Pregenerated sensors for PKIB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019876Ensembl transcript IDs: ENSMUST00000066028.13, ENSMUST00000075992.12, ENSMUST00000095668.10, ENSMUST00000175852.2, ENSMUST00000177325.8, ENSMUST00000177473.8
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAGCAGCATCCCAGCTCTGTTCTCTCCATTCCAGCAGCAACTTCTaGCCCCACTTCCTTTCCCCAGTGGTCTCCAGACTGTGTCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: IAASQLCSLHSSSNF*PHFLSPVVSRLCQS Trigger: ACTTTGACACAGTCTGGAGACCACTGGGGAAAGGAAGTGGGGGCAGAAGTTGCTGCTGGAATGGAGAGAACAGAGCTGGGATGCTGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR CCA 90 bp | ACTCTGTGGAAGTCAGGGAGGAAAGATTGTAGACGACAGGGAGGATaGAAGACACCAGGAGAACATGGCCTACAGAGTCAGCTAAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TLWKSGRKDCRRQGG*KTPGEHGLQSQLSR Trigger: CCTGCTTAGCTGACTCTGTAGGCCATGTTCTCCTGGTGTCTTCCATCCTCCCTGTCGTCTACAATCTTTCCTCCCTGACTTCCACAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR GCA 90 bp | CTCTTACGAGATGAGACAGGAAGGGGAAGCTACATAAGAGAGCAGTaGACCCCATCATTCTTCCTGTCTTCCTGCTATGTTCCACTGTAC | + |
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Preference number: 1 (lower is better) Translates to: LLRDETGRGSYIREQ*TPSFFLSSCYVPLY Trigger: GTACAGTGGAACATAGCAGGAAGACAGGAAGAATGATGGGGTGCACTGCTCTCTTATGTAGCTTCCCCTTCCTGTCTCATCTCGTAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| 3UTR TCA 90 bp | ACACACACACACACACACACACACACACGCTACCATGGGTTACCATaGTTACTACCAGATCAAACACCCCAGGAATACATAGCTGCTATG | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTRYHGLP*LLPDQTPQEYIAAM Trigger: CATAGCAGCTATGTATTCCTGGGGTGTTTGATCTGGTAGTAATCATGGTAACCCATGGTAGCGTGTGTGTGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR CCA 90 bp | TCCCATTGTCTTTGCAGTCAGGAGTCAGAGAGAAATGAACATTGGTaGTCGGCTGACTTTTTCCACTTTACTTTTTATTCAGTCTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: SHCLCSQESERNEHW*SADFFHFTFYSVWE Trigger: CTCCCAGACTGAATAAAAAGTAAAGTGGAAAAAGTCAGCCGACCACCAATGTTCATTTCTCTCTGACTCCTGACTGCAAAGACAATGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| 3UTR CCA 90 bp | TGCTCCCATTGTCTTTGCAGTCAGGAGTCAGAGAGAAATGAACATTaGTGGTCGGCTGACTTTTTCCACTTTACTTTTTATTCAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: CSHCLCSQESERNEH*WSADFFHFTFYSVW Trigger: CCAGACTGAATAAAAAGTAAAGTGGAAAAAGTCAGCCGACCACCAATGTTCATTTCTCTCTGACTCCTGACTGCAAAGACAATGGGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| 3UTR GCA 90 bp | AATACTGCTATGAAGAACAGAGCTACTGTGATAAACCTGGTTATGTaGTTCACAGACACACATAAAGCTGCTTTAAGCCAGCTTTGCGGA | + |
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Preference number: 1 (lower is better) Translates to: NTAMKNRATVINLVM*FTDTHKAALSQLCG Trigger: TCCGCAAAGCTGGCTTAAAGCAGCTTTATGTGTGTCTGTGAAGCACATAACCAGGTTTATCACAGTAGCTCTGTTCTTCATAGCAGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| 3UTR TCA 90 bp | TTAACTCAAGTAGGAGCCGTACACAAAGACAATACAGAAATGAGCTaGAGTCTTTTGTTTATTAGCTACACCTGCCCAGTCAAGCAATTT | + |
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Preference number: 1 (lower is better) Translates to: LTQVGAVHKDNTEMS*SLLFISYTCPVKQF Trigger: AAATTGCTTGACTGGGCAGGTGTAGCTAATAAACAAAAGACTTCAGCTCATTTCTGTATTGTCTTTGTGTACGGCTCCTACTTGAGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| 3UTR CCA 90 bp | TGTAGTATGGCTCAGCCCTTTGTACATACCTTTAATCTCTCTGGCTaGAATATAGACATATCCTTAGTACACATCTTTAATCCCAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: CSMAQPFVHTFNLSG*NIDISLVHIFNPKN Trigger: ATTTTTGGGATTAAAGATGTGTACTAAGGATATGTCTATATTCCAGCCAGAGAGATTAAAGGTATGTACAAAGGGCTGAGCCATACTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| 3UTR-3UTR GCA 90 bp | CAGCAACTTCTGCCCCCACTTCCTTTCCCCAGTGGTCTCCAGACTGTGTCAAAGACGCTCGCGCGCGCTTaGACACACACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: QQLLPPLPFPSGLQTVSKTLARA*THTHTH Trigger: GTGTGTGTGTGTGTGTGTGCAAGCGCGCGCGAGCGT...CTTTGACACAGTCTGGAGACCACTGGGGAAAGGAAGTGGGGGCAGAAGTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAGATTGTAGACGACAGGGAGGATGGAAGACACCAGGAGAACATGGCCTATTCACAGGAGCTCACTaGAGGGACAAGCACGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: RKDCRRQGGWKTPGEHGLFTGAH*RDKHGA Trigger: GGCCCCGTGCTTGTCCCTTCAGTGAGCTCCTGTGAA...TAGGCCATGTTCTCCTGGTGTCTTCCATCCTCCCTGTCGTCTACAATCTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAGATTGTAGACGACAGGGAGGATGGAAGACACCAGGAGAACATGGCCTAACGCTCGCGCGCGCTTaGACACACACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: RKDCRRQGGWKTPGEHGLTLARA*THTHTH Trigger: GTGTGTGTGTGTGTGTGTGCAAGCGCGCGCGAGCGT...TAGGCCATGTTCTCCTGGTGTCTTCCATCCTCCCTGTCGTCTACAATCTTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | TCTAGAAAATTCCTCATTGAGACTCTTCCTCCCCCAGGTGATCCTAGGCGTGTCTCCTGGGTTGCCCTGTaGAGATTGGATTGGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SRKFLIETLPPPGDPRRVSWVAL*RLDWRA Trigger: AGCCCTCCAATCCAATCTGCACAGGGCAACCCAGGA...GACACGCCTAGGATCACCTGGGGGAGGAAGAGTCTCAATGAGGAATTTTCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | CACGGGGCCTGCAGGGGTCTGCAGCAGGTCTTCTGCATATATGTTGTGGCTTTTAGGGGAAAGCATCTGTaGGGAAGAAATAGGGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: HGACRGLQQVFCIYVVAFRGKHL*GRNRGN Trigger: ATTCCCCCTATTTCTTCCCCACAGATGCTTTCCCCT...AAAAGCCACAACATATATGCAGAAGACCTGCTGCAGACCCCTGCAGGCCCCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCAACTTCTGCCCCCACTTCCTTTCCCCAGTGGTCTCCAGACTGTGTCAAAGTGCTTCTTGGAGGCCTaGTCTTTTCTGAAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: QQLLPPLPFPSGLQTVSKCFLEA*SFLKGK Trigger: