Pregenerated sensors for PKLR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041237Ensembl transcript IDs: ENSMUST00000047111.13, ENSMUST00000107482.10, ENSMUST00000127058.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGTGGCCGGTGCGTAATTGGACCCAGACATTCAGGGCCTGTGTaGAGTACCAGACTGTGGCTAGATGGCAGATGTGGGACTATGGGA | + |
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Preference number: 1 (lower is better) Translates to: LGGRCVIGPRHSGPV*STRLWLDGRCGTMG Trigger: TCCCATAGTCCCACATCTGCCATCTAGCCACAGTCTGGTACTTCACACAGGCCCTGAATGTCTGGGTCCAATTACGCACCGGCCACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR CCA 90 bp | CAGCTGAGCGGATTGAGACAGGGATATACGACTGATGCTGCTGGGTaGCCGGTGCGTAATTGGACCCAGACATTCAGGGCCTGTGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: QLSGLRQGYTTDAAG*PVRNWTQTFRACVK Trigger: CTTCACACAGGCCCTGAATGTCTGGGTCCAATTACGCACCGGCCACCCAGCAGCATCAGTCGTATATCCCTGTCTCAATCCGCTCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR CCA 90 bp | AGACAGGGATATACGACTGATGCTGCTGGGTGGCCGGTGCGTAATTaGACCCAGACATTCAGGGCCTGTGTGAAGTACCAGACTGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: RQGYTTDAAGWPVRN*TQTFRACVKYQTVA Trigger: AGCCACAGTCTGGTACTTCACACAGGCCCTGAATGTCTGGGTCCAATTACGCACCGGCCACCCAGCAGCATCAGTCGTATATCCCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR CCA 90 bp | CCCCGTTCTAATTATCAGGACCCAGGAGGAATCGAATTAACCAGCTaGGCTGGGATTAAAGGCTCAGGGCATCTTAGAGTCCAGCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: PRSNYQDPGGIELTS*AGIKGSGHLRVQLS Trigger: GCTCAGCTGGACTCTAAGATGCCCTGAGCCTTTAATCCCAGCCCAGCTGGTTAATTCGATTCCTCCTGGGTCCTGATAATTAGAACGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR CAA 90 bp | GCTGGGATTAAAGGCTCAGGGCATCTTAGAGTCCAGCTGAGCGGATaGAGACAGGGATATACGACTGATGCTGCTGGGTGGCCGGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: AGIKGSGHLRVQLSG*RQGYTTDAAGWPVR Trigger: ACGCACCGGCCACCCAGCAGCATCAGTCGTATATCCCTGTCTCAATCCGCTCAGCTGGACTCTAAGATGCCCTGAGCCTTTAATCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR TCA 90 bp | GACTACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGAGGGGTGTGGGTTaGAAGAAATGGGGTGCAACT | + |
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Preference number: 2 (lower is better) Translates to: DYLKSSWSLMPAVLTPSGGRGVG*KKWGAT Trigger: AGTTGCACCCCATTTCTTTCAACCCACACCCCTCCC...TCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CCA 90 bp | TACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGGGATTTCTAGGAGTCTaGGGCCAGTCAGAGCTATAC | + |
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Preference number: 2 (lower is better) Translates to: YLKSSWSLMPAVLTPSGGGFLGV*GQSELY Trigger: GTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCC...CCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTCGTAAGCTCGGCTCCATGGTTTGTGGAGTCAGTAAGAAAGTAAGACTATGGCCGGTGCGTAATTaGACCCAGACATTCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VARKLGSMVCGVSKKVRLWPVRN*TQTFRA Trigger: GGCCCTGAATGTCTGGGTCCAATTACGCACCGGCCA...TAGTCTTACTTTCTTACTGACTCCACAAACCATGGAGCCGAGCTTACGAGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCATGGCCGGTGCGTAATTaGACCCAGACATTCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLICMWGQSGCGRISSDPWPVRN*TQTFRA Trigger: GGCCCTGAATGTCTGGGTCCAATTACGCACCGGCCA...TGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTTACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGAAGTACACTGTAGCATaGGGCCAGGACCACACAACT | + |
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Preference number: 2 (lower is better) Translates to: WVYCCEEEGGLEYPILGRKYTVA*GQDHTT Trigger: AGTTGTGTGGTCCTGGCCCCATGCTACAGTGTACTT...CCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTAAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR TCA 90 bp | GGAACATCTTTGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGGGGAGGGGTGTGGGTTaGAAGAAATGGGGTGCAACT | + |
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Preference number: 2 (lower is better) Translates to: GTSLWSLHNAICSNTQILGRGVG*KKWGAT Trigger: AGTTGCACCCCATTTCTTTCAACCCACACCCCTCCC...CAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACAAAGATGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTCGTAAGCTCGGCTCCATGGTTTGTGGAGTCAGTAAGAAAGTAAGACTAACTATGGGAGGGGTGTaGGTTGAAAGAAATGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VARKLGSMVCGVSKKVRLTMGGV*VERNGV Trigger: CACCCCATTTCTTTCAACCCACACCCCTCCCATAGT...TAGTCTTACTTTCTTACTGACTCCACAAACCATGGAGCCGAGCTTACGAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CCA 90 bp | GAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCATCGAATTAACCAGCTaGGCTGGGATTAAAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: EFHLTQQISGQENSQISGIELTS*AGIKGS Trigger: TGAGCCTTTAATCCCAGCCCAGCTGGTTAATTCGAT...GCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CCA 90 bp | TACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTTGTTCTATGGAATTTaGATAAGTTTACCCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: YLKSSWSLMPAVLTPSGGLFYGI*ISLPSL Trigger: GAGACTGGGTAAACTTATCCAAATTCCATAGAACAA...CCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTTACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGTATGTGGGGACAAAGTaGTTGTGGAAGAATTTCATC | + |
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Preference number: 2 (lower is better) Translates to: WVYCCEEEGGLEYPILGRYVGTK*LWKNFI Trigger: GATGAAATTCTTCCACAACCACTTTGTCCCCACATA...CCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTAAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CCA 90 bp | GGAACATCTTTGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGACACAACTCTTTGGGTaGGAGAGTCTGGGATTCTTT | + |
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Preference number: 2 (lower is better) Translates to: GTSLWSLHNAICSNTQILTQLFG*ESLGFF Trigger: AAAGAATCCCAGACTCTCCCACCCAAAGAGTTGTGT...CAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACAAAGATGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
