RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKHD1L1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038725

Ensembl transcript IDs: ENSMUST00000038336.12, ENSMUST00000166957.2, ENSMUST00000209244.2

Found 594 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTaGTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTCC +
Preference number: 1 (lower is better)
Translates to: LEHSVGLFLAVQPSS*CISSSPVLFSACSS
Trigger: GGAAGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGGCCACTGCTGCTGCTaGCACTACCCGGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSGHCCC*HYPGYF
Trigger: GAAGTAGCCCGGGTAGTGGCAGCAGCAGCAGTGGCC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCTCCATGCAGGCTCTTaGGTACAGTGTGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPLHAGS*VQCEGS
Trigger: GGACCCTTCACACTGTACTCAAGAGCCTGCATGGAG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTGGGCTGCCACTGGCTaGGCAACCACTGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSWAATG*ATTESE
Trigger: TTCACTCTCAGTGGTTGCTCAGCCAGTGGCAGCCCA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTGGTGCCCCCAGCAGTaGTGCCTCTCCTGGGAGATA +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCWCPQQ*CLSWEI
Trigger: TATCTCCCAGGAGAGGCAGCACTGCTGGGGGCACCA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCCGGGCTACTTCCACTaGCACCAGGGACACTCTGTG +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCPGYFH*HQGHSV
Trigger: CACAGAGTGTCCCTGGTGGCAGTGGAAGTAGCCCGG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTCCACAGAGGAGGCTTTaGTGTGGCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSPQRRL*CGHCCC
Trigger: GCAGCAGCAGTGGCCACAGCAAAGCCTCCTCTGTGG...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCCTGCATTTGCCGTATaGGTCAAGCGAGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPPAFAV*VKRVQT
Trigger: GGTCTGGACTCGCTTGACCCATACGGCAAATGCAGG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGACCATCACAAAGTTGTaGAACTGCAGGGCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPTITKL*NCRAPP
Trigger: CGGAGGGGCCCTGCAGTTCCACAACTTTGTGATGGT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCAGCCAGAATCAGTTaGTTGGGGGATGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQPARIS*LGDGTG
Trigger: ACCAGTCCCATCCCCCAACCAACTGATTCTGGCTGG...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGAGAAACCAGGTCCCTaGGAGCCACAGGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSEKPGP*EPQVSH
Trigger: ATGGGACACCTGTGGCTCTCAGGGACCTGGTTTCTC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGATCAGCCGAAGATTCTaGGGACTGGTCCCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPISRRF*GLVPVK
Trigger: CTTTACCGGGACCAGTCCTCAGAATCTTCGGCTGAT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGACCTTTGTGGGAATCTaGTGCACACCAAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPTFVGI*CTPKQP
Trigger: GGGCTGCTTTGGTGTGCAGCAGATTCCCACAAAGGT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTCTCTCCCAGCTGGGGTaGTACAGTAGACCTCACTGG +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSLSQLG*YSRPHW
Trigger: CCAGTGAGGTCTACTGTAGCACCCCAGCTGGGAGAG...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGAGCCAGGATCCTCTTaGTCTCAATGCCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPEPGSS*SQCQPH
Trigger: ATGAGGCTGGCATTGAGACCAAGAGGATCCTGGCTC...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTATGACAGCCAGTGTCTaGACAGGTGTCCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSMTASV*TGVPTE
Trigger: CTCTGTGGGGACACCTGTCCAGACACTGGCTGTCAT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTTGGGAAAGGGAACATaGGTTAGCTCCCACACACGG +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSLGKGT*VSSHTR
Trigger: CCGTGTGTGGGAGCTAACTCATGTTCCCTTTCCCAA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAAGCTGCAGTTGCTCTaGCATTGGGCAGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSKLQLL*HWAGTP
Trigger: TGGAGTGCCTGCCCAATGTCAGAGCAACTGCAGCTT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTGGACTTCCTCCCCATaGGGAGTTGGCAGACCAAAC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCWTSSP*GVGRPN
Trigger: GTTTGGTCTGCCAACTCCTCATGGGGAGGAAGTCCA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTGTAATAACGGCAAGTaGTCCTTCCTCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPCNNGK*SFLWWW
Trigger: CCACCACCAGAGGAAGGATCACTTGCCGTTATTACA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGGAATAGGCAGACCGTaGAGATCCAGTGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSGIGRP*RSSVPS
Trigger: TGAGGGCACACTGGATCTTCACGGTCTGCCTATTCC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGAGAACCAGGCCTTTTaGAGTGCAAAATGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPENQAF*SAKCGS
Trigger: GGACCCACATTTTGCACTTCAAAAGGCCTGGTTCTC...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTATCTACTGCCTTTACTaGGGGCTGCTGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSIYCLY*GLLRKG
Trigger: CCCTTTCCTCAGCAGCCCTCAGTAAAGGCAGTAGAT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCTGTTCTGTGAGGAGTaGGGTCTGTATAGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSLFCEE*GLYSWP
Trigger: GGGCCAACTATACAGACCTCACTCCTCACAGAACAG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTGGGTGCCACCTTCAGTaGTGCCTTTTGATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSGCHLQ*CLLMVR
Trigger: TCTCACCATCAAAAGGCAGCACTGAAGGTGGCACCC...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGCAAACTGCAAGTCTaGAGCTGGCACAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSSKLQV*SWHSSR
Trigger: CCTGCTGCTGTGCCAGCTGCAGACTTGCAGTTTGCT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTCGTTCCACCAGCAATaGTTCCAGAGGTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPSFHQQ*FQRLVR
Trigger: TCTCACCAACCTCTGGAAGCATTGCTGGTGGAACGA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTTGCCCCCAGCAGTGCTaGCTCTCCTGGGAGATATTT +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSCPQQC*LSWEIF
Trigger: AAATATCTCCCAGGAGAGGCAGCACTGCTGGGGGCA...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCATCTGATGCTCCATaGATAGCCAGCACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSPSDAP*IASTGS
Trigger: GGAACCTGTGCTGGCTATTCATGGAGCATCAGATGG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGAAACCCACAGTCACCTaGACATTTGGCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPKPTVT*TFGWNS
Trigger: GGAATTCCAGCCAAATGTTCAGGTGACTGTGGGTTT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTCCGGGACTGGAGACTaGGAAAATTCTGTACCCTAT +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQSGTGD*ENSVPY
Trigger: ATAGGGTACAGAATTTTCTCAGTCTCCAGTCCCGGA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTACCAAAAGCCAAAGTaGGTGCCCCCAGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCYQKPK*VPPAAA
Trigger: TGCGGCTGCTGGGGGCACTCACTTTGGCTTTTGGTA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGACACAGTCAGGCCTTaGCTAAATGGGAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSDTVRP*LNGRTR
Trigger: CCTGGTTCTCCCATTTAGTCAAGGCCTGACTGTGTC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTCAGAGCCATCCACCCTaGCATATGGGTCAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSQSHPP*HMGQSF
Trigger: AAACGACTGACCCATATGTCAGGGTGGATGGCTCTG...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTTGCATTGTAACTCATaGTCCCGGCATGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSLHCNS*SRHEAS
Trigger: GGAAGCCTCATGCCGGGATCATGAGTTACAATGCAA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCGAATTGCTCAAGAACTaGGTGGGAGCAGCCCCAATC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCELLKN*VGAAPI
Trigger: GATTGGGGCTGCTCCCACTCAGTTCTTGAGCAATTC...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTTGTACTGAAACTACATaGCCAGCTGCTGGCAACCCC +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSCTETT*PAAGNP
Trigger: GGGGTTGCCAGCAGCTGGGCATGTAGTTTCAGTACA...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGTCACAGTCAAGGTTTaGCCACCACCAAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSVTVKV*PPPKLP
Trigger: AGGGAGCTTTGGTGGTGGGCAAACCTTGACTGTGAC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCTTCTCATTCTCTaGTTGGCTGTGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSPLLIL*LAVSVS
Trigger: GGACACAGACACAGCCAAGCAGAGAATGAGAAGCGG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCAGGCCTTTTGAAGTaGAAAATGTGGGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQPGLLK*KMWVPF
Trigger: GAATGGGACCCACATTTTGCACTTCAAAAGGCCTGG...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTGTGGAACGACAGTGTaGCCTCTGTGCCCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCCGTTV*PLCPVS
Trigger: ACTAACAGGGCACAGAGGGCACACTGTCGTTCCACA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCCCAAACACACCAATTaGTGGGGAGAACACATGATG +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPPKHTN*WGEHMM
Trigger: CATCATGTGTTCTCCCCAGCAATTGGTGTGTTTGGG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCGGATACAGCTGAGGTaGGAGAAAATCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSRIQLR*EKIQSL
Trigger: CAGGCTCTGGATTTTCTCCCACCTCAGCTGTATCCG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGACAGGGGAATGTGCCTaGCTTCAGCTGGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPTGECA*LQLEKH
Trigger: ATGTTTTTCCAGCTGAAGCCAGGCACATTCCCCTGT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCAGAGGCATCACAGATaGAGCCAGGAAAACCAATGC +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSQRHHR*SQENQC
Trigger: GCATTGGTTTTCCTGGCTCCATCTGTGATGCCTCTG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGATGACAGTAGCAGTGTaGACCTCCACAGGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPMTVAV*TSTGVV
Trigger: AACTACACCTGTGGAGGTCCACACTGCTACTGTCAT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCCAGAATCAGTTGGTTaGGGGATGGGACTGGTAATA +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPPESVG*GMGLVI
Trigger: TATTACCAGTCCCATCCCCCAACCAACTGATTCTGG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTCTGTGAAGTTTGAGTaGAGTACCTGGCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPSVKFE*STWQCF
Trigger: AAAGCACTGCCAGGTACTTCACTCAAACTTCACAGA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGACAACACTGAGAGAATaGAGTCCAGCTTCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPTTLRE*SPASSG
Trigger: TCCACTAGAAGCTGGACTTCATTCTCTCAGTGTTGT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATGAGTCTTTCCCGTTaGCCACACTCACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCMSLSR*PHSLHR
Trigger: TCTGTGGAGTGAGTGTGGTCAACGGGAAAGACTCAT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTTGCCTACGAAGACTTaGACACCCTGTGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPLPTKT*TPCVFS
Trigger: TGAAAACACACAGGGTGTTCAAGTCTTCGTAGGCAA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTCTCCAAACTTTCCTTaGAGGCATGTCTGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPSPNFP*RHVCVA
Trigger: TGCTACACAGACATGCCTTCAAGGAAAGTTTGGAGA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCCAAACGGAAAGATTaGCCAGCATGGAACACCTCT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSPKRKD*PAWNTS
Trigger: AGAGGTGTTCCATGCTGGTCAATCTTTCCGTTTGGG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCCCAGCTCATCAAGATaGCCAACGATTTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPPSSSR*PTILAF
Trigger: AAATGCCAAAATCGTTGGTCATCTTGATGAGCTGGG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTTTCTTGATGGTGGATaGACTGGAAAGCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQFLDGG*TGKQSW
Trigger: CCAAGACTGCTTTCCAGTTCATCCACCATCAAGAAA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAACACCTTTGCCCCTTaGTTCGGTCCGTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCNTFAP*FGPSGK
Trigger: TTTTCCAGACGGACCGAATCAAGGGGCAAAGGTGTT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTGGAATTAGCCTGGCTTaGGCATGGTTCACCATCAAT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSGISLA*AWFTIN
Trigger: ATTGATGGTGAACCATGCTCAAGCCAGGCTAATTCC...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTGCCATGTTATGAGCTaGAGCAAATGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSCHVMS*SKCWPA
Trigger: TGCTGGCCAACATTTGCTTCAGCTCATAACATGGCA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTCGAGGTGCCATGTTATaGGCTGAAGCAAATGTTGGC +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSRGAML*AEANVG
Trigger: GCCAACATTTGCTTCAGCTCATAACATGGCACCTCG...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGCTTGAGGGATCACTaGCCCAGAATTCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSSLRDH*PRIPQK
Trigger: TTTCTGGGGAATTCTGGGTCAGTGATCCCTCAAGCT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCAGCAGAGTACCACCTaGCAGGCTTCCAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCQQSTT*QASRIR
Trigger: CCTGATTCTGGAAGCCTGGCAGGTGGTACTCTGCTG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGGTACAGGGGAATGTaGCTGGCTTCAGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSRYRGM*LASAGK
Trigger: TTTTCCAGCTGAAGCCAGGCACATTCCCCTGTACCT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCACAATGTTATCTCCTaGCTTCCATGTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQHNVIS*LPCHCF
Trigger: GAAGCAGTGACATGGAAGGCAGGAGATAACATTGTG...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCCAGGTAAGGGAGCATaGAACATAATACAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSPGKGA*NIIQPP
Trigger: TGGAGGCTGTATTATGTTGCATGCTCCCTTACCTGG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGAAAACCAATGCTCCATaGAGGCTCTTGAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQKTNAP*RLLSTV
Trigger: CACTGTACTCAAGAGCCTGCATGGAGCATTGGTTTT...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGAATGTGGAAGTCCATaGAGGTCCAGCTCACCAAAC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSECGSP*RSSSPN
Trigger: GTTTGGTGAGCTGGACCTGCATGGACTTCCACATTC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCGGCACCCATGTACCCTaGGGTATGCTCATTGTATTC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCGTHVP*GMLIVF
Trigger: GAATACAATGAGCATACCCCAGGGTACATGGGTGCC...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGATCCAGAGCCTGCTATaGTTAGAATCGTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPIQSLL*LESCFL
Trigger: CAGAAAGCACGATTCTAACCATAGCAGGCTCTGGAT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGAACTGTCCGTTCTTTTaGGCTGAAGTCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQNCPFF*AEVSDN
Trigger: GTTGTCACTGACTTCAGCCCAAAAGAACGGACAGTT...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGATCCAGAGCCTTGTATaGTTACCCTTGTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQIQSLV*LPLSFL
Trigger: CAGGAATGACAAGGGTAACCATACAAGGCTCTGGAT...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTACCCAGAATGCAGCTaGGGTCACATCATCATTCAG +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSYPECS*GHIIIQ
Trigger: CTGAATGATGATGTGACCCCAGCTGCATTCTGGGTA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTTGAAGTGCAAAATGTaGGTCCCATTCCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPLKCKM*VPFPAH
Trigger: ATGAGCTGGGAATGGGACCCACATTTTGCACTTCAA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTTTGATTCGGTCCGTCTaGAAAAGCCCATTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSLIRSV*KSPFWG
Trigger: ACCCCAGAATGGGCTTTTCCAGACGGACCGAATCAA...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCCAGCCATGGTCCTGTaGGCCATTAATGAGATCAAC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCPAMVL*AINEIN
Trigger: GTTGATCTCATTAATGGCCCACAGGACCATGGCTGG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCATCAGAATGTGGTATaGGGAGTTCACAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCHQNVV*GVHRAF
Trigger: GAATGCCCTGTGAACTCCTCATACCACATTCTGATG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGGGACAACTGTTGACTaGGATTTGATGACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPGTTVD*DLMTCS
Trigger: AGAACAAGTCATCAAATCTCAGTCAACAGTTGTCCC...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTTCGGGGACAACTGTTaGCTGAGATTTGATGACTTG +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSFGDNC*LRFDDL
Trigger: CAAGTCATCAAATCTCAGTCAACAGTTGTCCCCGAA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTGTCATTCCTGTAGTTaGCCCTGCTTTTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSCHSCS*PCFWHH
Trigger: GTGATGCCAAAAGCAGGGTCAACTACAGGAATGACA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTGAGCCTTTTGTCTTATaGAGCATCGTCACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSEPFVL*SIVTGK
Trigger: TTTCCCTGTGACGATGCTTCATAAGACAAAAGGCTC...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGTACGCCCCCATCTGTaGTTAGGATATTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSVRPHL*LGYFLP
Trigger: AGGCAGAAAATATCCTAATCACAGATGGGGGCGTAC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTTCCATTCAAGTATGTaGGCATCGCCTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQFHSSM*ASPLEF
Trigger: GAATTCCAAAGGCGATGCTCACATACTTGAATGGAA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCTCCTATTATTCTGCTaGCACGGATTTTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPLLLFC*HGFCHL
Trigger: CAAGTGACAAAATCCGTGTCAGCAGAATAATAGGAG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCGTTTCGGCCGTCTTCTaGCCTCTATTAATATGCTCC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCVSAVF*PLLICS
Trigger: GGAGCATATTAATAGAGGGCAGAAGACGGCCGAAAC...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTATGAAAAGCTGCAGTTaGTCTGACATTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSMKSCS*SDIGQA
Trigger: TGCCTGCCCAATGTCAGAGCAACTGCAGCTTTTCAT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTATTGGTTACCCAGAATaGAGCTGGGGTCACATCATC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSIGYPE*SWGHII
Trigger: GATGATGTGACCCCAGCTGCATTCTGGGTAACCAAT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCAAAAGCCAAAGTGAGTaGCCCCAGCAGCCGCATTGT +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCKSQSE*PQQPHC
Trigger: ACAATGCGGCTGCTGGGGGCACTCACTTTGGCTTTT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGAGAGTACTGGTGTTTaGTTCAAGATGCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSESTGV*FKMPVS
Trigger: GGAGACTGGCATCTTGAAGCAAACACCAGTACTCTC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAGGAATAATCACATTTaGTCCTGGGCGAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSRNNHI*SWARYS
Trigger: ACTGTACCTCGCCCAGGAGCAAATGTGATTATTCCT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCATATCTTGGATCGGTaGTATCCCTGTAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSHILDR*YPCSLL
Trigger: AAGAAGGCTACAGGGATAGCACCGATCCAAGATATG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGATCTCAATTGCTGCATaGCAAAGTGTCGAACTCAAG +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPISIAA*QSVELK
Trigger: CTTGAGTTCGACACTTTGGCATGCAGCAATTGAGAT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCCTGGTTCATGTAGATaGCATACAAACCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCPGSCR*HTNLHG
Trigger: CCCATGGAGGTTTGTATGGCATCTACATGAACCAGG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTGTTCAGAGCCACTATaGCATGGAACAGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCCSEPL*HGTETV
