Pregenerated sensors for PKMYT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023908Ensembl transcript IDs: ENSMUST00000024701.9
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGGGACACCCTCCGGGGCTaGGGCTGGTGCCAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QGRGGQDGQRFKSTKAGWDTLRG*GWCQPG Trigger: CCCAGGCTGGCACCAGCCCCAGCCCCGGAGGGTGTC...CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGGCGAGGATCTCCCTCCTaGGCCTCGCCAGCACCGGCT | + |
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Preference number: 4 (lower is better) Translates to: QGRGGQDGQRFKSTKAGWRGSPS*ASPAPA Trigger: AGCCGGTGCTGGCGAGGCCCAGGAGGGAGATCCTCG...CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGGAGGTGGTGTGGCCGGTaGGCCTGGAGGCTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGRGGQDGQRFKSTKAGWRWCGR*AWRLQP Trigger: TGGCTGCAGCCTCCAGGCCCACCGGCCACACCACCT...CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR GCA 90 bp | CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGGGGATGCACCAGCCCGTaGCAGAGCCAGCAGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QGRGGQDGQRFKSTKAGWGCTSP*QSQQSR Trigger: TCTGCTCTGCTGGCTCTGGCACGGGCTGGTGCATCC...CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR TCA 90 bp | CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGGTCTCCATATGAGCCATaGCCCAGGCGGCTGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QGRGGQDGQRFKSTKAGWSPYEP*PRRLSL Trigger: GAGGCTCAGCCGCCTGGGTCATGGCTCATATGGAGA...CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | TACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGACGGTCAGAGGGCAGGGGGCCGAGGTaGGAGGCTCCGACTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: YFLLDTEVSGERWARRSEGRGPR*EAPTEA Trigger: GGCCTCAGTCGGAGCCTCCCACCTCGGCCCCCTGCC...CTCTGACCGTCTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGGCAGGCTCCAGCATCATaGCGAGGACAGAACGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QGRGGQDGQRFKSTKAGWQAPAS*RGQNAA Trigger: AGCTGCGTTCTGTCCTCGCCATGATGCTGGAGCCTG...CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR GCA 90 bp | CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGGCCGCAGAGTTCTGTCTaGAGGTATAGGATGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: QGRGGQDGQRFKSTKAGWPQSSV*RYRMPP Trigger: GGGTGGCATCCTATACCTGCAGACAGAACTCTGCGG...CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR GCA 90 bp | TACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGACGGTCAGAGCAAAGTCGCCCAGCTTaGAGCGGCCCCGGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: YFLLDTEVSGERWARRSEQSRPA*SGPGGP Trigger: TGGGCCCCCGGGGCCGCTGCAAGCTGGGCGACTTTG...CTCTGACCGTCTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | TCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCGGGGGCAAGTATCCCTaGCGCAGCTGCTGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQDALLFIRHGSFRGEVGGGKYP*RSCCQP Trigger: GGGCTGGCAGCAGCTGCGCCAGGGATACTTGCCCCC...GCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | CAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGTGTGGCCGGTGGGCCTaGAGGCTGCAGCCAACTGGC | + |