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| 3UTR-3UTR CAA 90 bp | CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTCGTATTCTACCCTGACTaGAGGCCATCAGGAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: PKVQLVTHACSPYPLRRVVFYPD*RPSGGD Trigger: GTCACCTCCTGATGGCCTCAAGTCAGGGTAGAATAC...GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR GCA 72 bp | GTAAGACTACCTAAAGTCCAGCTGGTCACTCATGCCTaGAGTCCTTACCCCCTCAGGAGGGTCAGGCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: VRLPKVQLVTHA*SPYPLRRVRQE Trigger: CTCCTGCCTGACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTAGTCTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR TCA 72 bp | CGGTGCGTAATTGGACCCAGACATTCAGGGCCTGTGTaGAGTACCAGACTGTGGCTAGATGGCAGATGTGGG | + |
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Preference number: 3 (lower is better) Translates to: RCVIGPRHSGPV*STRLWLDGRCG Trigger: CCCACATCTGCCATCTAGCCACAGTCTGGTACTTCACACAGGCCCTGAATGTCTGGGTCCAATTACGCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR CCA 72 bp | TATACGACTGATGCTGCTGGGTGGCCGGTGCGTAATTaGACCCAGACATTCAGGGCCTGTGTGAAGTACCAG | + |
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Preference number: 3 (lower is better) Translates to: YTTDAAGWPVRN*TQTFRACVKYQ Trigger: CTGGTACTTCACACAGGCCCTGAATGTCTGGGTCCAATTACGCACCGGCCACCCAGCAGCATCAGTCGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CAA 90 bp | AGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCTCGTAAGCTCGGCTCCGTATTCTACCCTGACTaGAGGCCATCAGGAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SRSVGKRTARLVARKLGSVFYPD*RPSGGD Trigger: GTCACCTCCTGATGGCCTCAAGTCAGGGTAGAATAC...GGAGCCGAGCTTACGAGCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CAA 90 bp | GCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATGAGACCTTGTGGGAGGGGTGTGGGTaGAAAGAAATGGGGTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: AGGFLGVWGQSELYNETLWEGCG*KEMGCN Trigger: GTTGCACCCCATTTCTTTCAACCCACACCCCTCCCA...CAAGGTCTCATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR CCA 72 bp | CCTCAGGAGGGTCAGGCAGGAGGATTTCTAGGAGTCTaGGGCCAGTCAGAGCTATACAATGAGACCTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: PQEGQAGGFLGV*GQSELYNETLY Trigger: ATACAAGGTCTCATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACCCTCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR-3UTR CAA 90 bp | GTGGCTCGTAAGCTCGGCTCCATGGTTTGTGGAGTCAGTAAGAAAGTAAGACTATGGGAGGGGTGTGGGTaGAAAGAAATGGGGTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: VARKLGSMVCGVSKKVRLWEGCG*KEMGCN Trigger: GTTGCACCCCATTTCTTTCAACCCACACCCCTCCCA...TAGTCTTACTTTCTTACTGACTCCACAAACCATGGAGCCGAGCTTACGAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR GCA 72 bp | AGGGGCCTGGGGAACATCTTTGTGGTCCTTGCACAATaGCATCTGCAGCAATACTCAAATTCTGTGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: RGLGNIFVVLAQ*HLQQYSNSVMR Trigger: CCTCATCACAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACAAAGATGTTCCCCAGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
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| 3UTR TCA 72 bp | TATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTaGCCCAGCAGATCAGTGGGCAAGAGAACAGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: YVGTKWLWKNFI*PSRSVGKRTAR Trigger: TCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR CCA 72 bp | AATTATCAGGACCCAGGAGGAATCGAATTAACCAGCTaGGCTGGGATTAAAGGCTCAGGGCATCTTAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: NYQDPGGIELTS*AGIKGSGHLRV Trigger: GACTCTAAGATGCCCTGAGCCTTTAATCCCAGCCCAGCTGGTTAATTCGATTCCTCCTGGGTCCTGATAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | GCCCACCCGCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCAGCGGTCCACAGAGCGTaGCGCCGGCCCGATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AHPLCSPSEVHCSMGPGPAVHRA*RRPDGG Trigger: GCCACCATCGGGCCGGCGTCACGCTCTGTGGACCGC...TGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCGGGTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | GGGATTAAAGGCTCAGGGCATCTTAGAGTCCAGCTGAGCGGATTGAGACAGGGAGCGGTCCACAGAGCGTaGCGCCGGCCCGATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GIKGSGHLRVQLSGLRQGAVHRA*RRPDGG Trigger: GCCACCATCGGGCCGGCGTCACGCTCTGTGGACCGC...TCCCTGTCTCAATCCGCTCAGCTGGACTCTAAGATGCCCTGAGCCTTTAATCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GCCCACCCGCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCAAGCTCCTGGGTCAGCTaGGCCACACTGGCACGTCTC | + |
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Preference number: 4 (lower is better) Translates to: AHPLCSPSEVHCSMGPGPSSWVS*ATLARL Trigger: GAGACGTGCCAGTGTGGCCCAGCTGACCCAGGAGCT...TGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCGGGTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTCACGTCTCAGGTATCCTaGTGGCCCTCCTGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PKVQLVTHACSPYPLRRVTSQVS*WPSWSP Trigger: GGGGCTCCAGGAGGGCCAGCAGGATACCTGAGACGT...GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047111.13 |
