCAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: STSLASSPPPRC*RDLVRSQLSEG Trigger: CCCTTCTGAAAGCTGGCTCCGAACAAGGTCCCGGCAGCAGCGTGGTGGAGGCGAACTGGCCAGTGAGGTACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS GCA 72 bp | GCCAGTACCTCACTGGCCAGTTCGCCTCCACCACGCTaGTGCCGGGACCTTGTTCGGAGCCAGCTTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASTSLASSPPPR*CRDLVRSQLSE Trigger: TTCTGAAAGCTGGCTCCGAACAAGGTCCCGGCAGCAGCGTGGTGGAGGCGAACTGGCCAGTGAGGTACTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CAA 72 bp | TTCTGGATGGCTCGGCGGACCATCTCTTTCTCATCCTaGGGGGCTCTCTGGCCAGTCCCAGGCTGGCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: FWMARRTISFSS*GALWPVPGWRT Trigger: TGTGCGCCAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125346.8 |
||
| CDS CAA 90 bp | CAGGAACTGCTCAGACACGAAGTCAAAGTCCCGGAAGGCAGCCTGTaGGCGAGCAGTGAGGGAGCTCTGGGAGACTGGTGGGGTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QELLRHEVKVPEGSL*ASSEGALGDWWGQG Trigger: ACCCTGACCCCACCAGTCTCCCAGAGCTCCCTCACTGCTCGCCAACAGGCTGCCTTCCGGGACTTTGACTTCGTGTCTGAGCAGTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS GCA 72 bp | TGGGAGACCGTCCAGGCACAGCTACCAGCAGATCTTTaGAGCCCAGGAGGCGAACCTGCAGTGTCCCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: WETVQAQLPADL*SPGGEPAVSLS Trigger: TGACAGGGACACTGCAGGTTCGCCTCCTGGGCTGCAAAGATCTGCTGGTAGCTGTGCCTGGACGGTCTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | TGGGCCTCGGCCAGTGCCTTTCGGTCCTGCATCCTCTaGCCACCAAGCAGCTTCACCACATTCTTGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: WASASAFRSCIL*PPSSFTTFLAP Trigger: AGGTGCCAAGAATGTGGTGAAGCTGCTTGGTGGCCAGAGGATGCAGGACCGAAAGGCACTGGCCGAGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
||
| CDS CCA 72 bp | CACGATTGTCAACCTTCAACACAGCCAGTACCTCACTaGCCAGTTCGCCTCCACCACGCTGCTGCCGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: HDCQPSTQPVPH*PVRLHHAAAGT Trigger: GGTCCCGGCAGCAGCGTGGTGGAGGCGAACTGGCCAGTGAGGTACTGGCTGTGTTGAAGGTTGACAATCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | TCTTCATGGGCAGGAAGTTACTCGGGGAAGCAGCACTaGGGGTCCCACAGACCGCTGTTGAAGGGCGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSWAGSYSGKQH*GSHRPLLKGAL Trigger: AAGGGCGCCCTTCAACAGCGGTCTGTGGGACCCCCAGTGCTGCTTCCCCGAGTAACTTCCTGCCCATGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | TCAGACACGAAGTCAAAGTCCCGGAAGGCAGCCTGTTaGCGAGCAGTGAGGGAGCTCTGGGAGACTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SDTKSKSRKAAC*RAVRELWETGG Trigger: CCCACCAGTCTCCCAGAGCTCCCTCACTGCTCGCCAACAGGCTGCCTTCCGGGACTTTGACTTCGTGTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CAA 72 bp | GGCGCGGGGGCTTGGGAGGAGGCTTCGTGTCTTCTTTaGAGAGCGTCTTCATGGGCAGGAAGTTACTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAGAWEEASCLL*RASSWAGSYSG Trigger: CCCCGAGTAACTTCCTGCCCATGAAGACGCTCTCAAAAGAAGACACGAAGCCTCCTCCCAAGCCCCCGCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CAA 72 bp | CTCAGACACGAAGTCAAAGTCCCGGAAGGCAGCCTGTaGGCGAGCAGTGAGGGAGCTCTGGGAGACTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRHEVKVPEGSL*ASSEGALGDWW Trigger: CCACCAGTCTCCCAGAGCTCCCTCACTGCTCGCCAACAGGCTGCCTTCCGGGACTTTGACTTCGTGTCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS GCA 72 bp | CAGGCTGGTGAACTCTCCCTCGAAGTAACGAAGGTCTaGAGGGCCACAGAGAGTAGGCACGAAGGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QAGELSLEVTKV*RATESRHEGRL Trigger: CAGCCTCCCTTCGTGCCTACTCTCTGTGGCCCTGCAGACCTTCGTTACTTCGAGGGAGAGTTCACCAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | TCTGGATGGCTCGGCGGACCATCTCTTTCTCATCCTTaGGGGCTCTCTGGCCAGTCCCAGGCTTTCGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SGWLGGPSLSHP*GLSGQSQAFGV Trigger: AACACCGAAAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | ACATCTGCTGGGCAGCCGCCAGGAGCTTCCTCTCCTTaGGGGTGCCGCTGGCACACGTGTGAATCATATTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSAGQPPGASSP*GCRWHTCESYS Trigger: AGAATATGATTCACACGTGTGCCAGCGGCACCCCCAAGGAGAGGAAGCTCCTGGCGGCTGCCCAGCAGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
||
| CDS CCA 72 bp | GCCAGCTTTCAGAAGGGCTACCTGCCAGGACAGCCATaGGAGACCGTCCAGGCACAGCTACCAGCAGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASFQKGYLPGQP*ETVQAQLPADL Trigger: AAGATCTGCTGGTAGCTGTGCCTGGACGGTCTCCCATGGCTGTCCTGGCAGGTAGCCCTTCTGAAAGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | ACCAGACGCCCCCAGGCTGCCATGCTGAGGTTCATCTaGGAAGCTCTCATGAAATCCCGGCCTCTCCGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: TRRPQAAMLRFI*EALMKSRPLRL Trigger: TAAGCGGAGAGGCCGGGATTTCATGAGAGCTTCCCAGATGAACCTCAGCATGGCAGCCTGGGGGCGTCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CAA 72 bp | TTCTGGATGGCTCGGCGGACCATCTCTTTCTCATCCTaGGGGGCTCTCTGGCCAGTCCCAGGCTTTCGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FWMARRTISFSS*GALWPVPGFRC Trigger: ACACCGAAAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | GACCCAGCACAGCCAAACATCGGAAGTCTTGAAGTCTaGGGGGTTTCCTTGTGGATAAGGCTGCCAGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: DPAQPNIGSLEV*GVSLWIRLPGR Trigger: CCGCCCTGGCAGCCTTATCCACAAGGAAACCCCCCAGACTTCAAGACTTCCGATGTTTGGCTGTGCTGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
||
| CDS CCA 72 bp | TCTGGATGGCTCGGCGGACCATCTCTTTCTCATCCTTaGGGGCTCTCTGGCCAGTCCCAGGCTTTAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGWLGGPSLSHP*GLSGQSQALTV Trigger: GACAGTTAAAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150770.8 |
||
| CDS CAA 72 bp | GCCACCAGTCCCCATCCTGTCTGGCCCACAACACGATaGTCAACCTTCAACACAGCCAGTACCTCACTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ATSPHPVWPTTR*STFNTASTSLA Trigger: GGCCAGTGAGGTACTGGCTGTGTTGAAGGTTGACAATCGTGTTGTGGGCCAGACAGGATGGGGACTGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CAA 72 bp | CAGCAAGGCCTGCCAGTTGGTGGTCCTGAAGAATGGTaGAACCTTGATCTCCTCGGCGTCCCGTTCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QQGLPVGGPEEW*NLDLLGVPFSC Trigger: GCAGGAGAACGGGACGCCGAGGAGATCAAGGTTCAACCATTCTTCAGGACCACCAACTGGCAGGCCTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CAA 90 bp | TTCAGCTCCTTCTGGATGGCTCGGCGGACCATCTCTTTCTCATCCTaGGGGGCTCTCTGGCCAGTCCCAGGCTTTAACTGTCCTGGCATA | + |
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Preference number: 6 (lower is better) Translates to: FSSFWMARRTISFSS*GALWPVPGFNCPGI Trigger: TATGCCAGGACAGTTAAAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGAAGGAGCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150770.8 |
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| CDS TCA 72 bp | CTGCTTATCTTCATCCGGAGCAGGGCCACCTTCAGTTaGCTGTCCTTTAACATCTGCTGGGCAGCCGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLIFIRSRATFS*LSFNICWAAAR Trigger: CCTGGCGGCTGCCCAGCAGATGTTAAAGGACAGTCAACTGAAGGTGGCCCTGCTCCGGATGAAGATAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 |
