RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKDREJ (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052496

Ensembl transcript IDs: ENSMUST00000064370.6

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTaGCACTCTTCCCCACTGCTGCAAGCTCCCACAAAAGGAGCTCTG +
Preference number: 1 (lower is better)
Translates to: PGQLFPLKLGLKVSG*HSSPLLQAPTKGAL
Trigger: CAGAGCTCCTTTTGTGGGAGCTTGCAGCAGTGGGGAAGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR CCA 90 bp ACTCTTCCCCACTGCTGCAAGCTCCCACAAAAGGAGCTCTGCCTCTaGACCAGGAGTCGCAGAATCCCATCCAGAGAGAGTCCCACCTTG +
Preference number: 1 (lower is better)
Translates to: TLPHCCKLPQKELCL*TRSRRIPSRESPTL
Trigger: CAAGGTGGGACTCTCTCTGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCTTGCAGCAGTGGGGAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR GCA 90 bp GTGGGACAGGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTaGATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGG +
Preference number: 1 (lower is better)
Translates to: VGQDASGPCPLLSRL*ILKLLKQALELPHR
Trigger: CCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCCTGTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR TCA 90 bp ATCCCATCCAGAGAGAGTCCCACCTTGCCATCCACTTCTCTCCCCTaGTTTGCCTCTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCC +
Preference number: 1 (lower is better)
Translates to: IPSRESPTLPSTSLP*FASLFMFLFPRAGP
Trigger: GGGCCCTGCTCTTGGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAGGTGGGACTCTCTCTGGATGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR GCA 90 bp ATCCAGAGAGAGTCCCACCTTGCCATCCACTTCTCTCCCCTGATTTaGCTCTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGT +
Preference number: 1 (lower is better)
Translates to: IQRESHLAIHFSPLI*LSVHVLVPKSRAQR
Trigger: ACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAGGTGGGACTCTCTCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR GCA 90 bp TCTGGACCAGGAGTCGCAGAATCCCATCCAGAGAGAGTCCCACCTTaGCATCCACTTCTCTCCCCTGATTTGCCTCTCTGTTCATGTTCT +
Preference number: 1 (lower is better)
Translates to: SGPGVAESHPERVPP*HPLLSPDLPLCSCS
Trigger: AGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAGGTGGGACTCTCTCTGGATGGGATTCTGCGACTCCTGGTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR GCA 90 bp GGACCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACGAGAGAGTCCCACCTTaGCATCCACTTCTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GPGQLFPLKLGLKVSGCHERVPP*HPLLSP
Trigger: AGGGGAGAGAAGTGGATGGCAAGGTGGGACTCTCTC...GTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR CCA 90 bp GGGACAGGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAGAGCAGGGCCCAGCGTaGGGATACTTCAGATGTGGA +
Preference number: 2 (lower is better)
Translates to: GTGRFRSLSPALSSLHSQEQGPA*GYFRCG
Trigger: TCCACATCTGAAGTATCCCCACGCTGGGCCCTGCTC...TTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR TCA 90 bp CAGGAGGACTTGAAGAGACGCTTCCCAGGCATGGTCTGCAGAGGAGACTTCCAGCTGTGGCTTAATCCATaGTGGGACCTGGCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: QEDLKRRFPGMVCRGDFQLWLNP*WDLASS
Trigger: AGAGCTGGCCAGGTCCCATCATGGATTAAGCCACAG...CTGGAAGTCTCCTCTGCAGACCATGCCTGGGAAGCGTCTCTTCAAGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR GCA 90 bp AGACTTCCAGGGAGGCTGACCAGTCTGTTTCTGTTTAGAGGCTGCTGGGCTGTGCCACAAAAGGAGCTCTaGCTCTGGACCAGGAGTCGC +
Preference number: 2 (lower is better)
Translates to: RLPGRLTSLFLFRGCWAVPQKEL*LWTRSR
Trigger: GCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGG...CACAGCCCAGCAGCCTCTAAACAGAAACAGACTGGTCAGCCTCCCTGGAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR CAA 90 bp CATCCAGAGAGAGTCCCACCTTGCCATCCACTTCTCTCCCCTGATTaGCCTCTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCG +
Preference number: 2 (lower is better)
Translates to: HPERVPPCHPLLSPD*PLCSCSCSQEQGPA
Trigger: CGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAGGTGGGACTCTCTCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR TCA 90 bp TACGCCCTGAGGGAGTTAAAGTGGGACAGGACGCTTCAGGTCCTTGTCCCCTGCTCCACTTCTCTCCCCTaGTTTGCCTCTCTGTTCATG +
Preference number: 2 (lower is better)
Translates to: YALRELKWDRTLQVLVPCSTSLP*FASLFM
Trigger: CATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGA...GCAGGGGACAAGGACCTGAAGCGTCCTGTCCCACTTTAACTCCCTCAGGGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR CCA 90 bp GGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAGGAGCTCTGCCTCTaGACCAGGAGTCGCAGAATC +
Preference number: 2 (lower is better)
Translates to: GRFRSLSPALSSLHSQTLKELCL*TRSRRI
Trigger: GATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTT...AAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR GCA 90 bp TACGCCCTGAGGGAGTTAAAGTGGGACAGGACGCTTCAGGTCCTTGTCCCCTGCTTCTCTCCCCTGATTTaGCTCTCTGTTCATGTTCTT +
Preference number: 2 (lower is better)
Translates to: YALRELKWDRTLQVLVPCFSPLI*LSVHVL
Trigger: AAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAA...GCAGGGGACAAGGACCTGAAGCGTCCTGTCCCACTTTAACTCCCTCAGGGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR GCA 90 bp CCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCACTCTTCCCCACTGCTaGAAGCTCCCACAAAAGGAG +
Preference number: 2 (lower is better)
Translates to: PALSSLHSQTLKASSGTPTLPHC*KLPQKE
Trigger: CTCCTTTTGTGGGAGCTTGCAGCAGTGGGGAAGAGT...GGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR CCA 90 bp CCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTAACATAAGTCATGTTTaGGACACTCTTTGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: PGQLFPLKLGLKVSGCHSNISHV*DTLCLW
Trigger: CCACAAGCAAAGAGTGTCCCAAACATGACTTATGTT...AGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR TCA 72 bp CCAGGCATGGTCTGCAGAGGAGACTTCCAGGGAGGCTaGCCAGTCTGTTTCTGTTTAGAGGCTGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: PGMVCRGDFQGG*PVCFCLEAAGL
Trigger: CAGCCCAGCAGCCTCTAAACAGAAACAGACTGGTCAGCCTCCCTGGAAGTCTCCTCTGCAGACCATGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR CCA 72 bp CACTGCTGCAAGCTCCCACAAAAGGAGCTCTGCCTCTaGACCAGGAGTCGCAGAATCCCATCCAGAGAGAGT +
Preference number: 3 (lower is better)
Translates to: HCCKLPQKELCL*TRSRRIPSRES
Trigger: ACTCTCTCTGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCTTGCAGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR CCA 72 bp AGGCTGCTGGGCTGTGGCTTAATCCATGATGGGACCTaGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: RLLGCGLIHDGT*PALSLEAGSQS
Trigger: ACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGGTCCCATCATGGATTAAGCCACAGCCCAGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR CAA 90 bp GACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAGGCCAGCTCTTTCCCTaGAAGCTGGGTCTCAAAGTG +
Preference number: 3 (lower is better)
Translates to: DASGPCPLLSRLCILKLLGQLFP*KLGLKV
Trigger: CACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCC...TAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR TCA 72 bp GCGTGGGGATACTTCAGATGTGGAGGTGAGCTTGACTaGGCCATCAGGCACTCTTTAGTCCCCTTGAGAAAC +
Preference number: 3 (lower is better)
Translates to: AWGYFRCGGELD*AIRHSLVPLRN
Trigger: GTTTCTCAAGGGGACTAAAGAGTGCCTGATGGCTCAGTCAAGCTCACCTCCACATCTGAAGTATCCCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR GCA 72 bp GAGTCCCACCTTGCCATCCACTTCTCTCCCCTGATTTaGCTCTCTGTTCATGTTCTTGTTCCCAAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: ESHLAIHFSPLI*LSVHVLVPKSR
Trigger: CCTGCTCTTGGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAGGTGGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR CAA 90 bp CCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCTGTTTGGGACACTCTTaGCTTGTGGCCCTCCTGACC +
Preference number: 3 (lower is better)
Translates to: PALSSLHSQTLKASSGTPCLGHS*LVALLT
Trigger: GGTCAGGAGGGCCACAAGCAAAGAGTGTCCCAAACA...GGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR GCA 72 bp GACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTaGATTCTCAAACTCTTAAAGCAAGCTCTGGAACTC +
Preference number: 3 (lower is better)
Translates to: DASGPCPLLSRL*ILKLLKQALEL
Trigger: GAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR-3UTR CAA 90 bp CCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCTTCTCTCCCCTGATTaGCCTCTCTGTTCATGTTCT +
Preference number: 3 (lower is better)
Translates to: PALSSLHSQTLKASSGTPLLSPD*PLCSCS
Trigger: AGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAG...GGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp GGAGGACTTGAAGAGACGCTTCCCAGGCATGGTCTGCAGAGGAGACTTCCAGGGCGGGGTCCGAAGAGTTaGCTTTCAGGAGGACGCGTG +
Preference number: 4 (lower is better)
Translates to: GGLEETLPRHGLQRRLPGRGPKS*LSGGRV
Trigger: CACGCGTCCTCCTGAAAGTCAACTCTTCGGACCCCG...CCCTGGAAGTCTCCTCTGCAGACCATGCCTGGGAAGCGTCTCTTCAAGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp ACTGCTGCAAGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAACCTGGGGACCGTGCTTaGGTTCAGTGTCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: TAASSHKRSSASGPGVAEPGDRA*VQCRTE