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| CDS-3UTR GCA 90 bp | GCCCACCCGCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCAGCTGCGGGCAGTTGCTaGTGCTGGAAGAAGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AHPLCSPSEVHCSMGPGPAAGSC*CWKKAV Trigger: CACTGCCTTCTTCCAGCAGCAGCAACTGCCCGCAGC...TGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCGGGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTCCTCCACGGCTCCAATTaGAGTGACCTCGGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PKVQLVTHACSPYPLRRVLHGSN*SDLGWV Trigger: GACCCAACCGAGGTCACTGCAATTGGAGCCGTGGAG...GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GCCCACCCGCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCAGCGATGGACTCTGCATaGTACTCATGGGAGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: AHPLCSPSEVHCSMGPGPAMDSA*YSWEPW Trigger: CCATGGCTCCCATGAGTACCATGCAGAGTCCATCGC...TGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCGGGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | GGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATGAGCTGCGGCACAGCACTTaGAGGAAGCCTCCACGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GQAGGFLGVWGQSELYNELRHST*RKPPRL Trigger: GAGCCGTGGAGGCTTCCTTCAAGTGCTGTGCCGCAG...CTCATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | AGCACCCATCTACCCCAGCCTTCCCTAAAGTGTGGAGCTGTGCTCCCTGAAGGAAACGAGTCACAGCAATaGCAGCAGCCCGAGGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: STHLPQPSLKCGAVLPEGNESQQ*QQPEVG Trigger: ACCGACCTCGGGCTGCTGTCATTGCTGTGACTCGTT...TCCTTCAGGGAGCACAGCTCCACACTTTAGGGAAGGCTGGGGTAGATGGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | AGCACCCATCTACCCCAGCCTTCCCTAAAGTGTGGAGCTGTGCTCCCTGAAGGACTCCACGGCTCCAATTaGAGTGACCTCGGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: STHLPQPSLKCGAVLPEGLHGSN*SDLGWV Trigger: GACCCAACCGAGGTCACTGCAATTGGAGCCGTGGAG...TCCTTCAGGGAGCACAGCTCCACACTTTAGGGAAGGCTGGGGTAGATGGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GACTACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGTATCTCGGGACCCTTaGTGTCCAGGGCGATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: DYLKSSWSLMPAVLTPSGVSRDP*CPGRWP Trigger: TGGCCATCGCCCTGGACACCAAGGGTCCCGAGATAC...TCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | GGGATTAAAGGCTCAGGGCATCTTAGAGTCCAGCTGAGCGGATTGAGACAGGGACCACGGGTCTGTAGCTaGGTGGGGAGGTTGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GIKGSGHLRVQLSGLRQGPRVCS*VGRLQS Trigger: GCTTTGCAACCTCCCCACTCAGCTACAGACCCGTGG...TCCCTGTCTCAATCCGCTCAGCTGGACTCTAAGATGCCCTGAGCCTTTAATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | AGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCTCGTAAGCTCGGCTCCCTGCTGGGATCTCAATaGCAAGGTCACCCCGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRSVGKRTARLVARKLGSLLGSQ*QGHPEP Trigger: TGGCTCGGGGTGACCTTGGCATTGAGATCCCAGCAG...GGAGCCGAGCTTACGAGCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GGGACTATGGGAGGGGTGTGGGTTGAAAGAAATGGGGTGCAACTAGGTCAGAAAAGCTCCTGGGTCAGCTaGGCCACACTGGCACGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GTMGGVWVERNGVQLGQKSSWVS*ATLARL Trigger: GAGACGTGCCAGTGTGGCCCAGCTGACCCAGGAGCT...TTTCTGACCTAGTTGCACCCCATTTCTTTCAACCCACACCCCTCCCATAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | AGACTACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGCCGCCTCCCGAATGTTaGCGATGGACTCTGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: RLPKVQLVTHACSPYPLRPPPEC*RWTLHG Trigger: ACCATGCAGAGTCCATCGCCAACATTCGGGAGGCGG...CCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | TTAGTTCTCTCCAGCACCCATCTACCCCAGCCTTCCCTAAAGTGTGGAGCTGTGAACGAGTCACAGCAATaGCAGCAGCCCGAGGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: LVLSSTHLPQPSLKCGAVNESQQ*QQPEVG Trigger: ACCGACCTCGGGCTGCTGTCATTGCTGTGACTCGTT...CACAGCTCCACACTTTAGGGAAGGCTGGGGTAGATGGGTGCTGGAGAGAACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCGGTGTCCGCCATAGCTaGGGGCAGTTGCTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EFHLTQQISGQENSQISGGVRHS*GQLLLL Trigger: CAGCAGCAGCAACTGCCCGCAGCTATGGCGGACACC...GCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GTGGCTCGTAAGCTCGGCTCCATGGTTTGTGGAGTCAGTAAGAAAGTAAGACTAACTCCTCGGGACAGGTaGACCTGTCGGGCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VARKLGSMVCGVSKKVRLTPRDR*TCRAAW Trigger: CCAGGCTGCCCGACAGGTCCACCTGTCCCGAGGAGT...TAGTCTTACTTTCTTACTGACTCCACAAACCATGGAGCCGAGCTTACGAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GTGCGTAATTGGACCCAGACATTCAGGGCCTGTGTGAAGTACCAGACTGTGGCTTGCCCAGACAGCCTCTaGAGGCTCACGGTAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VRNWTQTFRACVKYQTVACPDSL*RLTVEQ Trigger: TTGCTCTACCGTGAGCCTCCAGAGGCTGTCTGGGCA...AGCCACAGTCTGGTACTTCACACAGGCCCTGAATGTCTGGGTCCAATTACGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| 3UTR CAA 72 bp | GTACACTGTAGCATGGGGCCAGGACCACACAACTCTTaGGGTGGGAGAGTCTGGGATTCTTTGCCTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHCSMGPGPHNS*GGRVWDSLPVG Trigger: TCCCACAGGCAAAGAATCCCAGACTCTCCCACCCAAAGAGTTGTGTGGTCCTGGCCCCATGCTACAGTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | TACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGAGTCACCAGCACCTGTaGACCCTTCACAATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLKSSWSLMPAVLTPSGGSHQHL*TLHNFH Trigger: GTGGAAATTGTGAAGGGTTCACAGGTGCTGGTGACT...CCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | AGACTACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGGCACCACTAAGGAGATaGGCCCGTCGTCAATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLPKVQLVTHACSPYPLRAPLRR*ARRQCR Trigger: TCTACATTGACGACGGGCTCATCTCCTTAGTGGTGC...CCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | AGACTACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGTCTTTGTCAGCACAATaGTGGCTGCGGCACAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RLPKVQLVTHACSPYPLRSLSAQ*WLRHST Trigger: AGTGCTGTGCCGCAGCCATCATTGTGCTGACAAAGA...CCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCGCTGCGGGCAGTTGCTaGTGCTGGAAGAAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EFHLTQQISGQENSQISGAAGSC*CWKKAV Trigger: CACTGCCTTCTTCCAGCAGCAGCAACTGCCCGCAGC...GCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATGAGGTTGGCGATGGACTCTaGATGGTACTCATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQAGGFLGVWGQSELYNEVGDGL*MVLMGA Trigger: GGCTCCCATGAGTACCATGCAGAGTCCATCGCCAAC...CTCATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGGTACACAGCGGCCTCTaGCTCCCGGGCAATCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: DKVVVEEFHLTQQISGQEVHSGL*LPGNRM Trigger: CATGCGATTGCCCGGGAGGCAGAGGCCGCTGTGTAC...CTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCTCGTAAGCTCGGCTCCCAGCACAATGATGGCTaGGGCACAGCACTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRSVGKRTARLVARKLGSQHNDG*GTALEG Trigger: TCCTTCAAGTGCTGTGCCGCAGCCATCATTGTGCTG...GGAGCCGAGCTTACGAGCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | TTTACCCAGTCTCCACTCCCCCGTTCTAATTATCAGGACCCAGGAGGAATCGAATCTCAGGTATCCTGCTaGCCCTCCTGGAGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FTQSPLPRSNYQDPGGIESQVSC*PSWSPT Trigger: AGTGGGGCTCCAGGAGGGCCAGCAGGATACCTGAGA...TTCGATTCCTCCTGGGTCCTGATAATTAGAACGGGGGAGTGGAGACTGGGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047111.13 |