TTTTCCCTTCAGAAAAGAGCAGGCCTCCAAGAAGCA...CTTTGACACAGTCTGGAGACCACTGGGGAAAGGAAGTGGGGGCAGAAGTTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | CCACCCTTTCAATTGTATCCTCCCTTTATACCCAGCCTATTTCAGAAGACAAAAGACAAGCACGGGGCCTaGAGGGGTCTGCAGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: PPFQLYPPFIPSLFQKTKDKHGA*RGLQQV Trigger: GACCTGCTGCAGACCCCTGCAGGCCCCGTGCTTGTC...TTTTGTCTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAAAGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | CACGGGGCCTGCAGGGGTCTGCAGCAGGTCTTCTGCATATATGTTGTGGCTTTTTCTTTTGCCTACTCTTaGGACGCTTTTCATCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HGACRGLQQVFCIYVVAFSFAYS*DAFHPP Trigger: AGGAGGATGAAAAGCGTCCCAAGAGTAGGCAAAAGA...AAAAGCCACAACATATATGCAGAAGACCTGCTGCAGACCCCTGCAGGCCCCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR TCA 90 bp | AGACAACCTTACCCATCACATCCACAGTCCAGAGCAGAGAGGAAATCAATGCAGGAGTGGGCGACTCTCTaGTTCTTTTGCCTACTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RQPYPSHPQSRAERKSMQEWATL*FFCLLL Trigger: CAAGAGTAGGCAAAAGAATCAGAGAGTCGCCCACTC...CTGCATTGATTTCCTCTCTGCTCTGGACTGTGGATGTGATGGGTAAGGTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR TCA 90 bp | ACAACCTTACCCATCACATCCACAGTCCAGAGCAGAGAGGAAATCAATGCAGGCTTTCCCCCACTCTTATaGAATCTAGGAGCCCAAACC | + |
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Preference number: 2 (lower is better) Translates to: TTLPITSTVQSREEINAGFPPLL*NLGAQT Trigger: GGTTTGGGCTCCTAGATTTCATAAGAGTGGGGGAAA...GCCTGCATTGATTTCCTCTCTGCTCTGGACTGTGGATGTGATGGGTAAGGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | ACAACCTTACCCATCACATCCACAGTCCAGAGCAGAGAGGAAATCAATGCAGGCTTGTGTGTTTCCTGTTaGTTCTTGGAGGCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TTLPITSTVQSREEINAGLCVSC*FLEACS Trigger: AGAGCAGGCCTCCAAGAAGCAACAGGAAACACACAA...GCCTGCATTGATTTCCTCTCTGCTCTGGACTGTGGATGTGATGGGTAAGGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | GGACAGAGCATCACAACAAAATTACCTAAAACACACGCTCGCGCGCGCTTGCACACACACACGCTACCATaGGTTACCATGATTACTACC | + |
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Preference number: 2 (lower is better) Translates to: GQSITTKLPKTHARARLHTHTLP*VTMITT Trigger: GGTAGTAATCATGGTAACCCATGGTAGCGTGTGTGT...GTGCAAGCGCGCGCGAGCGTGTGTTTTAGGTAATTTTGTTGTGATGCTCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR TCA 90 bp | CAGCAACTTCTGCCCCCACTTCCTTTCCCCAGTGGTCTCCAGACTGTGTCAAAGAGCTTTATGTTTTTGTaGAACTCCAAACAATGGGAG | + |
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Preference number: 2 (lower is better) Translates to: QQLLPPLPFPSGLQTVSKSFMFL*NSKQWE Trigger: CTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCT...CTTTGACACAGTCTGGAGACCACTGGGGAAAGGAAGTGGGGGCAGAAGTTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | AAGATTGTAGACGACAGGGAGGATGGAAGACACCAGGAGAACATGGCCTACAGATGCTTCTTGGAGGCCTaGTCTTTTCTGAAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: KIVDDREDGRHQENMAYRCFLEA*SFLKGK Trigger: TTTTCCCTTCAGAAAAGAGCAGGCCTCCAAGAAGCA...TCTGTAGGCCATGTTCTCCTGGTGTCTTCCATCCTCCCTGTCGTCTACAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | CATAAGGTCTACTACCCGTTAATAGCAGCATCCCAGCTCTGTTCTCTCCATTCCTTGTGTGTTTCCTGTTaGTTCTTGGAGGCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HKVYYPLIAASQLCSLHSLCVSC*FLEACS Trigger: AGAGCAGGCCTCCAAGAAGCAACAGGAAACACACAA...GGAATGGAGAGAACAGAGCTGGGATGCTGCTATTAACGGGTAGTAGACCTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | TCGCTAGTACATAGGAATAAAATTCAAATCCAGGGAGTTCTTTCTCCGGTCTCTGGGCCTGCAGGGGTCTaGAGCAGGTCTTCTGCATAT | + |
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Preference number: 2 (lower is better) Translates to: SLVHRNKIQIQGVLSPVSGPAGV*SRSSAY Trigger: ATATGCAGAAGACCTGCTGCAGACCCCTGCAGGCCC...AGAGACCGGAGAAAGAACTCCCTGGATTTGAATTTTATTCCTATGTACTAGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | TTCAATTGTATCCTCCCTTTATACCCAGCCTATTTCAGAAGACAAAATAAAGGAGACAAGCACGGGGCCTaGAGGGGTCTGCAGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: FNCILPLYPAYFRRQNKGDKHGA*RGLQQV Trigger: GACCTGCTGCAGACCCCTGCAGGCCCCGTGCTTGTC...TCCTTTATTTTGTCTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | TACTCTTGGGACGCTTTTCATCCTCCTGGGTTGCCCTGTGCAGATTGGATTGGATCCCACGATAGACAGTaGATTTTGTTGGGGCATAAA | + |
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Preference number: 2 (lower is better) Translates to: YSWDAFHPPGLPCADWIGSHDRQ*ILLGHK Trigger: TTTATGCCCCAACAAAATCCACTGTCTATCGTGGGA...TCCAATCCAATCTGCACAGGGCAACCCAGGAGGATGAAAAGCGTCCCAAGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | AAACTACTCTGTGGAAGTCAGGGAGGAAAGATTGTAGACGACAGGGAGGATGGATTGCCCTGTGCAGATTaGATTGGAGGGCTTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: KLLCGSQGGKIVDDREDGLPCAD*IGGLLH Trigger: ATGCAAAAGCCCTCCAATCCAATCTGCACAGGGCAA...TCCATCCTCCCTGTCGTCTACAATCTTTCCTCCCTGACTTCCACAGAGTAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | CATAAGGTCTACTACCCGTTAATAGCAGCATCCCAGCTCTGTTCTCTCCATTCCACTTCCTTTCCCCAGTaGTCTCCAGACTGTGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: HKVYYPLIAASQLCSLHSTSFPQ*SPDCVK Trigger: TTTGACACAGTCTGGAGACCACTGGGGAAAGGAAGT...GGAATGGAGAGAACAGAGCTGGGATGCTGCTATTAACGGGTAGTAGACCTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | CATAAGGTCTACTACCCGTTAATAGCAGCATCCCAGCTCTGTTCTCTCCATTCCACACACACGCTACCATaGGTTACCATGATTACTACC | + |
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Preference number: 2 (lower is better) Translates to: HKVYYPLIAASQLCSLHSTHTLP*VTMITT Trigger: GGTAGTAATCATGGTAACCCATGGTAGCGTGTGTGT...GGAATGGAGAGAACAGAGCTGGGATGCTGCTATTAACGGGTAGTAGACCTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | AAGATTGTAGACGACAGGGAGGATGGAAGACACCAGGAGAACATGGCCTACAGACAGTGTGTCCTTCCTTaGGTGCAATTTGAAAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: KIVDDREDGRHQENMAYRQCVLP*VQFESN Trigger: GTTACTTTCAAATTGCACCCAAGGAAGGACACACTG...TCTGTAGGCCATGTTCTCCTGGTGTCTTCCATCCTCCCTGTCGTCTACAATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGATTGTAGACGACAGGGAGGATGGAAGACACCAGGAGAACATGGCCTATCCCACGATAGACAGTaGATTTTGTTGGGGCATAAA | + |