Trigger: CTCCGTGCGACACTGAACGCAAGCACGGTCCCCAGG...TTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCTTGCAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCAGAGAATGTGTGCCTTGGGCTaGAGCCCCTGGAGCACGTGT +
Preference number: 4 (lower is better)
Translates to: PTKGALPLDQESQNPIQRMCALG*SPWSTC
Trigger: ACACGTGCTCCAGGGGCTTCAGCCCAAGGCACACAT...TCTCTGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp AGGATCCCCTCTAGCCCTGGCCTGCAGGAGGACTTGAAGAGACGCTTCCCAGGCCGGGCTCTGTCATCTTaGAGTTCCTGCTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: RIPSSPGLQEDLKRRFPGRALSS*SSCSPF
Trigger: AAAAGGGGAGCAGGAACTTCAAGATGACAGAGCCCG...GCCTGGGAAGCGTCTCTTCAAGTCCTCCTGCAGGCCAGGGCTAGAGGGGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp AGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCAAAGCCGTGTGGCAGATaGCAGGAAGGGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSHKRSSASGPGVAESHPKPCGR*QEGQPG
Trigger: TCCAGGCTGCCCTTCCTGGCATCTGCCACACGGCTT...TGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp GGACCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACGAATCCTGCTCTGGGTaGCAGACAGCCTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: GPGQLFPLKLGLKVSGCHESCSG*QTAWLI
Trigger: GATCAACCAGGCTGTCTGCCACCCAGAGCAGGATTC...GTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp AGGATCCCCTCTAGCCCTGGCCTGCAGGAGGACTTGAAGAGACGCTTCCCAGGCGTACTGTTTTCCACGTaGTCTTCTCACCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: RIPSSPGLQEDLKRRFPGVLFST*SSHPAR
Trigger: GCGTGCTGGGTGAGAAGACCACGTGGAAAACAGTAC...GCCTGGGAAGCGTCTCTTCAAGTCCTCCTGCAGGCCAGGGCTAGAGGGGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp AAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTTCCCCACTGCTGCAAGCTCCCATGCCGTACTGTGGGTaGCAATGGATTTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KLGLKVSGCHSSPLLQAPMPYCG*QWISPA
Trigger: TGCAGGGGAAATCCATTGTCACCCACAGTACGGCAT...GGGAGCTTGCAGCAGTGGGGAAGAGTGGCAGCCGCTCACTTTGAGACCCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp GGACCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACAATGCAGGAAATGTGTaGCTTGGGCTGAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GPGQLFPLKLGLKVSGCHNAGNV*LGLKPL
Trigger: CAGGGGCTTCAGCCCAAGGCACACATTTCCTGCATT...GTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp AGGATCCCCTCTAGCCCTGGCCTGCAGGAGGACTTGAAGAGACGCTTCCCAGGCTGGTTAGGATGCCAGTaGCCACAACTTCAACCTGCT +
Preference number: 4 (lower is better)
Translates to: RIPSSPGLQEDLKRRFPGWLGCQ*PQLQPA
Trigger: AGCAGGTTGAAGTTGTGGGCACTGGCATCCTAACCA...GCCTGGGAAGCGTCTCTTCAAGTCCTCCTGCAGGCCAGGGCTAGAGGGGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCAGAGAATACAGGGGGCCGTCTaGCAGGACACGTTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: PTKGALPLDQESQNPIQRIQGAV*QDTLAL
Trigger: CAAGGCTAACGTGTCCTGCCAGACGGCCCCCTGTAT...TCTCTGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCAGAGAACTGGAGTCCCCATGTaGGGATGTCTGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PTKGALPLDQESQNPIQRTGVPM*GCLPLG
Trigger: ACCCAGAGGCAGACATCCCCACATGGGGACTCCAGT...TCTCTGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp GGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTTCCTCCTGTTCTCCCGCCTaGGGATCTGGATTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GQLFPLKLGLKVSGCHSSSCSPA*GSGFCP
Trigger: AGGACAAAATCCAGATCCTCAGGCGGGAGAACAGGA...GGAAGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp GGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTTCCTTGATCTTCACTGGCTaGATGATACAGGGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GQLFPLKLGLKVSGCHSSLIFTG*MIQGAV
Trigger: GACGGCCCCCTGTATCATGCAGCCAGTGAAGATCAA...GGAAGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp GTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATGTGCCAAGGCCAGTTCAGTaGATCCTGCTCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VHVLVPKSRAQRGDTSDVPRPVQ*ILLWVA
Trigger: TGCCACCCAGAGCAGGATTCACTGAACTGGCCTTGG...CACATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp GGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTTCCTGTCTGTTGACTGCTTaGCAGCCTTACTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: GQLFPLKLGLKVSGCHSSCLLTA*QPYSRH
Trigger: GTGTCTGGAGTAAGGCTGGCAAGCAGTCAACAGACA...GGAAGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATGGTCCTCAGAGCAGTaGTCTTGCTCCCCGGAACCT +
Preference number: 4 (lower is better)
Translates to: LCSCSCSQEQGPAWGYFRWSSEQ*SCSPEP
Trigger: AGGTTCCGGGGAGCAAGACCACTGCTCTGAGGACCA...TCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTGGTTCTTACAGTACTTaGGCTTGTAGCTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PGQLFPLKLGLKVSGCHSGSYST*ACSSWC
Trigger: GCACCAGGAGCTACAAGCCCAAGTACTGTAAGAACC...AGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp AAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTTCCCCACTGCTGCAAGCTCCCTGCTACACATCAGACTaGTGTCTGGATTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: KLGLKVSGCHSSPLLQAPCYTSD*CLDSEW
Trigger: CCACTCTGAATCCAGACACCAGTCTGATGTGTAGCA...GGGAGCTTGCAGCAGTGGGGAAGAGTGGCAGCCGCTCACTTTGAGACCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp GGACCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACAAAGCTGGACCATTTTaGTGGCCAGGAAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: GPGQLFPLKLGLKVSGCHKAGPF*WPGSTS
Trigger: GGAAGTACTTCCTGGCCACCAAAATGGTCCAGCTTT...GTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp AGACTTCCAGGGAGGCTGACCAGTCTGTTTCTGTTTAGAGGCTGCTGGGCTGTGACACGGCAGCTCTCCTaGGGAGAGCCTTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: RLPGRLTSLFLFRGCWAVTRQLS*GEPSFH
Trigger: ATGAAATGAAGGCTCTCCCCAGGAGAGCTGCCGTGT...CACAGCCCAGCAGCCTCTAAACAGAAACAGACTGGTCAGCCTCCCTGGAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CTTGCCATCCACTTCTCTCCCCTGATTTGCCTCTCTGTTCATGTTCTTGTTCCCGCGGGCCTCCTTGACTaGACAGGTTGGGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: LAIHFSPLICLSVHVLVPAGLLD*TGWVKQ
Trigger: CTGTTTGACCCAACCTGTTCAGTCAAGGAGGCCCGC...GGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp AGACTTCCAGGGAGGCTGACCAGTCTGTTTCTGTTTAGAGGCTGCTGGGCTGTGGGATGGCTTAAACAGTaGACATCACTGGTACCCTCC +
Preference number: 4 (lower is better)
Translates to: RLPGRLTSLFLFRGCWAVGWLKQ*TSLVPS
Trigger: GGAGGGTACCAGTGATGTTCACTGTTTAAGCCATCC...CACAGCCCAGCAGCCTCTAAACAGAAACAGACTGGTCAGCCTCCCTGGAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp ATCCAGAGAGAGTCCCACCTTGCCATCCACTTCTCTCCCCTGATTTGCCTCTCTGCTCATCCGGGTTGGTaGCAGAAAACGTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: IQRESHLAIHFSPLICLSAHPGW*QKTLHP
Trigger: TGGATGCAACGTTTTCTGTCACCAACCCGGATGAGC...AGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAGGTGGGACTCTCTCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTGATGCCTATCAGCATTaGCCTGATAATGTGCATGTG +
Preference number: 4 (lower is better)
Translates to: PGQLFPLKLGLKVSGCHSDAYQH*PDNVHV
Trigger: CACATGCACATTATCAGGTCAATGCTGATAGGCATC...AGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCGGACAGACCTTCCTCTaGCATCAGGGGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PALSSLHSQTLKASSGTPGQTFL*HQGVLL
Trigger: CAGAAGCACCCCCTGATGTCAGAGGAAGGTCTGTCC...GGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CCACTGCTGCAAGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGTTTCTCATGCTTCTGTaGGGTTTCAAAGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PLLQAPTKGALPLDQESQFLMLL*GFKGFL
Trigger: AAGGAAGCCTTTGAAACCTCACAGAAGCATGAGAAA...CTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCTTGCAGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp GGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTGGCGCAGTGAGAAAATaGGCAACAGGAGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GRFRSLSPALSSLHSQTLGAVRK*ATGEGS
Trigger: TGACCCTTCTCCTGTTGCTCATTTTCTCACTGCGCC...AAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CCACTGCTGCAAGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAGAACCTGGAATATCTaGGTGTCTTCAGTATGGTCA +
Preference number: 4 (lower is better)
Translates to: PLLQAPTKGALPLDQESQRTWNI*VSSVWS
Trigger: TGACCATACTGAAGACACTCAGATATTCCAGGTTCT...CTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCTTGCAGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp CCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCTTAGACACTGCCACCTaGGGCAAGAGCACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PALSSLHSQTLKASSGTPLDTAT*GKSTGR
Trigger: CCGACCTGTGCTCTTGCCGCAGGTGGCAGTGTCTAA...GGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp GGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTCTCCTGGTGATTGCTTaGCCTGCCCAGTCAAACATC +
Preference number: 4 (lower is better)
Translates to: GRFRSLSPALSSLHSQTLLLVIA*PAQSNI