Trigger: GACTGTCTCTGTTCCATGGCATAGTGGCTCTGAACA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCTTTTGGGCATTCCATaGTGTATTTTTGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQLLGIP*CIFGTD
Trigger: GTCTGTCCCAAAAATACAGCATGGAATGCCCAAAAG...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTGTTCTGTGCTCAGATaGCTTTCAAGTTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQCSVLR*LSSSQC
Trigger: ACACTGTGAACTTGAAAGGCATCTGAGCACAGAACA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCAAATCATCAGAATGTaGTATGAGGAGTTCACAGGG +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPQIIRM*YEEFTG
Trigger: CCCTGTGAACTCCTCATACCACATTCTGATGATTTG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGGAGATCCCTCTTGCTaGTCACTTGAACTGAATCTG +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSGDPSC*SLELNL
Trigger: CAGATTCAGTTCAAGTGACCAGCAAGAGGGATCTCC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTGCTGCCGCTTATAGGTaGAGAAGCTTCCTGAATTTT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSAAAYR*RSFLNF
Trigger: AAAATTCAGGAAGCTTCTCCACCTATAAGCGGCAGC...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAATGGACACAGCAACTaGTACATGTCCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCNGHSN*YMSSTS
Trigger: GGAAGTGCTGGACATGTACCAGTTGCTGTGTCCATT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTTCCAACTTCTGCCCTaGCTTCAAACACAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSFQLLP*LQTQFH
Trigger: ATGGAACTGTGTTTGAAGCCAGGGCAGAAGTTGGAA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTCAGGTGCCAATGTATTaGGTATCGTCCCAAACGGAA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSQVPMY*VSSQTE
Trigger: TTCCGTTTGGGACGATACCCAATACATTGGCACCTG...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCGTTTCGGTCAAAAGATaGGCCATCAGGGTGGTCATT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCVSVKR*AIRVVI
Trigger: AATGACCACCCTGATGGCCCATCTTTTGACCGAAAC...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTCTCCAATTCCCAGTTaGCTGTTTCCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSSPIPS*LFPSHS
Trigger: TGAGTGGGATGGAAACAGCCAACTGGGAATTGGAGA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTGTGAGCATCGCCTTTaGAATTCTGTAGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPCEHRL*NSVVSN
Trigger: ATTGGAGACTACAGAATTCCAAAGGCGATGCTCACA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTAGAGACAGTCTTCTTTaGCATGTATACCCCGCACAC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSRDSLL*HVYPAH
Trigger: GTGTGCGGGGTATACATGCCAAAGAAGACTGTCTCT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAGAGCCACTATGCCATaGAACAGAGACAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSRATMP*NRDSLL
Trigger: AAGAAGACTGTCTCTGTTCCATGGCATAGTGGCTCT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGCACCAAAAATCCACTaGTGCGTGCAACAAATGTGT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSAPKIH*CVQQMC
Trigger: ACACATTTGTTGCACGCATCAGTGGATTTTTGGTGC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTCTTGGTCTCATTTGTaGTTATCTGTCCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQSWSHL*LSVQSS
Trigger: TGAGCTTTGGACAGATAATCACAAATGAGACCAAGA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTGGCTGGAATTCCATTaGCATAGACTTCAACCTGTG +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCWLEFH*HRLQPV
Trigger: CACAGGTTGAAGTCTATGTCAATGGAATTCCAGCCA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCAGAGACGGATACAGCTaGGGTGGGAGAAAATCCAGA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCRDGYS*GGRKSR
Trigger: TCTGGATTTTCTCCCACCTCAGCTGTATCCGTCTCT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGGCCAGACATGTaGGATCTGACTCCGATAAAT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCIRPDM*DLTPIN
Trigger: ATTTATCGGAGTCAGATCTCACATGTCTGGCCTGAT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTAATGTCTGTGAAGTTTaGGTGAAGTACCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSNVCEV*VKYLAV
Trigger: CACTGCCAGGTACTTCACTCAAACTTCACAGACATT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGGAGAGATATGGAGTaGGCCTCATCAACATACCCG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCWRDME*ASSTYP
Trigger: CGGGTATGTTGATGAGGCTCACTCCATATCTCTCCA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCTACTGCAGGGCTGCTaGTGGTTAGATTTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCLLQGC*WLDFLE
Trigger: CTCTAGGAAATCTAACCATCAGCAGCCCTGCAGTAG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAACTGGAACCCATCCTaGAGGAACATGAACACTTGT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCNWNPS*RNMNTC
Trigger: ACAAGTGTTCATGTTCCTTCAGGATGGGTTCCAGTT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCATTACACACCCCAGTaGTTGATGTTACTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSHYTPQ*LMLLLK
Trigger: CTTTAGGAGTAACATCAATCACTGGGGTGTGTAATG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTGGGAATTGGTTTTCTTaGTGGTGGATGAACTGGAAA +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSGNWFS*WWMNWK
Trigger: TTTCCAGTTCATCCACCATCAAGAAAACCAATTCCC...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTATTGTTCTCTGGGGATaGTTGCCAGAAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSIVLWG*LPEGLI
Trigger: AATGAGTCCTTCTGGCAATCATCCCCAGAGAACAAT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCACTCATACTCAGCTTaGGGGATCACTGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCHSYSA*GITDPE
Trigger: TTCTGGGTCAGTGATCCCTCAAGCTGAGTATGAGTG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTATATCTTCAAGATGTaGTGGCCGGCTATTATTCCA +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQYIFKM*WPAIIP
Trigger: TGGAATAATAGCCGGCCAGCACATCTTGAAGATATA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTCTGGAGATCCCTCTTaGTGGTCACTTGAACTGAAT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCSGDPS*WSLELN
Trigger: ATTCAGTTCAAGTGACCAGCAAGAGGGATCTCCAGA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTCACCATCTCTTCCACTaGTACCTGAAATTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSHHLFH*YLKFSF
Trigger: GAAGCTGAATTTCAGGTAGCAGTGGAAGAGATGGTG...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCTGTCCAATGTACACTaGATCCACATAAATGGACTG +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSLSNVH*IHINGL
Trigger: CAGTCCATTTATGTGGATGCAGTGTACATTGGACAG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCTATGGTTAGAATCGTaGTTTCTGCATAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPLWLES*FLHRIL
Trigger: AAGGATCCTATGCAGAAAGCACGATTCTAACCATAG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAAGTGGGTACTCAAATaGAACAGAGGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSKWVLK*NRGDSR
Trigger: TCTGCTGTCTCCTCTGTTGCATTTGAGTACCCACTT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTGTGTCTGTGTCCTGTaGTTGCAATCACAATGTTAT +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQCVCVL*LQSQCY
Trigger: ATAACATTGTGATTGCAAGCACAGGACACAGACACA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTCCTCTTGGTCTCAATaGCAGCCTCATTGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSSSWSQ*QPHCCS
Trigger: TGAACAACAATGAGGCTGGCATTGAGACCAAGAGGA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCAATTCAATGGGTTTaGGGAGCCATTCCTCATATC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSPIQWV*GAIPHI
Trigger: GATATGAGGAATGGCTCCGCAAACCCATTGAATTGG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGGTGTTTGCTTCAAGATaGCAGTCTCCATTCTTACTA +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQVFASR*QSPFLL
Trigger: TAGTAAGAATGGAGACTGGCATCTTGAAGCAAACAC...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCACATCTTCTCCCTCCTaGCAATCCACAGCATCCACT +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCTSSPS*QSTAST
Trigger: AGTGGATGCTGTGGATTGGCAGGAGGGAGAAGATGT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGGTTTATCTCAATTGCTaGATGCCAAAGTGTCGAACT +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQVYLNC*MPKCRT
Trigger: AGTTCGACACTTTGGCATGCAGCAATTGAGATAAAC...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGTAGTGAACGGGAAATaGAGATCTTTCAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSVVNGK*RSFNWL
Trigger: CAGCCAGTTGAAAGATCTGCATTTCCCGTTCACTAC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGAGTAGGTGTCTTCTaGCATTGCTCGAGTATAGCA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSRVGVF*HCSSIA
Trigger: TGCTATACTCGAGCAATGCCAGAAGACACCTACTCT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTACAAAGAGCCTCTCTaGGGAAACATGTGGATGACT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCYKEPL*GNMWMT
Trigger: AGTCATCCACATGTTTCCCCAGAGAGGCTCTTTGTA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGACTGTCCCTGTTGAATaGAGAGTACATTTGATGACA +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQTVPVE*RVHLMT
Trigger: TGTCATCAAATGTACTCTCCATTCAACAGGGACAGT...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCTCCTTGGAGAGATATaGAGTGAGCCTCATCAACAT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSLLGEI*SEPHQH
Trigger: ATGTTGATGAGGCTCACTCCATATCTCTCCAAGGAG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCGTGCCTGGCTTCAGCTaGAAAAACATTAATGACTCC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCVPGFS*KNINDS
Trigger: GGAGTCATTAATGTTTTTCCAGCTGAAGCCAGGCAC...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGAGAATAGGAGTACTTTaGTCCAGCAGAATTATCTGC +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPRIGVL*SSRIIC
Trigger: GCAGATAATTCTGCTGGACCAAAGTACTCCTATTCT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTGGAAAAGCCCATTCTaGGGTAGAATGATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSWKSPF*GRMISS
Trigger: CGAGGAAATCATTCTACCCCAGAATGGGCTTTTCCA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTTGTCACAGCATATCTTaGATCGGTGCTATCCCTGTA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSCHSIS*IGAIPV
Trigger: TACAGGGATAGCACCGATCCAAGATATGCTGTGACA...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGAAACACACCAATTGCTaGGGAGAACACATGATGAAA +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPKHTNC*GEHMMK
Trigger: TTTCATCATGTGTTCTCCCCAGCAATTGGTGTGTTT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTATGCACGCTCTCCGTaGTCTGAAAATAAATTCCAT +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQYARSP*SENKFH
Trigger: ATGGAATTTATTTTCAGACCACGGAGAGCGTGCATA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTTTGCTGGAAATTTTGTaGGACACAGAAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSLLEIL*DTEGGM
Trigger: CATGCCACCTTCTGTGTCCCACAAAATTTCCAGCAA...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATAGCTCTGCCACTCTaGGATGTATTTACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCIALPL*DVFTGC
Trigger: GCAACCTGTAAATACATCCCAGAGTGGCAGAGCTAT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCATTATGTGTCCTGTaGATCGCTTCTTTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSPLCVL*IASFSD
Trigger: GTCTGAGAAAGAAGCGATCCACAGGACACATAATGG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTTCCAGATAAAGGTGTaGTGCTCCTTATTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCFQIKV*CSLLWG
Trigger: CCCCCACAATAAGGAGCATCACACCTTTATCTGGAA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGTATCTCCATTGGCATaGTCGAGTTTTAGACCATAC +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSVSPLA*SSFRPY
Trigger: GTATGGTCTAAAACTCGATCATGCCAATGGAGATAC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTACCCTCAATTCTTTTTaGTGTTCTGCAGGTTATCCT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSTLNSF*CSAGYP
Trigger: AGGATAACCTGCAGAACATCAAAAAGAATTGAGGGT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCCAAACCCCAGTTTCTaGCTTTCACATAGATATCAT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSPNPSF*LSHRYH
Trigger: ATGATATCTATGTGAAAGTCAGAAACTGGGGTTTGG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGGGGAAACATGTGGATaGCTTCCAAAATGTACAGTA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSGETCG*LPKCTV
Trigger: TACTGTACATTTTGGAAGTCATCCACATGTTTCCCC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTCCATATCCTTGGATTaGGTTTGGGAAGATTCCTGT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSSISLD*VWEDSC
Trigger: ACAGGAATCTTCCCAAACTCAATCCAAGGATATGGA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCATCCTGAAGGAACATaGACACTTGTCATGCAGACG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCHPEGT*TLVMQT
Trigger: CGTCTGCATGACAAGTGTTCATGTTCCTTCAGGATG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTACAAGTGTTATTTTCTaGAACTGGCACTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSTSVIF*NWHSIH
Trigger: GTGGATGGAGTGCCAGTTGCAGAAAATAACACTTGT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAAATCCACTGATGCGTaGAACAAATGTGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSKSTDA*NKCVLF
Trigger: GAACAAGACACATTTGTTGCACGCATCAGTGGATTT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCATCAACATACCCGCTaGTGTAGTAATAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSHQHTR*CSNRFQ
Trigger: CTGGAATCTATTACTACAGCAGCGGGTATGTTGATG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTATGGATCAAATCCCATaGCTGTCACAGTCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSMDQIP*LSQSRF
Trigger: AAACCTTGACTGTGACAGGCATGGGATTTGATCCAT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTAAGAATTCCAACTTCTaGCCTGGCTTCAAACACAGT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSKNSNF*PGFKHS
Trigger: ACTGTGTTTGAAGCCAGGGCAGAAGTTGGAATTCTT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAAATCTCCAAGCAGGTaGCAATGTATTGGGTATCGT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCKSPSR*QCIGYR
Trigger: ACGATACCCAATACATTGGCACCTGCTTGGAGATTT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTAGTAGACTGGTACTTTaGTGTACAAAGACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSSRLVL*CTKTAR
Trigger: TCTGGCAGTCTTTGTACAGCAAAGTACCAGTCTACT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCACCACCCTTATTGGGTaGATGAAAATACCGGATGCC +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCTTLIG*MKIPDA
Trigger: GGCATCCGGTATTTTCATGCACCCAATAAGGGTGGT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTATGGTTCACCATCAATaGGGTATCCTACTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSMVHHQ*GILLFQ
Trigger: TTGGAAGAGTAGGATACCGCATTGATGGTGAACCAT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCTTCTTTCTCAGACTTaGTCCTATTATTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSLLSQT*SYYSAD
Trigger: GTCAGCAGAATAATAGGAGCAAGTCTGAGAAAGAAG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGTCAAAAAGTACAGCTaGGTTTTTCAGGGAGTAACG +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSVKKYS*VFQGVT
Trigger: CGTTACTCCCTGAAAAACCCAGCTGTACTTTTTGAC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTATAGACTTCAACCTGTaGTTGCTGATTCAGTGTACG +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSIDFNL*LLIQCT
Trigger: CGTACACTGAATCAGCAACCACAGGTTGAAGTCTAT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCTCTGGGGAAACATGTaGATGACTTCCAAAATGTAC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCLWGNM*MTSKMY
Trigger: GTACATTTTGGAAGTCATCCACATGTTTCCCCAGAG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTTCTCATTCTCTGCTTaGCTGTGTCTGTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCFSFSA*LCLCPV
Trigger: CACAGGACACAGACACAGCCAAGCAGAGAATGAGAA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGAGCGGAATTCGTTTTTaGCAAATGTTTCGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPSGIRF*QMFRSK
Trigger: TTTTGACCGAAACATTTGCCAAAAACGAATTCCGCT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGAAAACCACCCTTATTaGGTGCATGAAAATACCGGA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSENHPY*VHENTG
Trigger: TCCGGTATTTTCATGCACCCAATAAGGGTGGTTTTC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAATGTGATTTGCATTTaGAATCAGAGCCATCCACCC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCNVICI*NQSHPP
Trigger: GGGTGGATGGCTCTGATTCCAAATGCAAATCACATT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAATCACATTTGCTCCTaGGCGAGGTACAGTATAATT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSNHICS*ARYSII
Trigger: AATTATACTGTACCTCGCCCAGGAGCAAATGTGATT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCTAGAGATAAGATTTTaGAGCCTGCTTCCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCLEIRF*SLLPQF
Trigger: AAACTGCGGAAGCAGGCTCCAAAATCTTATCTCTAG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTGGACATTCTTCACATaGATTGGATGCTGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSWTFFT*IGCCKS
Trigger: AGACTTACAGCATCCAATCCATGTGAAGAATGTCCA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGATCTTTCAACTGGCTaGGCAGTCACCTTAATCCAG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCDLSTG*AVTLIQ
Trigger: CTGGATTAAGGTGACTGCCCAGCCAGTTGAAAGATC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCTAAGGCCACCAACTTaGTTGTTATTGGAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCLRPPT*LLLESF
Trigger: AAAGGACTCCAATAACAACCAAGTTGGTGGCCTTAG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAGCGGTCATCACCTCTaGTATAAAACCTGTAAACAT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCSGHHL*YKTCKH
Trigger: ATGTTTACAGGTTTTATATCAGAGGTGATGACCGCT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTCCTTCTCTGTTTACTaGGACTTGTTCTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSSFSVY*DLFYFF
Trigger: GAAGAAATAGAACAAGTCTCAGTAAACAGAGAAGGA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAATGCCAACATTCATTaGGTTTTGTGGGTCAATATG +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSNANIH*VLWVNM
Trigger: CATATTGACCCACAAAACTCAATGAATGTTGGCATT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGTAACACAGTGTCATTaGCAGTGGTCACATTACATA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSVTQCH*QWSHYI
Trigger: TATGTAATGTGACCACTGTCAATGACACTGTGTTAC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTACAGACCAATATGGTTaGATTCCATGGATCAAATCC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSTDQYG*IPWIKS
Trigger: GGATTTGATCCATGGAATTCAACCATATTGGTCTGT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTATCAGAGTCCCACCTTaGATGAGTAACATTTTAAGA +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSIRVPP*MSNILR
Trigger: TCTTAAAATGTTACTCATTCAAGGTGGGACTCTGAT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGTCAGTCGTTTCTTCTaGAAGGGAACAATGCTAGTG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCVSRFF*KGTMLV
Trigger: CACTAGCATTGTTCCCTTTCAGAAGAAACGACTGAC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCGATGTAATTCCAACTaGTACACAGTTACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCRCNSN*YTVTLR
Trigger: CCTGAGGGTAACTGTGTATCAGTTGGAATTACATCG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGCATCTCCTGTCTaGTGTTCAGTAAAGACATTT +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSSASPV*CSVKTF
Trigger: AAATGTCTTTACTGAACAGCAGACAGGAGATGCACT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTTGCTGTACAAAGACTaGCAGATTATATTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQLLYKD*QIILQN
Trigger: ATTCTGCAATATAATCTGGCAGTCTTTGTACAGCAA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGTACAAGATCCTGTTTaGATGGGGAAATACTCTTCA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSVQDPV*MGKYSS
Trigger: TGAAGAGTATTTCCCCATGCAAACAGGATCTTGTAC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTCAAAATTCATAAAGTaGACAGACGACACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSSKFIK*TDDTVR