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Preference number: 2 (lower is better) Translates to: RKDCRRQGGWKTPGEHGLSHDRQ*ILLGHK Trigger: TTTATGCCCCAACAAAATCCACTGTCTATCGTGGGA...TAGGCCATGTTCTCCTGGTGTCTTCCATCCTCCCTGTCGTCTACAATCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR TCA 90 bp | TCTAGAAAATTCCTCATTGAGACTCTTCCTCCCCCAGGTGATCCTAGGCGTGTCTACCATGGGTTACCATaGTTACTACCAGATCAAACA | + |
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Preference number: 2 (lower is better) Translates to: SRKFLIETLPPPGDPRRVYHGLP*LLPDQT Trigger: TGTTTGATCTGGTAGTAATCATGGTAACCCATGGTA...GACACGCCTAGGATCACCTGGGGGAGGAAGAGTCTCAATGAGGAATTTTCTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | TTGTTATCAGTTCCATTCCACACAGGGTATGGTGGAAATTTAACAGATAGGATCTCCTGGGTTGCCCTGTaGAGATTGGATTGGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LLSVPFHTGYGGNLTDRISWVAL*RLDWRA Trigger: AGCCCTCCAATCCAATCTGCACAGGGCAACCCAGGA...GATCCTATCTGTTAAATTTCCACCATACCCTGTGTGGAATGGAACTGATAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | CATAAGGTCTACTACCCGTTAATAGCAGCATCCCAGCTCTGTTCTCTCCATTCCCAGTGTGTCCTTCCTTaGGTGCAATTTGAAAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: HKVYYPLIAASQLCSLHSQCVLP*VQFESN Trigger: GTTACTTTCAAATTGCACCCAAGGAAGGACACACTG...GGAATGGAGAGAACAGAGCTGGGATGCTGCTATTAACGGGTAGTAGACCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR GCA 90 bp | TCTAGAAAATTCCTCATTGAGACTCTTCCTCCCCCAGGTGATCCTAGGCGTGTCGGATTGGAGGGCTTTTaGATTGTCTTAATGTATCTT | + |
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Preference number: 2 (lower is better) Translates to: SRKFLIETLPPPGDPRRVGLEGF*IVLMYL Trigger: AAGATACATTAAGACAATGCAAAAGCCCTCCAATCC...GACACGCCTAGGATCACCTGGGGGAGGAAGAGTCTCAATGAGGAATTTTCTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | TACTCTTGGGACGCTTTTCATCCTCCTGGGTTGCCCTGTGCAGATTGGATTGGAAGAGAAAATTGTGGTTaGGATGTAATGTATGAGATG | + |
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Preference number: 2 (lower is better) Translates to: YSWDAFHPPGLPCADWIGRENCG*DVMYEM Trigger: CATCTCATACATTACATCCCAACCACAATTTTCTCT...TCCAATCCAATCTGCACAGGGCAACCCAGGAGGATGAAAAGCGTCCCAAGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | CTCATTGAGATCAGCCTCTCTGAGCTACTCTCCCATATATGTTCAGAGGTATATACATGGATGTCAAGCTaGAGGTCCCTGAAGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LIEISLSELLSHICSEVYTWMSS*RSLKFA Trigger: AGCAAACTTCAGGGACCTCCAGCTTGACATCCATGT...ATATACCTCTGAACATATATGGGAGAGTAGCTCAGAGAGGCTGATCTCAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTTTATGTTTTTGTGAAACTCCAAACAATGGGAGTGGGCGACTCTCTGATAGGCCTGCTCTTTTCTaGAGGGAAAATGAGAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LALCFCETPNNGSGRLSDRPALF*RENESG Trigger: TCCACTCTCATTTTCCCTTCAGAAAAGAGCAGGCCT...ATCAGAGAGTCGCCCACTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR TCA 90 bp | CCACCCTTTCAATTGTATCCTCCCTTTATACCCAGCCTATTTCAGAAGACAAAAAGGCCTGCTCTTTTCTaGAGGGAAAATGAGAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: PPFQLYPPFIPSLFQKTKRPALF*RENESG Trigger: TCCACTCTCATTTTCCCTTCAGAAAAGAGCAGGCCT...TTTTGTCTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAAAGGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | TTAGCTTTATGTTTTTGTGAAACTCCAAACAATGGGAGTGGGCGACTCTCTGATTTGCCCTGTGCAGATTaGATTGGAGGGCTTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LALCFCETPNNGSGRLSDLPCAD*IGGLLH Trigger: ATGCAAAAGCCCTCCAATCCAATCTGCACAGGGCAA...ATCAGAGAGTCGCCCACTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | TCGCTAGTACATAGGAATAAAATTCAAATCCAGGGAGTTCTTTCTCCGGTCTCTACTTCCTTTCCCCAGTaGTCTCCAGACTGTGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SLVHRNKIQIQGVLSPVSTSFPQ*SPDCVK Trigger: TTTGACACAGTCTGGAGACCACTGGGGAAAGGAAGT...AGAGACCGGAGAAAGAACTCCCTGGATTTGAATTTTATTCCTATGTACTAGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR-3UTR CCA 90 bp | CTCATTGAGATCAGCCTCTCTGAGCTACTCTCCCATATATGTTCAGAGGTATATCTGTCATTAATGACATaGATGTCAAGCTGGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LIEISLSELLSHICSEVYLSLMT*MSSWRS Trigger: GGACCTCCAGCTTGACATCCATGTCATTAATGACAG...ATATACCTCTGAACATATATGGGAGAGTAGCTCAGAGAGGCTGATCTCAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTTTCAATTGTATCCTCCCTTTATACCCAGCCTATTTCAGAAGACAAAATCTTTTGCCTACTCTTaGGACGCTTTTCATCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PPFQLYPPFIPSLFQKTKSFAYS*DAFHPP Trigger: AGGAGGATGAAAAGCGTCCCAAGAGTAGGCAAAAGA...TTTTGTCTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAAAGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR GCA 90 bp | TTAGCTTTATGTTTTTGTGAAACTCCAAACAATGGGAGTGGGCGACTCTCTGATTTTCCGTATCATGGCTaGAGTTTAAGGACAGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: LALCFCETPNNGSGRLSDFPYHG*SLRTEH Trigger: ATGCTCTGTCCTTAAACTGCAGCCATGATACGGAAA...ATCAGAGAGTCGCCCACTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CCA 90 bp | TTCAATTGTATCCTCCCTTTATACCCAGCCTATTTCAGAAGACAAAATAAAGGAGACACCAGGAGAACATaGCCTACAGAGTCAGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: FNCILPLYPAYFRRQNKGDTRRT*PTESAK Trigger: CTTAGCTGACTCTGTAGGCCATGTTCTCCTGGTGTC...TCCTTTATTTTGTCTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTGAGATCAGCCTCTCTGAGCTACTCTCCCATATATGTTCAGAGGTATATAAGAAAACTACTCTGTaGAAGTCAGGGAGGAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LIEISLSELLSHICSEVYKKTTL*KSGRKD Trigger: ATCTTTCCTCCCTGACTTCCACAGAGTAGTTTTCTT...ATATACCTCTGAACATATATGGGAGAGTAGCTCAGAGAGGCTGATCTCAATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCTTTATGTTTTTGTGAAACTCCAAACAATGGGAGTGGGCGACTCTCTGATTACCATGGGTTACCATaGTTACTACCAGATCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LALCFCETPNNGSGRLSDYHGLP*LLPDQT Trigger: TGTTTGATCTGGTAGTAATCATGGTAACCCATGGTA...ATCAGAGAGTCGCCCACTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTTGTTTTTGTAGTATGGCTCAGCCCTTTGTACATACCTTTAATCTCTCTGACACACACGCTACCATaGGTTACCATGATTACTACC | + |