Trigger: GATGTTTGACTGGGCAGGGCAAGCAATCACCAGGAG...AAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp AGGATCCCCTCTAGCCCTGGCCTGCAGGAGGACTTGAAGAGACGCTTCCCAGGCAAAGTCGCAGGGTTTTaGGTAAGGTTACTAATGATC +
Preference number: 4 (lower is better)
Translates to: RIPSSPGLQEDLKRRFPGKVAGF*VRLLMI
Trigger: GATCATTAGTAACCTTACCCAAAACCCTGCGACTTT...GCCTGGGAAGCGTCTCTTCAAGTCCTCCTGCAGGCCAGGGCTAGAGGGGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp GGGACAGGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAACTGGAGCCTGTTGAATaGTTTGGGGACAATTTCCGT +
Preference number: 4 (lower is better)
Translates to: GTGRFRSLSPALSSLHSQLEPVE*FGDNFR
Trigger: ACGGAAATTGTCCCCAAACCATTCAACAGGCTCCAG...TTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp GGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTATCAGGGGGTGCTTCTaGGGTGCCACTTTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: GRFRSLSPALSSLHSQTLIRGCF*GATLSR
Trigger: TCTAGACAAAGTGGCACCCCAGAAGCACCCCCTGAT...AAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp TACGCCCTGAGGGAGTTAAAGTGGGACAGGACGCTTCAGGTCCTTGTCCCCTGCACGATATACCGGAAGTaGCAAACACCAAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: YALRELKWDRTLQVLVPCTIYRK*QTPKTR
Trigger: CCTGGTTTTTGGTGTTTGCCACTTCCGGTATATCGT...GCAGGGGACAAGGACCTGAAGCGTCCTGTCCCACTTTAACTCCCTCAGGGCGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCTGGGCTTGTAGCTCCTaGTGCCTGACCTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LCILKLLKQALELPHRIPWACSS*CLTSGE
Trigger: TTCTCCTGAGGTCAGGCACCAGGAGCTACAAGCCCA...GGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCACCACCAAAGCCGTGTaGCAGATGCCAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PALSSLHSQTLKASSGTPTTKAV*QMPGRA
Trigger: TGCCCTTCCTGGCATCTGCCACACGGCTTTGGTGGT...GGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGAACAACTTCAACCTGCTaGAGGTGCTTGTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LCSCSCSQEQGPAWGYFRTTSTC*RCLCLC
Trigger: GCACAGACACAAGCACCTTCAGCAGGTTGAAGTTGT...TCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp TCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATGTCGTTGTGGCGCAGTaGGAAAATGAGCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: SVHVLVPKSRAQRGDTSDVVVAQ*ENEQQE
Trigger: CTCCTGTTGCTCATTTTCTCACTGCGCCACAACGAC...ATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp GTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATGTGACGAGGTTTTTCTGTTaGAGTCAGCCAGCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VHVLVPKSRAQRGDTSDVTRFFC*SQPARR
Trigger: CCTTCTCGCTGGCTGACTTCAACAGAAAAACCTCGT...CACATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTAGATCATCACCAACATaGAAGACGACAGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: PGQLFPLKLGLKVSGCHSRSSPT*KTTETG
Trigger: TCCTGTTTCTGTCGTCTTTCATGTTGGTGATGATCT...AGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp GGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTTCCTATTCATGCCATTTGTaGAATCGCTCTTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GQLFPLKLGLKVSGCHSSYSCHL*NRSFQD
Trigger: GTCCTGGAAAGAGCGATTGCACAAATGGCATGAATA...GGAAGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp GGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTTCCGTGTCTGCTTTCTCATaGTTCTGTGAGGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: GQLFPLKLGLKVSGCHSSVSAFS*FCEVSK
Trigger: CTTTGAAACCTCACAGAAGCATGAGAAAGCAGACAC...GGAAGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp GACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAACGTTGCATCCAAAGTaGTGTCCACAGAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: DASGPCPLLSRLCILKLLTLHPK*CPQRAT
Trigger: GGTGGCTCTCTGTGGACACCACTTTGGATGCAACGT...TAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp GGACCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTTCTTATTGGACATTTaGGTGTCTGCTTTCTCATGC +
Preference number: 4 (lower is better)
Translates to: GPGQLFPLKLGLKVSGCHFLLDI*VSAFSC
Trigger: GCATGAGAAAGCAGACACCCAAATGTCCAATAAGAA...GTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGAGCTGGACCATTTTGGTaGCCAGGAAGTACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LCSCSCSQEQGPAWGYFRAGPFW*PGSTSR
Trigger: TCTGGAAGTACTTCCTGGCCACCAAAATGGTCCAGC...TCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp ATCCAGAGAGAGTCCCACCTTGCCATCCACTTCTCTCCCCTGATTTGCCTCTCTCTGCAGCCTGATTTCTaGGTAATGGTACTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: IQRESHLAIHFSPLICLSLQPDF*VMVLAG
Trigger: TCCAGCAAGTACCATTACTCAGAAATCAGGCTGCAG...AGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAGGTGGGACTCTCTCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp AGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCATCATTTTCTTCCCGTTaGTATTTCTGGCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: SSHKRSSASGPGVAESHPSFSSR*YFWPSV
Trigger: GACTGAAGGCCAGAAATATCAACGGGAAGAAAATGA...TGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGAGCATATTTGGGGATGTaGAGGGAGAAACCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: LCSCSCSQEQGPAWGYFRAYLGM*REKPLD
Trigger: GTCTAAGGGTTTCTCCCTCCACATCCCCAAATATGC...TCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp TGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAAAGGGAGAAAGAAGGCTaGTGTTATCGGCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CPLLSRLCILKLLKQALEREKEG*CYRLCP
Trigger: GGGGCAGAGCCGATAACACCAGCCTTCTTTCTCCCT...TTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp AGACTTCCAGGGAGGCTGACCAGTCTGTTTCTGTTTAGAGGCTGCTGGGCTGTGTGCTTGTGTCTGTGCTaGTATTCTTGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RLPGRLTSLFLFRGCWAVCLCLC*YSCRSW
Trigger: CCAAGACCTACAAGAATACCAGCACAGACACAAGCA...CACAGCCCAGCAGCCTCTAAACAGAAACAGACTGGTCAGCCTCCCTGGAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp AGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCACCTTCACTGGCTTCTTaGTTATTGTTACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SSHKRSSASGPGVAESHPPSLAS*LLLLLF
Trigger: GAACAGCAGTAACAATAACCAAGAAGCCAGTGAAGG...TGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp GACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAGCCACTCTATTGACTTaGCATAGCCGTAAGTCACGC +
Preference number: 4 (lower is better)
Translates to: DASGPCPLLSRLCILKLLATLLT*HSRKSR
Trigger: GCGTGACTTACGGCTATGCCAAGTCAATAGAGTGGC...TAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CCACTTCTCTCCCCTGATTTGCCTCTCTGTTCATGTTCTTGTTCCCAAGAGCAGTCCTCAGTGATGGGCTaGTACATGCTCAAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PLLSPDLPLCSCSCSQEQSSVMG*YMLKLR
Trigger: CCGAAGCTTGAGCATGTACCAGCCCATCACTGAGGA...CTGCTCTTGGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR CAA 72 bp AGAGTCCCACCTTGCCATCCACTTCTCTCCCCTGATTaGCCTCTCTGTTCATGTTCTTGTTCCCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RVPPCHPLLSPD*PLCSCSCSQEQ
Trigger: CTGCTCTTGGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAGGTGGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCTCAGATTGGTGGGCGTaGGCTGACAGCCTTCATATA +
Preference number: 4 (lower is better)
Translates to: PALSSLHSQTLKASSGTPSDWWA*ADSLHI
Trigger: TATATGAAGGCTGTCAGCTCACGCCCACCAATCTGA...GGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp GTCCCCTTGAGAAACATAAGTCATGTTTGGGACACTCTTTGCTTGTGGCCCTCCACGAGGAACACAGACTaGCAGAAGGAACAGAACGAC +
Preference number: 4 (lower is better)
Translates to: VPLRNISHVWDTLCLWPSTRNTD*QKEQND
Trigger: GTCGTTCTGTTCCTTCTGTCAGTCTGTGTTCCTCGT...GGAGGGCCACAAGCAAAGAGTGTCCCAAACATGACTTATGTTTCTCAAGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp CTTGCCATCCACTTCTCTCCCCTGATTTGCCTCTCTGTTCATGTTCTTGTTCCCATTCCTCCTGGTGATTaGTTGCCCTGCCCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LAIHFSPLICLSVHVLVPIPPGD*LPCPVK
Trigger: TTTGACTGGGCAGGGCAAGCAATCACCAGGAGGAAT...GGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp CTTGCCATCCACTTCTCTCCCCTGATTTGCCTCTCTGTTCATGTTCTTGTTCCCCAGGACAAAACGCGATaGCTGCAGGACCATGGATAT +
Preference number: 4 (lower is better)
Translates to: LAIHFSPLICLSVHVLVPQDKTR*LQDHGY
Trigger: ATATCCATGGTCCTGCAGGCATCGCGTTTTGTCCTG...GGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp CCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTATTGACCTGATAATGTaGATGTGTCTGGACTCAATT +
Preference number: 4 (lower is better)
Translates to: PGQLFPLKLGLKVSGCHSIDLIM*MCLDSI
Trigger: AATTGAGTCCAGACACATGCACATTATCAGGTCAAT...AGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp GGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTACAGACTCAGTAGTATaGGGTTGGGAAGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GRFRSLSPALSSLHSQTLTDSVV*GWEEKA
Trigger: AGCTTTCTCTTCCCAACCGCATACTACTGAGTCTGT...AAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp TCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCGCTTGTAGCTCCTGGTaGCTGACCTCAGGAGAATAT +
Preference number: 4 (lower is better)
Translates to: SLHSQTLKASSGTPPQDPACSSW*LTSGEY