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Preference number: 4 (lower is better) Translates to: QDALLFIRHGSFRGEVGKCGRWA*RLQPTG Trigger: GCCAGTTGGCTGCAGCCTCCAGGCCCACCGGCCACA...CTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | CAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGAGGTGGAGAGCCAGGTaGTGTGGCCGGTGGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QDALLFIRHGSFRGEVGKRWRAR*CGRWAW Trigger: CCAGGCCCACCGGCCACACCACCTGGCTCTCCACCT...CTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | TGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACCAGGGATGCAGCCCTTaGCAGGGGGCCGAGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: CHMSNLGCSQDALLFIRHQGCSP*QGAEVG Trigger: TCCCACCTCGGCCCCCTGCCAAGGGCTGCATCCCTG...GTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR TCA 90 bp | CAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGGGGGGAATAGACGGCTaGCAGGGATGCAGCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QDALLFIRHGSFRGEVGKGGIDG*QGCSPW Trigger: CCAAGGGCTGCATCCCTGTCAGCCGTCTATTCCCCC...CTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR GCA 90 bp | TACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGACGGTCAGAGGCTTCACAGTGTTGCTaGAGGCTGGGCCCGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: YFLLDTEVSGERWARRSEASQCC*RLGPQS Trigger: ACTCTGCGGGCCCAGCCTGCAGCAACACTGTGAAGC...CTCTGACCGTCTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | TGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGCTGTGGCTCGAAGCTaGGGGTCAGGCTCCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: CSQDALLFIRHGSFRGEVAVARS*GSGSSI Trigger: GATGCTGGAGCCTGACCCCCAGCTTCGAGCCACAGC...CACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | GTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGTGGCTGCCTCAGCATaGGTAAGGCCAACAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VPKTHYFLLDTEVSGERWVAASA*VRPTGP Trigger: AGGCCCTGTTGGCCTTACCCATGCTGAGGCAGCCAC...CCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR TCA 90 bp | CAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGCTCTGGAAGTTCTGCTaGAAGAAGGACTCGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: QDALLFIRHGSFRGEVGKLWKFC*KKDSGR Trigger: CCGGCCCGAGTCCTTCTTTCAGCAGAACTTCCAGAG...CTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR TCA 90 bp | TGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGCATGACCCAGGCGGCTaGGCCTCTGGAAGTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CSQDALLFIRHGSFRGEVHDPGG*ASGSSA Trigger: AGCAGAACTTCCAGAGGCTCAGCCGCCTGGGTCATG...CACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR TCA 90 bp | TACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGACGGTCAGAGGAAGACTTCTCCATATaGGCCATGACCCAGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: YFLLDTEVSGERWARRSEEDFSI*AMTQAA Trigger: AGCCGCCTGGGTCATGGCTCATATGGAGAAGTCTTC...CTCTGACCGTCTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR GCA 90 bp | TCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCTCATACCCAGGACTCTaGAGGGGCTCTGAGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SQDALLFIRHGSFRGEVGSYPGL*RGSEVS Trigger: TGAGACCTCAGAGCCCCTGCAGAGTCCTGGGTATGA...GCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | TGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGCCCTGCAGCAGTTCTaGGGCCATGTAGCGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: CSQDALLFIRHGSFRGEVALQQF*GHVARI Trigger: GATCCTCGCTACATGGCCCCAGAACTGCTGCAGGGC...CACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR TCA 90 bp | CAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGACTCTGCAGGGGCTCTaGGGTCTCACACAGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: QDALLFIRHGSFRGEVGKTLQGL*GLTQER Trigger: TCTTTCCTGTGTGAGACCTCAGAGCCCCTGCAGAGT...CTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR TCA 90 bp | CAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGGGTCTCTGGGGAGAGTaGGGGACCTATGCTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: QDALLFIRHGSFRGEVGKGLWGE*GTYAVI Trigger: AATGACAGCATAGGTCCCTCACTCTCCCCAGAGACC...CTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | CAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGGTGTCGGAAGTAAGCTaGAACTGGGATGGGGGTACC | + |