Trigger: CCTGACTGTGTCGTCTGTGCACTTTATGAATTTTGA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTCTGTTTATCTCAATTaGTGCATGCCAAAGTGTCGA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSSVYLN*CMPKCR
Trigger: TCGACACTTTGGCATGCAGCAATTGAGATAAACAGA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCGAAGGAATTGTTCTGTaGTCAGATGCCTTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCEGIVL*SDAFQV
Trigger: AACTTGAAAGGCATCTGAGCACAGAACAATTCCTTC...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGGAAACTAATTGCACATaGTTTCCCAATTCAGTATTG +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQETNCT*FPNSVL
Trigger: CAATACTGAATTGGGAAACCATGTGCAATTAGTTTC...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCTTGCCACTGTCTTaGTACTTGAACTTGAGATCA +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCILPLS*YLNLRS
Trigger: TGATCTCAAGTTCAAGTACCAAGACAGTGGCAAGAT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTCGTCCCAGCATATTTaGTTTGTAAGAAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQSSQHI*FVRNLE
Trigger: TTCTAGATTTCTTACAAACCAAATATGCTGGGACGA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCACCATATCTATGTTTaGCAAAAGTACAAACCGCCT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCHHIYV*QKYKPP
Trigger: AGGCGGTTTGTACTTTTGCCAAACATAGATATGGTG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGGATTCTTTTGAGAAATaGAGTATCTTCCATGGCATA +
Preference number: 4 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQDSFEK*SIFHGI
Trigger: TATGCCATGGAAGATACTCCATTTCTCAAAAGAATC...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTCTTGTTGGAATATTaGATATCACATTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPVLLEY*ISHLLL
Trigger: CAACAGCAAATGTGATATCCAATATTCCAACAAGAC...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAATAATAGAGAGTACTaGTGTTTGCTTCAAGATGCC +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSNNREY*CLLQDA
Trigger: GGCATCTTGAAGCAAACACCAGTACTCTCTATTATT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGATAGTGTCAATGAGTTaGACATTCTTCACATGGATT +
Preference number: 4 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPIVSMS*TFFTWI
Trigger: AATCCATGTGAAGAATGTCCAACTCATTGACACTAT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAGATCTTTCAACTaGCTGGGCAGTCACCTTAAT +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCCRSFN*LGSHLN
Trigger: ATTAAGGTGACTGCCCAGCCAGTTGAAAGATCTGCA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGTCAGCTCCATAGTTaGACTGACTTGCTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCCQLHS*TDLLEK
Trigger: TTTCTCAAGCAAGTCAGTTCAACTATGGAGCTGACA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAACATTTCTTCCATTTaGGCTCAGTGCTGTATTACT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCNISSI*AQCCIT
Trigger: AGTAATACAGCACTGAGCTCAAATGGAAGAAATGTT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCAGTTTCGTAGTCTCTaGAGTATTTCACTAGAAATC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCQFRSL*SISLEI
Trigger: GATTTCTAGTGAAATACTTCAGAGACTACGAAACTG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAATGTCTCCATATGGTaGTTTGTTTGGCTTAACATC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCNVSIW*FVWLNI
Trigger: GATGTTAAGCCAAACAAATCACCATATGGAGACATT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAAACTGGTAAGAAAATaGACCGGATGCAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSKLVRK*TGCRFL
Trigger: CAAAAATCTGCATCCGGTTCATTTTCTTACCAGTTT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCTTTCACATAGGATTTaGACTGTAAATCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSLSHRI*TVNLQA
Trigger: TGCTTGGAGATTTACAGTTCAAATCCTATGTGAAAG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCTAATAATCCCTTTATaGGGTGCTTTCTCAGTTACA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSLIIPL*GAFSVT
Trigger: TGTAACTGAGAAAGCACCTCATAAAGGGATTATTAG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTATAGTTGAACTGACTTaGTTGAGAAAAACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSIVELT*LRKTFS
Trigger: GGAGAAGGTTTTTCTCAAGCAAGTCAGTTCAACTAT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTATGTACCCTGGGGTATaGTCATTGTATTCAAGTATA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSMYPGV*SLYSSI
Trigger: TATACTTGAATACAATGAGCATACCCCAGGGTACAT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTACTAAAACTGTCCTTTaGTGTGACTTGAATTCCATT +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSTKTVL*CDLNSI
Trigger: AATGGAATTCAAGTCACAGCAAAGGACAGTTTTAGT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTCTGTGTCCTGTGCTTaGAATCACAATGTTATCTCC +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCSVSCA*NHNVIS
Trigger: GGAGATAACATTGTGATTGCAAGCACAGGACACAGA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTACTGCCAGATTATATTaGAGAATGTTGCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSTARLY*RMLPCS
Trigger: TGAACATGGCAACATTCTGCAATATAATCTGGCAGT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCCAGTTAATGTGATTTaGATTTGGAATCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCPVNVI*IWNQSH
Trigger: ATGGCTCTGATTCCAAATGCAAATCACATTAACTGG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCAAAAGGCCACTGATTaGATTGTAACTCATGATCCC +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCQKATD*IVTHDP
Trigger: GGGATCATGAGTTACAATGCAATCAGTGGCCTTTTG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGTTGAATCTGAGACATaGAAAAGGCCACTGATTGCA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCVESET*KRPLIA
Trigger: TGCAATCAGTGGCCTTTTGCATGTCTCAGATTCAAC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAATCCCTTTATGAGGTaGTTTCTCAGTTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCNPFMR*FLSYRN
Trigger: ATTCCTGTAACTGAGAAAGCACCTCATAAAGGGATT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTCACAAGTAATCGACTaGAAAGAAGAAACTAATTGC +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSSQVID*KEETNC
Trigger: GCAATTAGTTTCTTCTTTCCAGTCGATTACTTGTGA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGTAAACATCAGAATCTaGGGGCACCAAAAATCCACT +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCVNIRI*GHQKST
Trigger: AGTGGATTTTTGGTGCCCCCAGATTCTGATGTTTAC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAACAGAATTCTCAGTTaGTATTGTGCTGAACCCAAA +
Preference number: 4 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSNRILS*YCAEPK
Trigger: TTTGGGTTCAGCACAATACCAACTGAGAATTCTGTT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAAGATCCTGTTTGCATaGGGAAATACTCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: QPSSCCISSSPVLFSACSKILFA*GNTLQK
Trigger: TTTTTGAAGAGTATTTCCCCATGCAAACAGGATCTT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCAAAGCCACACAGGCATaGCGGTCAAAATTCATAAAG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCKATQA*RSKFIK
Trigger: CTTTATGAATTTTGACCGCCATGCCTGTGTGGCTTT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCGAAAAGATTTTCTCTTaGCATCACAAACCATGTCCA +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCEKIFS*HHKPCP
Trigger: TGGACATGGTTTGTGATGCCAAGAGAAAATCTTTTC...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGTCATAACCGGCAGGTaGAAAGATACAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCVITGR*KDTKMT
Trigger: TGTCATCTTTGTATCTTTCCACCTGCCGGTTATGAC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTTTCCATGTTGTAGATaGATCTGTATTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCFPCCR*ICIGKG
Trigger: CCCTTTCCCAATACAGATTCATCTACAACATGGAAA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTTGAATACGAATCTTTaGCTCCCCTGGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCLNTNL*LPWPII
Trigger: AATAATTGGCCAGGGGAGTCAAAGATTCGTATTCAA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTTTTTGATGTTGACATaGACTGGAACCCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCFLMLT*TGTHPE
Trigger: TTCAGGATGGGTTCCAGTTCATGTCAACATCAAAAA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTTGGAATCATTGATCTaGAGAAGAGGTTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCLESLI*RRGCFP
Trigger: TGGAAAGCAACCTCTTCTGCAGATCAATGATTCCAA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTATACACCGTATTTTGTaGGAGTTCATTTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSIHRIL*EFISKV
Trigger: AACTTTGGAAATGAACTCGCACAAAATACGGTGTAT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCGATATGTTGGTTAAGTaGTCCACACCTTTAAAATAC +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCDMLVK*STPLKY
Trigger: GTATTTTAAAGGTGTGGAGCACTTAACCAACATATC...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTATATGTCATTTTCTCTaGGAAACTCCTTCCATAATC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSICHFL*ETPSII
Trigger: GATTATGGAAGGAGTTTCCCAGAGAAAATGACATAT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCTTCCATTCAGAATCTaGCACTTGATCTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCLPFRI*HLISFS
Trigger: GGAAAATGAGATCAAGTGCCAGATTCTGAATGGAAG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATTCTGAATAGAAAGTaGGTACTCAAATGCAACAGA +
Preference number: 4 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCILNRK*VLKCNR
Trigger: TCTGTTGCATTTGAGTACCCACTTTCTATTCAGAAT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTAAGTATATGATATGTTaGTTAAGTGCTCCACACCTT +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSKYMIC*LSAPHL
Trigger: AAGGTGTGGAGCACTTAACCAACATATCATATACTT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGTACTGATATGTAGGTaGCATTTAAAACAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSVLICR*HLKQLF
Trigger: GAAGAGTTGTTTTAAATGCCACCTACATATCAGTAC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTCCATGCTGTATTTTTaGGACAGACCAAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCSMLYF*DRPRNC
Trigger: ACAATTCCTTGGTCTGTCCCAAAAATACAGCATGGA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCATGGTAACTGAATACTaGATTGTCATAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCMVTEY*IVIADP
Trigger: TGGATCAGCTATGACAATTCAGTATTCAGTTACCAT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR TCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCACATTAGTTTCTCCTaGACAAACATCCTTAAATCC +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCHISFS*TNILKS
Trigger: GGATTTAAGGATGTTTGTTCAGGAGAAACTAATGTG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR GCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCATTGGATATCACATTTaGTGTTGCCTACGAAGACTT +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCIGYHI*CCLRRL
Trigger: AAGTCTTCGTAGGCAACAGCAAATGTGATATCCAAT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCATCATTCAGTAGACTaGTACTTTGCTGTACAAAGA +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCHHSVD*YFAVQR
Trigger: TCTTTGTACAGCAAAGTACCAGTCTACTGAATGATG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CCA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTCACAGTGTTTCTTTTaGGCATTCCATGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCSQCFF*AFHAVF
Trigger: AAATACAGCATGGAATGCCCAAAAGAAACACTGTGA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS GCA 90 bp GTGTCTGGACAGGTGTCCCCACAGAGGAGGCTTTGCTGTGGCCACTaGTGCTGCTGCCACTACCCGGGCTACTTCCACTGCCACCAGGGA +
Preference number: 5 (lower is better)
Translates to: VSGQVSPQRRLCCGH*CCCHYPGYFHCHQG
Trigger: TCCCTGGTGGCAGTGGAAGTAGCCCGGGTAGTGGCAGCAGCAGCAGTGGCCACAGCAAAGCCTCCTCTGTGGGGACACCTGTCCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCCACAGAGGAGGCTTaGCTGTGGCCACTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQPTEEA*LWPLLL
Trigger: CAGCAGCAGTGGCCACAGCAAAGCCTCCTCTGTGGG...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS GCA 90 bp GAAGGGTCCAGTAAGGAGCTGTGTGGAACGACAGTGTGCCCTCTGTaGCCTGTTAGTGAGCCGTCAACGTCAATCAGTACTGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: EGSSKELCGTTVCPL*PVSEPSTSISTASC
Trigger: ACACGAAGCAGTACTGATTGACGTTGACGGCTCACTAACAGGGCACAGAGGGCACACTGTCGTTCCACACAGCTCCTTACTGGACCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCACACAGGGGTTCTGTaGCTAGGCAGCCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPHTGVL*LGSLLQ
Trigger: CTGCAGCAGGCTGCCTAGCAACAGAACCCCTGTGTG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp TTGTGGAACTGCAGGGCCCCTCCGTTCACCCATTCAGCTCCTTTTTaGCAGTTCCACACAGTGAGTGAGTTAAAGATGGCAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: LWNCRAPPFTHSAPF*QFHTVSELKMAGTG
Trigger: GCCAGTGCCTGCCATCTTTAACTCACTCACTGTGTGGAACTGTCAAAAAGGAGCTGAATGGGTGAACGGAGGGGCCCTGCAGTTCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp CCGGGCTACTTCCACTGCCACCAGGGACACTCTGTGCTGACAGGCTaGAGGGTCGTGAATCCACACGAACAGTATTATCCAGGACAAATT +
Preference number: 5 (lower is better)
Translates to: PGYFHCHQGHSVLTG*RVVNPHEQYYPGQI
Trigger: AATTTGTCCTGGATAATACTGTTCGTGTGGATTCACGACCCTTCAGCCTGTCAGCACAGAGTGTCCCTGGTGGCAGTGGAAGTAGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp GTACAGTGTGAAGGGTCCAGTAAGGAGCTGTGTGGAACGACAGTGTaGCCTCTGTGCCCTGTTAGTGAGCCGTCAACGTCAATCAGTACT +
Preference number: 5 (lower is better)
Translates to: VQCEGSSKELCGTTV*PLCPVSEPSTSIST
Trigger: AGTACTGATTGACGTTGACGGCTCACTAACAGGGCACAGAGGGCACACTGTCGTTCCACACAGCTCCTTACTGGACCCTTCACACTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp GATGGGCCATCAGGGTGGTCATTCATTCTGTACCAAAAGCCAAAGTaGGTGCCCCCAGCAGCCGCATTGTGTCGAATGGTGTTGTTAGGA +
Preference number: 5 (lower is better)
Translates to: DGPSGWSFILYQKPK*VPPAAALCRMVLLG
Trigger: TCCTAACAACACCATTCGACACAATGCGGCTGCTGGGGGCACTCACTTTGGCTTTTGGTACAGAATGAATGACCACCCTGATGGCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp TTTGCAGAGCAAACTGCAAGTCTGCAGCTGGCACAGCAGCAGGGATaGCTTTCAGGGTATGTCCATAAGCTTGAACATCAAAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: FAEQTASLQLAQQQG*LSGYVHKLEHQSCR
Trigger: GCGGCAGCTTTGATGTTCAAGCTTATGGACATACCCTGAAAGGCATCCCTGCTGCTGTGCCAGCTGCAGACTTGCAGTTTGCTCTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp CATTCCATCAGCGGACACCGACGCGATGGTCCGCTTCTCATTCTCTaGTTGGCTGTGTCTGTGTCCTGTGCTTGCAATCACAATGTTATC +
Preference number: 5 (lower is better)
Translates to: HSISGHRRDGPLLIL*LAVSVSCACNHNVI
Trigger: GATAACATTGTGATTGCAAGCACAGGACACAGACACAGCCAAGCAGAGAATGAGAAGCGGACCATCGCGTCGGTGTCCGCTGATGGAATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp AGACACAAGGGCCAGGTAGTGAACGGGAAATGCAGATCTTTCAACTaGCTGGGCAGTCACCTTAATCCAGCCAGAATCAGTTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RHKGQVVNGKCRSFN*LGSHLNPARISWLG
Trigger: CCCCAACCAACTGATTCTGGCTGGATTAAGGTGACTGCCCAGCCAGTTGAAAGATCTGCATTTCCCGTTCACTACCTGGCCCTTGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp GTCTTAGCTCCATATACAGGGAGCTCAGGAGATCTAAGATGCCCATaGAGAGTAATGACAGCCCGGTGTTGGAACGGGGATGCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: VLAPYTGSSGDLRCP*RVMTARCWNGDASV
Trigger: GACAGAAGCATCCCCGTTCCAACACCGGGCTGTCATTACTCTTCATGGGCATCTTAGATCTCCTGAGCTCCCTGTATATGGAGCTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp TCTCCAATTCCCAGTTGGCTGTTTCCATCCCACTCATACTCAGCTTaGGGGATCACTGACCCAGAATTCCCCAGAAAGGAACCATCCAGG +
Preference number: 5 (lower is better)
Translates to: SPIPSWLFPSHSYSA*GITDPEFPRKEPSR
Trigger: CCTGGATGGTTCCTTTCTGGGGAATTCTGGGTCAGTGATCCCTCAAGCTGAGTATGAGTGGGATGGAAACAGCCAACTGGGAATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTATTTCCGGCGGACACTaGGCACTCACCATCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSISGGH*ALTISS
Trigger: GGAAGAGATGGTGAGTGCCAAGTGTCCGCCGGAAAT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAAGAAAGGGGTGTGCTaGCCAGGACCACACCACGGT +
Preference number: 5 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSKKGVC*PGPHHG
Trigger: ACCGTGGTGTGGTCCTGGCAAGCACACCCCTTTCTT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTTCACCATCACAAAGTaGTGGAACTGCAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQFTITK*WNCRAP
Trigger: AGGGGCCCTGCAGTTCCACAACTTTGTGATGGTGAA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGACACTCCTAACACCTTaGCCCCTTGATTCGGTCCGT +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQTLLTP*PLDSVR
Trigger: ACGGACCGAATCAAGGGGCAAAGGTGTTAGGAGTGT...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp AGACGACACAGTCAGGCCTTGACTAAATGGGAGAACCAGGCCTTTTaGAGTGCAAAATGTGGGTCCCATTCCCAGCTCATCAAGATGACC +
Preference number: 5 (lower is better)
Translates to: RRHSQALTKWENQAF*SAKCGSHSQLIKMT
Trigger: GGTCATCTTGATGAGCTGGGAATGGGACCCACATTTTGCACTTCAAAAGGCCTGGTTCTCCCATTTAGTCAAGGCCTGACTGTGTCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp ACTACATGCCCAGCTGCTGGCAACCCCTTTACAAGTGTTATTTTCTaGAACTGGCACTCCATCCACACTGACTCGAACAGAGTAGGTGTC +
Preference number: 5 (lower is better)
Translates to: TTCPAAGNPFTSVIF*NWHSIHTDSNRVGV
Trigger: GACACCTACTCTGTTCGAGTCAGTGTGGATGGAGTGCCAGTTGCAGAAAATAACACTTGTAAAGGGGTTGCCAGCAGCTGGGCATGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp AGGGAACATGAGTTAGCTCCCACACACGGGCTGGTTACTGTGACCTaGTGGACTTCATTAGTCACATCAGCTGTCTCCCAGTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: REHELAPTHGLVTVT*WTSLVTSAVSQFSN
Trigger: ATTGGAAAACTGGGAGACAGCTGATGTGACTAATGAAGTCCAGCAGGTCACAGTAACCAGCCCGTGTGTGGGAGCTAACTCATGTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp CGATGGTCCGCTTCTCATTCTCTGCTTGGCTGTGTCTGTGTCCTGTaGTTGCAATCACAATGTTATCTCCTGCCTTCCATGTCACTGCTT +
Preference number: 5 (lower is better)
Translates to: RWSASHSLLGCVCVL*LQSQCYLLPSMSLL
Trigger: AAGCAGTGACATGGAAGGCAGGAGATAACATTGTGATTGCAAGCACAGGACACAGACACAGCCAAGCAGAGAATGAGAAGCGGACCATCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp CAGAGACGGATACAGCTGAGGTGGGAGAAAATCCAGAGCCTGCTATaGTTAGAATCGTGCTTTCTGCATAGGATCCTTCGGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: QRRIQLRWEKIQSLL*LESCFLHRILRKVL
Trigger: CAACACCTTCCGAAGGATCCTATGCAGAAAGCACGATTCTAACCATAGCAGGCTCTGGATTTTCTCCCACCTCAGCTGTATCCGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTGCTTTGGTCAGTGTGTaGATAGCAGTGCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSALVSV*IAVPRL
Trigger: CAACCTGGGCACTGCTATCAACACACTGACCAAAGC...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGCTTCTCATTCTCTGCTaGGCTGTGTCTGTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPLLILC*AVSVSC
Trigger: ACAGGACACAGACACAGCCAAGCAGAGAATGAGAAG...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTCCCAAACGGAAAGATaGACCAGCATGGAACACCTC +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPSQTER*TSMEHL
Trigger: GAGGTGTTCCATGCTGGTCAATCTTTCCGTTTGGGA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGGAGAACCAGGCCTTTaGAAGTGCAAAATGTGGGTC +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPGEPGL*KCKMWV
Trigger: GACCCACATTTTGCACTTCAAAAGGCCTGGTTCTCC...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp GGCTTCCAGAATCAGGCCAGACATGTGAGATCTGACTCCGATAAATaGAGTGGGATCCCTCACCCTCTAGATTCTGTGCTAGTCCAACAT +
Preference number: 5 (lower is better)
Translates to: GFQNQARHVRSDSDK*SGIPHPLDSVLVQH
Trigger: ATGTTGGACTAGCACAGAATCTAGAGGGTGAGGGATCCCACTTCATTTATCGGAGTCAGATCTCACATGTCTGGCCTGATTCTGGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp TCCGTTCACCCATTCAGCTCCTTTTTGACAGTTCCACACAGTGAGTaGGTTAAAGATGGCAGGCACTGGCACTGTAGAGGTACAAGATCC +
Preference number: 5 (lower is better)
Translates to: SVHPFSSFLTVPHSE*VKDGRHWHCRGTRS