Trigger: ATATTCTCCTGAGGTCAGGCACCAGGAGCTACAAGC...GGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp TGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAAACCCGAGAAACGGCATaGAAGGGAATGAAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: CPLLSRLCILKLLKQALETRETA*KGMKAS
Trigger: CGAAGCCTTCATTCCCTTCCATGCCGTTTCTCGGGT...TTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
3UTR CAA 72 bp GCACTCTTTAGTCCCCTTGAGAAACATAAGTCATGTTaGGGACACTCTTTGCTTGTGGCCCTCCTGACCGTC +
Preference number: 4 (lower is better)
Translates to: ALFSPLEKHKSC*GHSLLVALLTV
Trigger: GACGGTCAGGAGGGCCACAAGCAAAGAGTGTCCCAAACATGACTTATGTTTCTCAAGGGGACTAAAGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCGCAGTTTGGACAGAGTaGATCATTTCTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LCILKLLKQALELPHRIPAVWTE*IISEGL
Trigger: AAGGCCTTCAGAAATGATTCACTCTGTCCAAACTGC...GGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CAGGAGGACTTGAAGAGACGCTTCCCAGGCATGGTCTGCAGAGGAGACTTCCAGTGGATATGTTATACTTaGATGAAAATCTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: QEDLKRRFPGMVCRGDFQWICYT*MKICAE
Trigger: CTCAGCGCAGATTTTCATTCAAGTATAACATATCCA...CTGGAAGTCTCCTCTGCAGACCATGCCTGGGAAGCGTCTCTTCAAGTCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp GTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATGTGCCCTCACATCAATCATaGAGAAGTCTGTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: VHVLVPKSRAQRGDTSDVPSHQS*RSLSFS
Trigger: TGAAAAGGACAGACTTCTTCATGATTGATGTGAGGG...CACATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp AGACTTCCAGGGAGGCTGACCAGTCTGTTTCTGTTTAGAGGCTGCTGGGCTGTGGACAGAATCACTGCCTaGAACAAGTTGATGAAGATA +
Preference number: 4 (lower is better)
Translates to: RLPGRLTSLFLFRGCWAVDRITA*NKLMKI
Trigger: TATCTTCATCAACTTGTTTCAGGCAGTGATTCTGTC...CACAGCCCAGCAGCCTCTAAACAGAAACAGACTGGTCAGCCTCCCTGGAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp CCACTTCTCTCCCCTGATTTGCCTCTCTGTTCATGTTCTTGTTCCCAAGAGCAGACGCAGGTACTTTGTTaGCAATCACTCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: PLLSPDLPLCSCSCSQEQTQVLC*QSLWIP
Trigger: TGGGATCCAGAGTGATTGGCAACAAAGTACCTGCGT...CTGCTCTTGGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp TGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAATCTATCACATCCCTGTaGAAGGCCCAGAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CPLLSRLCILKLLKQALESITSL*KAQKAR
Trigger: TCTGGCTTTCTGGGCCTTGCACAGGGATGTGATAGA...TTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp CGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCTGTCTTCTGGGTCAATaGCGTACTGTGGGTGACAAT +
Preference number: 4 (lower is better)
Translates to: RLCILKLLKQALELPHRICLLGQ*RTVGDN
Trigger: ATTGTCACCCACAGTACGGCATTGACCCAGAAGACA...GATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp TCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTAAGGCAGGGCATATTTaGGGATGTGGAGGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SPALSSLHSQTLKASSGTKAGHI*GCGGRN
Trigger: GTTTCTCCCTCCACATCCCCAAATATGCCCTGCCTT...AGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCGAGTTTTTGGTGGAATaGTTAGTACAGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LCILKLLKQALELPHRIPEFLVE*LVQSPL
Trigger: CAGTGGGCTCTGTACTAACCATTCCACCAAAAACTC...GGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp AGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCAAGGCAAAAGCTTTTATaGACAAATAAGGTCCATTCC +
Preference number: 4 (lower is better)
Translates to: SSHKRSSASGPGVAESHPRQKLL*TNKVHS
Trigger: GGAATGGACCTTATTTGTCCATAAAAGCTTTTGCCT...TGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp TCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATAGTAATGGTACTTGCTaGACCACGAGAGGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SVHVLVPKSRAQRGDTSDSNGTC*TTRGSY
Trigger: GTAAGAACCTCTCGTGGTCCAGCAAGTACCATTACT...ATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp TGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCTCTTCAGGAGGAAAGTATTaGTACTTCCTCGGTATAGGG +
Preference number: 4 (lower is better)
Translates to: CILKLLKQALELPHRIPSSGGKY*YFLGIG
Trigger: CCCTATACCGAGGAAGTATCAATACTTTCCTCCTGA...AGAGGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCATCTGGGTCTTCTTTTaGACAGACTCAGTAGTATGC +
Preference number: 4 (lower is better)
Translates to: LCILKLLKQALELPHRIPIWVFF*TDSVVC
Trigger: GCATACTACTGAGTCTGTTCAAAAGAAGACCCAGAT...GGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp GTCCCCTTGAGAAACATAAGTCATGTTTGGGACACTCTTTGCTTGTGGCCCTCCCACACTCGGATGGAATaGATATCCCCCAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: VPLRNISHVWDTLCLWPSHTRME*ISPKSF
Trigger: AAATGACTTGGGGGATATCCATTCCATCCGAGTGTG...GGAGGGCCACAAGCAAAGAGTGTCCCAAACATGACTTATGTTTCTCAAGGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CCACTTCTCTCCCCTGATTTGCCTCTCTGTTCATGTTCTTGTTCCCAAGAGCAGGAGGGACACCTTCACTaGCTTCTTGGTTATTGTTAC +
Preference number: 4 (lower is better)
Translates to: PLLSPDLPLCSCSCSQEQEGHLH*LLGYCY
Trigger: GTAACAATAACCAAGAAGCCAGTGAAGGTGTCCCTC...CTGCTCTTGGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp GACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTACCTTACTCCAGACACTaGAATAGTGTTGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: DASGPCPLLSRLCILKLLPYSRH*NSVVCL
Trigger: AAGACACACAACACTATTCCAGTGTCTGGAGTAAGG...TAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp TCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTAAAGAGCCACTCTATTaGCTTGGCATAGCCGTAAGT +
Preference number: 4 (lower is better)
Translates to: SPALSSLHSQTLKASSGTKEPLY*LGIAVS
Trigger: ACTTACGGCTATGCCAAGTCAATAGAGTGGCTCTTT...AGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp TCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATAATGCAGTTCTGTTTTaGTTCTGTACCACCATTCTG +
Preference number: 4 (lower is better)
Translates to: SVHVLVPKSRAQRGDTSDNAVLF*FCTTIL
Trigger: CAGAATGGTGGTACAGAAGCAAAACAGAACTGCATT...ATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp AGACTTCCAGGGAGGCTGACCAGTCTGTTTCTGTTTAGAGGCTGCTGGGCTGTGCCAGAAAGCCAGAATTaGATACAAGATCATAATGAA +
Preference number: 4 (lower is better)
Translates to: RLPGRLTSLFLFRGCWAVPESQN*IQDHNE
Trigger: TTCATTATGATCTTGTATGCAATTCTGGCTTTCTGG...CACAGCCCAGCAGCCTCTAAACAGAAACAGACTGGTCAGCCTCCCTGGAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp TGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCTCTACCTCAGGAGAATATTaGATGGTTGTACGAGGAACA +
Preference number: 4 (lower is better)
Translates to: CILKLLKQALELPHRIPSTSGEY*MVVRGT
Trigger: TGTTCCTCGTACAACCATGCAATATTCTCCTGAGGT...AGAGGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp CGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCGGCAGACAGAATCACTaGCTGAAACAAGTTGATGAA +
Preference number: 4 (lower is better)
Translates to: RLCILKLLKQALELPHRIGRQNH*LKQVDE
Trigger: TTCATCAACTTGTTTCAGGCAGTGATTCTGTCTGCC...GATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGAAAACATCTGCTGTCCTaGAAAGAAGTAGAACACATA +
Preference number: 4 (lower is better)
Translates to: LCSCSCSQEQGPAWGYFRKHLLS*KEVEHI
Trigger: TATGTGTTCTACTTCTTTCCAGGACAGCAGATGTTT...TCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp TCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATTGGCGTGAATCATATTaGTGTAATTCCATTCATGCT +
Preference number: 4 (lower is better)
Translates to: SVHVLVPKSRAQRGDTSDWRESY*CNSIHA
Trigger: AGCATGAATGGAATTACAGCAATATGATTCACGCCA...ATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp TGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACAGGAGAATATTGCATaGTTGTACGAGGAACACAGA +
Preference number: 4 (lower is better)
Translates to: CPLLSRLCILKLLKQALEQENIA*LYEEHR
Trigger: TCTGTGTTCCTCGTACAACCATGCAATATTCTCCTG...TTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp TGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAATCTGTACAAACTTCTTaGCCAACAGACACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: CPLLSRLCILKLLKQALESVQTS*PTDTSC
Trigger: ACAAGACGTGTCTGTTGGCCAAGAAGTTTGTACAGA...TTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR GCA 90 bp CTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCTTCATTTCATATTCATaGCATTTGTGCAATCGCTCT +
Preference number: 4 (lower is better)
Translates to: LCILKLLKQALELPHRIPFISYS*HLCNRS
Trigger: AGAGCGATTGCACAAATGGCATGAATATGAAATGAA...GGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR TCA 90 bp CTCTTTAGTCCCCTTGAGAAACATAAGTCATGTTTGGGACACTCTTTGCTTGTGGCTTGCAAAGTCACTTaGGAAAATGTCCCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: LFSPLEKHKSCLGHSLLVACKVT*ENVPKE
Trigger: CTCCTTAGGGACATTTTCTCAAGTGACTTTGCAAGC...CACAAGCAAAGAGTGTCCCAAACATGACTTATGTTTCTCAAGGGGACTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CTCTTTAGTCCCCTTGAGAAACATAAGTCATGTTTGGGACACTCTTTGCTTGTGTGTTGCCAATCACTCTaGATCCCATACATGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LFSPLEKHKSCLGHSLLVCCQSL*IPYMSK