|
Preference number: 2 (lower is better) Translates to: VFVFVVWLSPLYIPLISLTHTLP*VTMITT Trigger: GGTAGTAATCATGGTAACCCATGGTAGCGTGTGTGT...CAGAGAGATTAAAGGTATGTACAAAGGGCTGAGCCATACTACAAAAACAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR CAA 90 bp | TTAGTTTATCGATGCTGTTGTGATAAAATACCCTTCAAAAGCAACTaGGGAGAGACAGGGTTTATTGTAGGTAACAACTCCAGGTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: LVYRCCCDKIPFKSN*GETGFIVGNNSRLQ Trigger: CTGTAACCTGGAGTTGTTACCTACAATAAACCCTGTCTCTCCCAAGTTGCTTTTGAAGGGTATTTTATCACAACAGCATCGATAAACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR-3UTR TCA 90 bp | TCGCTAGTACATAGGAATAAAATTCAAATCCAGGGAGTTCTTTCTCCGGTCTCTAGCTTTATGTTTTTGTaGAACTCCAAACAATGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLVHRNKIQIQGVLSPVSSFMFL*NSKQWE Trigger: CTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCT...AGAGACCGGAGAAAGAACTCCCTGGATTTGAATTTTATTCCTATGTACTAGCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGAAATGAACATTGGTGGTCGGCTGACTTTTTCCACTTTACTTTTTATTCAGTGTCCTTCCTTGGGTaGAATTTGAAAGTAACACCT | + |
|
Preference number: 2 (lower is better) Translates to: ERNEHWWSADFFHFTFYSVSFLG*NLKVTP Trigger: AGGTGTTACTTTCAAATTGCACCCAAGGAAGGACAC...TGAATAAAAAGTAAAGTGGAAAAAGTCAGCCGACCACCAATGTTCATTTCTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR-3UTR GCA 90 bp | TTAGCTTTATGTTTTTGTGAAACTCCAAACAATGGGAGTGGGCGACTCTCTGATGGATTGGAGGGCTTTTaGATTGTCTTAATGTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: LALCFCETPNNGSGRLSDGLEGF*IVLMYL Trigger: AAGATACATTAAGACAATGCAAAAGCCCTCCAATCC...ATCAGAGAGTCGCCCACTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCTTTCTCCGGTCTCTCCACTTCAGTAATACTGACAGCAAAGGCTATACAAAGAGAAAATTGTGGTTaGGATGTAATGTATGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: SSFSGLSTSVILTAKAIQRENCG*DVMYEM Trigger: CATCTCATACATTACATCCCAACCACAATTTTCTCT...TTGTATAGCCTTTGCTGTCAGTATTACTGAAGTGGAGAGACCGGAGAAAGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR GCA 90 bp | TTCAATTGTATCCTCCCTTTATACCCAGCCTATTTCAGAAGACAAAATAAAGGATTTCCGTATCATGGCTaGAGTTTAAGGACAGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: FNCILPLYPAYFRRQNKGFPYHG*SLRTEH Trigger: ATGCTCTGTCCTTAAACTGCAGCCATGATACGGAAA...TCCTTTATTTTGTCTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR GCA 90 bp | CCACCCTTTCAATTGTATCCTCCCTTTATACCCAGCCTATTTCAGAAGACAAAATTACAATGTTTACGCTaGTTTCAGATCTCTCCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: PPFQLYPPFIPSLFQKTKLQCLR*FQISPN Trigger: ATTAGGAGAGATCTGAAAGCAGCGTAAACATTGTAA...TTTTGTCTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAAAGGGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR GCA 90 bp | TCGCTAGTACATAGGAATAAAATTCAAATCCAGGGAGTTCTTTCTCCGGTCTCTTTACAATGTTTACGCTaGTTTCAGATCTCTCCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SLVHRNKIQIQGVLSPVSLQCLR*FQISPN Trigger: ATTAGGAGAGATCTGAAAGCAGCGTAAACATTGTAA...AGAGACCGGAGAAAGAACTCCCTGGATTTGAATTTTATTCCTATGTACTAGCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR CCA 72 bp | CCAGCAGCAACTTCTGCCCCCACTTCCTTTCCCCAGTaGTCTCCAGACTGTGTCAAAGTTCTCCAGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PAATSAPTSFPQ*SPDCVKVLQEA Trigger: AGCCTCCTGGAGAACTTTGACACAGTCTGGAGACCACTGGGGAAAGGAAGTGGGGGCAGAAGTTGCTGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAACTTCTGCCCCCACTTCCTTTCCCCAGTGGTCTCCAGACTGTGTCAAAGCCTGTGCAGATTGGATaGGAGGGCTTTTGCATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QQLLPPLPFPSGLQTVSKPVQIG*EGFCIV Trigger: GACAATGCAAAAGCCCTCCAATCCAATCTGCACAGG...CTTTGACACAGTCTGGAGACCACTGGGGAAAGGAAGTGGGGGCAGAAGTTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAAAATTCCTCATTGAGACTCTTCCTCCCCCAGGTGATCCTAGGCGTGTCGTTGCCCTGTGCAGATaGGATTGGAGGGCTTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SRKFLIETLPPPGDPRRVVALCR*DWRAFA Trigger: TGCAAAAGCCCTCCAATCCAATCTGCACAGGGCAAC...GACACGCCTAGGATCACCTGGGGGAGGAAGAGTCTCAATGAGGAATTTTCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR GCA 72 bp | TTGCCTACTCTTGGGACGCTTTTCATCCTCCTGGGTTaGCCTGTGCAGATTGGATTGGAGGGCTTTTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: LPTLGTLFILLG*PVQIGLEGFCI Trigger: AATGCAAAAGCCCTCCAATCCAATCTGCACAGGGCAACCCAGGAGGATGAAAAGCGTCCCAAGAGTAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR CCA 72 bp | AAGTCAGGGAGGAAAGATTGTAGACGACAGGGAGGATaGAAGACACCAGGAGAACATGGCCTACAGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KSGRKDCRRQGG*KTPGEHGLQSQ Trigger: CTGACTCTGTAGGCCATGTTCTCCTGGTGTCTTCCATCCTCCCTGTCGTCTACAATCTTTCCTCCCTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CAA 90 bp | AAACTACTCTGTGGAAGTCAGGGAGGAAAGATTGTAGACGACAGGGAGGATGGAGTTGCCCTGTGCAGATaGGATTGGAGGGCTTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KLLCGSQGGKIVDDREDGVALCR*DWRAFA Trigger: TGCAAAAGCCCTCCAATCCAATCTGCACAGGGCAAC...TCCATCCTCCCTGTCGTCTACAATCTTTCCTCCCTGACTTCCACAGAGTAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAACCTTACCCATCACATCCACAGTCCAGAGCAGAGAGGAAATCAATGCAGGCTTTCATCCTCCTGGGTaGCCCTGTGCAGATTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: TTLPITSTVQSREEINAGFHPPG*PCADWI Trigger: AATCCAATCTGCACAGGGCAACCCAGGAGGATGAAA...GCCTGCATTGATTTCCTCTCTGCTCTGGACTGTGGATGTGATGGGTAAGGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAACTTCTGCCCCCACTTCCTTTCCCCAGTGGTCTCCAGACTGTGTCAAAGTTCCTTGGGTGCAATTaGAAAGTAACACCTTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: QQLLPPLPFPSGLQTVSKFLGCN*KVTPFN Trigger: ATTGAAAGGTGTTACTTTCAAATTGCACCCAAGGAA...CTTTGACACAGTCTGGAGACCACTGGGGAAAGGAAGTGGGGGCAGAAGTTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR GCA 72 bp | TTCACAGACACACATAAAGCTGCTTTAAGCCAGCTTTaGGGAGGGAGAGTTTTGAGTGCCAGACTGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FTDTHKAALSQL*GGRVLSARLEE Trigger: TTCTTCCAGTCTGGCACTCAAAACTCTCCCTCCGCAAAGCTGGCTTAAAGCAGCTTTATGTGTGTCTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR GCA 72 bp | AGAGAGCAGTGCACCCCATCATTCTTCCTGTCTTCCTaGTATGTTCCACTGTACATCCTTTCAAACAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: REQCTPSFFLSS*YVPLYILSNSE Trigger: CTCACTGTTTGAAAGGATGTACAGTGGAACATAGCAGGAAGACAGGAAGAATGATGGGGTGCACTGCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR CCA 72 bp | GACGCTTTTCATCCTCCTGGGTTGCCCTGTGCAGATTaGATTGGAGGGCTTTTGCATTGTCTTAATGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: DAFHPPGLPCAD*IGGLLHCLNVS Trigger: AGATACATTAAGACAATGCAAAAGCCCTCCAATCCAATCTGCACAGGGCAACCCAGGAGGATGAAAAGCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR CCA 72 bp | TCGGCTGACTTTTTCCACTTTACTTTTTATTCAGTCTaGGAGCCTGTGAAGGGATGCTGCCCATCTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SADFFHFTFYSV*EPVKGCCPSSG Trigger: TCCTGAAGATGGGCAGCATCCCTTCACAGGCTCCCAGACTGAATAAAAAGTAAAGTGGAAAAAGTCAGCCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAGATTGTAGACGACAGGGAGGATGGAAGACACCAGGAGAACATGGCCTATGGAAGGAGAGAAAATaGTGGTTGGGATGTAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: RKDCRRQGGWKTPGEHGLWKERK*WLGCNV Trigger: TACATTACATCCCAACCACAATTTTCTCTCCTTCCA...TAGGCCATGTTCTCCTGGTGTCTTCCATCCTCCCTGTCGTCTACAATCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTGAGATCAGCCTCTCTGAGCTACTCTCCCATATATGTTCAGAGGTATATGTTTCCTGTTGCTTCTaGGAGGCCTGCTCTTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LIEISLSELLSHICSEVYVSCCF*EACSFL Trigger: CAGAAAAGAGCAGGCCTCCAAGAAGCAACAGGAAAC...ATATACCTCTGAACATATATGGGAGAGTAGCTCAGAGAGGCTGATCTCAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR TCA 72 bp | CACACACACACACACACACGCTACCATGGGTTACCATaGTTACTACCAGATCAAACACCCCAGGAATACATA | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTRYHGLP*LLPDQTPQEYI Trigger: TATGTATTCCTGGGGTGTTTGATCTGGTAGTAATCATGGTAACCCATGGTAGCGTGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR GCA 72 bp | AATGACATGGATGTCAAGCTGGAGGTCCCTGAAGTTTaGTCTCATAGAATGAACTACATCACTGGTAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NDMDVKLEVPEV*SHRMNYITGRP Trigger: AGGCCTACCAGTGATGTAGTTCATTCTATGAGAGCAAACTTCAGGGACCTCCAGCTTGACATCCATGTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR-3UTR CAA 90 bp | CCACCCTTTCAATTGTATCCTCCCTTTATACCCAGCCTATTTCAGAAGACAAAAGTTTCCTGTTGCTTCTaGGAGGCCTGCTCTTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPFQLYPPFIPSLFQKTKVSCCF*EACSFL Trigger: CAGAAAAGAGCAGGCCTCCAAGAAGCAACAGGAAAC...TTTTGTCTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAAAGGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR TCA 72 bp | TTTTCCACTTTACTTTTTATTCAGTCTGGGAGCCTGTaGAGGGATGCTGCCCATCTTCAGGATAAGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FSTLLFIQSGSL*RDAAHLQDKPH Trigger: ATGAGGCTTATCCTGAAGATGGGCAGCATCCCTTCACAGGCTCCCAGACTGAATAAAAAGTAAAGTGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTATCAGTTCCATTCCACACAGGGTATGGTGGAAATTTAACAGATAGGATCCCTGTGCAGATTGGATaGGAGGGCTTTTGCATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLSVPFHTGYGGNLTDRIPVQIG*EGFCIV Trigger: GACAATGCAAAAGCCCTCCAATCCAATCTGCACAGG...GATCCTATCTGTTAAATTTCCACCATACCCTGTGTGGAATGGAACTGATAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR TCA 72 bp | GTAGGAGCCGTACACAAAGACAATACAGAAATGAGCTaGAGTCTTTTGTTTATTAGCTACACCTGCCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VGAVHKDNTEMS*SLLFISYTCPV Trigger: GACTGGGCAGGTGTAGCTAATAAACAAAAGACTTCAGCTCATTTCTGTATTGTCTTTGTGTACGGCTCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR GCA 72 bp | ATGAAGAACAGAGCTACTGTGATAAACCTGGTTATGTaGTTCACAGACACACATAAAGCTGCTTTAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: MKNRATVINLVM*FTDTHKAALSQ Trigger: CTGGCTTAAAGCAGCTTTATGTGTGTCTGTGAAGCACATAACCAGGTTTATCACAGTAGCTCTGTTCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR-3UTR CAA 90 bp | TTAGCTTTATGTTTTTGTGAAACTCCAAACAATGGGAGTGGGCGACTCTCTGATTGGAAGGAGAGAAAATaGTGGTTGGGATGTAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LALCFCETPNNGSGRLSDWKERK*WLGCNV Trigger: TACATTACATCCCAACCACAATTTTCTCTCCTTCCA...ATCAGAGAGTCGCCCACTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR GCA 72 bp | TCATTACTGGCTACACCCACTGCCTTAGTTTATCGATaGTGTTGTGATAAAATACCCTTCAAAAGCAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLLATPTALVYR*CCDKIPFKSNL Trigger: CAAGTTGCTTTTGAAGGGTATTTTATCACAACAGCATCGATAAACTAAGGCAGTGGGTGTAGCCAGTAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR CCA 72 bp | CTTTGCAGTCAGGAGTCAGAGAGAAATGAACATTGGTaGTCGGCTGACTTTTTCCACTTTACTTTTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LCSQESERNEHW*SADFFHFTFYS Trigger: TGAATAAAAAGTAAAGTGGAAAAAGTCAGCCGACCACCAATGTTCATTTCTCTCTGACTCCTGACTGCAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR CCA 72 bp | TGTCTTTGCAGTCAGGAGTCAGAGAGAAATGAACATTaGTGGTCGGCTGACTTTTTCCACTTTACTTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: CLCSQESERNEH*WSADFFHFTFY Trigger: ATAAAAAGTAAAGTGGAAAAAGTCAGCCGACCACCAATGTTCATTTCTCTCTGACTCCTGACTGCAAAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR GCA 72 bp | TTTTGTTGGGGCATAAACAGTGTGTCCTTCCTTGGGTaGAATTTGAAAGTAACACCTTTCAATAACCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: FCWGINSVSFLG*NLKVTPFNNLF Trigger: AAATAGGTTATTGAAAGGTGTTACTTTCAAATTGCACCCAAGGAAGGACACACTGTTTATGCCCCAACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| 3UTR GCA 72 bp | GGTATTTTGTCACAGCAACAAGAAACTTTAGAATACTaGTATGAAGAACAGAGCTACTGTGATAAACCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GILSQQQETLEY*YEEQSYCDKPG Trigger: ACCAGGTTTATCACAGTAGCTCTGTTCTTCATAGCAGTATTCTAAAGTTTCTTGTTGCTGTGACAAAATACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| 3UTR TCA 72 bp | CACACCTCCATACTAATGCTCATATATATATATATCTaGGAGCTGAAAACAATGAAGCTCTTGGAAAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: HTSILMLIYIYI*ELKTMKLLENC Trigger: GCAGTTTTCCAAGAGCTTCATTGTTTTCAGCTCTCAGATATATATATATATGAGCATTAGTATGGAGGTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| CDS-3UTR GCA 90 bp | GGACAGAGCATCACAACAAAATTACCTAAAACACACGCTCGCGCGCGCTTGCACTGTCGGGTAAGGCATTaGGGCGGCCTGCCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQSITTKLPKTHARARLHCRVRH*GGLPLL Trigger: CAGCAAGGGCAGGCCGCCGCAATGCCTTACCCGACA...GTGCAAGCGCGCGCGAGCGTGTGTTTTAGGTAATTTTGTTGTGATGCTCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| CDS-3UTR GCA 90 bp | TCTAGAAAATTCCTCATTGAGACTCTTCCTCCCCCAGGTGATCCTAGGCGTGTCTGTCGGGTAAGGCATTaGGGCGGCCTGCCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRKFLIETLPPPGDPRRVCRVRH*GGLPLL Trigger: CAGCAAGGGCAGGCCGCCGCAATGCCTTACCCGACA...GACACGCCTAGGATCACCTGGGGGAGGAAGAGTCTCAATGAGGAATTTTCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| CDS-3UTR CCA 90 bp | GGGACAAGCACGGGGCCTGCAGGGGTCTGCAGCAGGTCTTCTGCATATATGTTGGTAGCCAGTGAACTCTaGATGTCGGGTAAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSTGPAGVCSRSSAYMLVASEL*MSGKAL Trigger: CAATGCCTTACCCGACATCCAGAGTTCACTGGCTAC...CAACATATATGCAGAAGACCTGCTGCAGACCCCTGCAGGCCCCGTGCTTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
||
| CDS-3UTR TCA 90 bp | TTCAGTCTGGGAGCCTGTGAAGGGATGCTGCCCATCTTCAGGATAAGCCTCATTAGGACGCAAAGCTGGTaGTCACAGATTCCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLGACEGMLPIFRISLIRTQSW*SQIPHQ Trigger: CTGATGTGGAATCTGTGATCACCAGCTTTGCGTCCT...AATGAGGCTTATCCTGAAGATGGGCAGCATCCCTTCACAGGCTCCCAGACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
||
| CDS-3UTR TCA 90 bp | TACTCTTGGGACGCTTTTCATCCTCCTGGGTTGCCCTGTGCAGATTGGATTGGAAGGACGCAAAGCTGGTaGTCACAGATTCCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSWDAFHPPGLPCADWIGRTQSW*SQIPHQ Trigger: CTGATGTGGAATCTGTGATCACCAGCTTTGCGTCCT...TCCAATCCAATCTGCACAGGGCAACCCAGGAGGATGAAAAGCGTCCCAAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CCA 90 bp | GGACAGAGCATCACAACAAAATTACCTAAAACACACGCTCGCGCGCGCTTGCACGTAGCCAGTGAACTCTaGATGTCGGGTAAGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: GQSITTKLPKTHARARLHVASEL*MSGKAL Trigger: CAATGCCTTACCCGACATCCAGAGTTCACTGGCTAC...GTGCAAGCGCGCGCGAGCGTGTGTTTTAGGTAATTTTGTTGTGATGCTCTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CCA 90 bp | TTCAGTCTGGGAGCCTGTGAAGGGATGCTGCCCATCTTCAGGATAAGCCTCATTGTAGCCAGTGAACTCTaGATGTCGGGTAAGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: FSLGACEGMLPIFRISLIVASEL*MSGKAL Trigger: CAATGCCTTACCCGACATCCAGAGTTCACTGGCTAC...AATGAGGCTTATCCTGAAGATGGGCAGCATCCCTTCACAGGCTCCCAGACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| 3UTR CAA 72 bp | TTTGCCTACTCTTGGGACGCTTTTCATCCTCCTGGGTaGCCCTGTGCAGATTGGATTGGAGGGCTTTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: FAYSWDAFHPPG*PCADWIGGLLH Trigger: ATGCAAAAGCCCTCCAATCCAATCTGCACAGGGCAACCCAGGAGGATGAAAAGCGTCCCAAGAGTAGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR GCA 90 bp | TTGTTATCAGTTCCATTCCACACAGGGTATGGTGGAAATTTAACAGATAGGATCTGTCGGGTAAGGCATTaGGGCGGCCTGCCCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLSVPFHTGYGGNLTDRICRVRH*GGLPLL Trigger: CAGCAAGGGCAGGCCGCCGCAATGCCTTACCCGACA...GATCCTATCTGTTAAATTTCCACCATACCCTGTGTGGAATGGAACTGATAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CCA 90 bp | TTACTACCAGATCAAACACCCCAGGAATACATAGCTGCTATGTCTTTCAATGAGATCTTGCTGGGCTTCTaGGCTGCTGCCGCCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLPDQTPQEYIAAMSFNEILLGF*AAAASH Trigger: ATGGGAGGCGGCAGCAGCCCAGAAGCCCAGCAAGAT...CTCATTGAAAGACATAGCAGCTATGTATTCCTGGGGTGTTTGATCTGGTAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS-3UTR GCA 90 bp | TCGCTAGTACATAGGAATAAAATTCAAATCCAGGGAGTTCTTTCTCCGGTCTCTTGCTGCCGCCTCCCATaGTGGTCTCCTTTGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLVHRNKIQIQGVLSPVSCCRLP*WSPLFS Trigger: AGAAAACAAAGGAGACCAGCATGGGAGGCGGCAGCA...AGAGACCGGAGAAAGAACTCCCTGGATTTGAATTTTATTCCTATGTACTAGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS-3UTR GCA 90 bp | TTAGCTTTATGTTTTTGTGAAACTCCAAACAATGGGAGTGGGCGACTCTCTGATCTCATCACAGAATCTTaGTGGGCTTCTGGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LALCFCETPNNGSGRLSDLITES*WASGLL Trigger: CAGCAGCCCAGAAGCCCAGCAAGATTCTGTGATGAG...ATCAGAGAGTCGCCCACTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS-3UTR TCA 90 bp | TTACTACCAGATCAAACACCCCAGGAATACATAGCTGCTATGTCTTTCAATGAGAGGACGCAAAGCTGGTaGTCACAGATTCCACATCAG | + |