Trigger: GGATCTTGTACCTCTACAGTGCCAGTGCCTGCCATCTTTAACTCACTCACTGTGTGGAACTGTCAAAAAGGAGCTGAATGGGTGAACGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp TTTACTGAGACTTGTTCTATTTCTTCCAGGCTTTGCAGAGCAAACTaGAAGTCTGCAGCTGGCACAGCAGCAGGGATGCCTTTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: FTETCSISSRLCRAN*KSAAGTAAGMPFRV
Trigger: TACCCTGAAAGGCATCCCTGCTGCTGTGCCAGCTGCAGACTTGCAGTTTGCTCTGCAAAGCCTGGAAGAAATAGAACAAGTCTCAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp GAACATGAGTTAGCTCCCACACACGGGCTGGTTACTGTGACCTGCTaGACTTCATTAGTCACATCAGCTGTCTCCCAGTTTTCCAATGTT +
Preference number: 5 (lower is better)
Translates to: EHELAPTHGLVTVTC*TSLVTSAVSQFSNV
Trigger: AACATTGGAAAACTGGGAGACAGCTGATGTGACTAATGAAGTCCAGCAGGTCACAGTAACCAGCCCGTGTGTGGGAGCTAACTCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp GGGATCCCTCACCCTCTAGATTCTGTGCTAGTCCAACATCAGCAATaGACACAGCAACTGGTACATGTCCAGCACTTCCATTCAGAATCT +
Preference number: 5 (lower is better)
Translates to: GIPHPLDSVLVQHQQ*TQQLVHVQHFHSES
Trigger: AGATTCTGAATGGAAGTGCTGGACATGTACCAGTTGCTGTGTCCATTGCTGATGTTGGACTAGCACAGAATCTAGAGGGTGAGGGATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp CAAGTGATCCTTCCTCTGGTGGTGGACTTCCTCCCCATGAGGAGTTaGCAGACCAAACATCGGCATATAAGAAGTCAGCATTCTCCAATT +
Preference number: 5 (lower is better)
Translates to: QVILPLVVDFLPMRS*QTKHRHIRSQHSPI
Trigger: AATTGGAGAATGCTGACTTCTTATATGCCGATGTTTGGTCTGCCAACTCCTCATGGGGAGGAAGTCCACCACCAGAGGAAGGATCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCGCAGTTGCTCTGACATaGGGCAGGCACTCCATGTAT +
Preference number: 5 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCAVALT*GRHSMY
Trigger: ATACATGGAGTGCCTGCCCAATGTCAGAGCAACTGC...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGCTGATGAACGTAATTaGACAAGGCTGATCCCCAAC +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPADERN*TRLIPN
Trigger: GTTGGGGATCAGCCTTGTCAAATTACGTTCATCAGC...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGCAGGTGCCAATGTATaGGGTATCGTCCCAAACGGA +
Preference number: 5 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSAGANV*GIVPNG
Trigger: TCCGTTTGGGACGATACCCAATACATTGGCACCTGC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGGAGCCAGGATCCTCTaGGTCTCAATGCCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCGARIL*VSMPAS
Trigger: TGAGGCTGGCATTGAGACCAAGAGGATCCTGGCTCC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCGACACAGTCAGGCCTaGACTAAATGGGAGAACCAG +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSRHSQA*TKWENQ
Trigger: CTGGTTCTCCCATTTAGTCAAGGCCTGACTGTGTCG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGAACTGGAAAGCAGTCTaGGAGAACACAGCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQNWKAV*ENTAVS
Trigger: GCTTACTGCTGTGTTCTCCAAGACTGCTTTCCAGTT...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTGGCATGTAGACCATaGAAAAGATGCTCATCCCGT +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPVACRP*KRCSSR
Trigger: ACGGGATGAGCATCTTTTCAATGGTCTACATGCCAC...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTCCAGCCAGAATCAGTaGGTTGGGGGATGGGACTGG +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCSSQNQ*VGGWDW
Trigger: CCAGTCCCATCCCCCAACCAACTGATTCTGGCTGGA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp CCCCTTTACAAGTGTTATTTTCTGCAACTGGCACTCCATCCACACTaGCTCGAACAGAGTAGGTGTCTTCTGGCATTGCTCGAGTATAGC +
Preference number: 5 (lower is better)
Translates to: PLYKCYFLQLALHPH*LEQSRCLLALLEYS
Trigger: GCTATACTCGAGCAATGCCAGAAGACACCTACTCTGTTCGAGTCAGTGTGGATGGAGTGCCAGTTGCAGAAAATAACACTTGTAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp CAGCTGAGGTGGGAGAAAATCCAGAGCCTGCTATGGTTAGAATCGTaGTTTCTGCATAGGATCCTTCGGAAGGTGTTGTTGTCAAGATCA +
Preference number: 5 (lower is better)
Translates to: QLRWEKIQSLLWLES*FLHRILRKVLLSRS
Trigger: TGATCTTGACAACAACACCTTCCGAAGGATCCTATGCAGAAAGCACGATTCTAACCATAGCAGGCTCTGGATTTTCTCCCACCTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp CAGAGTTACAGACCAATATGGTTGAATTCCATGGATCAAATCCCATaGCTGTCACAGTCAAGGTTTGCCCACCACCAAAGCTCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: QSYRPIWLNSMDQIP*LSQSRFAHHQSSLV
Trigger: CACAAGGGAGCTTTGGTGGTGGGCAAACCTTGACTGTGACAGGCATGGGATTTGATCCATGGAATTCAACCATATTGGTCTGTAACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp GGTATAACTTCTGTCACTTTGGGAATTGTCTCAGAGCTACCTTTGTaGGAATCTGCTGCACACCAAAGCAGCCCAAAGAGAAACCAGGTC +
Preference number: 5 (lower is better)
Translates to: GITSVTLGIVSELPL*ESAAHQSSPKRNQV
Trigger: GACCTGGTTTCTCTTTGGGCTGCTTTGGTGTGCAGCAGATTCCCACAAAGGTAGCTCTGAGACAATTCCCAAAGTGACAGAAGTTATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp TTACACACCCCAGTGATTGATGTTACTCCTAAAGCCACACAGGCATaGCGGTCAAAATTCATAAAGTGCACAGACGACACAGTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LHTPVIDVTPKATQA*RSKFIKCTDDTVRP
Trigger: AGGCCTGACTGTGTCGTCTGTGCACTTTATGAATTTTGACCGCCATGCCTGTGTGGCTTTAGGAGTAACATCAATCACTGGGGTGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTTGAGGATGTGTGGTTaGGGAGGAGTCTTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSLRMCG*GGVLQY
Trigger: ATACTGCAAGACTCCTCCCAAACCACACATCCTCAA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGGGGTTTTCCTTTGGTTaGTTCTGTGATACTCAGCGT +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQGFSFG*FCDTQR
Trigger: ACGCTGAGTATCACAGAACAAACCAAAGGAAAACCC...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGATCTTGCCACTGTCTaGGTACTTGAACTTGAGATC +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPDLATV*VLELEI
Trigger: GATCTCAAGTTCAAGTACCAAGACAGTGGCAAGATC...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTATTTCTTCCAGGCTTaGCAGAGCAAACTGCAAGTC +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQYFFQA*QSKLQV
Trigger: GACTTGCAGTTTGCTCTGCAAAGCCTGGAAGAAATA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTACTCACTCCACAGACTaGATCATGTCCCTTGCCATT +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSTHSTD*IMSLAI
Trigger: AATGGCAAGGGACATGATCAAGTCTGTGGAGTGAGT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGATGCCAGCCTCATTGTaGTTCACCATCACAAAGTTG +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPMPASL*FTITKL
Trigger: CAACTTTGTGATGGTGAACAACAATGAGGCTGGCAT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTCAATGCCAGCCTCATaGTTGTTCACCATCACAAAG +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQSMPAS*LFTITK
Trigger: CTTTGTGATGGTGAACAACAATGAGGCTGGCATTGA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTCCAATTCAATGGGTTaGCGGAGCCATTCCTCATAT +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQSNSMG*RSHSSY
Trigger: ATATGAGGAATGGCTCCGCAAACCCATTGAATTGGA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGGTCGTTTCCTGGGAATaGGTTTTCTTGATGGTGGAT +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQVVSWE*VFLMVD
Trigger: ATCCACCATCAAGAAAACCAATTCCCAGGAAACGAC...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTGTTTTGCTGGAAATTTaGTGGGACACAGAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSVLLEI*WDTEGG
Trigger: GCCACCTTCTGTGTCCCACAAAATTTCCAGCAAAAC...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGACTAAGGCCACCAACTaGGTTGTTATTGGAGTCCTT +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPTKATN*VVIGVL
Trigger: AAGGACTCCAATAACAACCAAGTTGGTGGCCTTAGT...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp GATCAGGGGAGTAATCATGGCATCCCATGTAAACCCACAGTCACCTaGACATTTGGCTGGAATTCCATTGACATAGACTTCAACCTGTGG +
Preference number: 5 (lower is better)
Translates to: DQGSNHGIPCKPTVT*TFGWNSIDIDFNLW
Trigger: CCACAGGTTGAAGTCTATGTCAATGGAATTCCAGCCAAATGTTCAGGTGACTGTGGGTTTACATGGGATGCCATGATTACTCCCCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp GGAATCAGAGCCATCCACCCTGACATATGGGTCAGTCGTTTCTTCTaGAAGGGAACAATGCTAGTGCCAAAAGAGTCTGAAAGAACCACA +
Preference number: 5 (lower is better)
Translates to: GIRAIHPDIWVSRFF*KGTMLVPKESERTT
Trigger: TGTGGTTCTTTCAGACTCTTTTGGCACTAGCATTGTTCCCTTTCAGAAGAAACGACTGACCCATATGTCAGGGTGGATGGCTCTGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp GTCAAAAAGTACAGCTGGGTTTTTCAGGGAGTAACGGCCACAATATaGATCTGTTTCGGCCGTCTTCTGCCCTCTATTAATATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VKKYSWVFQGVTATI*ICFGRLLPSINMLQ
Trigger: CTGGAGCATATTAATAGAGGGCAGAAGACGGCCGAAACAGATGCATATTGTGGCCGTTACTCCCTGAAAAACCCAGCTGTACTTTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp TTAAAGATGGCAGGCACTGGCACTGTAGAGGTACAAGATCCTGTTTaGATGGGGAAATACTCTTCAAAAATCCACAGTCCAAACCACCCC +
Preference number: 5 (lower is better)
Translates to: LKMAGTGTVEVQDPV*MGKYSSKIHSPNHP
Trigger: GGGGTGGTTTGGACTGTGGATTTTTGAAGAGTATTTCCCCATGCAAACAGGATCTTGTACCTCTACAGTGCCAGTGCCTGCCATCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp GATGTTGTCATCTATGTCCACCCCATCAGTCCCAAACACACCAATTaGTGGGGAGAACACATGATGAAATGCACAGCCTCGAACATAAGA +
Preference number: 5 (lower is better)
Translates to: DVVIYVHPISPKHTN*WGEHMMKCTASNIR
Trigger: TCTTATGTTCGAGGCTGTGCATTTCATCATGTGTTCTCCCCAGCAATTGGTGTGTTTGGGACTGATGGGGTGGACATAGATGACAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp TCTTCGTGTCTCTGTGTCAGAATCCAGGCTTTCCAGTACCATCATTaGATATTCCATTCCAGAACACTGATAGCTCTGCCACTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SSCLCVRIQAFQYHH*IFHSRTLIALPLWD
Trigger: ATCCCAGAGTGGCAGAGCTATCAGTGTTCTGGAATGGAATATGCAATGATGGTACTGGAAAGCCTGGATTCTGACACAGAGACACGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp CCAAACATAGGAAGCAGAATCCGTCCAAGTGGCACCCATGTACCCTaGGGTATGCTCATTGTATTCAAGTATATCTTCAAGATGTGCTGG +
Preference number: 5 (lower is better)
Translates to: PNIGSRIRPSGTHVP*GMLIVFKYIFKMCW
Trigger: CCAGCACATCTTGAAGATATACTTGAATACAATGAGCATACCCCAGGGTACATGGGTGCCACTTGGACGGATTCTGCTTCCTATGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp ATGGACACAGCAACTGGTACATGTCCAGCACTTCCATTCAGAATCTaGCACTTGATCTCATTTTCCTCCACAGAGAGAAGAGAGCATCTG +
Preference number: 5 (lower is better)
Translates to: MDTATGTCPALPFRI*HLISFSSTERREHL
Trigger: CAGATGCTCTCTTCTCTCTGTGGAGGAAAATGAGATCAAGTGCCAGATTCTGAATGGAAGTGCTGGACATGTACCAGTTGCTGTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp AATGTTTCCCACAAACAGGTACAGGGGAATGTGCCTGGCTTCAGCTaGAAAAACATTAATGACTCCTTGGAGAGATATGGAGTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: NVSHKQVQGNVPGFS*KNINDSLERYGVSL
Trigger: GAGGCTCACTCCATATCTCTCCAAGGAGTCATTAATGTTTTTCCAGCTGAAGCCAGGCACATTCCCCTGTACCTGTTTGTGGGAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp GTTGTCATCTATGTCCACCCCATCAGTCCCAAACACACCAATTGCTaGGGAGAACACATGATGAAATGCACAGCCTCGAACATAAGACAA +
Preference number: 5 (lower is better)
Translates to: VVIYVHPISPKHTNC*GEHMMKCTASNIRQ
Trigger: TTGTCTTATGTTCGAGGCTGTGCATTTCATCATGTGTTCTCCCCAGCAATTGGTGTGTTTGGGACTGATGGGGTGGACATAGATGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCTGGATATGTAGCTTaGAGGATGTGTGGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSPGYVA*RMCGLG
Trigger: TCCCAAACCACACATCCTCAAAGCTACATATCCAGG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTACGCAATCCTCACCTaGTCTTCTGTGCGCCCAGTT +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCYAILT*SSVRPV
Trigger: AACTGGGCGCACAGAAGACAAGGTGAGGATTGCGTA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTCTTGGTACTTGAACTaGAGATCAATGAAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPSWYLN*RSMKLA
Trigger: GGCCAACTTCATTGATCTCAAGTTCAAGTACCAAGA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGGTATGTCCATAAGCTaGAACATCAAAGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSGMSIS*NIKAAA
Trigger: AGCGGCAGCTTTGATGTTCAAGCTTATGGACATACC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCAGTCACCTGAACATTaGGCTGGAATTCCATTGACA +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSQSPEH*AGIPLT
Trigger: TGTCAATGGAATTCCAGCCAAATGTTCAGGTGACTG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAACCAAATCCAGATATaGTCAGCAGAGTACCACCTG +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSNQIQI*SAEYHL
Trigger: CAGGTGGTACTCTGCTGACAATATCTGGATTTGGTT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCGCCTGTCAAATGCTTaGGTCAGTGTGTTGATAGCA +
Preference number: 5 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCRLSNA*VSVLIA
Trigger: TGCTATCAACACACTGACCAAAGCATTTGACAGGCG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTTCCATATCCTTGGATaGAGTTTGGGAAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPFHILG*SLGRFL
Trigger: CAGGAATCTTCCCAAACTCAATCCAAGGATATGGAA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGATGAGTCTTTCCCGTaGACCACACTCACTCCACAG +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCDESFP*TTLTPQ
Trigger: CTGTGGAGTGAGTGTGGTCAACGGGAAAGACTCATC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGGGACATGATGGAATCTaGTCATTCCACTCCACATTA +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQGHDGI*SFHSTL
Trigger: TAATGTGGAGTGGAATGACAAGATTCCATCATGTCC...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGTGGGAATTGGTTTTCTaGATGGTGGATGAACTGGAA +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQWELVF*MVDELE
Trigger: TTCCAGTTCATCCACCATCAAGAAAACCAATTCCCA...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTATGTCACAGCATATCTaGGATCGGTGCTATCCCTGT +
Preference number: 5 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSMSQHI*DRCYPC
Trigger: ACAGGGATAGCACCGATCCAAGATATGCTGTGACAT...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp GGCCAGGCCGATGTTTTTGATGTTGACATGAACTGGAACCCATCCTaGAGGAACATGAACACTTGTCATGCAGACGATATGTGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: GQADVFDVDMNWNPS*RNMNTCHADDMCLV
Trigger: AACAAGACACATATCGTCTGCATGACAAGTGTTCATGTTCCTTCAGGATGGGTTCCAGTTCATGTCAACATCAAAAACATCGGCCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp ACATATGTCGCCTCAATGTTTCCCACAAACAGGTACAGGGGAATGTaGCTGGCTTCAGCTGGAAAAACATTAATGACTCCTTGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: TYVASMFPTNRYRGM*LASAGKTLMTPWRD
Trigger: ATCTCTCCAAGGAGTCATTAATGTTTTTCCAGCTGAAGCCAGGCACATTCCCCTGTACCTGTTTGTGGGAAACATTGAGGCGACATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTGAAAAACCTTCTCCCTaGATGGTCAGTCTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSEKPSP*MVSLVA
Trigger: AGCAACAAGACTGACCATCAAGGGAGAAGGTTTTTC...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTGTTGAACTGACTTGCTaGAGAAAAACCTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSVELTC*RKTFSL
Trigger: AAGGGAGAAGGTTTTTCTCAAGCAAGTCAGTTCAAC...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCCTTCAGTGCTGCCTTTaGATGGTGAGACCATCACGA +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCLQCCL*MVRPSR
Trigger: TCGTGATGGTCTCACCATCAAAAGGCAGCACTGAAG...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCAGAAGTGCCCGTGTATaGTCAATAGGGTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCRSARV*SIGCHL
Trigger: AAGGTGGCACCCTATTGACAATACACGGGCACTTCT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTTCTGTGCGCCCAGTTaGGCTGAAATAAATAGCATA +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSFCAPS*AEINSI
Trigger: TATGCTATTTATTTCAGCCAAACTGGGCGCACAGAA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTAAACGTCTCCAAATaGGGTTTTCCTTTGGTTTGT +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPVNVSK*GFPLVC
Trigger: ACAAACCAAAGGAAAACCCAATTTGGAGACGTTTAC...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTCTCCATATGGTGATTaGTTTGGCTTAACATCTGTC +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPSPYGD*FGLTSV
Trigger: GACAGATGTTAAGCCAAACAAATCACCATATGGAGA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAAAATATTCCTTTGTTaGCTAGTGCTGGAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSKIFLC*LVLEVS
Trigger: GGAGACCTCCAGCACTAGCAAACAAAGGAATATTTT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTCTCCTTCGATCACATaGCAGGTTTCATTTCCAACT +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSSPSIT*QVSFPT
Trigger: AGTTGGAAATGAAACCTGCAATGTGATCGAAGGAGA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTGTCCTTTGCTGTGACTaGAATTCCATTGGTAATGAC +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSVLCCD*NSIGND
Trigger: GTCATTACCAATGGAATTCAAGTCACAGCAAAGGAC...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTCACCATATCTATGTTaGGCAAAAGTACAAACCGCC +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSSPYLC*AKVQTA
Trigger: GGCGGTTTGTACTTTTGCCAAACATAGATATGGTGA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGTCTGTGTCCTGTGCTaGCAATCACAATGTTATCTC +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSVCVLC*QSQCYL
Trigger: GAGATAACATTGTGATTGCAAGCACAGGACACAGAC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCTCTGTTTATCTCAATaGCTGCATGCCAAAGTGTCG +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSLCLSQ*LHAKVS
Trigger: CGACACTTTGGCATGCAGCAATTGAGATAAACAGAG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCTCCATGGGCTTCATaGTTAAACCAGTTTTCCATG +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSPPWAS*LNQFSM
Trigger: CATGGAAAACTGGTTTAACAATGAAGCCCATGGAGG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGAGCTGAAGCAAATGTaGGCCAGCAAATCCCACTTC +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCELKQM*ASKSHF
Trigger: GAAGTGGGATTTGCTGGCCAACATTTGCTTCAGCTC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCATTCTTCACATGGATaGGATGCTGTAAGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQHSSHG*DAVSLH
Trigger: ATGAAGACTTACAGCATCCAATCCATGTGAAGAATG...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGAGAAAAGATTTTCTCTaGGCATCACAAACCATGTCC +
Preference number: 5 (lower is better)
Translates to: SLCSQVAAASVVVRFCFQRKDFL*ASQTMS
Trigger: GGACATGGTTTGTGATGCCAAGAGAAAATCTTTTCT...CTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCAAGTTAGGAAGGAATaGTTCTGTGCTCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCQVRKE*FCAQMP
Trigger: AGGCATCTGAGCACAGAACAATTCCTTCCTAACTTG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCTGCTGACACGGATTTaGTCACTTGGTATTTTTAGG +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSLLTRI*SLGIFR
Trigger: CCTAAAAATACCAAGTGACAAAATCCGTGTCAGCAG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp GTCCCAGTGGTCTTACATGTCACAGACCCTGTATCTCCATTGGCATaGTCGAGTTTTAGACCATACAAATCATCAGAATGTGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: VPVVLHVTDPVSPLA*SSFRPYKSSECGMR
Trigger: CCTCATACCACATTCTGATGATTTGTATGGTCTAAAACTCGATCATGCCAATGGAGATACAGGGTCTGTGACATGTAAGACCACTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp TTTGCTGGAAATTTTGTGGGACACAGAAGGTGGCATGTAGACCATTaGAAAGATGCTCATCCCGTTGTTCACCAGCGTCACGTTATAGAT +
Preference number: 5 (lower is better)
Translates to: FAGNFVGHRRWHVDH*KDAHPVVHQRHVID
Trigger: ATCTATAACGTGACGCTGGTGAACAACGGGATGAGCATCTTTTCAATGGTCTACATGCCACCTTCTGTGTCCCACAAAATTTCCAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp CCTGTAAACATCAGAATCTGGGGGCACCAAAAATCCACTGATGCGTaGAACAAATGTGTCTTGTTCTATAGGCCAAACATAGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: PVNIRIWGHQKSTDA*NKCVLFYRPNIGSR
Trigger: TCTGCTTCCTATGTTTGGCCTATAGAACAAGACACATTTGTTGCACGCATCAGTGGATTTTTGGTGCCCCCAGATTCTGATGTTTACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp TATTCTATTCTTCCAGTTACCATGTCAGCCCCAGGTAAGGGAGCATaGAACATAATACAGCCTCCAAACTGGTCACTTCCCATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: YSILPVTMSAPGKGA*NIIQPPNWSLPISS