Trigger: TTTGGACATGTATGGGATCCAGAGTGATTGGCAACA...CACAAGCAAAGAGTGTCCCAAACATGACTTATGTTTCTCAAGGGGACTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CCA 90 bp CTCTTTAGTCCCCTTGAGAAACATAAGTCATGTTTGGGACACTCTTTGCTTGTGAAGTCAGAGGCTTTCTaGGTTAATTTGGTAATCACC +
Preference number: 4 (lower is better)
Translates to: LFSPLEKHKSCLGHSLLVKSEAF*VNLVIT
Trigger: GGTGATTACCAAATTAACCCAGAAAGCCTCTGACTT...CACAAGCAAAGAGTGTCCCAAACATGACTTATGTTTCTCAAGGGGACTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp GGCTGCGGGGTCCGAAGAGTTGACTTTCAGGAGGACGCGTGCAGCTaGGCCCGAGGGACACCTACGGGGCGGCGTAGGGCTGGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: GCGVRRVDFQEDACS*ARGTPTGRRRAGVA
Trigger: CGCCACGCCAGCCCTACGCCGCCCCGTAGGTGTCCCTCGGGCGCAGCTGCACGCGTCCTCCTGAAAGTCAACTCTTCGGACCCCGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp CATGATACAGGGGGCCGTCTGGCAGGACACGTTAGCCTTGGCGGCTaGGGGGTCCGAAGAGTTGACTTTCAGGAGGACGCGTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HDTGGRLAGHVSLGG*GVRRVDFQEDACSC
Trigger: GCAGCTGCACGCGTCCTCCTGAAAGTCAACTCTTCGGACCCCGCAGCCGCCAAGGCTAACGTGTCCTGCCAGACGGCCCCCTGTATCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp TCCTTCCTGTTGATCTTCACTGGCTGCATGATACAGGGGGCCGTCTaGCAGGACACGTTAGCCTTGGCGGCTGCGGGGTCCGAAGAGTTG +
Preference number: 5 (lower is better)
Translates to: SFLLIFTGCMIQGAV*QDTLALAAAGSEEL
Trigger: CAACTCTTCGGACCCCGCAGCCGCCAAGGCTAACGTGTCCTGCCAGACGGCCCCCTGTATCATGCAGCCAGTGAAGATCAACAGGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp AGGATAAGGGGAGCGTTCTGGTCCTTCCTGTTGATCTTCACTGGCTaGATGATACAGGGGGCCGTCTGGCAGGACACGTTAGCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: RIRGAFWSFLLIFTG*MIQGAVWQDTLALA
Trigger: CGCCAAGGCTAACGTGTCCTGCCAGACGGCCCCCTGTATCATGCAGCCAGTGAAGATCAACAGGAAGGACCAGAACGCTCCCCTTATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp GCTCAGGATAAGGGGAGCGTTCTGGTCCTTCCTGTTGATCTTCACTaGCTGCATGATACAGGGGGCCGTCTGGCAGGACACGTTAGCCTT +
Preference number: 5 (lower is better)
Translates to: AQDKGSVLVLPVDLH*LHDTGGRLAGHVSL
Trigger: AAGGCTAACGTGTCCTGCCAGACGGCCCCCTGTATCATGCAGCCAGTGAAGATCAACAGGAAGGACCAGAACGCTCCCCTTATCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp TTGAGGGTGGCTTCCTCGTCTCTGCTCAGGATAAGGGGAGCGTTCTaGTCCTTCCTGTTGATCTTCACTGGCTGCATGATACAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LRVASSSLLRIRGAF*SFLLIFTGCMIQGA
Trigger: GGCCCCCTGTATCATGCAGCCAGTGAAGATCAACAGGAAGGACCAGAACGCTCCCCTTATCCTGAGCAGAGACGAGGAAGCCACCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp ACTGCTGCAAGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAACTCAGAGCAGTGGTCTaGCTCCCCGGAACCTTGTTA +
Preference number: 5 (lower is better)
Translates to: TAASSHKRSSASGPGVAELRAVV*LPGTLL
Trigger: TAACAAGGTTCCGGGGAGCAAGACCACTGCTCTGAG...TTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCTTGCAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCAGGTCTGGCCCTCACTaGCCTCACAAGCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LCILKLLKQALELPHRIPRSGPH*PHKRKA
Trigger: GGCCTTCCGCTTGTGAGGCAAGTGAGGGCCAGACCT...GGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp ACACCACCAAAGCCGTGTGGCAGATGCCAGGAAGGGCAGCCTGGATaGCCTTCTGAGCCAGGCGCACATTATAGAAGAACCTGGAATATC +
Preference number: 5 (lower is better)
Translates to: TPPKPCGRCQEGQPG*PSEPGAHYRRTWNI
Trigger: GATATTCCAGGTTCTTCTATAATGTGCGCCTGGCTCAGAAGGCCATCCAGGCTGCCCTTCCTGGCATCTGCCACACGGCTTTGGTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp GGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTTCCAGCCTCTGGAGCCTGTaGAATGGTTTGGGGACAATT +
Preference number: 5 (lower is better)
Translates to: GQLFPLKLGLKVSGCHSSSLWSL*NGLGTI
Trigger: AATTGTCCCCAAACCATTCAACAGGCTCCAGAGGCT...GGAAGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp AACAAGAAGGACCTCCTCCGGATCCTGTTCTCCCGCCTGAGGATCTaGATTTTGTCCTCAGTGATGGGCTGGTACATGCTCAAGCTTCGG +
Preference number: 5 (lower is better)
Translates to: NKKDLLRILFSRLRI*ILSSVMGWYMLKLR
Trigger: CCGAAGCTTGAGCATGTACCAGCCCATCACTGAGGACAAAATCCAGATCCTCAGGCGGGAGAACAGGATCCGGAGGAGGTCCTTCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCAGAGATTCTGGTCCTTCCTGTaGATCTTCACTGGCTGCATG +
Preference number: 5 (lower is better)
Translates to: PTKGALPLDQESQNPIQRFWSFL*IFTGCM
Trigger: CATGCAGCCAGTGAAGATCAACAGGAAGGACCAGAA...TCTCTGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp GGACCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACGTCAGGAGGAAAGTATaGATACTTCCTCGGTATAGG +
Preference number: 5 (lower is better)
Translates to: GPGQLFPLKLGLKVSGCHVRRKV*ILPRYR
Trigger: CCTATACCGAGGAAGTATCAATACTTTCCTCCTGAC...GTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTCAAAGAGCCACTCTATaGACTTGGCATAGCCGTAAG +
Preference number: 5 (lower is better)
Translates to: PGQLFPLKLGLKVSGCHSQRATL*TWHSRK
Trigger: CTTACGGCTATGCCAAGTCAATAGAGTGGCTCTTTG...AGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp GACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAGCCAACAGACACGTCTaGTTGCTAGGTCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: DASGPCPLLSRLCILKLLANRHV*LLGLAL
Trigger: GAGGGCCAGACCTAGCAACAAGACGTGTCTGTTGGC...TAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CCACTGCTGCAAGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGGTAGGAGAAGATGGTTaGGGTGGCGTGAATCATATT +
Preference number: 5 (lower is better)
Translates to: PLLQAPTKGALPLDQESQVGEDG*GGVNHI
Trigger: AATATGATTCACGCCACCCAAACCATCTTCTCCTAC...CTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCTTGCAGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp GTCTGTCCTTTTCAGAGGCTCATCCGGGTTGGTGACAGAAAACGTTaGATCCAAAGTGGTGTCCACAGAGAGCCACCTCCGGCACACAAA +
Preference number: 5 (lower is better)
Translates to: VCPFQRLIRVGDRKR*IQSGVHREPPPAHK
Trigger: TTTGTGTGCCGGAGGTGGCTCTCTGTGGACACCACTTTGGATGCAACGTTTTCTGTCACCAACCCGGATGAGCCTCTGAAAAGGACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp TTCTTGGCCAACAGACACGTCTTGTTGCTAGGTCTGGCCCTCACTTaGCTCACAAGCGGAAGGCCAAGGATTTTAGAAGAGCTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: FLANRHVLLLGLALT*LTSGRPRILEELSG
Trigger: TCCGGACAGCTCTTCTAAAATCCTTGGCCTTCCGCTTGTGAGGCAAGTGAGGGCCAGACCTAGCAACAAGACGTGTCTGTTGGCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp GTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATGTGAACAGGCCACTCCACTaGACAATGGGAGGGATGTCA +
Preference number: 5 (lower is better)
Translates to: VHVLVPKSRAQRGDTSDVNRPLH*TMGGMS
Trigger: TGACATCCCTCCCATTGTCAAGTGGAGTGGCCTGTT...CACATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp AGACTTCCAGGGAGGCTGACCAGTCTGTTTCTGTTTAGAGGCTGCTGGGCTGTGAGCTGGATAAAAACATaGGCTCTGGTTCCAGACCCC +
Preference number: 5 (lower is better)
Translates to: RLPGRLTSLFLFRGCWAVSWIKT*ALVPDP
Trigger: GGGGTCTGGAACCAGAGCCAATGTTTTTATCCAGCT...CACAGCCCAGCAGCCTCTAAACAGAAACAGACTGGTCAGCCTCCCTGGAAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp GGACCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCATATTCATGCCATTaGTGCAATCGCTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: GPGQLFPLKLGLKVSGCHSYSCH*CNRSFQ
Trigger: CTGGAAAGAGCGATTGCACAAATGGCATGAATATGA...GTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp AGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCAGTTGGGTTTGGGTCATaGTGTAACAAAGGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: SSHKRSSASGPGVAESHPVGFGS*CNKGRN
Trigger: GTTCCTCCCTTTGTTACACAATGACCCAAACCCAAC...TGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCGTAGGAAGCCCTCTCTaGCCTGATGATGTAGCCCTC +
Preference number: 5 (lower is better)
Translates to: LCILKLLKQALELPHRIPVGSPL*PDDVAL
Trigger: GAGGGCTACATCATCAGGCAAGAGAGGGCTTCCTAC...GGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp CGTACCGACAGGGAGAAAGAAGGCTGGTGTTATCGGCTCTGCCCCTaGATACACCACGGAACCCAGTGTATTCTCTTCTACGGAACTGAT +
Preference number: 5 (lower is better)
Translates to: RTDREKEGWCYRLCP*IHHGTQCILFYGTD
Trigger: ATCAGTTCCGTAGAAGAGAATACACTGGGTTCCGTGGTGTATTCAGGGGCAGAGCCGATAACACCAGCCTTCTTTCTCCCTGTCGGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp GAAGCTGCTCCATCTCCTCCTGTGTCATCGTCAACCCCTGCAGCCTaGTTTCTGAGTAATGGTACTTGCTGGACCACGAGAGGTTCTTAC +
Preference number: 5 (lower is better)
Translates to: EAAPSPPVSSSTPAA*FLSNGTCWTTRGSY
Trigger: GTAAGAACCTCTCGTGGTCCAGCAAGTACCATTACTCAGAAATCAGGCTGCAGGGGTTGACGATGACACAGGAGGAGATGGAGCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp ACTGGAGTCCCCATGTGGGGATGTCTGCCTCTGGGTCGTAGGACATaGTTCCATTCAGAATCAGTTCATCGGAGAACTTCACGGTTACTC +
Preference number: 5 (lower is better)
Translates to: TGVPMWGCLPLGRRT*FHSESVHRRTSRLL
Trigger: GAGTAACCGTGAAGTTCTCCGATGAACTGATTCTGAATGGAAGCATGTCCTACGACCCAGAGGCAGACATCCCCACATGGGGACTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp GTGGACACGGCAGCTCTCCTGGGGAGAGCCTTCATTTCATATTCATaGCATTTGTGCAATCGCTCTTTCCAGGACAGACCTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: VDTAALLGRAFISYS*HLCNRSFQDRPSSD