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| CDS CCA 72 bp | AAAGTTCTTGGGTCACCCTGCTACGTAGAGAGTGGGTaGGAGGCAACCTCTCCAGCAGCAATTCCAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KVLGSPCYVESG*EATSPAAIPGP Trigger: TGGCCCTGGAATTGCTGCTGGAGAGGTTGCCTCCCACCCACTCTCTACGTAGCAGGGTGACCCAAGAACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CCA 72 bp | CGGCGGACCATCTCTTTCTCATCCTTGGGGGCTCTCTaGCCAGTCCCAGGCTTTAACTGTCCTGGCATAGAA | + |
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Preference number: 6 (lower is better) Translates to: RRTISFSSLGAL*PVPGFNCPGIE Trigger: TTCTATGCCAGGACAGTTAAAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150770.8 |
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| CDS CAA 72 bp | TTCTGGATGGCTCGGCGGACCATCTCTTTCTCATCCTaGGGGGCTCTCTGGCCAGTCCCAGGCTTTAACTGT | + |
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Preference number: 6 (lower is better) Translates to: FWMARRTISFSS*GALWPVPGFNC Trigger: ACAGTTAAAGCCTGGGACTGGCCAGAGAGCCCCCAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150770.8 |
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| CDS CAA 90 bp | GATTTCTCAGCCACCAGTCCCCATCCTGTCTGGCCCACAACACGATaGTCAACCTTCAACACAGCCAGTACCTCACTGGCCAGTTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: DFSATSPHPVWPTTR*STFNTASTSLASSP Trigger: AGGCGAACTGGCCAGTGAGGTACTGGCTGTGTTGAAGGTTGACAATCGTGTTGTGGGCCAGACAGGATGGGGACTGGTGGCTGAGAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CCA 72 bp | AGCTCGCGAGCTCGGTCCAAGGAGATGATAAAACTCTaGTCCCAGGATTTCTCAGCCACCAGTCCCCATCCT | + |
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Preference number: 6 (lower is better) Translates to: SSRARSKEMIKL*SQDFSATSPHP Trigger: AGGATGGGGACTGGTGGCTGAGAAATCCTGGGACCAGAGTTTTATCATCTCCTTGGACCGAGCTCGCGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS TCA 72 bp | CTGGAGGAGCTTCTGAATGAGTTCGAGCCCTTGCACTaGCAGAAAGTGGGGACATGGGACATCAGCACTGAC | + |
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Preference number: 6 (lower is better) Translates to: LEELLNEFEPLH*QKVGTWDISTD Trigger: GTCAGTGCTGATGTCCCATGTCCCCACTTTCTGTCAGTGCAAGGGCTCGAACTCATTCAGAAGCTCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS GCA 72 bp | GCTACCAGCAGATCTTTGCAGCCCAGGAGGCGAACCTaGAGTGTCCCTGTCAAGGCAATAGGTTTCACAAGT | + |
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Preference number: 6 (lower is better) Translates to: ATSRSLQPRRRT*SVPVKAIGFTS Trigger: ACTTGTGAAACCTATTGCCTTGACAGGGACACTGCAGGTTCGCCTCCTGGGCTGCAAAGATCTGCTGGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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| CDS CCA 72 bp | ATGTTCTCCATGCCCTCCTTGATCTTCAGCTCCTTCTaGATGGCTCGGCGGACCATCTCTTTCTCATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: MFSMPSLIFSSF*MARRTISFSSL Trigger: CAAGGATGAGAAAGAGATGGTCCGCCGAGCCATCCAGAAGGAGCTGAAGATCAAGGAGGGCATGGAGAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045246.8 ENSMUST00000125346.8 ENSMUST00000150770.8 |
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| CDS CAA 72 bp | TCACAAGTGTCCCCAAAGGTTGGGGGTTCCCAAGCATaGCCATCCAAAGTTCTTGGGTCACCCTGCTACGTA | + |
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Preference number: 6 (lower is better) Translates to: SQVSPKVGGSQA*PSKVLGSPCYV Trigger: TACGTAGCAGGGTGACCCAAGAACTTTGGATGGCAATGCTTGGGAACCCCCAACCTTTGGGGACACTTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045246.8 |
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