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| CDS-3UTR CCA 90 bp | TGGGTTTACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTATCTCGGGACCCTTaGTGTCCAGGGCGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVYCCEEEGGLEYPILGRVSRDP*CPGRWP Trigger: TGGCCATCGCCCTGGACACCAAGGGTCCCGAGATAC...CCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTAAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | AGCACCCATCTACCCCAGCCTTCCCTAAAGTGTGGAGCTGTGCTCCCTGAAGGACTGCCACCACATCACTaGCTTTTCGTACAAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: STHLPQPSLKCGAVLPEGLPPHH*LFVQRR Trigger: CCTCCTTTGTACGAAAAGCCAGTGATGTGGTGGCAG...TCCTTCAGGGAGCACAGCTCCACACTTTAGGGAAGGCTGGGGTAGATGGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | TGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGTGATGAGGTGACTCCTCGGGACAGGTaGACCTGTCGGGCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGPCTMPSAAILKFCDEVTPRDR*TCRAAW Trigger: CCAGGCTGCCCGACAGGTCCACCTGTCCCGAGGAGT...CACCTCATCACAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
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| 3UTR CAA 72 bp | AAAGGCTCAGGGCATCTTAGAGTCCAGCTGAGCGGATaGAGACAGGGATATACGACTGATGCTGCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGSGHLRVQLSG*RQGYTTDAAGW Trigger: CCACCCAGCAGCATCAGTCGTATATCCCTGTCTCAATCCGCTCAGCTGGACTCTAAGATGCCCTGAGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | GACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGCCACGGGTCTGTAGCTaGGTGGGGAGGTTGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKVVVEEFHLTQQISGQEPRVCS*VGRLQS Trigger: GCTTTGCAACCTCCCCACTCAGCTACAGACCCGTGG...CTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | TGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGTGATGAGGTGGGTGTCCGCCATAGCTaGGGGCAGTTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CGPCTMPSAAILKFCDEVGVRHS*GQLLLL Trigger: CAGCAGCAGCAACTGCCCGCAGCTATGGCGGACACC...CACCTCATCACAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
||
| CDS-3UTR GCA 90 bp | TGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGTGATGAGGTGGTACACAGCGGCCTCTaGCTCCCGGGCAATCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CGPCTMPSAAILKFCDEVVHSGL*LPGNRM Trigger: CATGCGATTGCCCGGGAGGCAGAGGCCGCTGTGTAC...CACCTCATCACAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GTGCGTAATTGGACCCAGACATTCAGGGCCTGTGTGAAGTACCAGACTGTGGCTCAGCACAATGATGGCTaGGGCACAGCACTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRNWTQTFRACVKYQTVAQHNDG*GTALEG Trigger: TCCTTCAAGTGCTGTGCCGCAGCCATCATTGTGCTG...AGCCACAGTCTGGTACTTCACACAGGCCCTGAATGTCTGGGTCCAATTACGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | TATCAGGACCCAGGAGGAATCGAATTAACCAGCTGGGCTGGGATTAAAGGCTCACCGCCTCCCGAATGTTaGCGATGGACTCTGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: YQDPGGIELTSWAGIKGSPPPEC*RWTLHG Trigger: ACCATGCAGAGTCCATCGCCAACATTCGGGAGGCGG...TGAGCCTTTAATCCCAGCCCAGCTGGTTAATTCGATTCCTCCTGGGTCCTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATGAGACCTTGCATCCAGCACAGCATTaGCCACATCGCTTGTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGGFLGVWGQSELYNETLHPAQH*PHRLSP Trigger: CGGAGACAAGCGATGTGGCCAATGCTGTGCTGGATG...CAAGGTCTCATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | TATCAGGACCCAGGAGGAATCGAATTAACCAGCTGGGCTGGGATTAAAGGCTCAAGCTCCTCAAACAACTaGCGGTGGTACACAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YQDPGGIELTSWAGIKGSSSSNN*RWYTAA Trigger: GGCCGCTGTGTACCACCGCCAGTTGTTTGAGGAGCT...TGAGCCTTTAATCCCAGCCCAGCTGGTTAATTCGATTCCTCCTGGGTCCTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCAGCTCCTCAAACAACTaGCGGTGGTACACAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EFHLTQQISGQENSQISGSSSNN*RWYTAA Trigger: GGCCGCTGTGTACCACCGCCAGTTGTTTGAGGAGCT...GCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | TTTACCCAGTCTCCACTCCCCCGTTCTAATTATCAGGACCCAGGAGGAATCGAATGCCCAGACAGCCTCTaGAGGCTCACGGTAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTQSPLPRSNYQDPGGIECPDSL*RLTVEQ Trigger: TTGCTCTACCGTGAGCCTCCAGAGGCTGTCTGGGCA...TTCGATTCCTCCTGGGTCCTGATAATTAGAACGGGGGAGTGGAGACTGGGTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | GAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCAGACAGAAGCTGAGCTaGGCGGCCAGTCTTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFHLTQQISGQENSQISGRQKLS*AASLCQ Trigger: CTGACAAAGACTGGCCGCTCAGCTCAGCTTCTGTCT...GCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | TTTACCCAGTCTCCACTCCCCCGTTCTAATTATCAGGACCCAGGAGGAATCGAAAGACAGAAGCTGAGCTaGGCGGCCAGTCTTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTQSPLPRSNYQDPGGIERQKLS*AASLCQ Trigger: CTGACAAAGACTGGCCGCTCAGCTCAGCTTCTGTCT...TTCGATTCCTCCTGGGTCCTGATAATTAGAACGGGGGAGTGGAGACTGGGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATGAGATGATGTCCACATTATaGTCCACCCCGAAGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQAGGFLGVWGQSELYNEMMSTL*STPKRR Trigger: TCTGCGCTTCGGGGTGGAGCATAATGTGGACATCAT...CTCATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GTGGCTCGTAAGCTCGGCTCCATGGTTTGTGGAGTCAGTAAGAAAGTAAGACTACTGCTGGGATCTCAATaGCAAGGTCACCCCGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VARKLGSMVCGVSKKVRLLLGSQ*QGHPEP Trigger: TGGCTCGGGGTGACCTTGGCATTGAGATCCCAGCAG...TAGTCTTACTTTCTTACTGACTCCACAAACCATGGAGCCGAGCTTACGAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCGCGATGGACTCTGCATaGTACTCATGGGAGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EFHLTQQISGQENSQISGAMDSA*YSWEPW Trigger: CCATGGCTCCCATGAGTACCATGCAGAGTCCATCGC...GCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GGGATTAAAGGCTCAGGGCATCTTAGAGTCCAGCTGAGCGGATTGAGACAGGGACTGCCACCACATCACTaGCTTTTCGTACAAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIKGSGHLRVQLSGLRQGLPPHH*LFVQRR Trigger: CCTCCTTTGTACGAAAAGCCAGTGATGTGGTGGCAG...TCCCTGTCTCAATCCGCTCAGCTGGACTCTAAGATGCCCTGAGCCTTTAATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | GCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATGAGACCTTGTCTCCAGCATCTGTGTaGCACAAACGACAGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGGFLGVWGQSELYNETLSPASV*HKRQAC Trigger: GCAAGCCTGTCGTTTGTGCCACACAGATGCTGGAGA...CAAGGTCTCATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | TGGGTTTACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGCACCACTAAGGAGATaGGCCCGTCGTCAATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVYCCEEEGGLEYPILGRAPLRR*ARRQCR Trigger: TCTACATTGACGACGGGCTCATCTCCTTAGTGGTGC...CCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTAAACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | CATCTTTGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGTGATCTGCGGCACAGCACTTaGAGGAAGCCTCCACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLCGPCTMPSAAILKFCDLRHST*RKPPRL Trigger: GAGCCGTGGAGGCTTCCTTCAAGTGCTGTGCCGCAG...ATCACAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACAAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGGTTGGCGATGGACTCTaGATGGTACTCATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DKVVVEEFHLTQQISGQEVGDGL*MVLMGA Trigger: GGCTCCCATGAGTACCATGCAGAGTCCATCGCCAAC...CTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GGGATTAAAGGCTCAGGGCATCTTAGAGTCCAGCTGAGCGGATTGAGACAGGGAAGATCCAAAAGATCTTaGTCTGATAGCCCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIKGSGHLRVQLSGLRQGRSKRS*SDSPGR Trigger: CCTGCCTGGGCTATCAGAGCAAGATCTTTTGGATCT...TCCCTGTCTCAATCCGCTCAGCTGGACTCTAAGATGCCCTGAGCCTTTAATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GTGCGTAATTGGACCCAGACATTCAGGGCCTGTGTGAAGTACCAGACTGTGGCTAGATCCAAAAGATCTTaGTCTGATAGCCCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRNWTQTFRACVKYQTVARSKRS*SDSPGR Trigger: CCTGCCTGGGCTATCAGAGCAAGATCTTTTGGATCT...AGCCACAGTCTGGTACTTCACACAGGCCCTGAATGTCTGGGTCCAATTACGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATGAGACCTTGTACTCATGGGAGCCATaGGAGAAGTTGAGTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGGFLGVWGQSELYNETLYSWEP*EKLSRA Trigger: TGCACGACTCAACTTCTCCCATGGCTCCCATGAGTA...CAAGGTCTCATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR CCA 90 bp | TTTACCCAGTCTCCACTCCCCCGTTCTAATTATCAGGACCCAGGAGGAATCGAAGGGTCTGTAGCTGAGTaGGGAGGTTGCAAAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTQSPLPRSNYQDPGGIEGSVAE*GGCKAF Trigger: GAAAGCTTTGCAACCTCCCCACTCAGCTACAGACCC...TTCGATTCCTCCTGGGTCCTGATAATTAGAACGGGGGAGTGGAGACTGGGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR TCA 90 bp | GACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGTCTTTGTCAGCACAATaGTGGCTGCGGCACAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: DKVVVEEFHLTQQISGQESLSAQ*WLRHST Trigger: AGTGCTGTGCCGCAGCCATCATTGTGCTGACAAAGA...CTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR GCA 90 bp | GGGATTAAAGGCTCAGGGCATCTTAGAGTCCAGCTGAGCGGATTGAGACAGGGATGCAATGTTCATCCCTaGCTTGATCATCTCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GIKGSGHLRVQLSGLRQGCNVHP*LDHLLE Trigger: CTCAAGGAGATGATCAAGGCAGGGATGAACATTGCA...TCCCTGTCTCAATCCGCTCAGCTGGACTCTAAGATGCCCTGAGCCTTTAATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR CCA 90 bp | GTGGCTCGTAAGCTCGGCTCCATGGTTTGTGGAGTCAGTAAGAAAGTAAGACTATCTCCAGCATCTGTGTaGCACAAACGACAGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VARKLGSMVCGVSKKVRLSPASV*HKRQAC Trigger: GCAAGCCTGTCGTTTGTGCCACACAGATGCTGGAGA...TAGTCTTACTTTCTTACTGACTCCACAAACCATGGAGCCGAGCTTACGAGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| 3UTR CAA 72 bp | CTTCTGGTAGGGGCCTGGGGAACATCTTTGTGGTCCTaGCACAATGCCATCTGCAGCAATACTCAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVGAWGTSLWS*HNAICSNTQIL Trigger: CAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACAAAGATGTTCCCCAGGCCCCTACCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
||
| CDS-3UTR TCA 90 bp | GGGACTATGGGAGGGGTGTGGGTTGAAAGAAATGGGGTGCAACTAGGTCAGAAACAAAGGAGGCAAAGATaGTGTCCACATTATGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTMGGVWVERNGVQLGQKQRRQR*CPHYAP Trigger: TGGAGCATAATGTGGACATCATCTTTGCCTCCTTTG...TTTCTGACCTAGTTGCACCCCATTTCTTTCAACCCACACCCCTCCCATAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR GCA 90 bp | GGGACTATGGGAGGGGTGTGGGTTGAAAGAAATGGGGTGCAACTAGGTCAGAAACAAGAAAACCTTCTCTaGTGGGATCTCAATGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTMGGVWVERNGVQLGQKQENLL*WDLNAK Trigger: CTTGGCATTGAGATCCCAGCAGAGAAGGTTTTCTTG...TTTCTGACCTAGTTGCACCCCATTTCTTTCAACCCACACCCCTCCCATAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR CCA 90 bp | GTGGCTCGTAAGCTCGGCTCCATGGTTTGTGGAGTCAGTAAGAAAGTAAGACTATACTCATGGGAGCCATaGGAGAAGTTGAGTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VARKLGSMVCGVSKKVRLYSWEP*EKLSRA Trigger: TGCACGACTCAACTTCTCCCATGGCTCCCATGAGTA...TAGTCTTACTTTCTTACTGACTCCACAAACCATGGAGCCGAGCTTACGAGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | ATTTGGATAAGTTTACCCAGTCTCCACTCCCCCGTTCTAATTATCAGGACCCAGGGGTCTGTAGCTGAGTaGGGAGGTTGCAAAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IWISLPSLHSPVLIIRTQGSVAE*GGCKAF Trigger: GAAAGCTTTGCAACCTCCCCACTCAGCTACAGACCC...CTGGGTCCTGATAATTAGAACGGGGGAGTGGAGACTGGGTAAACTTATCCAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CCA 