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Preference number: 4 (lower is better) Translates to: QDALLFIRHGSFRGEVGKVSEVS*NWDGGT Trigger: GGTACCCCCATCCCAGTTCCAGCTTACTTCCGACAC...CTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | TGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGAGTGTTGCTGCAGGCTaGGCCCGCAGAGTTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: CSQDALLFIRHGSFRGEVSVAAG*ARRVLS Trigger: AGACAGAACTCTGCGGGCCCAGCCTGCAGCAACACT...CACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | TGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGCAGCCCTCCCCACCATaGGGCAGTTCCATGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: CSQDALLFIRHGSFRGEVQPSPP*GSSMLQ Trigger: CTGTAACATGGAACTGCCCCATGGTGGGGAGGGCTG...CACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | AGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCGCTGAGGAGGTTCCTTaGCTCAAAGGTGGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SNLGCSQDALLFIRHGSFAEEVP*LKGGAG Trigger: CCCTGCCCCACCTTTGAGCCAAGGAACCTCCTCAGC...GAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR GCA 90 bp | GTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGACTGAACACATCTGCTaGTGTCCCATAAGAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VPKTHYFLLDTEVSGERWTEHIC*CPIRAL Trigger: CAGGGCTCTTATGGGACAGCAGCAGATGTGTTCAGT...CCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CCA 90 bp | AGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCCAGTCTCACGCAGTGTaGATGCTGCCCCACTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SNLGCSQDALLFIRHGSFQSHAV*MLPHFL Trigger: GAGAAAGTGGGGCAGCATCCACACTGCGTGAGACTG...GAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR TCA 90 bp | TGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGAGATGTTGGCAGGCTTaGCATCAAGGTGAACTAGGC | + |
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Preference number: 4 (lower is better) Translates to: CSQDALLFIRHGSFRGEVRCWQA*HQGELG Trigger: GCCTAGTTCACCTTGATGTCAAGCCTGCCAACATCT...CACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR TCA 90 bp | AGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGTCCTCAAACAGGCTaGGGAGGTTCCTTGGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: SNLGCSQDALLFIRHGSFSPQTG*GGSLAQ Trigger: TTGAGCCAAGGAACCTCCTCAGCCTGTTTGAGGACT...GAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR GCA 90 bp | TGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACCAGACTGAACACATCTaGTGCTGTCCCATAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: CHMSNLGCSQDALLFIRHQTEHI*CCPIRA Trigger: GGCTCTTATGGGACAGCAGCAGATGTGTTCAGTCTG...GTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR GCA 90 bp | AGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCTGTCATTATCCCAGCTaGTGGAGAGGGTGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SNLGCSQDALLFIRHGSFCHYPS*WRGCCP Trigger: TGGACAGCACCCTCTCCAGCAGCTGGGATAATGACA...GAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 90 bp | GTCCAGGAGGGGGCTGCAAGGTGGAGAGCCAGGTGGTGTGGCCGGTaGGCCTGGAGGCTGCAGCCAACTGGCAGGATGCACCAGCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: VQEGAARWRARWCGR*AWRLQPTGRMHQPV Trigger: CACGGGCTGGTGCATCCTGCCAGTTGGCTGCAGCCTCCAGGCCCACCGGCCACACCACCTGGCTCTCCACCTTGCAGCCCCCTCCTGGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 90 bp | GTTGCTGCAGGCTGGGCCCGCAGAGTTCTGTCTGCAGGTATAGGATaGCACCCTCCTCCCAGGCCCGCTCCAGTCTCACGCAGTGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: VAAGWARRVLSAGIG*HPPPRPAPVSRSVD Trigger: ATCCACACTGCGTGAGACTGGAGCGGGCCTGGGAGGAGGGTGGCATCCTATACCTGCAGACAGAACTCTGCGGGCCCAGCCTGCAGCAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 90 bp | CAGGCTTCACAGTGTTGCTGCAGGCTGGGCCCGCAGAGTTCTGTCTaGAGGTATAGGATGCCACCCTCCTCCCAGGCCCGCTCCAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: QASQCCCRLGPQSSV*RYRMPPSSQARSSL Trigger: GAGACTGGAGCGGGCCTGGGAGGAGGGTGGCATCCTATACCTGCAGACAGAACTCTGCGGGCCCAGCCTGCAGCAACACTGTGAAGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 90 bp | CTCAGCATGGGTAAGGCCAACAGGGCCTCAGCTGTGGCTCGAAGCTaGGGGTCAGGCTCCAGCATCATGGCGAGGACAGAACGCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: LSMGKANRASAVARS*GSGSSIMARTERSS Trigger: TGAGCTGCGTTCTGTCCTCGCCATGATGCTGGAGCCTGACCCCCAGCTTCGAGCCACAGCTGAGGCCCTGTTGGCCTTACCCATGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 90 bp | ACTGAACACATCTGCTGCTGTCCCATAAGAGCCCTGCAGCAGTTCTaGGGCCATGTAGCGAGGATCTCCCTCCTGGGCCTCGCCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: TEHICCCPIRALQQF*GHVARISLLGLAST Trigger: GGTGCTGGCGAGGCCCAGGAGGGAGATCCTCGCTACATGGCCCCAGAACTGCTGCAGGGCTCTTATGGGACAGCAGCAGATGTGTTCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS TCA 90 bp | CCAGCTTGCAGCGGCCCCGGGGGCCCAAGAAGATGTTGGCAGGCTTaGCATCAAGGTGAACTAGGCCTTGACTATGTAGATGGTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: PACSGPGGPRRCWQA*HQGELGLDYVDGPE Trigger: CTCTGGACCATCTACATAGTCAAGGCCTAGTTCACCTTGATGTCAAGCCTGCCAACATCTTCTTGGGCCCCCGGGGCCGCTGCAAGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CAA 90 bp | TCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCACAGGGATGCAGCCCTaGGCAGGGGGCCGAGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: SQDALLFIRHGSFRGEVGTGMQP*AGGRGG Trigger: CCCACCTCGGCCCCCTGCCAAGGGCTGCATCCCTGT...GCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CAA 90 bp | TGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACCCAAAGTCGCCCAGCTaGCAGCGGCCCCGGGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: CHMSNLGCSQDALLFIRHPKSPS*QRPRGP Trigger: GGGCCCCCGGGGCCGCTGCAAGCTGGGCGACTTTGG...GTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS TCA 90 bp | AGAGGTTCTTCTAGTGATCCGGGACAGGACGGTCTCTGGGGAGAGTaGGGGACCTATGCTGTCATTATCCCAGCTGCTGGAGAGGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: RGSSSDPGQDGLWGE*GTYAVIIPAAGEGA Trigger: AGCACCCTCTCCAGCAGCTGGGATAATGACAGCATAGGTCCCTCACTCTCCCCAGAGACCGTCCTGTCCCGGATCACTAGAAGAACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 90 bp | ACAGGCCACTTCCAAGATGGTGAGACCCAGACTGAACACATCTGCTaGTGTCCCATAAGAGCCCTGCAGCAGTTCTGGGGCCATGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: TGHFQDGETQTEHIC*CPIRALQQFWGHVA Trigger: CGCTACATGGCCCCAGAACTGCTGCAGGGCTCTTATGGGACAGCAGCAGATGTGTTCAGTCTGGGTCTCACCATCTTGGAAGTGGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS TCA 90 bp | GAGTCGCCCATCTTCCTTAGAGCGCACCTTGAAGACTTCTCCATATaGGCCATGACCCAGGCGGCTGAGCCTCTGGAAGTTCTGCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: ESPIFLRAHLEDFSI*AMTQAAEPLEVLLK Trigger: TTTCAGCAGAACTTCCAGAGGCTCAGCCGCCTGGGTCATGGCTCATATGGAGAAGTCTTCAAGGTGCGCTCTAAGGAAGATGGGCGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 90 bp | GTTACAGGCCACTTCCAAGATGGTGAGACCCAGACTGAACACATCTaGTGCTGTCCCATAAGAGCCCTGCAGCAGTTCTGGGGCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: VTGHFQDGETQTEHI*CCPIRALQQFWGHV Trigger: TACATGGCCCCAGAACTGCTGCAGGGCTCTTATGGGACAGCAGCAGATGTGTTCAGTCTGGGTCTCACCATCTTGGAAGTGGCCTGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CAA 90 bp | TCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAGGCCCCCAGGCCTTTaGAGGGAGAAACCAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SQDALLFIRHGSFRGEVGRPPGL*REKPGS