Trigger: AGAAGAAATGGGAAGTGACCAGTTTGGAGGCTGTATTATGTTGCATGCTCCCTTACCTGGGGCTGACATGGTAACTGGAAGAATAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp AGAAGGACTCATTGGACCATAAATTGTAAGCGGCTGGTCGTTTCCTaGGAATTGGTTTTCTTGATGGTGGATGAACTGGAAAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: RRTHWTINCKRLVVS*ELVFLMVDELESSL
Trigger: AAGACTGCTTTCCAGTTCATCCACCATCAAGAAAACCAATTCCCAGGAAACGACCAGCCGCTTACAATTTATGGTCCAATGAGTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTCCTGGGGTATGCTCATaGTATTCAAGTATATCTTCA +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSPGVCS*YSSISS
Trigger: TGAAGATATACTTGAATACAATGAGCATACCCCAGG...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp GTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGTTTTCTCCGATAATGTaGGAATCATTGATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: VGLFLAVQPSSCCISSSPFSPIM*ESLICR
Trigger: TCTGCAGATCAATGATTCCAACATTATCGGAGAAAA...CGGACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTTCAGAATCTGGCACTaGATCTCATTTTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCFRIWH*ISFSST
Trigger: TGTGGAGGAAAATGAGATCAAGTGCCAGATTCTGAA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTACCGGATGCAGATTTTaGTCTCCCATTTGTAAATCC +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSTGCRF*SPICKS
Trigger: GGATTTACAAATGGGAGACAAAAATCTGCATCCGGT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTAACATTAATGACTCCTaGGAGAGATATGGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSNINDS*ERYGVS
Trigger: GCTCACTCCATATCTCTCCAAGGAGTCATTAATGTT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTGTAGAGGGAGTAATGTaGATGATAGAGGGTGAAATG +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSVEGVM*MIEGEM
Trigger: CATTTCACCCTCTATCATCAACATTACTCCCTCTAC...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTCATAAATCCAGAGCCTaGTATGGTTACCCTTGTCAT +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSHKSRA*YGYPCH
Trigger: ATGACAAGGGTAACCATACAAGGCTCTGGATTTATG...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTACCACCAAAGCTCCCTaGTGTTGGATAAATATTCTG +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSTTKAP*CWINIL
Trigger: CAGAATATTTATCCAACACAAGGGAGCTTTGGTGGT...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTGTATGATTGATGAATaGCACAGCCTTTCACATAGG +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSCMIDE*HSLSHR
Trigger: CCTATGTGAAAGGCTGTGCAATTCATCAATCATACA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTCGTCACCAACTATTTaGATGTTCCTACTCAGTATC +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSSSPTI*MFLLSI
Trigger: GATACTGAGTAGGAACATCAAAATAGTTGGTGACGA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTTCCATGCTGTATTTTaGGGACAGACCAAGGAATTG +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSFHAVF*GQTKEL
Trigger: CAATTCCTTGGTCTGTCCCAAAAATACAGCATGGAA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCAGGCCACCAACTTGGTaGTTATTGGAGTCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCRPPTW*LLESFR
Trigger: CCTAAAGGACTCCAATAACAACCAAGTTGGTGGCCT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp TGGAAGCATTTAACTTGTTCCTTGTTGACGCCAAACCCCAGTTTCTaGCTTTCACATAGATATCATGTTTTCCTGGAGGTAACGTGGGCA +
Preference number: 5 (lower is better)
Translates to: WKHLTCSLLTPNPSF*LSHRYHVFLEVTWA
Trigger: TGCCCACGTTACCTCCAGGAAAACATGATATCTATGTGAAAGTCAGAAACTGGGGTTTGGCGTCAACAAGGAACAAGTTAAATGCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp ATGGTTTCCCAATTCAGTATTGTCAGCTCCATAGTTGAACTGACTTaGTTGAGAAAAACCTTCTCCCTTGATGGTCAGTCTTGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: MVSQFSIVSSIVELT*LRKTFSLDGQSCCS
Trigger: GGAGCAACAAGACTGACCATCAAGGGAGAAGGTTTTTCTCAAGCAAGTCAGTTCAACTATGGAGCTGACAATACTGAATTGGGAAACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp CATCACCATATCTATGTTTGGCAAAAGTACAAACCGCCTGTCAAATaGTTTGGTCAGTGTGTTGATAGCAGTGCCCAGGTTGTAGACAAT +
Preference number: 5 (lower is better)
Translates to: HHHIYVWQKYKPPVK*FGQCVDSSAQVVDN
Trigger: ATTGTCTACAACCTGGGCACTGCTATCAACACACTGACCAAAGCATTTGACAGGCGGTTTGTACTTTTGCCAAACATAGATATGGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp TGGTTACCCAGAATGCAGCTGGGGTCACATCATCATTCAGTAGACTaGTACTTTGCTGTACAAAGACTGCCAGATTATATTGCAGAATGT +
Preference number: 5 (lower is better)
Translates to: WLPRMQLGSHHHSVD*YFAVQRLPDYIAEC
Trigger: ACATTCTGCAATATAATCTGGCAGTCTTTGTACAGCAAAGTACCAGTCTACTGAATGATGATGTGACCCCAGCTGCATTCTGGGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp ATGATCTTGAATCTGTCCCAGGTTAAGAAATGTCACAGCATATCTTaGATCGGTGCTATCCCTGTAGCCTTCTTGACCACTGTGATGAAA +
Preference number: 5 (lower is better)
Translates to: MILNLSQVKKCHSIS*IGAIPVAFLTTVMK
Trigger: TTTCATCACAGTGGTCAAGAAGGCTACAGGGATAGCACCGATCCAAGATATGCTGTGACATTTCTTAACCTGGGACAGATTCAAGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp AGTTACAGGAATTCTACTTCCATTCAAGTATGTGAGCATCGCCTTTaGAATTCTGTAGTCTCCAATTCCCAGTTGGCTGTTTCCATCCCA +
Preference number: 5 (lower is better)
Translates to: SYRNSTSIQVCEHRL*NSVVSNSQLAVSIP
Trigger: TGGGATGGAAACAGCCAACTGGGAATTGGAGACTACAGAATTCCAAAGGCGATGCTCACATACTTGAATGGAAGTAGAATTCCTGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp TCTGTGAGGAGTGAGGTCTGTATAGTTGGCCCAACAGGTGCTAAATaGAATTGTTGTATTTCCACTAAGGCCACCAACTTGGTTGTTATT +
Preference number: 5 (lower is better)
Translates to: SVRSEVCIVGPTGAK*NCCISTKATNLVVI
Trigger: AATAACAACCAAGTTGGTGGCCTTAGTGGAAATACAACAATTCCATTTAGCACCTGTTGGGCCAACTATACAGACCTCACTCCTCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTCTCGTCCCAGCATATTaGGTTTGTAAGAAATCTAGA +
Preference number: 5 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSLVPAY*VCKKSR
Trigger: TCTAGATTTCTTACAAACCAAATATGCTGGGACGAG...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTACCCTCAATTCTTTTaGATGTTCTGCAGGTTATCC +
Preference number: 5 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCYPQFF*MFCRLS
Trigger: GGATAACCTGCAGAACATCAAAAAGAATTGAGGGTA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTAACATACACCGTATTTaGTGCGAGTTCATTTCCAAA +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSNIHRI*CEFISK
Trigger: TTTGGAAATGAACTCGCACAAAATACGGTGTATGTT...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTCCAAAACGTTCTCCTTaGATGAGGACATTTCCATAT +
Preference number: 5 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSPKRSP*MRTFPY
Trigger: ATATGGAAATGTCCTCATCAAAGGAGAACGTTTTGG...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCTGTAACACAGTGTCATaGACAGTGGTCACATTACAT +
Preference number: 5 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCCNTVS*TVVTLH
Trigger: ATGTAATGTGACCACTGTCAATGACACTGTGTTACA...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CAGCCAAGTAGCTGCTGCATCAGTAGTAGTCCGGTTTTGTTTTCAGCCTGTTCTTACAGACCAATATGGTaGAATTCCATGGATCAAATC +
Preference number: 5 (lower is better)
Translates to: QPSSCCISSSPVLFSACSYRPIW*NSMDQI
Trigger: GATTTGATCCATGGAATTCAACCATATTGGTCTGTA...AGAACAGGCTGAAAACAAAACCGGACTACTACTGATGCAGCAGCTACTTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAAGAATAGGAGTACTTaGGTCCAGCAGAATTATCTG +
Preference number: 5 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCKNRST*VQQNYL
Trigger: CAGATAATTCTGCTGGACCAAAGTACTCCTATTCTT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTTCTCCAAACTTTCCTaGAAGGCATGTCTGTGTAGC +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCFSKLS*KACLCS
Trigger: GCTACACAGACATGCCTTCAAGGAAAGTTTGGAGAA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGGTACAAGATCCTGTTaGCATGGGGAAATACTCTTC +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCGTRSC*HGEILF
Trigger: GAAGAGTATTTCCCCATGCAAACAGGATCTTGTACC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCATCCCTGTAGCCTTCTaGACCACTGTGATGAAATTC +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCIPVAF*TTVMKF
Trigger: GAATTTCATCACAGTGGTCAAGAAGGCTACAGGGAT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTTTCCAGTACCATCATaGCATATTCCATTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSFPVPS*HIPFQN
Trigger: GTTCTGGAATGGAATATGCAATGATGGTACTGGAAA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTTTCACAGTGTTTCTTTaGGGCATTCCATGCTGTATT +
Preference number: 5 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSFTVFL*GIPCCI
Trigger: AATACAGCATGGAATGCCCAAAAGAAACACTGTGAA...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp CATAAATCCAGAGCCTTGTATGGTTACCCTTGTCATTCCTGTAGTTaGCCCTGCTTTTGGCATCACCATATCTATGTTTGGCAAAAGTAC +
Preference number: 5 (lower is better)
Translates to: HKSRALYGYPCHSCS*PCFWHHHIYVWQKY
Trigger: GTACTTTTGCCAAACATAGATATGGTGATGCCAAAAGCAGGGTCAACTACAGGAATGACAAGGGTAACCATACAAGGCTCTGGATTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp ATACCAGTTAATGTGATTTGCATTTGGAATCAGAGCCATCCACCCTaGCATATGGGTCAGTCGTTTCTTCTGAAAGGGAACAATGCTAGT +
Preference number: 5 (lower is better)
Translates to: IPVNVICIWNQSHPP*HMGQSFLLKGNNAS
Trigger: ACTAGCATTGTTCCCTTTCAGAAGAAACGACTGACCCATATGTCAGGGTGGATGGCTCTGATTCCAAATGCAAATCACATTAACTGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp GTCCTGTGGATCGCTTCTTTCTCAGACTTGCTCCTATTATTCTGCTaGCACGGATTTTGTCACTTGGTATTTTTAGGAACAAGGCAAGAT +
Preference number: 5 (lower is better)
Translates to: VLWIASFSDLLLLFC*HGFCHLVFLGTRQD
Trigger: ATCTTGCCTTGTTCCTAAAAATACCAAGTGACAAAATCCGTGTCAGCAGAATAATAGGAGCAAGTCTGAGAAAGAAGCGATCCACAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp GCTCAGATGCCTTTCAAGTTCACAGTGTTTCTTTTGGGCATTCCATaGTGTATTTTTGGGACAGACCAAGGAATTGTTCACATAGACATC +
Preference number: 5 (lower is better)
Translates to: AQMPFKFTVFLLGIP*CIFGTDQGIVHIDI
Trigger: GATGTCTATGTGAACAATTCCTTGGTCTGTCCCAAAAATACAGCATGGAATGCCCAAAAGAAACACTGTGAACTTGAAAGGCATCTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp TGTAAGTCCCAGTGGTCTTACATGTCACAGACCCTGTATCTCCATTaGCATGATCGAGTTTTAGACCATACAAATCATCAGAATGTGGTA +
Preference number: 5 (lower is better)
Translates to: CKSQWSYMSQTLYLH*HDRVLDHTNHQNVV
Trigger: TACCACATTCTGATGATTTGTATGGTCTAAAACTCGATCATGCCAATGGAGATACAGGGTCTGTGACATGTAAGACCACTGGGACTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp AAACCCATTATAGTGATTTCAGTGCCACCATACAAAGAGCCTCTCTaGGGAAACATGTGGATGACTTCCAAAATGTACAGTATGGAAGCA +
Preference number: 5 (lower is better)
Translates to: KPIIVISVPPYKEPL*GNMWMTSKMYSMEA
Trigger: TGCTTCCATACTGTACATTTTGGAAGTCATCCACATGTTTCCCCAGAGAGGCTCTTTGTATGGTGGCACTGAAATCACTATAATGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTAGTTGCAACAAATGTGTCTaGTTCTATAGGCCAAACATA +
Preference number: 5 (lower is better)
Translates to: SVGLFLAVQPSSCCISSSCNKCV*FYRPNI
Trigger: TATGTTTGGCCTATAGAACAAGACACATTTGTTGCA...ACTACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCAAATTGGGTTTTCCTTaGGTTTGTTCTGTGATACTC +
Preference number: 5 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCKLGFP*VCSVIL
Trigger: GAGTATCACAGAACAAACCAAAGGAAAACCCAATTT...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCCCTTTAATTGTTAAATaGACCTTTCCCAGAACTGTC +
Preference number: 5 (lower is better)
Translates to: FLEHSVGLFLAVQPSSCCPLIVK*TFPRTV
Trigger: GACAGTTCTGGGAAAGGTCAATTTAACAATTAAAGG...GCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp CATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTGCATCAGTAGTCCAAATAGTAAATCCTaGAATAAGAGAACAACCAGG +
Preference number: 5 (lower is better)
Translates to: HSVGLFLAVQPSSCCISSPNSKS*NKRTTR
Trigger: CCTGGTTGTTCTCTTATTCAAGGATTTACTATTTGG...ACTACTGATGCAGCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp TTGTTGGAATATTGGATATCACATTTGCTGTTGCCTACGAAGACTTaGACACCCTGTGTGTTTTCACTGAATCCAGATCCTGTGACTGTA +
Preference number: 5 (lower is better)
Translates to: LLEYWISHLLLPTKT*TPCVFSLNPDPVTV
Trigger: TACAGTCACAGGATCTGGATTCAGTGAAAACACACAGGGTGTTCAAGTCTTCGTAGGCAACAGCAAATGTGATATCCAATATTCCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp CTGACTTGCTTGAGAAAAACCTTCTCCCTTGATGGTCAGTCTTGTTaGTCCGTTTATGCTGCCATATTTAGGTATAACTTCTGTCACTTT +
Preference number: 5 (lower is better)
Translates to: LTCLRKTFSLDGQSC*SVYAAIFRYNFCHF
Trigger: AAAGTGACAGAAGTTATACCTAAATATGGCAGCATAAACGGAGCAACAAGACTGACCATCAAGGGAGAAGGTTTTTCTCAAGCAAGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp AGTAACATTTTAAGAATAGGAGTACTTTGGTCCAGCAGAATTATCTaGCCTTTTGTAATAACGGCAAGTGATCCTTCCTCTGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: SNILRIGVLWSSRII*PFVITASDPSSGGG
Trigger: TCCACCACCAGAGGAAGGATCACTTGCCGTTATTACAAAAGGGCAGATAATTCTGCTGGACCAAAGTACTCCTATTCTTAAAATGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp TTTCAAGTTCACAGTGTTTCTTTTGGGCATTCCATGCTGTATTTTTaGGACAGACCAAGGAATTGTTCACATAGACATCCAGACGCTGAA +
Preference number: 5 (lower is better)
Translates to: FQVHSVSFGHSMLYF*DRPRNCSHRHPDAE
Trigger: TTCAGCGTCTGGATGTCTATGTGAACAATTCCTTGGTCTGTCCCAAAAATACAGCATGGAATGCCCAAAAGAAACACTGTGAACTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp AATTGTTCTGTGCTCAGATGCCTTTCAAGTTCACAGTGTTTCTTTTaGGCATTCCATGCTGTATTTTTGGGACAGACCAAGGAATTGTTC +
Preference number: 5 (lower is better)
Translates to: NCSVLRCLSSSQCFF*AFHAVFLGQTKELF
Trigger: GAACAATTCCTTGGTCTGTCCCAAAAATACAGCATGGAATGCCCAAAAGAAACACTGTGAACTTGAAAGGCATCTGAGCACAGAACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp CAGGTGCTAAATGGAATTGTTGTATTTCCACTAAGGCCACCAACTTaGTTGTTATTGGAGTCCTTTAGGATAGCCTTCAAAGTAAGCGAT +
Preference number: 5 (lower is better)
Translates to: QVLNGIVVFPLRPPT*LLLESFRIAFKVSD
Trigger: ATCGCTTACTTTGAAGGCTATCCTAAAGGACTCCAATAACAACCAAGTTGGTGGCCTTAGTGGAAATACAACAATTCCATTTAGCACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGGTTTGGGAGGAGTCTaGCAGTATATAGTATTTTCT +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCGLGGV*QYIVFS
Trigger: AGAAAATACTATATACTGCAAGACTCCTCCCAAACC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCAAGCGGAATTCGTTTTaGGCAAATGTTTCGGTCAAA +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCKRNSF*ANVSVK
Trigger: TTTGACCGAAACATTTGCCAAAAACGAATTCCGCTT...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCGAAGTATATGATATGTaGGTTAAGTGCTCCACACCT +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCEVYDM*VKCSTP
Trigger: AGGTGTGGAGCACTTAACCAACATATCATATACTTC...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp TGGCATGATCGAGTTTTAGACCATACAAATCATCAGAATGTGGTATaGGGAGTTCACAGGGCATTCCTCCGATATAAATTCTTAGAATCC +
Preference number: 5 (lower is better)
Translates to: WHDRVLDHTNHQNVV*GVHRAFLRYKFLES
Trigger: GGATTCTAAGAATTTATATCGGAGGAATGCCCTGTGAACTCCTCATACCACATTCTGATGATTTGTATGGTCTAAAACTCGATCATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp CTCAAATTCCATTATGTGTCCTGTGGATCGCTTCTTTCTCAGACTTaGTCCTATTATTCTGCTGACACGGATTTTGTCACTTGGTATTTT +
Preference number: 5 (lower is better)
Translates to: LKFHYVSCGSLLSQT*SYYSADTDFVTWYF
Trigger: AAAATACCAAGTGACAAAATCCGTGTCAGCAGAATAATAGGAGCAAGTCTGAGAAAGAAGCGATCCACAGGACACATAATGGAATTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp CTGAAGGAACATGAACACTTGTCATGCAGACGATATGTGTCTTGTTaGAATATTGGATATCACATTTGCTGTTGCCTACGAAGACTTGAA +
Preference number: 5 (lower is better)
Translates to: LKEHEHLSCRRYVSC*NIGYHICCCLRRLE
Trigger: TTCAAGTCTTCGTAGGCAACAGCAAATGTGATATCCAATATTCCAACAAGACACATATCGTCTGCATGACAAGTGTTCATGTTCCTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS-3UTR CAA 90 bp TATTTCCTTGAACATTCTGTAGGTTTATTTCTCGCTGTGCAGCCAAGTAGCTGCTTAGGGATGATTCTTTaGAGAAATGGAGTATCTTCC +
Preference number: 5 (lower is better)
Translates to: YFLEHSVGLFLAVQPSSCLGMIL*RNGVSS
Trigger: GGAAGATACTCCATTTCTCAAAAGAATCATCCCTAA...GCAGCTACTTGGCTGCACAGCGAGAAATAAACCTACAGAATGTTCAAGGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209244.2
CDS TCA 90 bp GCCTGGAGTTCAATATTAGCTTCATCAAATATCAGAGTCCCACCTTaGATGAGTAACATTTTAAGAATAGGAGTACTTTGGTCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: AWSSILASSNIRVPP*MSNILRIGVLWSSR
Trigger: TCTGCTGGACCAAAGTACTCCTATTCTTAAAATGTTACTCATTCAAGGTGGGACTCTGATATTTGATGAAGCTAATATTGAACTCCAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp TGCTTCAAGATGCCAGTCTCCATTCTTACTAGAATTCCAATTCAATaGGTTTGCGGAGCCATTCCTCATATCAACAACATTAAACATATC +
Preference number: 5 (lower is better)
Translates to: CFKMPVSILTRIPIQ*VCGAIPHINNIKHI
Trigger: GATATGTTTAATGTTGTTGATATGAGGAATGGCTCCGCAAACCCATTGAATTGGAATTCTAGTAAGAATGGAGACTGGCATCTTGAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp AAGATGCCAGTCTCCATTCTTACTAGAATTCCAATTCAATGGGTTTaGGGAGCCATTCCTCATATCAACAACATTAAACATATCAGGATT +
Preference number: 5 (lower is better)
Translates to: KMPVSILTRIPIQWV*GAIPHINNIKHIRI
Trigger: AATCCTGATATGTTTAATGTTGTTGATATGAGGAATGGCTCCGCAAACCCATTGAATTGGAATTCTAGTAAGAATGGAGACTGGCATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 90 bp GATGATTCTTTTGAGAAATGGAGTATCTTCCATGGCATATGTAAATaGCAAAGGTGGGTAGATGATCGCATTGACACTAATCTTCAGATT +
Preference number: 5 (lower is better)
Translates to: DDSFEKWSIFHGICK*QRWVDDRIDTNLQI
Trigger: AATCTGAAGATTAGTGTCAATGCGATCATCTACCCACCTTTGTCATTTACATATGCCATGGAAGATACTCCATTTCTCAAAAGAATCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 90 bp TTCAGTAGACTGGTACTTTGCTGTACAAAGACTGCCAGATTATATTaGAGAATGTTGCCATGTTCAATACCATCTTCTATGAAAAATGCT +
Preference number: 5 (lower is better)
Translates to: FSRLVLCCTKTARLY*RMLPCSIPSSMKNA
Trigger: AGCATTTTTCATAGAAGATGGTATTGAACATGGCAACATTCTGCAATATAATCTGGCAGTCTTTGTACAGCAAAGTACCAGTCTACTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp TTTAGTGCATCTCCTGTCTGCTGTTCAGTAAAGACATTTTTATACTaGTACAGTCCAACATCAACAAAAGCACTTAATGTATACTCTTGC +
Preference number: 5 (lower is better)
Translates to: FSASPVCCSVKTFLY*YSPTSTKALNVYSC
Trigger: GCAAGAGTATACATTAAGTGCTTTTGTTGATGTTGGACTGTACCAGTATAAAAATGTCTTTACTGAACAGCAGACAGGAGATGCACTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 90 bp AAATGTGAACCGTTGTTGGTAATTCTGAATACTGTCCCTGTTGAATaGAGAGTACATTTGATGACATTTTCTGATGATGATGTAATGTCA +
Preference number: 5 (lower is better)
Translates to: KCEPLLVILNTVPVE*RVHLMTFSDDDVMS
Trigger: TGACATTACATCATCATCAGAAAATGTCATCAAATGTACTCTCCATTCAACAGGGACAGTATTCAGAATTACCAACAACGGTTCACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp AGCGGACACCGACGCGATGGTCCGCTTCTCATTCTCTaGTTGGCTGTGTCTGTGTCCTGTGCTTGCAATCAC +
Preference number: 6 (lower is better)
Translates to: SGHRRDGPLLIL*LAVSVSCACNH
Trigger: GTGATTGCAAGCACAGGACACAGACACAGCCAAGCAGAGAATGAGAAGCGGACCATCGCGTCGGTGTCCGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GAAGGGTCCAGTAAGGAGCTGTGTGGAACGACAGTGTaGCCTCTGTGCCCTGTTAGTGAGCCGTCAACGTCA +
Preference number: 6 (lower is better)
Translates to: EGSSKELCGTTV*PLCPVSEPSTS
Trigger: TGACGTTGACGGCTCACTAACAGGGCACAGAGGGCACACTGTCGTTCCACACAGCTCCTTACTGGACCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp CTTCCTACAAGGCACGCTGTTATGACAGCCAGTGTCTaGACAGGTGTCCCCACAGAGGAGGCTTTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LPTRHAVMTASV*TGVPTEEALLW
Trigger: CCACAGCAAAGCCTCCTCTGTGGGGACACCTGTCCAGACACTGGCTGTCATAACAGCGTGCCTTGTAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp AGCAAATGTTGGCCAGCAAATCCCACTTCTCCCACCTaGCGGGGGCCTAGAACTTCGATGTGCAGAGGTGAG +
Preference number: 6 (lower is better)
Translates to: SKCWPANPTSPT*RGPRTSMCRGE
Trigger: CTCACCTCTGCACATCGAAGTTCTAGGCCCCCGTCAGGTGGGAGAAGTGGGATTTGCTGGCCAACATTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp CCCGGCATGAGGCTTCCGAGGTGCCATGTTATGAGCTaGAGCAAATGTTGGCCAGCAAATCCCACTTCTCCC +
Preference number: 6 (lower is better)