90 bp | CTTCTGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCACATCCAGCACAGCATTaGCCACATCGCTTGTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLICMWGQSGCGRISSDPHPAQH*PHRLSP Trigger: CGGAGACAAGCGATGTGGCCAATGCTGTGCTGGATG...TGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR TCA 90 bp | GAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCCAAAGGAGGCAAAGATaGTGTCCACATTATGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EFHLTQQISGQENSQISGQRRQR*CPHYAP Trigger: TGGAGCATAATGTGGACATCATCTTTGCCTCCTTTG...GCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | TATCAGGACCCAGGAGGAATCGAATTAACCAGCTGGGCTGGGATTAAAGGCTCATGCAATGTTCATCCCTaGCTTGATCATCTCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YQDPGGIELTSWAGIKGSCNVHP*LDHLLE Trigger: CTCAAGGAGATGATCAAGGCAGGGATGAACATTGCA...TGAGCCTTTAATCCCAGCCCAGCTGGTTAATTCGATTCCTCCTGGGTCCTGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | CTTCTGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAATGATGTCCACATTATaGTCCACCCCGAAGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLICMWGQSGCGRISSDPMMSTL*STPKRR Trigger: TCTGCGCTTCGGGGTGGAGCATAATGTGGACATCAT...TGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR GCA 90 bp | GTGGCTCGTAAGCTCGGCTCCATGGTTTGTGGAGTCAGTAAGAAAGTAAGACTACAAGAAAACCTTCTCTaGTGGGATCTCAATGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VARKLGSMVCGVSKKVRLQENLL*WDLNAK Trigger: CTTGGCATTGAGATCCCAGCAGAGAAGGTTTTCTTG...TAGTCTTACTTTCTTACTGACTCCACAAACCATGGAGCCGAGCTTACGAGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS TCA 90 bp | TCTCGGGACCCTTGGTGTCCAGGGCGATGGCCACGGGTCTGTAGCTaGGTGGGGAGGTTGCAAAGCTTTCAGCCGCCTCCCGAATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRDPWCPGRWPRVCS*VGRLQSFQPPPECW Trigger: CCAACATTCGGGAGGCGGCTGAAAGCTTTGCAACCTCCCCACTCAGCTACAGACCCGTGGCCATCGCCCTGGACACCAAGGGTCCCGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS GCA 90 bp | GGTGTCCAGGGCGATGGCCACGGGTCTGTAGCTGAGTGGGGAGGTTaGAAAGCTTTCAGCCGCCTCCCGAATGTTGGCGATGGACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVQGDGHGSVAEWGG*KAFSRLPNVGDGLC Trigger: GCAGAGTCCATCGCCAACATTCGGGAGGCGGCTGAAAGCTTTGCAACCTCCCCACTCAGCTACAGACCCGTGGCCATCGCCCTGGACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS CCA 90 bp | GGGACCCTTGGTGTCCAGGGCGATGGCCACGGGTCTGTAGCTGAGTaGGGAGGTTGCAAAGCTTTCAGCCGCCTCCCGAATGTTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: GTLGVQGDGHGSVAE*GGCKAFSRLPNVGD Trigger: ATCGCCAACATTCGGGAGGCGGCTGAAAGCTTTGCAACCTCCCCACTCAGCTACAGACCCGTGGCCATCGCCCTGGACACCAAGGGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS TCA 90 bp | CCCGATGGTGGCAATGATGCTGGTGCTCCTAGCGGCCACAGGCTCTaGGTCGATATCCAGAAGGCAGAGGTGTTCCAGGAAGGTGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PDGGNDAGAPSGHRL*VDIQKAEVFQEGVR Trigger: GCGGACACCTTCCTGGAACACCTCTGCCTTCTGGATATCGACTCAGAGCCTGTGGCCGCTAGGAGCACCAGCATCATTGCCACCATCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 ENSMUST00000127058.2 |
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| CDS CCA 90 bp | GCCAAATTGGACCCTTCGGTCCACATCATCTGCCCAGACAGCCTCTaGAGGCTCACGGTAGAGCAAGGGGAAGACTCCTCGGGACAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AKLDPSVHIICPDSL*RLTVEQGEDSSGQV Trigger: CACCTGTCCCGAGGAGTCTTCCCCTTGCTCTACCGTGAGCCTCCAGAGGCTGTCTGGGCAGATGATGTGGACCGAAGGGTCCAATTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR CAA 90 bp | AGACTACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGCGTATCTCGGGACCCTaGGTGTCCAGGGCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLPKVQLVTHACSPYPLRRISGP*VSRAMA Trigger: GGCCATCGCCCTGGACACCAAGGGTCCCGAGATACG...CCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR CAA 90 bp | AGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCTCGTAAGCTCGGCTCCGCCGCCTCCCGAATGTaGGCGATGGACTCTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSVGKRTARLVARKLGSAASRM*AMDSAW Trigger: CCATGCAGAGTCCATCGCCAACATTCGGGAGGCGGC...GGAGCCGAGCTTACGAGCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR CAA 90 bp | TACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGGCCTTGATCATCTCCTaGAGGCGGTCCACAGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: YLKSSWSLMPAVLTPSGGALIIS*RRSTER Trigger: ACGCTCTGTGGACCGCCTCAAGGAGATGATCAAGGC...CCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | GGGATTAAAGGCTCAGGGCATCTTAGAGTCCAGCTGAGCGGATTGAGACAGGGAGCCGCCTCCCGAATGTaGGCGATGGACTCTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GIKGSGHLRVQLSGLRQGAASRM*AMDSAW Trigger: CCATGCAGAGTCCATCGCCAACATTCGGGAGGCGGC...TCCCTGTCTCAATCCGCTCAGCTGGACTCTAAGATGCCCTGAGCCTTTAATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS-3UTR CAA 90 bp | AGCACCCATCTACCCCAGCCTTCCCTAAAGTGTGGAGCTGTGCTCCCTGAAGGAGGTCCACCTCGGCATTaGGCAAGTTCACACCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STHLPQPSLKCGAVLPEGGPPRH*ASSHPS Trigger: GGAAGGGTGTGAACTTGCCAAATGCCGAGGTGGACC...TCCTTCAGGGAGCACAGCTCCACACTTTAGGGAAGGCTGGGGTAGATGGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | AGCACCCATCTACCCCAGCCTTCCCTAAAGTGTGGAGCTGTGCTCCCTGAAGGACCATCCAGCACAGCATaGGCCACATCGCTTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: STHLPQPSLKCGAVLPEGPSSTA*ATSLVS Trigger: GGAGACAAGCGATGTGGCCAATGCTGTGCTGGATGG...TCCTTCAGGGAGCACAGCTCCACACTTTAGGGAAGGCTGGGGTAGATGGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | GACTACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGTCCACCTCGGCATTaGGCAAGTTCACACCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DYLKSSWSLMPAVLTPSGGPPRH*ASSHPS Trigger: GGAAGGGTGTGAACTTGCCAAATGCCGAGGTGGACC...TCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | GGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATGAGGCACAAACGACAGGCTaGCCAGCCAGGTTGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GQAGGFLGVWGQSELYNEAQTTG*PARLQR