Trigger: GTCAGAGGAAGGTCTGTCCTGGAAAGAGCGATTGCACAAATGGCATGAATATGAAATGAAGGCTCTCCCCAGGAGAGCTGCCGTGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp GGCTCCGCCTTCCATTCCTACAGACACAGTGTACTGTTTTCCACGTaGTCTTCTCACCCAGCACGCAGGTACTTTGTTGCCAATCACTCT +
Preference number: 5 (lower is better)
Translates to: GSAFHSYRHSVLFST*SSHPARRYFVANHS
Trigger: AGAGTGATTGGCAACAAAGTACCTGCGTGCTGGGTGAGAAGACCACGTGGAAAACAGTACACTGTGTCTGTAGGAATGGAAGGCGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp GCTTCTGTGAGGTTTCAAAGGCTTCCTTTTCCTCGGGAGCAGAGGTaGACACGGCAGCTCTCCTGGGGAGAGCCTTCATTTCATATTCAT +
Preference number: 5 (lower is better)
Translates to: ASVRFQRLPFPREQR*TRQLSWGEPSFHIH
Trigger: ATGAATATGAAATGAAGGCTCTCCCCAGGAGAGCTGCCGTGTCCACCTCTGCTCCCGAGGAAAAGGAAGCCTTTGAAACCTCACAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp ACTGCTGCAAGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAAGCTTTCTGGGTTAATTaGGTAATCACCATCACCGAC +
Preference number: 5 (lower is better)
Translates to: TAASSHKRSSASGPGVAEAFWVN*VITITD
Trigger: GTCGGTGATGGTGATTACCAAATTAACCCAGAAAGC...TTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCTTGCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGACTCAGTAGTATGCGGTaGGGAAGAGAAAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: LCSCSCSQEQGPAWGYFRLSSMR*GRESFR
Trigger: CCGAAAGCTTTCTCTTCCCAACCGCATACTACTGAG...TCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CAGGAGGACTTGAAGAGACGCTTCCCAGGCATGGTCTGCAGAGGAGACTTCCAGTTTCCCTCGAGTTCCTaGAGCCTCACTGTAGAATTA +
Preference number: 5 (lower is better)
Translates to: QEDLKRRFPGMVCRGDFQFPSSS*SLTVEL
Trigger: TAATTCTACAGTGAGGCTCAAGGAACTCGAGGGAAA...CTGGAAGTCTCCTCTGCAGACCATGCCTGGGAAGCGTCTCTTCAAGTCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CCTGGCCAGCTCTTTCCCTTGAAGCTGGGTCTCAAAGTGAGCGGCTGCCACTCTATGTCGACGAAGAAGTaGGATTGGTCTTTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: PGQLFPLKLGLKVSGCHSMSTKK*DWSLSL
Trigger: TAGAGACAAAGACCAATCCAACTTCTTCGTCGACAT...AGAGTGGCAGCCGCTCACTTTGAGACCCAGCTTCAAGGGAAAGAGCTGGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp TGGACCACGAGAGGTTCTTACAGTACTTGGGCTTGTAGCTCCTGGTaGCTGACCTCAGGAGAATATTGCATGGTTGTACGAGGAACACAG +
Preference number: 5 (lower is better)
Translates to: WTTRGSYSTWACSSW*LTSGEYCMVVRGTQ
Trigger: CTGTGTTCCTCGTACAACCATGCAATATTCTCCTGAGGTCAGGCACCAGGAGCTACAAGCCCAAGTACTGTAAGAACCTCTCGTGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp GTCTTCTGGGTCAATGCCGTACTGTGGGTGACAATGGATTTCCCCTaGAACGCTGCTCTGTACAAACTTCTTGGCCAACAGACACGTCTT +
Preference number: 5 (lower is better)
Translates to: VFWVNAVLWVTMDFP*NAALYKLLGQQTRL
Trigger: AAGACGTGTCTGTTGGCCAAGAAGTTTGTACAGAGCAGCGTTGCAGGGGAAATCCATTGTCACCCACAGTACGGCATTGACCCAGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp CCTTACTCCAGACACTGGAATAGTGTTGTGTGTCTTCTGGGTCAATaGCGTACTGTGGGTGACAATGGATTTCCCCTGCAACGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: PYSRHWNSVVCLLGQ*RTVGDNGFPLQRCS
Trigger: AGAGCAGCGTTGCAGGGGAAATCCATTGTCACCCACAGTACGGCATTGACCCAGAAGACACACAACACTATTCCAGTGTCTGGAGTAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp CAAACAAGAGAGCTTAGCAGCATGGCCAAGCAGCAGGACAGCCTCTaGAGCCTGTTGAATGGTTTGGGGACAATTTCCGTGAAAATGGAG +
Preference number: 5 (lower is better)
Translates to: QTRELSSMAKQQDSL*SLLNGLGTISVKME
Trigger: CTCCATTTTCACGGAAATTGTCCCCAAACCATTCAACAGGCTCCAGAGGCTGTCCTGCTGCTTGGCCATGCTGCTAAGCTCTCTTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp CTTGCCAGCCTTACTCCAGACACTGGAATAGTGTTGTGTGTCTTCTaGGTCAATGCCGTACTGTGGGTGACAATGGATTTCCCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: LASLTPDTGIVLCVF*VNAVLWVTMDFPCN
Trigger: GTTGCAGGGGAAATCCATTGTCACCCACAGTACGGCATTGACCCAGAAGACACACAACACTATTCCAGTGTCTGGAGTAAGGCTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp TCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCACGGGCTCTGTCATCTaGAAGTTCCTGCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: SLHSQTLKASSGTPPQDPTGSVI*KFLLPF
Trigger: AAAGGGGAGCAGGAACTTCAAGATGACAGAGCCCGT...GGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CTTGCCATCCACTTCTCTCCCCTGATTTGCCTCTCTGTTCATGTTCTTGTTCCCCACGCAGGTACTTTGTaGCCAATCACTCTGGATCCC +
Preference number: 5 (lower is better)
Translates to: LAIHFSPLICLSVHVLVPHAGTL*PITLDP
Trigger: GGGATCCAGAGTGATTGGCAACAAAGTACCTGCGTG...GGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp ACTGCTGCAAGCTCCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAACCCCCAAGTCATTTTTaGTTGTCAGGAGGAAAGTAT +
Preference number: 5 (lower is better)
Translates to: TAASSHKRSSASGPGVAEPPSHF*LSGGKY
Trigger: ATACTTTCCTCCTGACAACAAAAAATGACTTGGGGG...TTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGGAGCTTGCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp TACGCCCTGAGGGAGTTAAAGTGGGACAGGACGCTTCAGGTCCTTGTCCCCTGCTTCTGGGGTGCCACTTaGTCTAGATTCATTTTAAGA +
Preference number: 5 (lower is better)
Translates to: YALRELKWDRTLQVLVPCFWGAT*SRFILR
Trigger: TCTTAAAATGAATCTAGACAAAGTGGCACCCCAGAA...GCAGGGGACAAGGACCTGAAGCGTCCTGTCCCACTTTAACTCCCTCAGGGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CCCACAAAAGGAGCTCTGCCTCTGGACCAGGAGTCGCAGAATCCCATCCAGAGATTACTGCTGTTCTTATaGGACATTTGGGTGTCTGCT +
Preference number: 5 (lower is better)
Translates to: PTKGALPLDQESQNPIQRLLLFL*DIWVSA
Trigger: AGCAGACACCCAAATGTCCAATAAGAACAGCAGTAA...TCTCTGGATGGGATTCTGCGACTCCTGGTCCAGAGGCAGAGCTCCTTTTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp GGGACAGGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAGAAGGAATGTTGGGTTaGGGTCATTGTGTAACAAAG +
Preference number: 5 (lower is better)
Translates to: GTGRFRSLSPALSSLHSQEGMLG*GHCVTK
Trigger: CTTTGTTACACAATGACCCAAACCCAACATTCCTTC...TTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp TCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATGACGAGGTTTTTCTGTaGAAGTCAGCCAGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: SVHVLVPKSRAQRGDTSDDEVFL*KSASEK
Trigger: CTTCTCGCTGGCTGACTTCAACAGAAAAACCTCGTC...ATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp TGGCTTGCTTGCCTAAGCCGGAACGAGGTGGCCTCTAAATCCGCTTaGCTCAAGTCAGAGGCTTTCTGGGTTAATTTGGTAATCACCATC +
Preference number: 5 (lower is better)
Translates to: WLACLSRNEVASKSA*LKSEAFWVNLVITI
Trigger: GATGGTGATTACCAAATTAACCCAGAAAGCCTCTGACTTGAGTCAAGCGGATTTAGAGGCCACCTCGTTCCGGCTTAGGCAAGCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp AGTACTTGGGCTTGTAGCTCCTGGTGCCTGACCTCAGGAGAATATTaGATGGTTGTACGAGGAACACAGACTGACAGAAGGAACAGAACG +
Preference number: 5 (lower is better)
Translates to: STWACSSWCLTSGEY*MVVRGTQTDRRNRT
Trigger: CGTTCTGTTCCTTCTGTCAGTCTGTGTTCCTCGTACAACCATGCAATATTCTCCTGAGGTCAGGCACCAGGAGCTACAAGCCCAAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CAGGAGGACTTGAAGAGACGCTTCCCAGGCATGGTCTGCAGAGGAGACTTCCAGAAATGCAGTTCTGTTTaGCTTCTGTACCACCATTCT +
Preference number: 5 (lower is better)
Translates to: QEDLKRRFPGMVCRGDFQKCSSV*LLYHHS
Trigger: AGAATGGTGGTACAGAAGCAAAACAGAACTGCATTT...CTGGAAGTCTCCTCTGCAGACCATGCCTGGGAAGCGTCTCTTCAAGTCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp TGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCTCTCAGCACGCAGGTACTTaGTTGCCAATCACTCTGGAT +
Preference number: 5 (lower is better)
Translates to: CILKLLKQALELPHRIPSQHAGT*LPITLD
Trigger: ATCCAGAGTGATTGGCAACAAAGTACCTGCGTGCTG...AGAGGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp GGGACAGGACGCTTCAGGTCCTTGTCCCCTGCTCTCTCGTCTCTGCATTCTCAAGTCAGTATTACCACATaGTCCCGAAAATACAGATCT +
Preference number: 5 (lower is better)
Translates to: GTGRFRSLSPALSSLHSQVSITT*SRKYRS
Trigger: AGATCTGTATTTTCGGGACAATGTGGTAATACTGAC...TTGAGAATGCAGAGACGAGAGAGCAGGGGACAAGGACCTGAAGCGTCCTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CTCTGTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGAGACACTGGAATAGTGTaGTGTGTCTTCTGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: LCSCSCSQEQGPAWGYFRDTGIV*CVFWVN
Trigger: ATTGACCCAGAAGACACACAACACTATTCCAGTGTC...TCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp TGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCCACAGGATCCCCTCTACAGAAAGGCTAGAGTaGACAACCCCTAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: CILKLLKQALELPHRIPSTERLE*TTPKGE
Trigger: CTCTCCCTTAGGGGTTGTCAACTCTAGCCTTTCTGT...AGAGGGGATCCTGTGGGGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp GTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATGTGGACGAAGAAGTTGGATaGGTCTTTGTCTCTAGATCG +
Preference number: 5 (lower is better)
Translates to: VHVLVPKSRAQRGDTSDVDEEVG*VFVSRS
Trigger: CGATCTAGAGACAAAGACCAATCCAACTTCTTCGTC...CACATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp GCCTGCAGGACCATGGATATGTTATACTTGAATGAAAATCTGCGCTaGGCTATGCTTCGAAGCAGGGATGATGACAGACAAACCACGCGG +