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Preference number: 4 (lower is better) Translates to: LLPDQTPQEYIAAMSFNERTQSW*SQIPHQ Trigger: CTGATGTGGAATCTGTGATCACCAGCTTTGCGTCCT...CTCATTGAAAGACATAGCAGCTATGTATTCCTGGGGTGTTTGATCTGGTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR CAA 72 bp | ACTCTTCCTCCCCCAGGTGATCCTAGGCGTGTCAAGTaGCTGATAAAAACAAACCATCACACTCACTATAAA | + |
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Preference number: 4 (lower is better) Translates to: TLPPPGDPRRVK*LIKTNHHTHYK Trigger: TTTATAGTGAGTGTGATGGTTTGTTTTTATCAGCAACTTGACACGCCTAGGATCACCTGGGGGAGGAAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR CAA 72 bp | GGATTTAAGGTACAAGACCATCCTCCACCCTTTCAATaGTATCCTCCCTTTATACCCAGCCTATTTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GFKVQDHPPPFQ*YPPFIPSLFQK Trigger: CTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAAAGGGTGGAGGATGGTCTTGTACCTTAAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR CAA 72 bp | CGATGCTGTTGTGATAAAATACCCTTCAAAAGCAACTaGGGAGAGACAGGGTTTATTGTAGGTAACAACTCC | + |
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Preference number: 4 (lower is better) Translates to: RCCCDKIPFKSN*GETGFIVGNNS Trigger: GGAGTTGTTACCTACAATAAACCCTGTCTCTCCCAAGTTGCTTTTGAAGGGTATTTTATCACAACAGCATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| CDS-3UTR CCA 90 bp | TTACTACCAGATCAAACACCCCAGGAATACATAGCTGCTATGTCTTTCAATGAGGTTTTTGGTTGGCCTTaGTCTTTCTCTTCATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPDQTPQEYIAAMSFNEVFGWP*SFSSFF Trigger: GAAGAATGAAGAGAAAGACCAAGGCCAACCAAAAAC...CTCATTGAAAGACATAGCAGCTATGTATTCCTGGGGTGTTTGATCTGGTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR CAA 72 bp | TGGGGCATAAACAGTGTGTCCTTCCTTGGGTGCAATTaGAAAGTAACACCTTTCAATAACCTATTTCCGTAT | + |
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Preference number: 4 (lower is better) Translates to: WGINSVSFLGCN*KVTPFNNLFPY Trigger: ATACGGAAATAGGTTATTGAAAGGTGTTACTTTCAAATTGCACCCAAGGAAGGACACACTGTTTATGCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| 3UTR CAA 72 bp | TTGAGTGGCAGACAAAGTGATGAATCAGAGGAACATTaGACAGAACAAGAAATGCCCAAACTCTTACGAGAT | + |
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Preference number: 4 (lower is better) Translates to: LSGRQSDESEEH*TEQEMPKLLRD Trigger: ATCTCGTAAGAGTTTGGGCATTTCTTGTTCTGTCAAATGTTCCTCTGATTCATCACTTTGTCTGCCACTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| CDS-3UTR CCA 90 bp | GAGAGAAATGAACATTGGTGGTCGGCTGACTTTTTCCACTTTACTTTTTATTCAGTTTTTGGTTGGCCTTaGTCTTTCTCTTCATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERNEHWWSADFFHFTFYSVFGWP*SFSSFF Trigger: GAAGAATGAAGAGAAAGACCAAGGCCAACCAAAAAC...TGAATAAAAAGTAAAGTGGAAAAAGTCAGCCGACCACCAATGTTCATTTCTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| CDS-3UTR CAA 90 bp | AGAGCATCACAACAAAATTACCTAAAACACACGCTCGCGCGCGCTTGCACACACTGCGGCGGCCTGCCCTaGCTGAGGACGCAAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RASQQNYLKHTLARACTHCGGLP*LRTQSW Trigger: CCAGCTTTGCGTCCTCAGCAAGGGCAGGCCGCCGCA...GTGTGTGCAAGCGCGCGCGAGCGTGTGTTTTAGGTAATTTTGTTGTGATGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | GGACAGAGCATCACAACAAAATTACCTAAAACACACGCTCGCGCGCGCTTGCACATGTCGGGTAAGGCATaGCGGCGGCCTGCCCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GQSITTKLPKTHARARLHMSGKA*RRPALA Trigger: AGCAAGGGCAGGCCGCCGCAATGCCTTACCCGACAT...GTGCAAGCGCGCGCGAGCGTGTGTTTTAGGTAATTTTGTTGTGATGCTCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS CCA 90 bp | AGTTTCAGTGGAAGATCAGAGGATCCACTTGTAGCCAGTGAACTCTaGATGTCGGGTAAGGCATTGCGGCGGCCTGCCCTTGCTGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SFSGRSEDPLVASEL*MSGKALRRPALAED Trigger: GTCCTCAGCAAGGGCAGGCCGCCGCAATGCCTTACCCGACATCCAGAGTTCACTGGCTACAAGTGGATCCTCTGATCTTCCACTGAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 ENSMUST00000175852.2 ENSMUST00000177325.8 ENSMUST00000177473.8 |
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| CDS-3UTR CAA 90 bp | CACGGGGCCTGCAGGGGTCTGCAGCAGGTCTTCTGCATATATGTTGTGGCTTTTCCTCATCACAGAATCTaGCTGGGCTTCTGGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HGACRGLQQVFCIYVVAFPHHRI*LGFWAA Trigger: AGCAGCCCAGAAGCCCAGCAAGATTCTGTGATGAGG...AAAAGCCACAACATATATGCAGAAGACCTGCTGCAGACCCCTGCAGGCCCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | CATCCTCCACCCTTTCAATTGTATCCTCCCTTTATACCCAGCCTATTTCAGAAGTGCGGCGGCCTGCCCTaGCTGAGGACGCAAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPPPFQLYPPFIPSLFQKCGGLP*LRTQSW Trigger: CCAGCTTTGCGTCCTCAGCAAGGGCAGGCCGCCGCA...CTTCTGAAATAGGCTGGGTATAAAGGGAGGATACAATTGAAAGGGTGGAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | AAACTACTCTGTGGAAGTCAGGGAGGAAAGATTGTAGACGACAGGGAGGATGGAATGTCGGGTAAGGCATaGCGGCGGCCTGCCCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KLLCGSQGGKIVDDREDGMSGKA*RRPALA Trigger: AGCAAGGGCAGGCCGCCGCAATGCCTTACCCGACAT...TCCATCCTCCCTGTCGTCTACAATCTTTCCTCCCTGACTTCCACAGAGTAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS GCA 90 bp | CTGATGAATCTGTCCTCATCACAGAATCTTGCTGGGCTTCTGGGCTaGTGCCGCCTCCCATGCTGGTCTCCTTTGTTTTCTTTTGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LMNLSSSQNLAGLLG*CRLPCWSPLFSFDP Trigger: GGGGTCAAAAGAAAACAAAGGAGACCAGCATGGGAGGCGGCAGCAGCCCAGAAGCCCAGCAAGATTCTGTGATGAGGACAGATTCATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS GCA 90 bp | TCCACATCAGTCATCTCTGATGAATCTGTCCTCATCACAGAATCTTaGTGGGCTTCTGGGCTGCTGCCGCCTCCCATGCTGGTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: STSVISDESVLITES*WASGLLPPPMLVSF Trigger: AAAGGAGACCAGCATGGGAGGCGGCAGCAGCCCAGAAGCCCAGCAAGATTCTGTGATGAGGACAGATTCATCAGAGATGACTGATGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS CCA 90 bp | ACATCAGTCATCTCTGATGAATCTGTCCTCATCACAGAATCTTGCTaGGCTTCTGGGCTGCTGCCGCCTCCCATGCTGGTCTCCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TSVISDESVLITESC*ASGLLPPPMLVSFV Trigger: AACAAAGGAGACCAGCATGGGAGGCGGCAGCAGCCCAGAAGCCCAGCAAGATTCTGTGATGAGGACAGATTCATCAGAGATGACTGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | TTAGCTTTATGTTTTTGTGAAACTCCAAACAATGGGAGTGGGCGACTCTCTGATATGTCGGGTAAGGCATaGCGGCGGCCTGCCCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LALCFCETPNNGSGRLSDMSGKA*RRPALA Trigger: AGCAAGGGCAGGCCGCCGCAATGCCTTACCCGACAT...ATCAGAGAGTCGCCCACTCCCATTGTTTGGAGTTTCACAAAAACATAAAGCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | GGACAGAGCATCACAACAAAATTACCTAAAACACACGCTCGCGCGCGCTTGCACCTTCATTCTTCGTTTTaGCATCTTCCTTCACGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQSITTKLPKTHARARLHLHSSF*HLPSRP Trigger: TGGCCGTGAAGGAAGATGCAAAAACGAAGAATGAAG...GTGCAAGCGCGCGCGAGCGTGTGTTTTAGGTAATTTTGTTGTGATGCTCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | TACTCTTGGGACGCTTTTCATCCTCCTGGGTTGCCCTGTGCAGATTGGATTGGACTTCATTCTTCGTTTTaGCATCTTCCTTCACGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSWDAFHPPGLPCADWIGLHSSF*HLPSRP Trigger: TGGCCGTGAAGGAAGATGCAAAAACGAAGAATGAAG...TCCAATCCAATCTGCACAGGGCAACCCAGGAGGATGAAAAGCGTCCCAAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | CACGGGGCCTGCAGGGGTCTGCAGCAGGTCTTCTGCATATATGTTGTGGCTTTTTGTTTTTGGTTGGCCTaGGTCTTTCTCTTCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HGACRGLQQVFCIYVVAFCFWLA*VFLFIL Trigger: AAGAATGAAGAGAAAGACCAAGGCCAACCAAAAACA...AAAAGCCACAACATATATGCAGAAGACCTGCTGCAGACCCCTGCAGGCCCCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | AGAGCATCACAACAAAATTACCTAAAACACACGCTCGCGCGCGCTTGCACACACCATTTAGGGGTGTTTTaGGTTGGCCTTGGTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RASQQNYLKHTLARACTHHLGVF*VGLGLS Trigger: AGAAAGACCAAGGCCAACCAAAAACACCCCTAAATG...GTGTGTGCAAGCGCGCGCGAGCGTGTGTTTTAGGTAATTTTGTTGTGATGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | GTTATGTGCTTCACAGACACACATAAAGCTGCTTTAAGCCAGCTTTGCGGAGGGCATTTAGGGGTGTTTTaGGTTGGCCTTGGTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VMCFTDTHKAALSQLCGGHLGVF*VGLGLS Trigger: AGAAAGACCAAGGCCAACCAAAAACACCCCTAAATG...CCCTCCGCAAAGCTGGCTTAAAGCAGCTTTATGTGTGTCTGTGAAGCACATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075992.12 |
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| CDS-3UTR CAA 90 bp | CATAAGGTCTACTACCCGTTAATAGCAGCATCCCAGCTCTGTTCTCTCCATTCCCATTTAGGGGTGTTTTaGGTTGGCCTTGGTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKVYYPLIAASQLCSLHSHLGVF*VGLGLS Trigger: AGAAAGACCAAGGCCAACCAAAAACACCCCTAAATG...GGAATGGAGAGAACAGAGCTGGGATGCTGCTATTAACGGGTAGTAGACCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | AGAGCATCACAACAAAATTACCTAAAACACACGCTCGCGCGCGCTTGCACACACTGTTTTTGGTTGGCCTaGGTCTTTCTCTTCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RASQQNYLKHTLARACTHCFWLA*VFLFIL Trigger: AAGAATGAAGAGAAAGACCAAGGCCAACCAAAAACA...GTGTGTGCAAGCGCGCGCGAGCGTGTGTTTTAGGTAATTTTGTTGTGATGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | AAACTACTCTGTGGAAGTCAGGGAGGAAAGATTGTAGACGACAGGGAGGATGGATGTTTTTGGTTGGCCTaGGTCTTTCTCTTCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLLCGSQGGKIVDDREDGCFWLA*VFLFIL Trigger: AAGAATGAAGAGAAAGACCAAGGCCAACCAAAAACA...TCCATCCTCCCTGTCGTCTACAATCTTTCCTCCCTGACTTCCACAGAGTAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS-3UTR CAA 90 bp | AGTTCTTTCTCCGGTCTCTCCACTTCAGTAATACTGACAGCAAAGGCTATACAACTTCATTCTTCGTTTTaGCATCTTCCTTCACGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSFSGLSTSVILTAKAIQLHSSF*HLPSRP Trigger: TGGCCGTGAAGGAAGATGCAAAAACGAAGAATGAAG...TTGTATAGCCTTTGCTGTCAGTATTACTGAAGTGGAGAGACCGGAGAAAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075992.12 ENSMUST00000095668.10 |
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| CDS CCA 72 bp | GGAAGATCAGAGGATCCACTTGTAGCCAGTGAACTCTaGATGTCGGGTAAGGCATTGCGGCGGCCTGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GRSEDPLVASEL*MSGKALRRPAL Trigger: AAGGGCAGGCCGCCGCAATGCCTTACCCGACATCCAGAGTTCACTGGCTACAAGTGGATCCTCTGATCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066028.13 ENSMUST00000075992.12 ENSMUST00000095668.10 ENSMUST00000175852.2 ENSMUST00000177325.8 ENSMUST00000177473.8 |
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| CDS GCA 72 bp | CTGTCCTCATCACAGAATCTTGCTGGGCTTCTGGGCTaGTGCCGCCTCCCATGCTGGTCTCCTTTGTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSSQNLAGLLG*CRLPCWSPLFS Trigger: AGAAAACAAAGGAGACCAGCATGGGAGGCGGCAGCAGCCCAGAAGCCCAGCAAGATTCTGTGATGAGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS GCA 72 bp | GTCATCTCTGATGAATCTGTCCTCATCACAGAATCTTaGTGGGCTTCTGGGCTGCTGCCGCCTCCCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VISDESVLITES*WASGLLPPPML Trigger: CAGCATGGGAGGCGGCAGCAGCCCAGAAGCCCAGCAAGATTCTGTGATGAGGACAGATTCATCAGAGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS CCA 72 bp | ATCTCTGATGAATCTGTCCTCATCACAGAATCTTGCTaGGCTTCTGGGCTGCTGCCGCCTCCCATGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ISDESVLITESC*ASGLLPPPMLV Trigger: GACCAGCATGGGAGGCGGCAGCAGCCCAGAAGCCCAGCAAGATTCTGTGATGAGGACAGATTCATCAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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| CDS GCA 72 bp | TCCTCATCACAGAATCTTGCTGGGCTTCTGGGCTGCTaGCGCCTCCCATGCTGGTCTCCTTTGTTTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSQNLAGLLGC*RLPCWSPLFSF Trigger: AAAAGAAAACAAAGGAGACCAGCATGGGAGGCGGCAGCAGCCCAGAAGCCCAGCAAGATTCTGTGATGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095668.10 |
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