Trigger: ACGCTGCAACCTGGCTGGCAAGCCTGTCGTTTGTGC...CTCATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS GCA 90 bp | TGCAACGACCTGGGTGATATTGTGGTAGTCCACCCACACTGTCTTTaGATCGCCCCTTGTCCGGAACTTCGGATCCACAGTCACCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CNDLGDIVVVHPHCL*IAPCPELRIHSHQH Trigger: GTGCTGGTGACTGTGGATCCGAAGTTCCGGACAAGGGGCGATGCAAAGACAGTGTGGGTGGACTACCACAATATCACCCAGGTCGTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS GCA 90 bp | CTTTCCACTTTCGATGCCAAATTGGACCCTTCGGTCCACATCATCTaGCCAGACAGCCTCTGGAGGCTCACGGTAGAGCAAGGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSTFDAKLDPSVHII*PDSLWRLTVEQGED Trigger: GTCTTCCCCTTGCTCTACCGTGAGCCTCCAGAGGCTGTCTGGGCAGATGATGTGGACCGAAGGGTCCAATTTGGCATCGAAAGTGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | TTAGTTCTCTCCAGCACCCATCTACCCCAGCCTTCCCTAAAGTGTGGAGCTGTGGCCTTGATCATCTCCTaGAGGCGGTCCACAGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLSSTHLPQPSLKCGAVALIIS*RRSTER Trigger: ACGCTCTGTGGACCGCCTCAAGGAGATGATCAAGGC...CACAGCTCCACACTTTAGGGAAGGCTGGGGTAGATGGGTGCTGGAGAGAACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | AGCACCCATCTACCCCAGCCTTCCCTAAAGTGTGGAGCTGTGCTCCCTGAAGGAATGTTCATCCCTGCCTaGATCATCTCCTTGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: STHLPQPSLKCGAVLPEGMFIPA*IISLRR Trigger: CCGCCTCAAGGAGATGATCAAGGCAGGGATGAACAT...TCCTTCAGGGAGCACAGCTCCACACTTTAGGGAAGGCTGGGGTAGATGGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | GACTACCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGACCGGGCAATCGCATGTaGCATCTTTACAGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DYLKSSWSLMPAVLTPSGPGNRM*HLYSLH Trigger: GTGGAGGCTGTAAAGATGCAACATGCGATTGCCCGG...TCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | TGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGTGATGAGGTGCGTATCTCGGGACCCTaGGTGTCCAGGGCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CGPCTMPSAAILKFCDEVRISGP*VSRAMA Trigger: GGCCATCGCCCTGGACACCAAGGGTCCCGAGATACG...CACCTCATCACAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | GACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGGCTGCGGCACAGCACTaGAAGGAAGCCTCCACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DKVVVEEFHLTQQISGQEAAAQH*KEASTA Trigger: AGCCGTGGAGGCTTCCTTCAAGTGCTGTGCCGCAGC...CTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | GACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGGCACAAACGACAGGCTaGCCAGCCAGGTTGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: DKVVVEEFHLTQQISGQEAQTTG*PARLQR Trigger: ACGCTGCAACCTGGCTGGCAAGCCTGTCGTTTGTGC...CTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | CTTCTGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCTGCGGCACAGCACTaGAAGGAAGCCTCCACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLICMWGQSGCGRISSDPAAAQH*KEASTA Trigger: AGCCGTGGAGGCTTCCTTCAAGTGCTGTGCCGCAGC...TGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | TGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGTGATGAGGTGCCATCCAGCACAGCATaGGCCACATCGCTTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CGPCTMPSAAILKFCDEVPSSTA*ATSLVS Trigger: GGAGACAAGCGATGTGGCCAATGCTGTGCTGGATGG...CACCTCATCACAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | GAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCGAGCCATGGGAGAAGTaGAGTCGTGCAATGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: EFHLTQQISGQENSQISGEPWEK*SRAMFI Trigger: GATGAACATTGCACGACTCAACTTCTCCCATGGCTC...GCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | TGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGTGATGAGGTGATGTTCATCCCTGCCTaGATCATCTCCTTGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CGPCTMPSAAILKFCDEVMFIPA*IISLRR Trigger: CCGCCTCAAGGAGATGATCAAGGCAGGGATGAACAT...CACCTCATCACAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | CTTCTGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCACCGGGCAATCGCATGTaGCATCTTTACAGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLICMWGQSGCGRISSDPPGNRM*HLYSLH Trigger: GTGGAGGCTGTAAAGATGCAACATGCGATTGCCCGG...TGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | GAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCATTTTGCTGATAATTTaGATGCCCCGTCCTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EFHLTQQISGQENSQISGILLII*MPRPSG Trigger: GCCAGAAGGACGGGGCATCAAAATTATCAGCAAAAT...GCCACTAATCTGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATGAAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | CTTCTGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGAGCCATGGGAGAAGTaGAGTCGTGCAATGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LLICMWGQSGCGRISSDPEPWEK*SRAMFI Trigger: GATGAACATTGCACGACTCAACTTCTCCCATGGCTC...TGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS-3UTR CAA 90 bp | ATTTGGATAAGTTTACCCAGTCTCCACTCCCCCGTTCTAATTATCAGGACCCAGCACTTAAAGCAGACTTaGCTAAGTCTTTTTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: IWISLPSLHSPVLIIRTQHLKQT*LSLFGT Trigger: AGTCCCAAAAAGACTTAGCAAAGTCTGCTTTAAGTG...CTGGGTCCTGATAATTAGAACGGGGGAGTGGAGACTGGGTAAACTTATCCAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047111.13 |
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| CDS-3UTR CAA 90 bp | CATCTTTGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGTGATATTTTGCTGATAATTTaGATGCCCCGTCCTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLCGPCTMPSAAILKFCDILLII*MPRPSG Trigger: GCCAGAAGGACGGGGCATCAAAATTATCAGCAAAAT...ATCACAGAATTTGAGTATTGCTGCAGATGGCATTGTGCAAGGACCACAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107482.10 |
||