Translates to: PGMRLPRCHVMS*SKCWPANPTSP
Trigger: GGGAGAAGTGGGATTTGCTGGCCAACATTTGCTTCAGCTCATAACATGGCACCTCGGAAGCCTCATGCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GCTAGGCAGCCTGCTGCAGTACTTGCCAACTGTAAATaGGCAGGGCCTGCTGGAACATATGTCGCCTCAATG +
Preference number: 6 (lower is better)
Translates to: ARQPAAVLANCK*AGPAGTYVASM
Trigger: CATTGAGGCGACATATGTTCCAGCAGGCCCTGCGCATTTACAGTTGGCAAGTACTGCAGCAGGCTGCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp TCACATCCTTCACACCAGGATCTAGGGTCCCAGAGATaGGCTGGCTCTGAGGTAGGTCACTTCTCCCTGACA +
Preference number: 6 (lower is better)
Translates to: SHPSHQDLGSQR*AGSEVGHFSLT
Trigger: TGTCAGGGAGAAGTGACCTACCTCAGAGCCAGCCCATCTCTGGGACCCTAGATCCTGGTGTGAAGGATGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp GGACACTTGGCACTCACCATCTCTTCCACTGCTACCTaGAATTCAGCTTCCGATGACTCTGGGGTAAGGGGC +
Preference number: 6 (lower is better)
Translates to: GHLALTISSTAT*NSASDDSGVRG
Trigger: GCCCCTTACCCCAGAGTCATCGGAAGCTGAATTTCAGGTAGCAGTGGAAGAGATGGTGAGTGCCAAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp GCAGAAGAGGTTGCTTTCCACGGGGGCTTGTCCATCTaGTGCTCCATGAATAGCCAGCACAGGTTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: AEEVAFHGGLSI*CSMNSQHRFLL
Trigger: GAGAAGGAACCTGTGCTGGCTATTCATGGAGCATCAGATGGACAAGCCCCCGTGGAAAGCAACCTCTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GAGTTAGCTCCCACACACGGGCTGGTTACTGTGACCTaGTGGACTTCATTAGTCACATCAGCTGTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: ELAPTHGLVTVT*WTSLVTSAVSQ
Trigger: CTGGGAGACAGCTGATGTGACTAATGAAGTCCAGCAGGTCACAGTAACCAGCCCGTGTGTGGGAGCTAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp AGGTTATGTGCATTCCATCAGCGGACACCGACGCGATaGTCCGCTTCTCATTCTCTGCTTGGCTGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: RLCAFHQRTPTR*SASHSLLGCVC
Trigger: ACAGACACAGCCAAGCAGAGAATGAGAAGCGGACCATCGCGTCGGTGTCCGCTGATGGAATGCACATAACCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp AATTCTGTACCCTATACCCCTAAGAAAGGGGTGTGCTaGCCAGGACCACACCACGGTATCGCCCACAGTCAC +
Preference number: 6 (lower is better)
Translates to: NSVPYTPKKGVC*PGPHHGIAHSH
Trigger: GTGACTGTGGGCGATACCGTGGTGTGGTCCTGGCAAGCACACCCCTTTCTTAGGGGTATAGGGTACAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GGACACCGACGCGATGGTCCGCTTCTCATTCTCTGCTaGGCTGTGTCTGTGTCCTGTGCTTGCAATCACAAT +
Preference number: 6 (lower is better)
Translates to: GHRRDGPLLILC*AVSVSCACNHN
Trigger: ATTGTGATTGCAAGCACAGGACACAGACACAGCCAAGCAGAGAATGAGAAGCGGACCATCGCGTCGGTGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp CTCAGGAGATCTAAGATGCCCATGAAGAGTAATGACAGCCCGGTGTaGGAACGGGGATGCTTCTGTCCCAATCTGAAGTACGCCCCCATC +
Preference number: 6 (lower is better)
Translates to: LRRSKMPMKSNDSPV*ERGCFCPNLKYAPI
Trigger: GATGGGGGCGTACTTCAGATTGGGACAGAAGCATCCCCGTTCCAACACCGGGCTGTCATTACTCTTCATGGGCATCTTAGATCTCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp TCCATCAGCGGACACCGACGCGATGGTCCGCTTCTCATTCTCTGCTaGGCTGTGTCTGTGTCCTGTGCTTGCAATCACAATGTTATCTCC +
Preference number: 6 (lower is better)
Translates to: SISGHRRDGPLLILC*AVSVSCACNHNVIS
Trigger: GGAGATAACATTGTGATTGCAAGCACAGGACACAGACACAGCCAAGCAGAGAATGAGAAGCGGACCATCGCGTCGGTGTCCGCTGATGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TCAGGGTGGTCATTCATTCTGTACCAAAAGCCAAAGTaGGTGCCCCCAGCAGCCGCATTGTGTCGAATGGTG +
Preference number: 6 (lower is better)
Translates to: SGWSFILYQKPK*VPPAAALCRMV
Trigger: CACCATTCGACACAATGCGGCTGCTGGGGGCACTCACTTTGGCTTTTGGTACAGAATGAATGACCACCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TTCCACTGCCACCAGGGACACTCTGTGCTGACAGGCTaGAGGGTCGTGAATCCACACGAACAGTATTATCCA +
Preference number: 6 (lower is better)
Translates to: FHCHQGHSVLTG*RVVNPHEQYYP
Trigger: TGGATAATACTGTTCGTGTGGATTCACGACCCTTCAGCCTGTCAGCACAGAGTGTCCCTGGTGGCAGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GGGAATTGTCTCAGAGCTACCTTTGTGGGAATCTGCTaGACACCAAAGCAGCCCAAAGAGAAACCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: GNCLRATFVGIC*TPKQPKEKPGP
Trigger: GGGACCTGGTTTCTCTTTGGGCTGCTTTGGTGTGCAGCAGATTCCCACAAAGGTAGCTCTGAGACAATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp AGTGCCCGTGTATTGTCAATAGGGTGCCACCTTCAGTaGTGCCTTTTGATGGTGAGACCATCACGACCTCTG +
Preference number: 6 (lower is better)
Translates to: SARVLSIGCHLQ*CLLMVRPSRPL
Trigger: CAGAGGTCGTGATGGTCTCACCATCAAAAGGCAGCACTGAAGGTGGCACCCTATTGACAATACACGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp ATGAAGAGTAATGACAGCCCGGTGTTGGAACGGGGATaGTTCTGTCCCAATCTGAAGTACGCCCCCATCTGT +
Preference number: 6 (lower is better)
Translates to: MKSNDSPVLERG*FCPNLKYAPIC
Trigger: ACAGATGGGGGCGTACTTCAGATTGGGACAGAAGCATCCCCGTTCCAACACCGGGCTGTCATTACTCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp AGTAAGGAGCTGTGTGGAACGACAGTGTGCCCTCTGTaGCCTGTTAGTGAGCCGTCAACGTCAATCAGTACT +
Preference number: 6 (lower is better)
Translates to: SKELCGTTVCPL*PVSEPSTSIST
Trigger: AGTACTGATTGACGTTGACGGCTCACTAACAGGGCACAGAGGGCACACTGTCGTTCCACACAGCTCCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp ATGCCAGCCTCATTGTTGTTCACCATCACAAAGTTGTaGAACTGCAGGGCCCCTCCGTTCACCCATTCAGCT +
Preference number: 6 (lower is better)
Translates to: MPASLLFTITKL*NCRAPPFTHSA
Trigger: AGCTGAATGGGTGAACGGAGGGGCCCTGCAGTTCCACAACTTTGTGATGGTGAACAACAATGAGGCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp AAAGATACTGGGGAAGGCTTGTTGAATGCTAGCCGGTaGAAGCTGACAGAGGCATCACAGATGGAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: KDTGEGLLNASR*KLTEASQMEPG
Trigger: TCCTGGCTCCATCTGTGATGCCTCTGTCAGCTTCCACCGGCTAGCATTCAACAAGCCTTCCCCAGTATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CCTTCCTCTGGTGGTGGACTTCCTCCCCATGAGGAGTaGGCAGACCAAACATCGGCATATAAGAAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: PSSGGGLPPHEE*ADQTSAYKKSA
Trigger: TGCTGACTTCTTATATGCCGATGTTTGGTCTGCCAACTCCTCATGGGGAGGAAGTCCACCACCAGAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp CTCTTGGTCTCAATGCCAGCCTCATTGTTGTTCACCATCACAAAGTaGTGGAACTGCAGGGCCCCTCCGTTCACCCATTCAGCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: LLVSMPASLLFTITK*WNCRAPPFTHSAPF
Trigger: AAAAGGAGCTGAATGGGTGAACGGAGGGGCCCTGCAGTTCCACAACTTTGTGATGGTGAACAACAATGAGGCTGGCATTGAGACCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp CCATATACAGGGAGCTCAGGAGATCTAAGATGCCCATaGAGAGTAATGACAGCCCGGTGTTGGAACGGGGAT +
Preference number: 6 (lower is better)
Translates to: PYTGSSGDLRCP*RVMTARCWNGD
Trigger: ATCCCCGTTCCAACACCGGGCTGTCATTACTCTTCATGGGCATCTTAGATCTCCTGAGCTCCCTGTATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TGCAGGGCCCCTCCGTTCACCCATTCAGCTCCTTTTTaGCAGTTCCACACAGTGAGTGAGTTAAAGATGGCA +
Preference number: 6 (lower is better)
Translates to: CRAPPFTHSAPF*QFHTVSELKMA
Trigger: TGCCATCTTTAACTCACTCACTGTGTGGAACTGTCAAAAAGGAGCTGAATGGGTGAACGGAGGGGCCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp CCCAGTTGGCTGTTTCCATCCCACTCATACTCAGCTTaGGGGATCACTGACCCAGAATTCCCCAGAAAGGAA +
Preference number: 6 (lower is better)
Translates to: PSWLFPSHSYSA*GITDPEFPRKE
Trigger: TTCCTTTCTGGGGAATTCTGGGTCAGTGATCCCTCAAGCTGAGTATGAGTGGGATGGAAACAGCCAACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CTTCCAGTTACCATGTCAGCCCCAGGTAAGGGAGCATaGAACATAATACAGCCTCCAAACTGGTCACTTCCC +
Preference number: 6 (lower is better)
Translates to: LPVTMSAPGKGA*NIIQPPNWSLP
Trigger: GGGAAGTGACCAGTTTGGAGGCTGTATTATGTTGCATGCTCCCTTACCTGGGGCTGACATGGTAACTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GGTGGTCATTCATTCTGTACCAAAAGCCAAAGTGAGTaGCCCCAGCAGCCGCATTGTGTCGAATGGTGTTGT +
Preference number: 6 (lower is better)
Translates to: GGHSFCTKSQSE*PQQPHCVEWCC
Trigger: ACAACACCATTCGACACAATGCGGCTGCTGGGGGCACTCACTTTGGCTTTTGGTACAGAATGAATGACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GCCTCATTGTTGTTCACCATCACAAAGTTGTGGAACTaGAGGGCCCCTCCGTTCACCCATTCAGCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: ASLLFTITKLWN*RAPPFTHSAPF
Trigger: AAAAGGAGCTGAATGGGTGAACGGAGGGGCCCTGCAGTTCCACAACTTTGTGATGGTGAACAACAATGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp TTAGCTCCCACACACGGGCTGGTTACTGTGACCTGCTaGACTTCATTAGTCACATCAGCTGTCTCCCAGTTT +
Preference number: 6 (lower is better)
Translates to: LAPTHGLVTVTC*TSLVTSAVSQF
Trigger: AAACTGGGAGACAGCTGATGTGACTAATGAAGTCCAGCAGGTCACAGTAACCAGCCCGTGTGTGGGAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp CTTCCTCTGGTGGTGGACTTCCTCCCCATGAGGAGTTaGCAGACCAAACATCGGCATATAAGAAGTCAGCAT +
Preference number: 6 (lower is better)
Translates to: LPLVVDFLPMRS*QTKHRHIRSQH
Trigger: ATGCTGACTTCTTATATGCCGATGTTTGGTCTGCCAACTCCTCATGGGGAGGAAGTCCACCACCAGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp GGCCAGGTAGTGAACGGGAAATGCAGATCTTTCAACTaGCTGGGCAGTCACCTTAATCCAGCCAGAATCAGT +
Preference number: 6 (lower is better)
Translates to: GQVVNGKCRSFN*LGSHLNPARIS
Trigger: ACTGATTCTGGCTGGATTAAGGTGACTGCCCAGCCAGTTGAAAGATCTGCATTTCCCGTTCACTACCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CTGGGAGATCAGTCTGATCGAAGAAGTGCCCGTGTATaGTCAATAGGGTGCCACCTTCAGTGCTGCCTTTTG +
Preference number: 6 (lower is better)
Translates to: LGDQSDRRSARV*SIGCHLQCCLL
Trigger: CAAAAGGCAGCACTGAAGGTGGCACCCTATTGACAATACACGGGCACTTCTTCGATCAGACTGATCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CCAGCAGCCGCATTGTGTCGAATGGTGTTGTTAGGATaGGTTACCCAGAATGCAGCTGGGGTCACATCATCA +
Preference number: 6 (lower is better)
Translates to: PAAALCRMVLLG*VTQNAAGVTSS
Trigger: TGATGATGTGACCCCAGCTGCATTCTGGGTAACCAATCCTAACAACACCATTCGACACAATGCGGCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GGAGCCAGGATCCTCTTGGTCTCAATGCCAGCCTCATaGTTGTTCACCATCACAAAGTTGTGGAACTGCAGG +
Preference number: 6 (lower is better)
Translates to: GARILLVSMPAS*LFTITKLWNCR
Trigger: CCTGCAGTTCCACAACTTTGTGATGGTGAACAACAATGAGGCTGGCATTGAGACCAAGAGGATCCTGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp GCAAGTGATCCTTCCTCTGGTGGTGGACTTCCTCCCCATGAGGAGTaGGCAGACCAAACATCGGCATATAAGAAGTCAGCATTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: ASDPSSGGGLPPHEE*ADQTSAYKKSAFSN
Trigger: ATTGGAGAATGCTGACTTCTTATATGCCGATGTTTGGTCTGCCAACTCCTCATGGGGAGGAAGTCCACCACCAGAGGAAGGATCACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp AGTCAGGCCTTGACTAAATGGGAGAACCAGGCCTTTTaGAGTGCAAAATGTGGGTCCCATTCCCAGCTCATC +
Preference number: 6 (lower is better)
Translates to: SQALTKWENQAF*SAKCGSHSQLI
Trigger: GATGAGCTGGGAATGGGACCCACATTTTGCACTTCAAAAGGCCTGGTTCTCCCATTTAGTCAAGGCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CCAGCTGCTGGCAACCCCTTTACAAGTGTTATTTTCTaGAACTGGCACTCCATCCACACTGACTCGAACAGA +
Preference number: 6 (lower is better)
Translates to: PAAGNPFTSVIF*NWHSIHTDSNR
Trigger: TCTGTTCGAGTCAGTGTGGATGGAGTGCCAGTTGCAGAAAATAACACTTGTAAAGGGGTTGCCAGCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp TCTGATCGAAGAAGTGCCCGTGTATTGTCAATAGGGTaGCACCTTCAGTGCTGCCTTTTGATGGTGAGACCA +
Preference number: 6 (lower is better)
Translates to: SDRRSARVLSIG*HLQCCLLMVRP
Trigger: TGGTCTCACCATCAAAAGGCAGCACTGAAGGTGGCACCCTATTGACAATACACGGGCACTTCTTCGATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CAAACTGCAAGTCTGCAGCTGGCACAGCAGCAGGGATaGCTTTCAGGGTATGTCCATAAGCTTGAACATCAA +
Preference number: 6 (lower is better)
Translates to: QTASLQLAQQQG*LSGYVHKLEHQ
Trigger: TTGATGTTCAAGCTTATGGACATACCCTGAAAGGCATCCCTGCTGCTGTGCCAGCTGCAGACTTGCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp ATCTATGTCCACCCCATCAGTCCCAAACACACCAATTaGTGGGGAGAACACATGATGAAATGCACAGCCTCG +
Preference number: 6 (lower is better)
Translates to: IYVHPISPKHTN*WGEHMMKCTAS
Trigger: CGAGGCTGTGCATTTCATCATGTGTTCTCCCCAGCAATTGGTGTGTTTGGGACTGATGGGGTGGACATAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp TATGTCCACCCCATCAGTCCCAAACACACCAATTGCTaGGGAGAACACATGATGAAATGCACAGCCTCGAAC +
Preference number: 6 (lower is better)
Translates to: YVHPISPKHTNC*GEHMMKCTASN
Trigger: GTTCGAGGCTGTGCATTTCATCATGTGTTCTCCCCAGCAATTGGTGTGTTTGGGACTGATGGGGTGGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp AGCAGCAGGGATGCCTTTCAGGGTATGTCCATAAGCTaGAACATCAAAGCTGCCGCTTATAGGTGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: SSRDAFQGMSIS*NIKAAAYRWRS
Trigger: GCTTCTCCACCTATAAGCGGCAGCTTTGATGTTCAAGCTTATGGACATACCCTGAAAGGCATCCCTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TCTAAGATGCCCATGAAGAGTAATGACAGCCCGGTGTaGGAACGGGGATGCTTCTGTCCCAATCTGAAGTAC +
Preference number: 6 (lower is better)
Translates to: SKMPMKSNDSPV*ERGCFCPNLKY
Trigger: GTACTTCAGATTGGGACAGAAGCATCCCCGTTCCAACACCGGGCTGTCATTACTCTTCATGGGCATCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CATCTATGTCCACCCCATCAGTCCCAAACACACCAATaGCTGGGGAGAACACATGATGAAATGCACAGCCTC +
Preference number: 6 (lower is better)
Translates to: HLCPPHQSQTHQ*LGRTHDEMHSL
Trigger: GAGGCTGTGCATTTCATCATGTGTTCTCCCCAGCAATTGGTGTGTTTGGGACTGATGGGGTGGACATAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp CAGGGGAATGTGCCTGGCTTCAGCTGGAAAAACATTAATGACTCCTaGGAGAGATATGGAGTGAGCCTCATCAACATACCCGCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: QGNVPGFSWKNINDS*ERYGVSLINIPAAV
Trigger: TACAGCAGCGGGTATGTTGATGAGGCTCACTCCATATCTCTCCAAGGAGTCATTAATGTTTTTCCAGCTGAAGCCAGGCACATTCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp TGGTCCGCTTCTCATTCTCTGCTTGGCTGTGTCTGTGTCCTGTGCTaGCAATCACAATGTTATCTCCTGCCTTCCATGTCACTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: WSASHSLLGCVCVLC*QSQCYLLPSMSLLL
Trigger: AAGAAGCAGTGACATGGAAGGCAGGAGATAACATTGTGATTGCAAGCACAGGACACAGACACAGCCAAGCAGAGAATGAGAAGCGGACCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp TTGTCCAAGAGAGTCAGTAATTTCCTGGAGCTCAGACAACTGCATTaGACCTGTGGTAGAATTGCTCAAGAACTGAGTGGGAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: LSKRVSNFLELRQLH*TCGRIAQELSGSSP
Trigger: GGGGCTGCTCCCACTCAGTTCTTGAGCAATTCTACCACAGGTCAAATGCAGTTGTCTGAGCTCCAGGAAATTACTGACTCTCTTGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp GCCAAGCCCTTAGACCCAACAACAACACTGAGAGAATaGAGTCCAGCTTCTAGTGGAGTCATGAGGACAGTA +
Preference number: 6 (lower is better)
Translates to: AKPLDPTTTLRE*SPASSGVMRTV
Trigger: TACTGTCCTCATGACTCCACTAGAAGCTGGACTTCATTCTCTCAGTGTTGTTGTTGGGTCTAAGGGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp GAGTCTTTCCCGTTGACCACACTCACTCCACAGACTTaGTCATGTCCCTTGCCATTGTTAGGAGGAATCACA +
Preference number: 6 (lower is better)
Translates to: ESFPLTTLTPQT*SCPLPLLGGIT
Trigger: TGTGATTCCTCCTAACAATGGCAAGGGACATGATCAAGTCTGTGGAGTGAGTGTGGTCAACGGGAAAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp CCATTCAGCTCCTTTTTGACAGTTCCACACAGTGAGTaGGTTAAAGATGGCAGGCACTGGCACTGTAGAGGT +
Preference number: 6 (lower is better)
Translates to: PFSSFLTVPHSE*VKDGRHWHCRG
Trigger: ACCTCTACAGTGCCAGTGCCTGCCATCTTTAACTCACTCACTGTGTGGAACTGTCAAAAAGGAGCTGAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp GTAAGCGGCTGGTCGTTTCCTGGGAATTGGTTTTCTTaGTGGTGGATGAACTGGAAAGCAGTCTTGGAGAAC +
Preference number: 6 (lower is better)
Translates to: VSGWSFPGNWFS*WWMNWKAVLEN
Trigger: GTTCTCCAAGACTGCTTTCCAGTTCATCCACCATCAAGAAAACCAATTCCCAGGAAACGACCAGCCGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CCGATAATGTTGGAATCATTGATCTGCAGAAGAGGTTaGTTTCCACGGGGGCTTGTCCATCTGATGCTCCAT +
Preference number: 6 (lower is better)
Translates to: PIMLESLICRRG*FPRGLVHLMLH
Trigger: ATGGAGCATCAGATGGACAAGCCCCCGTGGAAAGCAACCTCTTCTGCAGATCAATGATTCCAACATTATCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CTCCAACATAGGGAGCCAGGATCCTCTTGGTCTCAATaGCAGCCTCATTGTTGTTCACCATCACAAAGTTGT +
Preference number: 6 (lower is better)
Translates to: LQHREPGSSWSQ*QPHCCSPSQSC
Trigger: ACAACTTTGTGATGGTGAACAACAATGAGGCTGGCATTGAGACCAAGAGGATCCTGGCTCCCTATGTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp TCTGTCACTTTGGGAATTGTCTCAGAGCTACCTTTGTaGGAATCTGCTGCACACCAAAGCAGCCCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: SVTLGIVSELPL*ESAAHQSSPKR
Trigger: TCTCTTTGGGCTGCTTTGGTGTGCAGCAGATTCCCACAAAGGTAGCTCTGAGACAATTCCCAAAGTGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp ATACAGCTGAGGTGGGAGAAAATCCAGAGCCTGCTATaGTTAGAATCGTGCTTTCTGCATAGGATCCTTCGG +
Preference number: 6 (lower is better)
Translates to: IQLRWEKIQSLL*LESCFLHRILR
Trigger: CCGAAGGATCCTATGCAGAAAGCACGATTCTAACCATAGCAGGCTCTGGATTTTCTCCCACCTCAGCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp TGTACAGTTAAAGTCCATTCTCCTGCATTTGCCGTATaGGTCAAGCGAGTCCAGACCACAGGAATAGGCAGA +
Preference number: 6 (lower is better)
Translates to: CTVKVHSPAFAV*VKRVQTTGIGR
Trigger: TCTGCCTATTCCTGTGGTCTGGACTCGCTTGACCCATACGGCAAATGCAGGAGAATGGACTTTAACTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp GGCAGGTGGAAAGATACAAAGATGACAGTAGCAGTGTaGACCTCCACAGGTGTAGTTCCTTTCAGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: GRWKDTKMTVAV*TSTGVVPFRKR
Trigger: CCTTTTCCTGAAAGGAACTACACCTGTGGAGGTCCACACTGCTACTGTCATCTTTGTATCTTTCCACCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp ACTTCTGTCACTTTGGGAATTGTCTCAGAGCTACCTTaGTGGGAATCTGCTGCACACCAAAGCAGCCCAAAG +
Preference number: 6 (lower is better)
Translates to: TSVTLGIVSELP*WESAAHQSSPK
Trigger: CTTTGGGCTGCTTTGGTGTGCAGCAGATTCCCACAAAGGTAGCTCTGAGACAATTCCCAAAGTGACAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TCCGATAATGTTGGAATCATTGATCTGCAGAAGAGGTaGCTTTCCACGGGGGCTTGTCCATCTGATGCTCCA +
Preference number: 6 (lower is better)
Translates to: SDNVGIIDLQKR*LSTGACPSDAP
Trigger: TGGAGCATCAGATGGACAAGCCCCCGTGGAAAGCAACCTCTTCTGCAGATCAATGATTCCAACATTATCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GGTACTCAAATGCAACAGAGGAGACAGCAGAGCCTTTaGTCTTATGAAGCATCGTCACAGGGAAAATGCCCC +
Preference number: 6 (lower is better)
Translates to: GTQMQQRRQQSL*SYEASSQGKCP
Trigger: GGGGCATTTTCCCTGTGACGATGCTTCATAAGACAAAAGGCTCTGCTGTCTCCTCTGTTGCATTTGAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CTGCTTCTTGTACAGTTAAAGTCCATTCTCCTGCATTaGCCGTATGGGTCAAGCGAGTCCAGACCACAGGAA +
Preference number: 6 (lower is better)
Translates to: LLLVQLKSILLH*PYGSSESRPQE
Trigger: TTCCTGTGGTCTGGACTCGCTTGACCCATACGGCAAATGCAGGAGAATGGACTTTAACTGTACAAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp GCAGAATCCGTCCAAGTGGCACCCATGTACCCTGGGGTATGCTCATaGTATTCAAGTATATCTTCAAGATGTGCTGGCCGGCTATTATTC +
Preference number: 6 (lower is better)
Translates to: AESVQVAPMYPGVCS*YSSISSRCAGRLLF
Trigger: GAATAATAGCCGGCCAGCACATCTTGAAGATATACTTGAATACAATGAGCATACCCCAGGGTACATGGGTGCCACTTGGACGGATTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp ATCTGGGGGCACCAAAAATCCACTGATGCGTGCAACAAATGTGTCTaGTTCTATAGGCCAAACATAGGAAGCAGAATCCGTCCAAGTGGC +
Preference number: 6 (lower is better)
Translates to: IWGHQKSTDACNKCV*FYRPNIGSRIRPSG
Trigger: GCCACTTGGACGGATTCTGCTTCCTATGTTTGGCCTATAGAACAAGACACATTTGTTGCACGCATCAGTGGATTTTTGGTGCCCCCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp GTCTTCGTGTCTCTGTGTCAGAATCCAGGCTTTCCAGTACCATCATaGCATATTCCATTCCAGAACACTGATAGCTCTGCCACTCTGGGA +
Preference number: 6 (lower is better)
Translates to: VFVSLCQNPGFPVPS*HIPFQNTDSSATLG
Trigger: TCCCAGAGTGGCAGAGCTATCAGTGTTCTGGAATGGAATATGCAATGATGGTACTGGAAAGCCTGGATTCTGACACAGAGACACGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp GTTAAAGATGGCAGGCACTGGCACTGTAGAGGTACAAGATCCTGTTaGCATGGGGAAATACTCTTCAAAAATCCACAGTCCAAACCACCC +
Preference number: 6 (lower is better)
Translates to: VKDGRHWHCRGTRSC*HGEILFKNPQSKPP