Preference number: 5 (lower is better)
Translates to: ACRTMDMLYLNENLR*AMLRSRDDDRQTTR
Trigger: CCGCGTGGTTTGTCTGTCATCATCCCTGCTTCGAAGCATAGCTCAGCGCAGATTTTCATTCAAGTATAACATATCCATGGTCCTGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp GCTGTTCTTATTGGACATTTGGGTGTCTGCTTTCTCATGCTTCTGTaGGGTTTCAAAGGCTTCCTTTTCCTCGGGAGCAGAGGTGGACAC +
Preference number: 5 (lower is better)
Translates to: AVLIGHLGVCFLMLL*GFKGFLFLGSRGGH
Trigger: GTGTCCACCTCTGCTCCCGAGGAAAAGGAAGCCTTTGAAACCTCACAGAAGCATGAGAAAGCAGACACCCAAATGTCCAATAAGAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp GACACTGGAATAGTGTTGTGTGTCTTCTGGGTCAATGCCGTACTGTaGGTGACAATGGATTTCCCCTGCAACGCTGCTCTGTACAAACTT +
Preference number: 5 (lower is better)
Translates to: DTGIVLCVFWVNAVL*VTMDFPCNAALYKL
Trigger: AAGTTTGTACAGAGCAGCGTTGCAGGGGAAATCCATTGTCACCCACAGTACGGCATTGACCCAGAAGACACACAACACTATTCCAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp CTAAGGGAGAGACTTCGAATACAACCGAAATGCTACACATCAGACTaGTGTCTGGATTCAGAGTGGTCAGTTCCACAATCACGGCCCATG +
Preference number: 5 (lower is better)
Translates to: LRERLRIQPKCYTSD*CLDSEWSVPQSRPM
Trigger: CATGGGCCGTGATTGTGGAACTGACCACTCTGAATCCAGACACCAGTCTGATGTGTAGCATTTCGGTTGTATTCGAAGTCTCTCCCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp AGTATGGTCAGAAACAACAGGAAAGCCAAGATGATTCTCATGAAGTaGTCAACCCGAGAAACGGCATGGAAGGGAATGAAGGCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: SMVRNNRKAKMILMK*STRETAWKGMKASG
Trigger: CCCCGAAGCCTTCATTCCCTTCCATGCCGTTTCTCGGGTTGACCACTTCATGAGAATCATCTTGGCTTTCCTGTTGTTTCTGACCATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CTTGCCATCCACTTCTCTCCCCTGATTTGCCTCTCTGTTCATGTTCTTGTTCCCTGTCCGGAAGGAATGTaGGGTTTGGGTCATTGTGTA +
Preference number: 5 (lower is better)
Translates to: LAIHFSPLICLSVHVLVPCPEGM*GLGHCV
Trigger: TACACAATGACCCAAACCCAACATTCCTTCCGGACA...GGGAACAAGAACATGAACAGAGAGGCAAATCAGGGGAGAGAAGTGGATGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CCTGCTCTCTCGTCTCTGCATTCTCAAACTCTTAAAGCAAGCTCTGGAACTCCCCACTTGAGAGAGAAGTaGAGCAGGTTGTACACACTC +
Preference number: 5 (lower is better)
Translates to: PALSSLHSQTLKASSGTPHLREK*SRLYTL
Trigger: GAGTGTGTACAACCTGCTCAACTTCTCTCTCAAGTG...GGGAGTTCCAGAGCTTGCTTTAAGAGTTTGAGAATGCAGAGACGAGAGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp AGAGACTGTTTGACGAGGTGCTCCAGGAGACGGGCTCTGTCATCTTaGAGTTCCTGCTCCCCTTTTATGTTATTCAAGACAGAAATCACC +
Preference number: 5 (lower is better)
Translates to: RDCLTRCSRRRALSS*SSCSPFMLFKTEIT
Trigger: GGTGATTTCTGTCTTGAATAACATAAAAGGGGAGCAGGAACTTCAAGATGACAGAGCCCGTCTCCTGGAGCACCTCGTCAAACAGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp CCTGACCTCAGGAGAATATTGCATGGTTGTACGAGGAACACAGACTaGCAGAAGGAACAGAACGACGCAAAGAGCCACTCTATTGACTTG +
Preference number: 5 (lower is better)
Translates to: PDLRRILHGCTRNTD*QKEQNDAKSHSIDL
Trigger: CAAGTCAATAGAGTGGCTCTTTGCGTCGTTCTGTTCCTTCTGTCAGTCTGTGTTCCTCGTACAACCATGCAATATTCTCCTGAGGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp AGAGACTTCGAATACAACCGAAATGCTACACATCAGACTGGTGTCTaGATTCAGAGTGGTCAGTTCCACAATCACGGCCCATGTCAACTC +
Preference number: 5 (lower is better)
Translates to: RDFEYNRNATHQTGV*IQSGQFHNHGPCQL
Trigger: GAGTTGACATGGGCCGTGATTGTGGAACTGACCACTCTGAATCCAGACACCAGTCTGATGTGTAGCATTTCGGTTGTATTCGAAGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp GTTCATGTTCTTGTTCCCAAGAGCAGGGCCCAGCGTGGGGATACTTCAGATGTGATCATTTTCTTCCCGTaGATATTTCTGGCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: VHVLVPKSRAQRGDTSDVIIFFP*IFLAFS
Trigger: ACTGAAGGCCAGAAATATCAACGGGAAGAAAATGAT...CACATCTGAAGTATCCCCACGCTGGGCCCTGCTCTTGGGAACAAGAACATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp AAGGCCAGTTCAGTGAATCCTGCTCTGGGTGGCAGACAGCCTGGTTaGTCACTAATACATAGTTGCCACTATAGTATCTTGGATTTGTGG +
Preference number: 5 (lower is better)
Translates to: KASSVNPALGGRQPG*SLIHSCHYSILDLW
Trigger: CCACAAATCCAAGATACTATAGTGGCAACTATGTATTAGTGATCAACCAGGCTGTCTGCCACCCAGAGCAGGATTCACTGAACTGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp AAGTCAGAGGCTTTCTGGGTTAATTTGGTAATCACCATCACCGACTaGCCGATCTCATCCGCTGTGTTCATAGCAAACGTGAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: KSEAFWVNLVITITD*PISSAVFIANVRDC
Trigger: ACAGTCTCTCACGTTTGCTATGAACACAGCGGATGAGATCGGTCAGTCGGTGATGGTGATTACCAAATTAACCCAGAAAGCCTCTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp TCATTAGGAACAAGGAAAGTGGCCATCAGATTGGTGGGCGTGAGCTaGCAGCCTTCATATACCAAGGCCTCAAACAACACTGTCACATTT +
Preference number: 5 (lower is better)
Translates to: SLGTRKVAIRLVGVS*QPSYTKASNNTVTF
Trigger: AAATGTGACAGTGTTGTTTGAGGCCTTGGTATATGAAGGCTGTCAGCTCACGCCCACCAATCTGATGGCCACTTTCCTTGTTCCTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp TCAGGACAAAACGCGATGCCTGCAGGACCATGGATATGTTATACTTaGATGAAAATCTGCGCTGAGCTATGCTTCGAAGCAGGGATGATG +
Preference number: 5 (lower is better)
Translates to: SGQNAMPAGPWICYT*MKICAELCFEAGMM
Trigger: CATCATCCCTGCTTCGAAGCATAGCTCAGCGCAGATTTTCATTCAAGTATAACATATCCATGGTCCTGCAGGCATCGCGTTTTGTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp ATACAGATCTATCACATCCCTGTGCAAGGCCCAGAAAGCCAGAATTaGATACAAGATCATAATGAAAAGCACGGCCAGGAAAGTCGCAGG +
Preference number: 5 (lower is better)
Translates to: IQIYHIPVQGPESQN*IQDHNEKHGQESRR
Trigger: CCTGCGACTTTCCTGGCCGTGCTTTTCATTATGATCTTGTATGCAATTCTGGCTTTCTGGGCCTTGCACAGGGATGTGATAGATCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp CTGACACGCAGTAGGAGAAGATGGTTTGGGTGGCGTGAATCATATTaGTGTAATTCCATTCATGCTGACCGAACACCAAGTACCCAAAAG +
Preference number: 5 (lower is better)
Translates to: LTRSRRRWFGWRESY*CNSIHADRTPSTQK
Trigger: CTTTTGGGTACTTGGTGTTCGGTCAGCATGAATGGAATTACAGCAATATGATTCACGCCACCCAAACCATCTTCTCCTACTGCGTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp GGTTGGGAAGAGAAAGCTTTCGGAGGGACACCTTCACTGGCTTCTTaGTTATTGTTACTGCTGTTCTTATTGGACATTTGGGTGTCTGCT +
Preference number: 5 (lower is better)
Translates to: GWEEKAFGGTPSLAS*LLLLLFLLDIWVSA
Trigger: AGCAGACACCCAAATGTCCAATAAGAACAGCAGTAACAATAACCAAGAAGCCAGTGAAGGTGTCCCTCCGAAAGCTTTCTCTTCCCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp GACCGTGCTTGCGTTCAGTGTCGCACGGAGGCAGTTTGGACAGAGTaGATCATTTCTGAAGGCCTTAAAAACATTCCAGTTTTCAACTTT +
Preference number: 5 (lower is better)
Translates to: DRACVQCRTEAVWTE*IISEGLKNIPVFNF
Trigger: AAAGTTGAAAACTGGAATGTTTTTAAGGCCTTCAGAAATGATTCACTCTGTCCAAACTGCCTCCGTGCGACACTGAACGCAAGCACGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp TTGTTACTGCTGTTCTTATTGGACATTTGGGTGTCTGCTTTCTCATaGTTCTGTGAGGTTTCAAAGGCTTCCTTTTCCTCGGGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: LLLLFLLDIWVSAFS*FCEVSKASFSSGAE
Trigger: CTCTGCTCCCGAGGAAAAGGAAGCCTTTGAAACCTCACAGAAGCATGAGAAAGCAGACACCCAAATGTCCAATAAGAACAGCAGTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp TTGGGCAGTTCAGAAACAGAGAAAATCTATCTGACACACCTAACGTaGGGCCACAATTTTCAATGCAGGAAATGTGTGCCTTGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: LGSSETEKIYLTHLT*GHNFQCRKCVPWAE
Trigger: TTCAGCCCAAGGCACACATTTCCTGCATTGAAAATTGTGGCCCCACGTTAGGTGTGTCAGATAGATTTTCTCTGTTTCTGAACTGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp ACTTCATGGCCCGTTAGAGACAAAATGGACCAGCTATACAAATCCTaGCGGCCACAACTTGGGCAGTTCAGAAACAGAGAAAATCTATCT +
Preference number: 5 (lower is better)
Translates to: TSWPVRDKMDQLYKS*RPQLGQFRNRENLS
Trigger: AGATAGATTTTCTCTGTTTCTGAACTGCCCAAGTTGTGGCCGCCAGGATTTGTATAGCTGGTCCATTTTGTCTCTAACGGGCCATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CTCTTTAGTCCCCTTGAGAAACATAAGTCATGTTTGGGACACTCTTTGCTTGTGTTGCTCCCCGGAACCTaGTTAGCCAGTATTGTGTCT +
Preference number: 5 (lower is better)
Translates to: LFSPLEKHKSCLGHSLLVLLPGT*LASIVS
Trigger: AGACACAATACTGGCTAACAAGGTTCCGGGGAGCAA...CACAAGCAAAGAGTGTCCCAAACATGACTTATGTTTCTCAAGGGGACTAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp CCCCTGAATACACCACGGAACCCAGTGTATTCTCTTCTACGGAACTaGTCGCGCCAATGCTGTCCAACTCAGATACTATTATTTTATACT +
Preference number: 5 (lower is better)
Translates to: PLNTPRNPVYSLLRN*SRQCCPTQILLFYT
Trigger: AGTATAAAATAATAGTATCTGAGTTGGACAGCATTGGCGCGATCAGTTCCGTAGAAGAGAATACACTGGGTTCCGTGGTGTATTCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp CACAGACTGACAGAAGGAACAGAACGACGCAAAGAGCCACTCTATTaGCTTGGCATAGCCGTAAGTCACGCCGTAAAATACAATAAAGAA +
Preference number: 5 (lower is better)
Translates to: HRLTEGTERRKEPLY*LGIAVSHAVKYNKE
Trigger: TTCTTTATTGTATTTTACGGCGTGACTTACGGCTATGCCAAGTCAATAGAGTGGCTCTTTGCGTCGTTCTGTTCCTTCTGTCAGTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp ATGGCGAATAAACTGGTTATAGTAGAAGCTGTCGTTGTGGCGCAGTaGGAAAATGAGCAACAGGAGAAGGGTCAGGAATATGAAGTGAGT +
Preference number: 5 (lower is better)
Translates to: MANKLVIVEAVVVAQ*ENEQQEKGQEYEVS
Trigger: ACTCACTTCATATTCCTGACCCTTCTCCTGTTGCTCATTTTCTCACTGCGCCACAACGACAGCTTCTACTATAACCAGTTTATTCGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp CACTTCTGCTATGTCGGGTGTGATCTCTATGACCTTATTGTTATCTaGGACTCCAGTCATCCTGAACCCAACCACATCTACAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: HFCYVGCDLYDLIVI*DSSHPEPNHIYRNV