Trigger: AGAGCCTGGTTTCTCCCTCAAAAGGCCTGGGGGCCT...GCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CAA 90 bp | AGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCCCAGGCTTCACAGTGTaGCTGCAGGCTGGGCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: SNLGCSQDALLFIRHGSFPGFTV*LQAGPA Trigger: TGCGGGCCCAGCCTGCAGCAACACTGTGAAGCCTGG...GAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CAA 90 bp | CAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGTGGGGCAGGGACCTCTaGGAGGCTCTGAGTCCACAT | + |
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Preference number: 5 (lower is better) Translates to: QDALLFIRHGSFRGEVGKWGRDL*EALSPH Trigger: ATGTGGACTCAGAGCCTCCAAGAGGTCCCTGCCCCA...CTTGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS-3UTR CAA 90 bp | TGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGTGGGGCCCAAGAAGATGTaGGCAGGCTTGACATCAAGG | + |
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Preference number: 5 (lower is better) Translates to: CSQDALLFIRHGSFRGEVGPKKM*AGLTSR Trigger: CCTTGATGTCAAGCCTGCCAACATCTTCTTGGGCCC...CACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 72 bp | CCAGGAGGGGGCTGCAAGGTGGAGAGCCAGGTGGTGTaGCCGGTGGGCCTGGAGGCTGCAGCCAACTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PGGGCKVESQVV*PVGLEAAANWQ Trigger: CTGCCAGTTGGCTGCAGCCTCCAGGCCCACCGGCCACACCACCTGGCTCTCCACCTTGCAGCCCCCTCCTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 72 bp | GGGGCTGCAAGGTGGAGAGCCAGGTGGTGTGGCCGGTaGGCCTGGAGGCTGCAGCCAACTGGCAGGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: GAARWRARWCGR*AWRLQPTGRMH Trigger: GTGCATCCTGCCAGTTGGCTGCAGCCTCCAGGCCCACCGGCCACACCACCTGGCTCTCCACCTTGCAGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS TCA 72 bp | CCGGCTCGGGTCATACCCAGGACTCTGCAGGGGCTCTaGGGTCTCACACAGGAAAGACACCCTCCGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PARVIPRTLQGL*GLTQERHPPGL Trigger: CAGCCCCGGAGGGTGTCTTTCCTGTGTGAGACCTCAGAGCCCCTGCAGAGTCCTGGGTATGACCCGAGCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 72 bp | CAGTGTTGCTGCAGGCTGGGCCCGCAGAGTTCTGTCTaGAGGTATAGGATGCCACCCTCCTCCCAGGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: QCCCRLGPQSSV*RYRMPPSSQAR Trigger: GCGGGCCTGGGAGGAGGGTGGCATCCTATACCTGCAGACAGAACTCTGCGGGCCCAGCCTGCAGCAACACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CAA 90 bp | GCACCGGCTGAACCCAGCTCCACCAGTAGTCCAAAGTCGCCCAGCTaGCAGCGGCCCCGGGGGCCCAAGAAGATGTTGGCAGGCTTGACA | + |
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Preference number: 6 (lower is better) Translates to: APAEPSSTSSPKSPS*QRPRGPKKMLAGLT Trigger: TGTCAAGCCTGCCAACATCTTCTTGGGCCCCCGGGGCCGCTGCAAGCTGGGCGACTTTGGACTACTGGTGGAGCTGGGTTCAGCCGGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CAA 72 bp | GAACCCAGCTCCACCAGTAGTCCAAAGTCGCCCAGCTaGCAGCGGCCCCGGGGGCCCAAGAAGATGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: EPSSTSSPKSPS*QRPRGPKKMLA Trigger: TGCCAACATCTTCTTGGGCCCCCGGGGCCGCTGCAAGCTGGGCGACTTTGGACTACTGGTGGAGCTGGGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 72 bp | AAGGACTCGGGCCGGCTCGGGTCATACCCAGGACTCTaGAGGGGCTCTGAGGTCTCACACAGGAAAGACACC | + |
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Preference number: 6 (lower is better) Translates to: KDSGRLGSYPGL*RGSEVSHRKDT Trigger: GGTGTCTTTCCTGTGTGAGACCTCAGAGCCCCTGCAGAGTCCTGGGTATGACCCGAGCCGGCCCGAGTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 72 bp | TCCCAGGCCCGCTCCAGTCTCACGCAGTGTGGATGCTaGCCCACTTTCTCATGGCCACCTACCTCAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SQARSSLTQCGC*PTFSWPPTSAS Trigger: ACTGGCTGAGGTAGGTGGCCATGAGAAAGTGGGGCAGCATCCACACTGCGTGAGACTGGAGCGGGCCTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 72 bp | GGTAAGGCCAACAGGGCCTCAGCTGTGGCTCGAAGCTaGGGGTCAGGCTCCAGCATCATGGCGAGGACAGAA | + |