Trigger: GGGTGGTTTGGACTGTGGATTTTTGAAGAGTATTTCCCCATGCAAACAGGATCTTGTACCTCTACAGTGCCAGTGCCTGCCATCTTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp AAGTGTTATTTTCTGCAACTGGCACTCCATCCACACTaGCTCGAACAGAGTAGGTGTCTTCTGGCATTGCTC +
Preference number: 6 (lower is better)
Translates to: KCYFLQLALHPH*LEQSRCLLALL
Trigger: GAGCAATGCCAGAAGACACCTACTCTGTTCGAGTCAGTGTGGATGGAGTGCCAGTTGCAGAAAATAACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp AATCAGGCCAGACATGTGAGATCTGACTCCGATAAATaGAGTGGGATCCCTCACCCTCTAGATTCTGTGCTA +
Preference number: 6 (lower is better)
Translates to: NQARHVRSDSDK*SGIPHPLDSVL
Trigger: TAGCACAGAATCTAGAGGGTGAGGGATCCCACTTCATTTATCGGAGTCAGATCTCACATGTCTGGCCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp GTCAGCGACAAGGTGTATGTAAATAGCTTCGTGGAATaGGATGAGTCTTTCCCGTTGACCACACTCACTCCA +
Preference number: 6 (lower is better)
Translates to: VSDKVYVNSFVE*DESFPLTTLTP
Trigger: TGGAGTGAGTGTGGTCAACGGGAAAGACTCATCTCATTCCACGAAGCTATTTACATACACCTTGTCGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp GCCATCCACCCTGACATATGGGTCAGTCGTTTCTTCTaGAAGGGAACAATGCTAGTGCCAAAAGAGTCTGAA +
Preference number: 6 (lower is better)
Translates to: AIHPDIWVSRFF*KGTMLVPKESE
Trigger: TTCAGACTCTTTTGGCACTAGCATTGTTCCCTTTCAGAAGAAACGACTGACCCATATGTCAGGGTGGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp TACAGCTGGGTTTTTCAGGGAGTAACGGCCACAATATaGATCTGTTTCGGCCGTCTTCTGCCCTCTATTAAT +
Preference number: 6 (lower is better)
Translates to: YSWVFQGVTATI*ICFGRLLPSIN
Trigger: ATTAATAGAGGGCAGAAGACGGCCGAAACAGATGCATATTGTGGCCGTTACTCCCTGAAAAACCCAGCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp TGGGAGAAAATCCAGAGCCTGCTATGGTTAGAATCGTaGTTTCTGCATAGGATCCTTCGGAAGGTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: WEKIQSLLWLES*FLHRILRKVLL
Trigger: CAACAACACCTTCCGAAGGATCCTATGCAGAAAGCACGATTCTAACCATAGCAGGCTCTGGATTTTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp AGACCAATATGGTTGAATTCCATGGATCAAATCCCATaGCTGTCACAGTCAAGGTTTGCCCACCACCAAAGC +
Preference number: 6 (lower is better)
Translates to: RPIWLNSMDQIP*LSQSRFAHHQS
Trigger: GCTTTGGTGGTGGGCAAACCTTGACTGTGACAGGCATGGGATTTGATCCATGGAATTCAACCATATTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GCAGGCACTGGCACTGTAGAGGTACAAGATCCTGTTTaGATGGGGAAATACTCTTCAAAAATCCACAGTCCA +
Preference number: 6 (lower is better)
Translates to: AGTGTVEVQDPV*MGKYSSKIHSP
Trigger: TGGACTGTGGATTTTTGAAGAGTATTTCCCCATGCAAACAGGATCTTGTACCTCTACAGTGCCAGTGCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp TCACCAGCGTCACGTTATAGATATGCACGCTCTCCGTaGTCTGAAAATAAATTCCATAGTCCCAGCATGTCC +
Preference number: 6 (lower is better)
Translates to: SPASRYRYARSP*SENKFHSPSMS
Trigger: GGACATGCTGGGACTATGGAATTTATTTTCAGACCACGGAGAGCGTGCATATCTATAACGTGACGCTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GTATTGTCAATAGGGTGCCACCTTCAGTGCTGCCTTTaGATGGTGAGACCATCACGACCTCTGGATATGTTT +
Preference number: 6 (lower is better)
Translates to: VLSIGCHLQCCL*MVRPSRPLDMF
Trigger: AAACATATCCAGAGGTCGTGATGGTCTCACCATCAAAAGGCAGCACTGAAGGTGGCACCCTATTGACAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TCAACCTTTAGGCCTCTTCCACCTGGATATGTAGCTTaGAGGATGTGTGGTTTGGGAGGAGTCTTGCAGTAT +
Preference number: 6 (lower is better)
Translates to: STFRPLPPGYVA*RMCGLGGVLQY
Trigger: ATACTGCAAGACTCCTCCCAAACCACACATCCTCAAAGCTACATATCCAGGTGGAAGAGGCCTAAAGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GGCTGGAATTCCATTGACATAGACTTCAACCTGTGGTaGCTGATTCAGTGTACGAAGCATGTCTCCAGGGAT +
Preference number: 6 (lower is better)
Translates to: GWNSIDIDFNLW*LIQCTKHVSRD
Trigger: ATCCCTGGAGACATGCTTCGTACACTGAATCAGCAACCACAGGTTGAAGTCTATGTCAATGGAATTCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GTGCCTGGCTTCAGCTGGAAAAACATTAATGACTCCTaGGAGAGATATGGAGTGAGCCTCATCAACATACCC +
Preference number: 6 (lower is better)
Translates to: VPGFSWKNINDS*ERYGVSLINIP
Trigger: GGGTATGTTGATGAGGCTCACTCCATATCTCTCCAAGGAGTCATTAATGTTTTTCCAGCTGAAGCCAGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp ACCACATCTTTTTCAAGTAAAGATACTGGGGAAGGCTaGTTGAATGCTAGCCGGTGGAAGCTGACAGAGGCA +
Preference number: 6 (lower is better)
Translates to: TTSFSSKDTGEG*LNASRWKLTEA
Trigger: TGCCTCTGTCAGCTTCCACCGGCTAGCATTCAACAAGCCTTCCCCAGTATCTTTACTTGAAAAAGATGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TGTAAGCGGCTGGTCGTTTCCTGGGAATTGGTTTTCTaGATGGTGGATGAACTGGAAAGCAGTCTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: CKRLVVSWELVF*MVDELESSLGE
Trigger: TTCTCCAAGACTGCTTTCCAGTTCATCCACCATCAAGAAAACCAATTCCCAGGAAACGACCAGCCGCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp TTAGGTATAACTTCTGTCACTTTGGGAATTGTCTCAGAGCTACCTTaGTGGGAATCTGCTGCACACCAAAGCAGCCCAAAGAGAAACCAG +
Preference number: 6 (lower is better)
Translates to: LGITSVTLGIVSELP*WESAAHQSSPKRNQ
Trigger: CTGGTTTCTCTTTGGGCTGCTTTGGTGTGCAGCAGATTCCCACAAAGGTAGCTCTGAGACAATTCCCAAAGTGACAGAAGTTATACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp GTGGTAACTGTTACATTAGCCTTTTCTCCGATAATGTTGGAATCATaGATCTGCAGAAGAGGTTGCTTTCCACGGGGGCTTGTCCATCTG +
Preference number: 6 (lower is better)
Translates to: VVTVTLAFSPIMLES*ICRRGCFPRGLVHL
Trigger: CAGATGGACAAGCCCCCGTGGAAAGCAACCTCTTCTGCAGATCAATGATTCCAACATTATCGGAGAAAAGGCTAATGTAACAGTTACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp ACAGCAACTGGTACATGTCCAGCACTTCCATTCAGAATCTGGCACTaGATCTCATTTTCCTCCACAGAGAGAAGAGAGCATCTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: TATGTCPALPFRIWH*ISFSSTERREHLVE
Trigger: TTCTACCAGATGCTCTCTTCTCTCTGTGGAGGAAAATGAGATCAAGTGCCAGATTCTGAATGGAAGTGCTGGACATGTACCAGTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp ACCATAAATTGTAAGCGGCTGGTCGTTTCCTGGGAATTGGTTTTCTaGATGGTGGATGAACTGGAAAGCAGTCTTGGAGAACACAGCAGT +
Preference number: 6 (lower is better)
Translates to: TINCKRLVVSWELVF*MVDELESSLGEHSS
Trigger: ACTGCTGTGTTCTCCAAGACTGCTTTCCAGTTCATCCACCATCAAGAAAACCAATTCCCAGGAAACGACCAGCCGCTTACAATTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp ACCCACAGTCACCTGAACATTTGGCTGGAATTCCATTaGCATAGACTTCAACCTGTGGTTGCTGATTCAGTG +
Preference number: 6 (lower is better)
Translates to: THSHLNIWLEFH*HRLQPVVADSV
Trigger: CACTGAATCAGCAACCACAGGTTGAAGTCTATGTCAATGGAATTCCAGCCAAATGTTCAGGTGACTGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp GTACATGTCCAGCACTTCCATTCAGAATCTGGCACTTaGTCTCATTTTCCTCCACAGAGAGAAGAGAGCATC +
Preference number: 6 (lower is better)
Translates to: VHVQHFHSESGT*SHFPPQREESI
Trigger: GATGCTCTCTTCTCTCTGTGGAGGAAAATGAGATCAAGTGCCAGATTCTGAATGGAAGTGCTGGACATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GAATCCGTCCAAGTGGCACCCATGTACCCTGGGGTATaGTCATTGTATTCAAGTATATCTTCAAGATGTGCT +
Preference number: 6 (lower is better)
Translates to: ESVQVAPMYPGV*SLYSSISSRCA
Trigger: AGCACATCTTGAAGATATACTTGAATACAATGAGCATACCCCAGGGTACATGGGTGCCACTTGGACGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp TGCTTCGTGTTCCCAACGAAAACCACCCTTATTGGGTaGATGAAAATACCGGATGCCAACAAACTTAGCACT +
Preference number: 6 (lower is better)
Translates to: CFVFPTKTTLIG*MKIPDANKLST
Trigger: AGTGCTAAGTTTGTTGGCATCCGGTATTTTCATGCACCCAATAAGGGTGGTTTTCGTTGGGAACACGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CTCTGTGTCAGAATCCAGGCTTTCCAGTACCATCATTaGATATTCCATTCCAGAACACTGATAGCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: LCVRIQAFQYHH*IFHSRTLIALP
Trigger: TGGCAGAGCTATCAGTGTTCTGGAATGGAATATGCAATGATGGTACTGGAAAGCCTGGATTCTGACACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp TTTGGCTGGAATTCCATTGACATAGACTTCAACCTGTaGTTGCTGATTCAGTGTACGAAGCATGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: FGWNSIDIDFNL*LLIQCTKHVSR
Trigger: CCTGGAGACATGCTTCGTACACTGAATCAGCAACCACAGGTTGAAGTCTATGTCAATGGAATTCCAGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp GCAACTGGTACATGTCCAGCACTTCCATTCAGAATCTaGCACTTGATCTCATTTTCCTCCACAGAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: ATGTCPALPFRI*HLISFSSTERR
Trigger: TCTTCTCTCTGTGGAGGAAAATGAGATCAAGTGCCAGATTCTGAATGGAAGTGCTGGACATGTACCAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp CCAGTGATTGATGTTACTCCTAAAGCCACACAGGCATaGCGGTCAAAATTCATAAAGTGCACAGACGACACA +
Preference number: 6 (lower is better)
Translates to: PVIDVTPKATQA*RSKFIKCTDDT
Trigger: TGTGTCGTCTGTGCACTTTATGAATTTTGACCGCCATGCCTGTGTGGCTTTAGGAGTAACATCAATCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp AATCTGTCCCAGGTTAAGAAATGTCACAGCATATCTTaGATCGGTGCTATCCCTGTAGCCTTCTTGACCACT +
Preference number: 6 (lower is better)
Translates to: NLSQVKKCHSIS*IGAIPVAFLTT
Trigger: AGTGGTCAAGAAGGCTACAGGGATAGCACCGATCCAAGATATGCTGTGACATTTCTTAACCTGGGACAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GGTACATGTCCAGCACTTCCATTCAGAATCTGGCACTaGATCTCATTTTCCTCCACAGAGAGAAGAGAGCAT +
Preference number: 6 (lower is better)
Translates to: GTCPALPFRIWH*ISFSSTERREH
Trigger: ATGCTCTCTTCTCTCTGTGGAGGAAAATGAGATCAAGTGCCAGATTCTGAATGGAAGTGCTGGACATGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp AAATTTTGTGGGACACAGAAGGTGGCATGTAGACCATaGAAAAGATGCTCATCCCGTTGTTCACCAGCGTCA +
Preference number: 6 (lower is better)
Translates to: KFCGTQKVACRP*KRCSSRCSPAS
Trigger: TGACGCTGGTGAACAACGGGATGAGCATCTTTTCAATGGTCTACATGCCACCTTCTGTGTCCCACAAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TCTCTGTGTCAGAATCCAGGCTTTCCAGTACCATCATaGCATATTCCATTCCAGAACACTGATAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SLCQNPGFPVPS*HIPFQNTDSSA
Trigger: GGCAGAGCTATCAGTGTTCTGGAATGGAATATGCAATGATGGTACTGGAAAGCCTGGATTCTGACACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp AGAGTCAGTAATTTCCTGGAGCTCAGACAACTGCATTaGACCTGTGGTAGAATTGCTCAAGAACTGAGTGGG +
Preference number: 6 (lower is better)
Translates to: RVSNFLELRQLH*TCGRIAQELSG
Trigger: CCCACTCAGTTCTTGAGCAATTCTACCACAGGTCAAATGCAGTTGTCTGAGCTCCAGGAAATTACTGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp GTTGCTCCGTTTATGCTGCCATATTTAGGTATAACTTCTGTCACTTaGGGAATTGTCTCAGAGCTACCTTTGTGGGAATCTGCTGCACAC +
Preference number: 6 (lower is better)
Translates to: VAPFMLPYLGITSVT*GIVSELPLWESAAH
Trigger: GTGTGCAGCAGATTCCCACAAAGGTAGCTCTGAGACAATTCCCAAAGTGACAGAAGTTATACCTAAATATGGCAGCATAAACGGAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp TTCCAGACCTCAACCTTTAGGCCTCTTCCACCTGGATATGTAGCTTaGAGGATGTGTGGTTTGGGAGGAGTCTTGCAGTATATAGTATTT +
Preference number: 6 (lower is better)
Translates to: FQTSTFRPLPPGYVA*RMCGLGGVLQYIVF
Trigger: AAATACTATATACTGCAAGACTCCTCCCAAACCACACATCCTCAAAGCTACATATCCAGGTGGAAGAGGCCTAAAGGTTGAGGTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp ACTCATTGGACCATAAATTGTAAGCGGCTGGTCGTTTCCTGGGAATaGGTTTTCTTGATGGTGGATGAACTGGAAAGCAGTCTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: THWTINCKRLVVSWE*VFLMVDELESSLGE
Trigger: TTCTCCAAGACTGCTTTCCAGTTCATCCACCATCAAGAAAACCAATTCCCAGGAAACGACCAGCCGCTTACAATTTATGGTCCAATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp AAATTCATAAAGTGCACAGACGACACAGTCAGGCCTTaGCTAAATGGGAGAACCAGGCCTTTTGAAGTGCAA +
Preference number: 6 (lower is better)
Translates to: KFIKCTDDTVRP*LNGRTRPFEVQ
Trigger: TTGCACTTCAAAAGGCCTGGTTCTCCCATTTAGTCAAGGCCTGACTGTGTCGTCTGTGCACTTTATGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp AATGTGATTTGCATTTGGAATCAGAGCCATCCACCCTaGCATATGGGTCAGTCGTTTCTTCTGAAAGGGAAC +
Preference number: 6 (lower is better)
Translates to: NVICIWNQSHPP*HMGQSFLLKGN
Trigger: GTTCCCTTTCAGAAGAAACGACTGACCCATATGTCAGGGTGGATGGCTCTGATTCCAAATGCAAATCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp ATCTATGTTTGGCAAAAGTACAAACCGCCTGTCAAATaGTTTGGTCAGTGTGTTGATAGCAGTGCCCAGGTT +
Preference number: 6 (lower is better)
Translates to: IYVWQKYKPPVK*FGQCVDSSAQV
Trigger: AACCTGGGCACTGCTATCAACACACTGACCAAAGCATTTGACAGGCGGTTTGTACTTTTGCCAAACATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp GTTTGGCTTAACATCTGTCGAGTCAAAAAGTACAGCTaGGTTTTTCAGGGAGTAACGGCCACAATATGCATC +
Preference number: 6 (lower is better)
Translates to: VWLNICRVKKYS*VFQGVTATICI
Trigger: GATGCATATTGTGGCCGTTACTCCCTGAAAAACCCAGCTGTACTTTTTGACTCGACAGATGTTAAGCCAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp GTGCCACCATACAAAGAGCCTCTCTGGGGAAACATGTaGATGACTTCCAAAATGTACAGTATGGAAGCATTT +
Preference number: 6 (lower is better)
Translates to: VPPYKEPLWGNM*MTSKMYSMEAF
Trigger: AAATGCTTCCATACTGTACATTTTGGAAGTCATCCACATGTTTCCCCAGAGAGGCTCTTTGTATGGTGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp GGTCACTTCTCCCTGACACCAAATAATAGAGAGTACTaGTGTTTGCTTCAAGATGCCAGTCTCCATTCTTAC +
Preference number: 6 (lower is better)
Translates to: GHFSLTPNNREY*CLLQDASLHSY
Trigger: GTAAGAATGGAGACTGGCATCTTGAAGCAAACACCAGTACTCTCTATTATTTGGTGTCAGGGAGAAGTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp CATTGGACCATAAATTGTAAGCGGCTGGTCGTTTCCTaGGAATTGGTTTTCTTGATGGTGGATGAACTGGAA +
Preference number: 6 (lower is better)
Translates to: HWTINCKRLVVS*ELVFLMVDELE
Trigger: TTCCAGTTCATCCACCATCAAGAAAACCAATTCCCAGGAAACGACCAGCCGCTTACAATTTATGGTCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp CACCAATTAATCTCCCTCCCTGTACTGATATGTAGGTaGCATTTAAAACAACTCTTCTATAGGTGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: HQLISLPVLICR*HLKQLFYRWGL
Trigger: CAGGCCCCACCTATAGAAGAGTTGTTTTAAATGCCACCTACATATCAGTACAGGGAGGGAGATTAATTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp GCTTCATTGTTAAACCAGTTTTCCATGGAATTAGCCTaGCTTGAGCATGGTTCACCATCAATGCGGTATCCT +
Preference number: 6 (lower is better)
Translates to: ASLLNQFSMELA*LEHGSPSMRYP
Trigger: AGGATACCGCATTGATGGTGAACCATGCTCAAGCCAGGCTAATTCCATGGAAAACTGGTTTAACAATGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp GAGCAGCCCCAATCTCAAATTCCATTATGTGTCCTGTaGATCGCTTCTTTCTCAGACTTGCTCCTATTATTC +
Preference number: 6 (lower is better)
Translates to: EQPQSQIPLCVL*IASFSDLLLLF
Trigger: GAATAATAGGAGCAAGTCTGAGAAAGAAGCGATCCACAGGACACATAATGGAATTTGAGATTGGGGCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CCAACAGTAACTGTGGTGTTTCCAGGAGAAAATCCATaGCCTGTTATCATCAAAGTCGTTCCACCAGCAATG +
Preference number: 6 (lower is better)
Translates to: PTVTVVFPGENP*PVIIKVVPPAM
Trigger: CATTGCTGGTGGAACGACTTTGATGATAACAGGCAATGGATTTTCTCCTGGAAACACCACAGTTACTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GTGCCAATGTATTGGGTATCGTCCCAAACGGAAAGATaGACCAGCATGGAACACCTCTACGTATTCTATTCT +
Preference number: 6 (lower is better)
Translates to: VPMYWVSSQTER*TSMEHLYVFYS
Trigger: AGAATAGAATACGTAGAGGTGTTCCATGCTGGTCAATCTTTCCGTTTGGGACGATACCCAATACATTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TCCTGCCAATCCACAGCATCCACTAGAGATAAGATTTaGGAGCCTGCTTCCGCAGTTTCTAACAGTTTAGTT +
Preference number: 6 (lower is better)
Translates to: SCQSTASTRDKI*EPASAVSNSLV
Trigger: AACTAAACTGTTAGAAACTGCGGAAGCAGGCTCCAAAATCTTATCTCTAGTGGATGCTGTGGATTGGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp GTTTCCCAATTCAGTATTGTCAGCTCCATAGTTGAACTGACTTGCTaGAGAAAAACCTTCTCCCTTGATGGTCAGTCTTGTTGCTCCGTT +
Preference number: 6 (lower is better)
Translates to: VSQFSIVSSIVELTC*RKTFSLDGQSCCSV
Trigger: AACGGAGCAACAAGACTGACCATCAAGGGAGAAGGTTTTTCTCAAGCAAGTCAGTTCAACTATGGAGCTGACAATACTGAATTGGGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp TCCAGAGTAATACGCAATCCTCACCTTGTCTTCTGTGCGCCCAGTTaGGCTGAAATAAATAGCATAGCGGTCATCACCTCTGATATAAAA +
Preference number: 6 (lower is better)
Translates to: SRVIRNPHLVFCAPS*AEINSIAVITSDIK
Trigger: TTTTATATCAGAGGTGATGACCGCTATGCTATTTATTTCAGCCAAACTGGGCGCACAGAAGACAAGGTGAGGATTGCGTATTACTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp AGTAATCATGGCATCCCATGTAAACCCACAGTCACCTaGACATTTGGCTGGAATTCCATTGACATAGACTTC +
Preference number: 6 (lower is better)
Translates to: SNHGIPCKPTVT*TFGWNSIDIDF
Trigger: GAAGTCTATGTCAATGGAATTCCAGCCAAATGTTCAGGTGACTGTGGGTTTACATGGGATGCCATGATTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TTTGTCATCATAAGTTACACTTCCGGGACTGGAGACTaGGAAAATTCTGTACCCTATACCCCTAAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: FVIISYTSGTGD*ENSVPYTPKKG
Trigger: CCCTTTCTTAGGGGTATAGGGTACAGAATTTTCTCAGTCTCCAGTCCCGGAAGTGTAACTTATGATGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp CATGCTCTCCCACAGTGCACTGTAACACAGTGTCATTaGCAGTGGTCACATTACATACACTCTCTTTTATCA +
Preference number: 6 (lower is better)
Translates to: HALPQCTVTQCH*QWSHYIHSLLS
Trigger: TGATAAAAGAGAGTGTATGTAATGTGACCACTGTCAATGACACTGTGTTACAGTGCACTGTGGGAGAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp GTCAACTGCACATTCAGAGTTACAGACCAATATGGTTaGATTCCATGGATCAAATCCCATGCCTGTCACAGT +
Preference number: 6 (lower is better)
Translates to: VNCTFRVTDQYG*IPWIKSHACHS
Trigger: ACTGTGACAGGCATGGGATTTGATCCATGGAATTCAACCATATTGGTCTGTAACTCTGAATGTGCAGTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TGCCAATGTATTGGGTATCGTCCCAAACGGAAAGATTaGCCAGCATGGAACACCTCTACGTATTCTATTCTT +
Preference number: 6 (lower is better)
Translates to: CQCIGYRPKRKD*PAWNTSTYSIL
Trigger: AAGAATAGAATACGTAGAGGTGTTCCATGCTGGTCAATCTTTCCGTTTGGGACGATACCCAATACATTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TTCGGTCCGTCTGGAAAAGCCCATTCTGGGGTAGAATaGTTTCCTCGAAGAACAATCTGTAATTCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: FGPSGKAHSGVE*FPRRTICNSPL
Trigger: TAAAGGAGAATTACAGATTGTTCTTCGAGGAAATCATTCTACCCCAGAATGGGCTTTTCCAGACGGACCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp ATCAGAATCTGGGGGCACCAAAAATCCACTGATGCGTaGAACAAATGTGTCTTGTTCTATAGGCCAAACATA +
Preference number: 6 (lower is better)
Translates to: IRIWGHQKSTDA*NKCVLFYRPNI
Trigger: TATGTTTGGCCTATAGAACAAGACACATTTGTTGCACGCATCAGTGGATTTTTGGTGCCCCCAGATTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CTGATAGCTCTGCCACTCTGGGATGTATTTACAGGTTaGATCTCTAATAATCCCTTTATGAGGTGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: LIALPLWDVFTG*ISNNPFMRCFL
Trigger: GAGAAAGCACCTCATAAAGGGATTATTAGAGATGCAACCTGTAAATACATCCCAGAGTGGCAGAGCTATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CATTATGTGTCCTGTGGATCGCTTCTTTCTCAGACTTaGTCCTATTATTCTGCTGACACGGATTTTGTCACT +
Preference number: 6 (lower is better)
Translates to: HYVSCGSLLSQT*SYYSADTDFVT
Trigger: AGTGACAAAATCCGTGTCAGCAGAATAATAGGAGCAAGTCTGAGAAAGAAGCGATCCACAGGACACATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp CAGTGGTCTTACATGTCACAGACCCTGTATCTCCATTaGCATGATCGAGTTTTAGACCATACAAATCATCAG +
Preference number: 6 (lower is better)
Translates to: QWSYMSQTLYLH*HDRVLDHTNHQ
Trigger: CTGATGATTTGTATGGTCTAAAACTCGATCATGCCAATGGAGATACAGGGTCTGTGACATGTAAGACCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp CGGAATTCGTTTTTGGCAAATGTTTCGGTCAAAAGATaGGCCATCAGGGTGGTCATTCATTCTGTACCAAAA +
Preference number: 6 (lower is better)
Translates to: RNSFLANVSVKR*AIRVVIHSVPK
Trigger: TTTTGGTACAGAATGAATGACCACCCTGATGGCCCATCTTTTGACCGAAACATTTGCCAAAAACGAATTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CACCAAAAATCCACTGATGCGTGCAACAAATGTGTCTaGTTCTATAGGCCAAACATAGGAAGCAGAATCCGT +
Preference number: 6 (lower is better)
Translates to: HQKSTDACNKCV*FYRPNIGSRIR
Trigger: ACGGATTCTGCTTCCTATGTTTGGCCTATAGAACAAGACACATTTGTTGCACGCATCAGTGGATTTTTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TGTGCTCAGATGCCTTTCAAGTTCACAGTGTTTCTTTaGGGCATTCCATGCTGTATTTTTGGGACAGACCAA +
Preference number: 6 (lower is better)
Translates to: CAQMPFKFTVFL*GIPCCIFGTDQ
Trigger: TTGGTCTGTCCCAAAAATACAGCATGGAATGCCCAAAAGAAACACTGTGAACTTGAAAGGCATCTGAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp TCCTTTATTGTGGTAACTGTTACATTAGCCTTTTCTCCGATAATGTaGGAATCATTGATCTGCAGAAGAGGTTGCTTTCCACGGGGGCTT +