| CDS TCA 72 bp | CCTTGGTGTCCAGGGCGATGGCCACGGGTCTGTAGCTaGGTGGGGAGGTTGCAAAGCTTTCAGCCGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PWCPGRWPRVCS*VGRLQSFQPPP Trigger: GGGAGGCGGCTGAAAGCTTTGCAACCTCCCCACTCAGCTACAGACCCGTGGCCATCGCCCTGGACACCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS CCA 72 bp | GGTGTCCAGGGCGATGGCCACGGGTCTGTAGCTGAGTaGGGAGGTTGCAAAGCTTTCAGCCGCCTCCCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GVQGDGHGSVAE*GGCKAFSRLPN Trigger: ATTCGGGAGGCGGCTGAAAGCTTTGCAACCTCCCCACTCAGCTACAGACCCGTGGCCATCGCCCTGGACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS CCA 72 bp | GACCCTTCGGTCCACATCATCTGCCCAGACAGCCTCTaGAGGCTCACGGTAGAGCAAGGGGAAGACTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: DPSVHIICPDSL*RLTVEQGEDSS Trigger: CGAGGAGTCTTCCCCTTGCTCTACCGTGAGCCTCCAGAGGCTGTCTGGGCAGATGATGTGGACCGAAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS CAA 72 bp | AGTCGTGCAATGTTCATCCCTGCCTTGATCATCTCCTaGAGGCGGTCCACAGAGCGTGACGCCGGCCCGATG | + |
|
Preference number: 6 (lower is better) Translates to: SRAMFIPALIIS*RRSTERDAGPM Trigger: CATCGGGCCGGCGTCACGCTCTGTGGACCGCCTCAAGGAGATGATCAAGGCAGGGATGAACATTGCACGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 ENSMUST00000127058.2 |
||
| CDS CAA 90 bp | GAGAAGTTGAGTCGTGCAATGTTCATCCCTGCCTTGATCATCTCCTaGAGGCGGTCCACAGAGCGTGACGCCGGCCCGATGGTGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: EKLSRAMFIPALIIS*RRSTERDAGPMVAM Trigger: CATTGCCACCATCGGGCCGGCGTCACGCTCTGTGGACCGCCTCAAGGAGATGATCAAGGCAGGGATGAACATTGCACGACTCAACTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 ENSMUST00000127058.2 |
||
| CDS GCA 72 bp | TACACAGCGGCCTCTGCCTCCCGGGCAATCGCATGTTaGATCTTTACAGCCTCCACGGGGAAACTGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: YTAASASRAIAC*IFTASTGKLPL Trigger: CAAAGGCAGTTTCCCCGTGGAGGCTGTAAAGATGCAACATGCGATTGCCCGGGAGGCAGAGGCCGCTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS GCA 72 bp | CTCCTCAAACAACTGGCGGTGGTACACAGCGGCCTCTaGCTCCCGGGCAATCGCATGTTGCATCTTTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLKQLAVVHSGL*LPGNRMLHLYS Trigger: GCTGTAAAGATGCAACATGCGATTGCCCGGGAGGCAGAGGCCGCTGTGTACCACCGCCAGTTGTTTGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
||
| CDS CAA 72 bp | GGGGAGGTTGCAAAGCTTTCAGCCGCCTCCCGAATGTaGGCGATGGACTCTGCATGGTACTCATGGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GEVAKLSAASRM*AMDSAWYSWEP Trigger: TGGCTCCCATGAGTACCATGCAGAGTCCATCGCCAACATTCGGGAGGCGGCTGAAAGCTTTGCAACCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS TCA 72 bp | GGCAATGATGCTGGTGCTCCTAGCGGCCACAGGCTCTaGGTCGATATCCAGAAGGCAGAGGTGTTCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GNDAGAPSGHRL*VDIQKAEVFQE Trigger: TTCCTGGAACACCTCTGCCTTCTGGATATCGACTCAGAGCCTGTGGCCGCTAGGAGCACCAGCATCATTGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 ENSMUST00000127058.2 |
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| CDS CAA 72 bp | TGTGGTAGTCCACCCACACTGTCTTTGCATCGCCCCTaGTCCGGAACTTCGGATCCACAGTCACCAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: CGSPPTLSLHRP*SGTSDPQSPAP Trigger: AGGTGCTGGTGACTGTGGATCCGAAGTTCCGGACAAGGGGCGATGCAAAGACAGTGTGGGTGGACTACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS TCA 72 bp | TGTCCGGAACTTCGGATCCACAGTCACCAGCACCTGTaGACCCTTCACAATTTCCACCTCCGACTCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: CPELRIHSHQHL*TLHNFHLRLWT Trigger: GGTCCAGAGTCGGAGGTGGAAATTGTGAAGGGTTCACAGGTGCTGGTGACTGTGGATCCGAAGTTCCGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS GCA 72 bp | TTCGATGCCAAATTGGACCCTTCGGTCCACATCATCTaGCCAGACAGCCTCTGGAGGCTCACGGTAGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: FDAKLDPSVHII*PDSLWRLTVEQ Trigger: TTGCTCTACCGTGAGCCTCCAGAGGCTGTCTGGGCAGATGATGTGGACCGAAGGGTCCAATTTGGCATCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS CCA 72 bp | TTGCAAAGCTTTCAGCCGCCTCCCGAATGTTGGCGATaGACTCTGCATGGTACTCATGGGAGCCATGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LQSFQPPPECWR*TLHGTHGSHGR Trigger: TCTCCCATGGCTCCCATGAGTACCATGCAGAGTCCATCGCCAACATTCGGGAGGCGGCTGAAAGCTTTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS GCA 72 bp | CTGGGTGATATTGTGGTAGTCCACCCACACTGTCTTTaGATCGCCCCTTGTCCGGAACTTCGGATCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: LGDIVVVHPHCL*IAPCPELRIHS Trigger: ACTGTGGATCCGAAGTTCCGGACAAGGGGCGATGCAAAGACAGTGTGGGTGGACTACCACAATATCACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS CCA 72 bp | AGGAAGCCACGAAGCTTTCCACTTTCGATGCCAAATTaGACCCTTCGGTCCACATCATCTGCCCAGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: RKPRSFPLSMPN*TLRSTSSAQTA Trigger: GGCTGTCTGGGCAGATGATGTGGACCGAAGGGTCCAATTTGGCATCGAAAGTGGAAAGCTTCGTGGCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS CAA 72 bp | GAGGAAGCCACGAAGCTTTCCACTTTCGATGCCAAATaGGACCCTTCGGTCCACATCATCTGCCCAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: EEATKLSTFDAK*DPSVHIICPDS Trigger: GCTGTCTGGGCAGATGATGTGGACCGAAGGGTCCAATTTGGCATCGAAAGTGGAAAGCTTCGTGGCTTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS TCA 72 bp | CCACATCACTGGCTTTTCGTACAAAGGAGGCAAAGATaGTGTCCACATTATGCTCCACCCCGAAGCGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: PHHWLFVQRRQR*CPHYAPPRSAD Trigger: ATCTGCGCTTCGGGGTGGAGCATAATGTGGACATCATCTTTGCCTCCTTTGTACGAAAAGCCAGTGATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS CAA 90 bp | TCTAGGATCTCATCAAACTTCTTCACGCCTTCATGGTTCTCGATTTaGCTGATAATTTTGATGCCCCGTCCTTCTGGCCCTAGGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SRISSNFFTPSWFSI*LIILMPRPSGPRAS Trigger: AGATGCCCTAGGGCCAGAAGGACGGGGCATCAAAATTATCAGCAAAATCGAGAACCATGAAGGCGTGAAGAAGTTTGATGAGATCCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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| CDS GCA 72 bp | TTTCGTACAAAGGAGGCAAAGATGATGTCCACATTATaGTCCACCCCGAAGCGCAGATCCAAAAGATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FRTKEAKMMSTL*STPKRRSKRSC Trigger: GCAAGATCTTTTGGATCTGCGCTTCGGGGTGGAGCATAATGTGGACATCATCTTTGCCTCCTTTGTACGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047111.13 ENSMUST00000107482.10 |
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