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Preference number: 6 (lower is better) Translates to: GKANRASAVARS*GSGSSIMARTE Trigger: TTCTGTCCTCGCCATGATGCTGGAGCCTGACCCCCAGCTTCGAGCCACAGCTGAGGCCCTGTTGGCCTTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 72 bp | ATCTGCTGCTGTCCCATAAGAGCCCTGCAGCAGTTCTaGGGCCATGTAGCGAGGATCTCCCTCCTGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: ICCCPIRALQQF*GHVARISLLGL Trigger: GAGGCCCAGGAGGGAGATCCTCGCTACATGGCCCCAGAACTGCTGCAGGGCTCTTATGGGACAGCAGCAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 72 bp | CTGTGGCTCGAAGCTGGGGGTCAGGCTCCAGCATCATaGCGAGGACAGAACGCAGCTCAGAAGACAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: LWLEAGGQAPAS*RGQNAAQKTDQ Trigger: CTGGTCTGTCTTCTGAGCTGCGTTCTGTCCTCGCCATGATGCTGGAGCCTGACCCCCAGCTTCGAGCCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 72 bp | GGGACAGGACGGTCTCTGGGGAGAGTGAGGGACCTATaGTGTCATTATCCCAGCTGCTGGAGAGGGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GTGRSLGRVRDL*CHYPSCWRGCC Trigger: ACAGCACCCTCTCCAGCAGCTGGGATAATGACAGCATAGGTCCCTCACTCTCCCCAGAGACCGTCCTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 72 bp | ACCACAGAACATTCCAGGGACGTGGCTGCCTCAGCATaGGTAAGGCCAACAGGGCCTCAGCTGTGGCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: TTEHSRDVAASA*VRPTGPQLWLE Trigger: TTCGAGCCACAGCTGAGGCCCTGTTGGCCTTACCCATGCTGAGGCAGCCACGTCCCTGGAATGTTCTGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 72 bp | GCAGCCATATACCACAGAACATTCCAGGGACGTGGCTaGCTCAGCATGGGTAAGGCCAACAGGGCCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AAIYHRTFQGRG*LSMGKANRASA Trigger: AGCTGAGGCCCTGTTGGCCTTACCCATGCTGAGGCAGCCACGTCCCTGGAATGTTCTGTGGTATATGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS TCA 72 bp | TCTAGTGATCCGGGACAGGACGGTCTCTGGGGAGAGTaGGGGACCTATGCTGTCATTATCCCAGCTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SSDPGQDGLWGE*GTYAVIIPAAG Trigger: TCCAGCAGCTGGGATAATGACAGCATAGGTCCCTCACTCTCCCCAGAGACCGTCCTGTCCCGGATCACTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 72 bp | TTCCAAGATGGTGAGACCCAGACTGAACACATCTGCTaGTGTCCCATAAGAGCCCTGCAGCAGTTCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: FQDGETQTEHIC*CPIRALQQFWG Trigger: GCCCCAGAACTGCTGCAGGGCTCTTATGGGACAGCAGCAGATGTGTTCAGTCTGGGTCTCACCATCTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS CCA 72 bp | AGTCTCACGCAGTGTGGATGCTGCCCCACTTTCTCATaGCCACCTACCTCAGCCAGTTTACGAGTTCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLTQCGCCPTFS*PPTSASLRVRS Trigger: AGACCGAACTCGTAAACTGGCTGAGGTAGGTGGCCATGAGAAAGTGGGGCAGCATCCACACTGCGTGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS GCA 72 bp | CACTTCCAAGATGGTGAGACCCAGACTGAACACATCTaGTGCTGTCCCATAAGAGCCCTGCAGCAGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: HFQDGETQTEHI*CCPIRALQQFW Trigger: CCAGAACTGCTGCAGGGCTCTTATGGGACAGCAGCAGATGTGTTCAGTCTGGGTCTCACCATCTTGGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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| CDS TCA 72 bp | ATCTTCCTTAGAGCGCACCTTGAAGACTTCTCCATATaGGCCATGACCCAGGCGGCTGAGCCTCTGGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: IFLRAHLEDFSI*AMTQAAEPLEV Trigger: AACTTCCAGAGGCTCAGCCGCCTGGGTCATGGCTCATATGGAGAAGTCTTCAAGGTGCGCTCTAAGGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024701.9 |
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