Preference number: 6 (lower is better)
Translates to: SFIVVTVTLAFSPIM*ESLICRRGCFPRGL
Trigger: AAGCCCCCGTGGAAAGCAACCTCTTCTGCAGATCAATGATTCCAACATTATCGGAGAAAAGGCTAATGTAACAGTTACCACAATAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp CTTGTTGGAATATTGGATATCACATTTGCTGTTGCCTACGAAGACTaGAACACCCTGTGTGTTTTCACTGAATCCAGATCCTGTGACTGT +
Preference number: 6 (lower is better)
Translates to: LVGILDITFAVAYED*NTLCVFTESRSCDC
Trigger: ACAGTCACAGGATCTGGATTCAGTGAAAACACACAGGGTGTTCAAGTCTTCGTAGGCAACAGCAAATGTGATATCCAATATTCCAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp AAAGTAGTTTTCACCAGGGACAGTGGAACCCAAGTTAGGAAGGAATaGTTCTGTGCTCAGATGCCTTTCAAGTTCACAGTGTTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: KVVFTRDSGTQVRKE*FCAQMPFKFTVFLL
Trigger: CAAAAGAAACACTGTGAACTTGAAAGGCATCTGAGCACAGAACAATTCCTTCCTAACTTGGGTTCCACTGTCCCTGGTGAAAACTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TATTGGATATCACATTTGCTGTTGCCTACGAAGACTTaGACACCCTGTGTGTTTTCACTGAATCCAGATCCT +
Preference number: 6 (lower is better)
Translates to: YWISHLLLPTKT*TPCVFSLNPDP
Trigger: AGGATCTGGATTCAGTGAAAACACACAGGGTGTTCAAGTCTTCGTAGGCAACAGCAAATGTGATATCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CAATTCAGTATTGTCAGCTCCATAGTTGAACTGACTTaGTTGAGAAAAACCTTCTCCCTTGATGGTCAGTCT +
Preference number: 6 (lower is better)
Translates to: QFSIVSSIVELT*LRKTFSLDGQS
Trigger: AGACTGACCATCAAGGGAGAAGGTTTTTCTCAAGCAAGTCAGTTCAACTATGGAGCTGACAATACTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GTGTCTTGTTGGAATATTGGATATCACATTTGCTGTTaGCTACGAAGACTTGAACACCCTGTGTGTTTTCAC +
Preference number: 6 (lower is better)
Translates to: VSCWNIGYHICC*LRRLEHPVCFH
Trigger: GTGAAAACACACAGGGTGTTCAAGTCTTCGTAGGCAACAGCAAATGTGATATCCAATATTCCAACAAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CGATATGTGTCTTGTTGGAATATTGGATATCACATTTaGTGTTGCCTACGAAGACTTGAACACCCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: RYVSCWNIGYHI*CCLRRLEHPVC
Trigger: ACACACAGGGTGTTCAAGTCTTCGTAGGCAACAGCAAATGTGATATCCAATATTCCAACAAGACACATATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CCTTTCAAGTTCACAGTGTTTCTTTTGGGCATTCCATaGTGTATTTTTGGGACAGACCAAGGAATTGTTCAC +
Preference number: 6 (lower is better)
Translates to: PFKFTVFLLGIP*CIFGTDQGIVH
Trigger: GTGAACAATTCCTTGGTCTGTCCCAAAAATACAGCATGGAATGCCCAAAAGAAACACTGTGAACTTGAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp AGAATGCAGCTGGGGTCACATCATCATTCAGTAGACTaGTACTTTGCTGTACAAAGACTGCCAGATTATATT +
Preference number: 6 (lower is better)
Translates to: RMQLGSHHHSVD*YFAVQRLPDYI
Trigger: AATATAATCTGGCAGTCTTTGTACAGCAAAGTACCAGTCTACTGAATGATGATGTGACCCCAGCTGCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp GTATTGTTAAAGAATTCTCCAAGCGGAATTCGTTTTTaGCAAATGTTTCGGTCAAAAGATGGGCCATCAGGG +
Preference number: 6 (lower is better)
Translates to: VLLKNSPSGIRF*QMFRSKDGPSG
Trigger: CCCTGATGGCCCATCTTTTGACCGAAACATTTGCCAAAAACGAATTCCGCTTGGAGAATTCTTTAACAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp AATTCTACTTCCATTCAAGTATGTGAGCATCGCCTTTaGAATTCTGTAGTCTCCAATTCCCAGTTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: NSTSIQVCEHRL*NSVVSNSQLAV
Trigger: AACAGCCAACTGGGAATTGGAGACTACAGAATTCCAAAGGCGATGCTCACATACTTGAATGGAAGTAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp ATATTCCATTCCAGAACACTGATAGCTCTGCCACTCTaGGATGTATTTACAGGTTGCATCTCTAATAATCCC +
Preference number: 6 (lower is better)
Translates to: IFHSRTLIALPL*DVFTGCISNNP
Trigger: GGGATTATTAGAGATGCAACCTGTAAATACATCCCAGAGTGGCAGAGCTATCAGTGTTCTGGAATGGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TTCAGTATTGTCAGCTCCATAGTTGAACTGACTTGCTaGAGAAAAACCTTCTCCCTTGATGGTCAGTCTTGT +
Preference number: 6 (lower is better)
Translates to: FSIVSSIVELTC*RKTFSLDGQSC
Trigger: ACAAGACTGACCATCAAGGGAGAAGGTTTTTCTCAAGCAAGTCAGTTCAACTATGGAGCTGACAATACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GCAATCCCATCCCAGTTTAATGTAAACGTCTCCAAATaGGGTTTTCCTTTGGTTTGTTCTGTGATACTCAGC +
Preference number: 6 (lower is better)
Translates to: AIPSQFNVNVSK*GFPLVCSVILS
Trigger: GCTGAGTATCACAGAACAAACCAAAGGAAAACCCAATTTGGAGACGTTTACATTAAACTGGGATGGGATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp ATATTGGATATCACATTTGCTGTTGCCTACGAAGACTaGAACACCCTGTGTGTTTTCACTGAATCCAGATCC +
Preference number: 6 (lower is better)
Translates to: ILDITFAVAYED*NTLCVFTESRS
Trigger: GGATCTGGATTCAGTGAAAACACACAGGGTGTTCAAGTCTTCGTAGGCAACAGCAAATGTGATATCCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CATGAACTGGAACCCATCCTGAAGGAACATGAACACTaGTCATGCAGACGATATGTGTCTTGTTGGAATATT +
Preference number: 6 (lower is better)
Translates to: HELEPILKEHEH*SCRRYVSCWNI
Trigger: AATATTCCAACAAGACACATATCGTCTGCATGACAAGTGTTCATGTTCCTTCAGGATGGGTTCCAGTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp AAACTGGTCACTTCCCATTTCTTCTCCAAACTTTCCTaGAAGGCATGTCTGTGTAGCAAATTCTCCTGTATC +
Preference number: 6 (lower is better)
Translates to: KLVTSHFFSKLS*KACLCSKFSCI
Trigger: GATACAGGAGAATTTGCTACACAGACATGCCTTCAAGGAAAGTTTGGAGAAGAAATGGGAAGTGACCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp AACTGGAAAGCAGTCTTGGAGAACACAGCAGTAAGCTaGGAAATTAATAATCACATCCTTCACACCAGGATC +
Preference number: 6 (lower is better)
Translates to: NWKAVLENTAVS*EINNHILHTRI
Trigger: GATCCTGGTGTGAAGGATGTGATTATTAATTTCCAAGCTTACTGCTGTGTTCTCCAAGACTGCTTTCCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp AGCATATCTTGGATCGGTGCTATCCCTGTAGCCTTCTaGACCACTGTGATGAAATTCCACATTACTTATTCT +
Preference number: 6 (lower is better)
Translates to: SISWIGAIPVAF*TTVMKFHITYS
Trigger: AGAATAAGTAATGTGGAATTTCATCACAGTGGTCAAGAAGGCTACAGGGATAGCACCGATCCAAGATATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp AACATGAACACTTGTCATGCAGACGATATGTGTCTTGTTGGAATATaGGATATCACATTTGCTGTTGCCTACGAAGACTTGAACACCCTG +
Preference number: 6 (lower is better)
Translates to: NMNTCHADDMCLVGI*DITFAVAYEDLNTL
Trigger: CAGGGTGTTCAAGTCTTCGTAGGCAACAGCAAATGTGATATCCAATATTCCAACAAGACACATATCGTCTGCATGACAAGTGTTCATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp AAATGTCACAGCATATCTTGGATCGGTGCTATCCCTGTAGCCTTCTaGACCACTGTGATGAAATTCCACATTACTTATTCTTGCATTTCC +
Preference number: 6 (lower is better)
Translates to: KCHSISWIGAIPVAF*TTVMKFHITYSCIS
Trigger: GGAAATGCAAGAATAAGTAATGTGGAATTTCATCACAGTGGTCAAGAAGGCTACAGGGATAGCACCGATCCAAGATATGCTGTGACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp GAATTGTTCTGTGCTCAGATGCCTTTCAAGTTCACAGTGTTTCTTTaGGGCATTCCATGCTGTATTTTTGGGACAGACCAAGGAATTGTT +
Preference number: 6 (lower is better)
Translates to: ELFCAQMPFKFTVFL*GIPCCIFGTDQGIV
Trigger: AACAATTCCTTGGTCTGTCCCAAAAATACAGCATGGAATGCCCAAAAGAAACACTGTGAACTTGAAAGGCATCTGAGCACAGAACAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp ATCTTAGTTTGTCAACTGCACATTCAGAGTTACAGACCAATATGGTaGAATTCCATGGATCAAATCCCATGCCTGTCACAGTCAAGGTTT +
Preference number: 6 (lower is better)
Translates to: ILVCQLHIQSYRPIW*NSMDQIPCLSQSRF
Trigger: AAACCTTGACTGTGACAGGCATGGGATTTGATCCATGGAATTCAACCATATTGGTCTGTAACTCTGAATGTGCAGTTGACAAACTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp AGAATGAACAGTATTGTTAAAGAATTCTCCAAGCGGAATTCGTTTTaGGCAAATGTTTCGGTCAAAAGATGGGCCATCAGGGTGGTCATT +
Preference number: 6 (lower is better)
Translates to: RMNSIVKEFSKRNSF*ANVSVKRWAIRVVI
Trigger: AATGACCACCCTGATGGCCCATCTTTTGACCGAAACATTTGCCAAAAACGAATTCCGCTTGGAGAATTCTTTAACAATACTGTTCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp GTGCTAAATGGAATTGTTGTATTTCCACTAAGGCCACCAACTTGGTaGTTATTGGAGTCCTTTAGGATAGCCTTCAAAGTAAGCGATGTA +
Preference number: 6 (lower is better)
Translates to: VLNGIVVFPLRPPTW*LLESFRIAFKVSDV
Trigger: TACATCGCTTACTTTGAAGGCTATCCTAAAGGACTCCAATAACAACCAAGTTGGTGGCCTTAGTGGAAATACAACAATTCCATTTAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp CGAGTTTTAGACCATACAAATCATCAGAATGTGGTATaGGGAGTTCACAGGGCATTCCTCCGATATAAATTC +
Preference number: 6 (lower is better)
Translates to: RVLDHTNHQNVV*GVHRAFLRYKF
Trigger: GAATTTATATCGGAGGAATGCCCTGTGAACTCCTCATACCACATTCTGATGATTTGTATGGTCTAAAACTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TTAACTTGTTCCTTGTTGACGCCAAACCCCAGTTTCTaGCTTTCACATAGATATCATGTTTTCCTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: LTCSLLTPNPSF*LSHRYHVFLEV
Trigger: TACCTCCAGGAAAACATGATATCTATGTGAAAGTCAGAAACTGGGGTTTGGCGTCAACAAGGAACAAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TTCTCCTTTGATGAGGACATTTCCATATCCTTGGATTaGGTTTGGGAAGATTCCTGTTACATAGGGAGCAAT +
Preference number: 6 (lower is better)
Translates to: FSFDEDISISLD*VWEDSCYIGSN
Trigger: ATTGCTCCCTATGTAACAGGAATCTTCCCAAACTCAATCCAAGGATATGGAAATGTCCTCATCAAAGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp TTGAGAAAAACCTTCTCCCTTGATGGTCAGTCTTGTTaGTCCGTTTATGCTGCCATATTTAGGTATAACTTC +
Preference number: 6 (lower is better)
Translates to: LRKTFSLDGQSC*SVYAAIFRYNF
Trigger: GAAGTTATACCTAAATATGGCAGCATAAACGGAGCAACAAGACTGACCATCAAGGGAGAAGGTTTTTCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp AGTACGCCCCCATCTGTGATTAGGATATTTTCTGCCTaGAGTTCAATATTAGCTTCATCAAATATCAGAGTC +
Preference number: 6 (lower is better)
Translates to: STPPSVIRIFSA*SSILASSNIRV
Trigger: GACTCTGATATTTGATGAAGCTAATATTGAACTCCAGGCAGAAAATATCCTAATCACAGATGGGGGCGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp ATGCCAGTCTCCATTCTTACTAGAATTCCAATTCAATaGGTTTGCGGAGCCATTCCTCATATCAACAACATT +
Preference number: 6 (lower is better)
Translates to: MPVSILTRIPIQ*VCGAIPHINNI
Trigger: AATGTTGTTGATATGAGGAATGGCTCCGCAAACCCATTGAATTGGAATTCTAGTAAGAATGGAGACTGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CTTCTAATGATCTTGCCACTGTCTTGGTACTTGAACTaGAGATCAATGAAGTTGGCCAGAGATCCTTTGTAT +
Preference number: 6 (lower is better)
Translates to: LLMILPLSWYLN*RSMKLARDPLY
Trigger: ATACAAAGGATCTCTGGCCAACTTCATTGATCTCAAGTTCAAGTACCAAGACAGTGGCAAGATCATTAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GTGGTAACTGTTACATTAGCCTTTTCTCCGATAATGTaGGAATCATTGATCTGCAGAAGAGGTTGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: VVTVTLAFSPIM*ESLICRRGCFP
Trigger: TGGAAAGCAACCTCTTCTGCAGATCAATGATTCCAACATTATCGGAGAAAAGGCTAATGTAACAGTTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GAAATCTCTTCCAACACTGTCCCAAAACGTTCTCCTTaGATGAGGACATTTCCATATCCTTGGATTGAGTTT +
Preference number: 6 (lower is better)
Translates to: EISSNTVPKRSP*MRTFPYPWIEF
Trigger: AAACTCAATCCAAGGATATGGAAATGTCCTCATCAAAGGAGAACGTTTTGGGACAGTGTTGGAAGAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp ACTTGTCATGCAGACGATATGTGTCTTGTTGGAATATaGGATATCACATTTGCTGTTGCCTACGAAGACTTG +
Preference number: 6 (lower is better)
Translates to: TCHADDMCLVGI*DITFAVAYEDL
Trigger: CAAGTCTTCGTAGGCAACAGCAAATGTGATATCCAATATTCCAACAAGACACATATCGTCTGCATGACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp AGTATTGTTAAAGAATTCTCCAAGCGGAATTCGTTTTaGGCAAATGTTTCGGTCAAAAGATGGGCCATCAGG +
Preference number: 6 (lower is better)
Translates to: SIVKEFSKRNSF*ANVSVKRWAIR
Trigger: CCTGATGGCCCATCTTTTGACCGAAACATTTGCCAAAAACGAATTCCGCTTGGAGAATTCTTTAACAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CCAAATCCAGCGACTACATTATTTTGTAAGACTGTATaGGTCCCTCTGTTTATCTCAATTGCTGCATGCCAA +
Preference number: 6 (lower is better)
Translates to: PNPATTLFCKTV*VPLFISIAACQ
Trigger: TTGGCATGCAGCAATTGAGATAAACAGAGGGACCAATACAGTCTTACAAAATAATGTAGTCGCTGGATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp GGAATTGTTGTATTTCCACTAAGGCCACCAACTTGGTaGTTATTGGAGTCCTTTAGGATAGCCTTCAAAGTA +
Preference number: 6 (lower is better)
Translates to: GIVVFPLRPPTW*LLESFRIAFKV
Trigger: TACTTTGAAGGCTATCCTAAAGGACTCCAATAACAACCAAGTTGGTGGCCTTAGTGGAAATACAACAATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp TCAGTTGGTTGGGGGATGGGACTGGTAATAGACATGGAAGAAATATaGAATCCAAGAATAGTACTAATTTTTCCTAGGACAACAGCTTGT +
Preference number: 6 (lower is better)
Translates to: SVGWGMGLVIDMEEI*NPRIVLIFPRTTAC
Trigger: ACAAGCTGTTGTCCTAGGAAAAATTAGTACTATTCTTGGATTCAATATTTCTTCCATGTCTATTACCAGTCCCATCCCCCAACCAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp AATGGAATTGTTGTATTTCCACTAAGGCCACCAACTTGGTTGTTATaGGAGTCCTTTAGGATAGCCTTCAAAGTAAGCGATGTAATTCCA +
Preference number: 6 (lower is better)
Translates to: NGIVVFPLRPPTWLL*ESFRIAFKVSDVIP
Trigger: TGGAATTACATCGCTTACTTTGAAGGCTATCCTAAAGGACTCCAATAACAACCAAGTTGGTGGCCTTAGTGGAAATACAACAATTCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp AGTGGTCACATTACATACACTCTCTTTTATCATCACTaGAACATCGGAGATAGCAAATCCAAGATTAGACCC +
Preference number: 6 (lower is better)
Translates to: SGHITYTLFYHH*NIGDSKSKIRP
Trigger: GGGTCTAATCTTGGATTTGCTATCTCCGATGTTTCAGTGATGATAAAAGAGAGTGTATGTAATGTGACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp ATCGCTTCTTTCTCAGACTTGCTCCTATTATTCTGCTaGCACGGATTTTGTCACTTGGTATTTTTAGGAACA +
Preference number: 6 (lower is better)
Translates to: IASFSDLLLLFC*HGFCHLVFLGT
Trigger: TGTTCCTAAAAATACCAAGTGACAAAATCCGTGTCAGCAGAATAATAGGAGCAAGTCTGAGAAAGAAGCGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp ACATCACAAGTAATCGACTGGAAAGAAGAAACTAATTaGACATGGTTTCCCAATTCAGTATTGTCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: TSQVIDWKEETN*TWFPNSVLSAP
Trigger: TGGAGCTGACAATACTGAATTGGGAAACCATGTGCAATTAGTTTCTTCTTTCCAGTCGATTACTTGTGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp ACTGAAGCCATGTCCAATGATAGTTATAAGTTCATTTaGTGTTCCGGTAGAGGGAGTAATGTTGATGATAGA +
Preference number: 6 (lower is better)
Translates to: TEAMSNDSYKFI*CSGRGSNVDDR
Trigger: TCTATCATCAACATTACTCCCTCTACCGGAACAGCAAATGAACTTATAACTATCATTGGACATGGCTTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CTGGTACTTTGCTGTACAAAGACTGCCAGATTATATTaGAGAATGTTGCCATGTTCAATACCATCTTCTATG +
Preference number: 6 (lower is better)
Translates to: LVLCCTKTARLY*RMLPCSIPSSM
Trigger: CATAGAAGATGGTATTGAACATGGCAACATTCTGCAATATAATCTGGCAGTCTTTGTACAGCAAAGTACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CCA 72 bp CAAATCCAGCGACTACATTATTTTGTAAGACTGTATTaGTCCCTCTGTTTATCTCAATTGCTGCATGCCAAA +
Preference number: 6 (lower is better)
Translates to: QIQRLHYFVRLY*SLCLSQLLHAK
Trigger: TTTGGCATGCAGCAATTGAGATAAACAGAGGGACCAATACAGTCTTACAAAATAATGTAGTCGCTGGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TTTATGCTGCCATATTTAGGTATAACTTCTGTCACTTaGGGAATTGTCTCAGAGCTACCTTTGTGGGAATCT +
Preference number: 6 (lower is better)
Translates to: FMLPYLGITSVT*GIVSELPLWES
Trigger: AGATTCCCACAAAGGTAGCTCTGAGACAATTCCCAAAGTGACAGAAGTTATACCTAAATATGGCAGCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp TTGTTGGTAATTCTGAATACTGTCCCTGTTGAATGGAGAGTACATTaGATGACATTTTCTGATGATGATGTAATGTCACATGGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LLVILNTVPVEWRVH*MTFSDDDVMSHGKE
Trigger: CTCCTTCCCATGTGACATTACATCATCATCAGAAAATGTCATCAAATGTACTCTCCATTCAACAGGGACAGTATTCAGAATTACCAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp CTGGTACTTTGCTGTACAAAGACTGCCAGATTATATTGCAGAATGTaGCCATGTTCAATACCATCTTCTATGAAAAATGCTCCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: LVLCCTKTARLYCRM*PCSIPSSMKNAPPF
Trigger: AAAAGGAGGAGCATTTTTCATAGAAGATGGTATTGAACATGGCAACATTCTGCAATATAATCTGGCAGTCTTTGTACAGCAAAGTACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TACTTCATAACCAAGCAGATCAAAGTCTCCTCTAGTTaGTACAAAGGTTATTGTGTAGATATAGCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: YFITKQIKVSSS*YKGYCVDIALE
Trigger: CTCCAGAGCTATATCTACACAATAACCTTTGTATCAACTAGAGGAGACTTTGATCTGCTTGGTTATGAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS TCA 72 bp TTTGAGAAATGGAGTATCTTCCATGGCATATGTAAATaGCAAAGGTGGGTAGATGATCGCATTGACACTAAT +
Preference number: 6 (lower is better)
Translates to: FEKWSIFHGICK*QRWVDDRIDTN
Trigger: ATTAGTGTCAATGCGATCATCTACCCACCTTTGTCATTTACATATGCCATGGAAGATACTCCATTTCTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp CTGGCAGTGCTTTCTTCCAACATACACCGTATTTTGTaGGAGTTCATTTCCAAAGTTATAACCTTTAATTGT +
Preference number: 6 (lower is better)
Translates to: LAVLSSNIHRIL*EFISKVITFNC
Trigger: ACAATTAAAGGTTATAACTTTGGAAATGAACTCGCACAAAATACGGTGTATGTTGGAAGAAAGCACTGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GTCTCCATTCTTACTAGAATTCCAATTCAATGGGTTTaGGGAGCCATTCCTCATATCAACAACATTAAACAT +
Preference number: 6 (lower is better)
Translates to: VSILTRIPIQWV*GAIPHINNIKH
Trigger: ATGTTTAATGTTGTTGATATGAGGAATGGCTCCGCAAACCCATTGAATTGGAATTCTAGTAAGAATGGAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp CAGTTTAATGTAAACGTCTCCAAATTGGGTTTTCCTTaGGTTTGTTCTGTGATACTCAGCGTGACATTACTT +
Preference number: 6 (lower is better)
Translates to: QFNVNVSKLGFP*VCSVILSVTLL
Trigger: AAGTAATGTCACGCTGAGTATCACAGAACAAACCAAAGGAAAACCCAATTTGGAGACGTTTACATTAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TCAGTTCCTGGTAGACCTCTATTAGGGATGATTCTTTaGAGAAATGGAGTATCTTCCATGGCATATGTAAAT +
Preference number: 6 (lower is better)
Translates to: SVPGRPLLGMIL*RNGVSSMAYVN
Trigger: ATTTACATATGCCATGGAAGATACTCCATTTCTCAAAAGAATCATCCCTAATAGAGGTCTACCAGGAACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp ATCACACAGAACAGTGTTGTAGAGTTAGATCTTAGTTaGTCAACTGCACATTCAGAGTTACAGACCAATATG +
Preference number: 6 (lower is better)
Translates to: ITQNSVVELDLS*STAHSELQTNM
Trigger: CATATTGGTCTGTAACTCTGAATGTGCAGTTGACAAACTAAGATCTAACTCTACAACACTGTTCTGTGTGAT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp ATAAATATAGAAATCTCTTCCAACACTGTCCCAAAACGTTCTCCTTaGATGAGGACATTTCCATATCCTTGGATTGAGTTTGGGAAGATT +
Preference number: 6 (lower is better)
Translates to: INIEISSNTVPKRSP*MRTFPYPWIEFGKI
Trigger: AATCTTCCCAAACTCAATCCAAGGATATGGAAATGTCCTCATCAAAGGAGAACGTTTTGGGACAGTGTTGGAAGAGATTTCTATATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 90 bp ATTTCAACTTCAGTTCCTGGTAGACCTCTATTAGGGATGATTCTTTaGAGAAATGGAGTATCTTCCATGGCATATGTAAATGACAAAGGT +
Preference number: 6 (lower is better)
Translates to: ISTSVPGRPLLGMIL*RNGVSSMAYVNDKG
Trigger: ACCTTTGTCATTTACATATGCCATGGAAGATACTCCATTTCTCAAAAGAATCATCCCTAATAGAGGTCTACCAGGAACTGAAGTTGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp TTGATGACTTGTTCTTCATTTAGTGCATCTCCTGTCTaGTGTTCAGTAAAGACATTTTTATACTGGTACAGT +
Preference number: 6 (lower is better)
Translates to: LMTCSSFSASPV*CSVKTFLYWYS
Trigger: ACTGTACCAGTATAAAAATGTCTTTACTGAACAGCAGACAGGAGATGCACTAAATGAAGAACAAGTCATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS CAA 72 bp TGCTGTACAAAGACTGCCAGATTATATTGCAGAATGTaGCCATGTTCAATACCATCTTCTATGAAAAATGCT +
Preference number: 6 (lower is better)
Translates to: CCTKTARLYCRM*PCSIPSSMKNA
Trigger: AGCATTTTTCATAGAAGATGGTATTGAACATGGCAACATTCTGCAATATAATCTGGCAGTCTTTGTACAGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp AAATATCAACTGTACCCTCAATTCTTTTTGATGTTCTaGAGGTTATCCTATTCAAATCTCCTTCGATCACAT +
Preference number: 6 (lower is better)
Translates to: KYQLYPQFFLMF*RLSYSNLLRSH
Trigger: ATGTGATCGAAGGAGATTTGAATAGGATAACCTGCAGAACATCAAAAAGAATTGAGGGTACAGTTGATATTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2
CDS GCA 72 bp GTGTCAATGAGTTGGACATTCTTCACATGGATTGGATaGTGTAAGTCTTCATTTAAAGGATTAGTAATGAAT +
Preference number: 6 (lower is better)
Translates to: VSMSWTFFTWIG*CKSSFKGLVMN
Trigger: ATTCATTACTAATCCTTTAAATGAAGACTTACAGCATCCAATCCATGTGAAGAATGTCCAACTCATTGACAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038336.12
ENSMUST00000166957.2
ENSMUST00000209244.2