Trigger: AACATTTCTGTAGATGTGGTTGGGTTCAGGATGACTGGAGTCGCAGATAACAATAAGGTCATAGAGATCACACCCGACATAGCAGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp AAGCTTTCGGAGGGACACCTTCACTGGCTTCTTGGTTATTGTTACTaGTGTTCTTATTGGACATTTGGGTGTCTGCTTTCTCATGCTTCT +
Preference number: 5 (lower is better)
Translates to: KLSEGHLHWLLGYCY*CSYWTFGCLLSHAS
Trigger: AGAAGCATGAGAAAGCAGACACCCAAATGTCCAATAAGAACAGCAGTAACAATAACCAAGAAGCCAGTGAAGGTGTCCCTCCGAAAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 90 bp GTACTTTGTTGCCAATCACTCTGGATCCCATACATGTCCAAACAGTaGACCATAAAGAGAGCAATTCTCACTAGCTTGTTAGTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: VLCCQSLWIPYMSKQ*TIKRAILTSLLVGF
Trigger: GAAGCCCACTAACAAGCTAGTGAGAATTGCTCTCTTTATGGTTCACTGTTTGGACATGTATGGGATCCAGAGTGATTGGCAACAAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp CTCGTACACAGGCTGCTTCATCTCATCATAGGCAGACAGAATCACTaGCTGAAACAAGTTGATGAAGATACAGATCATCACCAACATGAA +
Preference number: 5 (lower is better)
Translates to: LVHRLLHLIIGRQNH*LKQVDEDTDHHQHE
Trigger: TTCATGTTGGTGATGATCTGTATCTTCATCAACTTGTTTCAGGCAGTGATTCTGTCTGCCTATGATGAGATGAAGCAGCCTGTGTACGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 90 bp GTGATTACGACGCTCTCGATGCCTATCAGCATTGACCTGATAATGTaGATGTGTCTGGACTCAATTTTCTCCTTTTGGTTCAAGTTAAAA +
Preference number: 5 (lower is better)
Translates to: VITTLSMPISIDLIM*MCLDSIFSFWFKLK
Trigger: TTTTAACTTGAACCAAAAGGAGAAAATTGAGTCCAGACACATGCACATTATCAGGTCAATGCTGATAGGCATCGAGAGCGTCGTAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 90 bp ACTACATTCAACAGCAAATTTAGTAACCATGGAAATCCCACTAGCTaGATTTATCTTGCATTTGCCAACTCGAGGGCCATGGTTAATGAC +
Preference number: 5 (lower is better)
Translates to: TTFNSKFSNHGNPTS*IYLAFANSRAMVND
Trigger: GTCATTAACCATGGCCCTCGAGTTGGCAAATGCAAGATAAATCCAGCTAGTGGGATTTCCATGGTTACTAAATTTGCTGTTGAATGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS-3UTR CAA 90 bp CTCTTTAGTCCCCTTGAGAAACATAAGTCATGTTTGGGACACTCTTTGCTTGTGAGCCAAATGCGCTTGTaGAAGAGATTTTCTACTTTG +
Preference number: 5 (lower is better)
Translates to: LFSPLEKHKSCLGHSLLVSQMRL*KRFSTL
Trigger: CAAAGTAGAAAATCTCTTCAACAAGCGCATTTGGCT...CACAAGCAAAGAGTGTCCCAAACATGACTTATGTTTCTCAAGGGGACTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp TGCGGGGTCCGAAGAGTTGACTTTCAGGAGGACGCGTaGAGCTGCGCCCGAGGGACACCTACGGGGCGGCGT +
Preference number: 6 (lower is better)
Translates to: CGVRRVDFQEDA*SCARGTPTGRR
Trigger: ACGCCGCCCCGTAGGTGTCCCTCGGGCGCAGCTGCACGCGTCCTCCTGAAAGTCAACTCTTCGGACCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp GTCCGAAGAGTTGACTTTCAGGAGGACGCGTGCAGCTaGGCCCGAGGGACACCTACGGGGCGGCGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: VRRVDFQEDACS*ARGTPTGRRRA
Trigger: AGCCCTACGCCGCCCCGTAGGTGTCCCTCGGGCGCAGCTGCACGCGTCCTCCTGAAAGTCAACTCTTCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp TTGATCTTCACTGGCTGCATGATACAGGGGGCCGTCTaGCAGGACACGTTAGCCTTGGCGGCTGCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LIFTGCMIQGAV*QDTLALAAAGS
Trigger: GGACCCCGCAGCCGCCAAGGCTAACGTGTCCTGCCAGACGGCCCCCTGTATCATGCAGCCAGTGAAGATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp GGGATGTGGAGGGAGAAACCCTTAGACACTGCCACCTaGGGCAAGAGCACAGGTCGGTTCCAATCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: GMWREKPLDTAT*GKSTGRFQSGV
Trigger: CACCCCTGATTGGAACCGACCTGTGCTCTTGCCGCAGGTGGCAGTGTCTAAGGGTTTCTCCCTCCACATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp AAGGGGAGCGTTCTGGTCCTTCCTGTTGATCTTCACTaGCTGCATGATACAGGGGGCCGTCTGGCAGGACAC +
Preference number: 6 (lower is better)
Translates to: KGSVLVLPVDLH*LHDTGGRLAGH
Trigger: GTGTCCTGCCAGACGGCCCCCTGTATCATGCAGCCAGTGAAGATCAACAGGAAGGACCAGAACGCTCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp AAGCCGTGTGGCAGATGCCAGGAAGGGCAGCCTGGATaGCCTTCTGAGCCAGGCGCACATTATAGAAGAACC +
Preference number: 6 (lower is better)
Translates to: KPCGRCQEGQPG*PSEPGAHYRRT
Trigger: GGTTCTTCTATAATGTGCGCCTGGCTCAGAAGGCCATCCAGGCTGCCCTTCCTGGCATCTGCCACACGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp GGAGCGTTCTGGTCCTTCCTGTTGATCTTCACTGGCTaGATGATACAGGGGGCCGTCTGGCAGGACACGTTA +
Preference number: 6 (lower is better)
Translates to: GAFWSFLLIFTG*MIQGAVWQDTL
Trigger: TAACGTGTCCTGCCAGACGGCCCCCTGTATCATGCAGCCAGTGAAGATCAACAGGAAGGACCAGAACGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp GACCTCCTCCGGATCCTGTTCTCCCGCCTGAGGATCTaGATTTTGTCCTCAGTGATGGGCTGGTACATGCTC +
Preference number: 6 (lower is better)
Translates to: DLLRILFSRLRI*ILSSVMGWYML
Trigger: GAGCATGTACCAGCCCATCACTGAGGACAAAATCCAGATCCTCAGGCGGGAGAACAGGATCCGGAGGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CTGCTCAGGATAAGGGGAGCGTTCTGGTCCTTCCTGTaGATCTTCACTGGCTGCATGATACAGGGGGCCGTC +
Preference number: 6 (lower is better)
Translates to: LLRIRGAFWSFL*IFTGCMIQGAV
Trigger: GACGGCCCCCTGTATCATGCAGCCAGTGAAGATCAACAGGAAGGACCAGAACGCTCCCCTTATCCTGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp AGCAGGGATGATGACAGACAAACCACGCGGGCCTCCTaGACTGAACAGGTTGGGTCAAACAGGCCACTCCAC +
Preference number: 6 (lower is better)
Translates to: SRDDDRQTTRAS*TEQVGSNRPLH
Trigger: GTGGAGTGGCCTGTTTGACCCAACCTGTTCAGTCAAGGAGGCCCGCGTGGTTTGTCTGTCATCATCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp GCAACGCTGCTCTGTACAAACTTCTTGGCCAACAGACACGTCTTGTaGCTAGGTCTGGCCCTCACTTGCCTCACAAGCGGAAGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: ATLLCTNFLANRHVL*LGLALTCLTSGRPR
Trigger: CCTTGGCCTTCCGCTTGTGAGGCAAGTGAGGGCCAGACCTAGCAACAAGACGTGTCTGTTGGCCAAGAAGTTTGTACAGAGCAGCGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp CCTGCAACGCTGCTCTGTACAAACTTCTTGGCCAACAGACACGTCTaGTTGCTAGGTCTGGCCCTCACTTGCCTCACAAGCGGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: PATLLCTNFLANRHV*LLGLALTCLTSGRP
Trigger: TGGCCTTCCGCTTGTGAGGCAAGTGAGGGCCAGACCTAGCAACAAGACGTGTCTGTTGGCCAAGAAGTTTGTACAGAGCAGCGTTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp ACAGAGCCCACTGCCCAAGGCCAGTTCAGTGAATCCTaGTCTGGGTGGCAGACAGCCTGGTTGATCACTAAT +
Preference number: 6 (lower is better)
Translates to: TEPTAQGQFSES*SGWQTAWLITN
Trigger: ATTAGTGATCAACCAGGCTGTCTGCCACCCAGAGCAGGATTCACTGAACTGGCCTTGGGCAGTGGGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp GAGCTTAGCAGCATGGCCAAGCAGCAGGACAGCCTCTaGAGCCTGTTGAATGGTTTGGGGACAATTTCCGTG +
Preference number: 6 (lower is better)
Translates to: ELSSMAKQQDSL*SLLNGLGTISV
Trigger: CACGGAAATTGTCCCCAAACCATTCAACAGGCTCCAGAGGCTGTCCTGCTGCTTGGCCATGCTGCTAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp AGGTTTCAAAGGCTTCCTTTTCCTCGGGAGCAGAGGTaGACACGGCAGCTCTCCTGGGGAGAGCCTTCATTT +
Preference number: 6 (lower is better)
Translates to: RFQRLPFPREQR*TRQLSWGEPSF
Trigger: AAATGAAGGCTCTCCCCAGGAGAGCTGCCGTGTCCACCTCTGCTCCCGAGGAAAAGGAAGCCTTTGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp CTTCTTGGCCAACAGACACGTCTTGTTGCTAGGTCTGGCCCTCACTaGCCTCACAAGCGGAAGGCCAAGGATTTTAGAAGAGCTGTCCGG +
Preference number: 6 (lower is better)
Translates to: LLGQQTRLVARSGPH*PHKRKAKDFRRAVR
Trigger: CCGGACAGCTCTTCTAAAATCCTTGGCCTTCCGCTTGTGAGGCAAGTGAGGGCCAGACCTAGCAACAAGACGTGTCTGTTGGCCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp TTTCAGAGGCTCATCCGGGTTGGTGACAGAAAACGTTaGATCCAAAGTGGTGTCCACAGAGAGCCACCTCCG +
Preference number: 6 (lower is better)
Translates to: FQRLIRVGDRKR*IQSGVHREPPP
Trigger: CGGAGGTGGCTCTCTGTGGACACCACTTTGGATGCAACGTTTTCTGTCACCAACCCGGATGAGCCTCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp TCGTTCACAGAGGCCACCGAAAAGTACACCCAGCTCTaGCGAATGACCAAGGCATCAGGACAGTACCAACGC +
Preference number: 6 (lower is better)
Translates to: SFTEATEKYTQL*RMTKASGQYQR
Trigger: GCGTTGGTACTGTCCTGATGCCTTGGTCATTCGCAAGAGCTGGGTGTACTTTTCGGTGGCCTCTGTGAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CTGGTACCCTCCGTTCCCATAAGCTGGATAAAAACATaGGCTCTGGTTCCAGACCCCCAGCGACTCCCAGTA +
Preference number: 6 (lower is better)
Translates to: LVPSVPISWIKT*ALVPDPQRLPV
Trigger: TACTGGGAGTCGCTGGGGGTCTGGAACCAGAGCCAATGTTTTTATCCAGCTTATGGGAACGGAGGGTACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CTCCGGATCCTGTTCTCCCGCCTGAGGATCTGGATTTaGTCCTCAGTGATGGGCTGGTACATGCTCAAGCTT +
Preference number: 6 (lower is better)
Translates to: LRILFSRLRIWI*SSVMGWYMLKL
Trigger: AAGCTTGAGCATGTACCAGCCCATCACTGAGGACAAAATCCAGATCCTCAGGCGGGAGAACAGGATCCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp GAAGAGCTGTCCGGAAGGAATGTTGGGTTTGGGTCATaGTGTAACAAAGGGAGGAACACGCCGTGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: EELSGRNVGFGS*CNKGRNTPWSQ
Trigger: CTGGCTCCACGGCGTGTTCCTCCCTTTGTTACACAATGACCCAAACCCAACATTCCTTCCGGACAGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp CGGGCCTCCTTGACTGAACAGGTTGGGTCAAACAGGCCACTCCACTaGACAATGGGAGGGATGTCATTAGGAACAAGGAAAGTGGCCATC +
Preference number: 6 (lower is better)
Translates to: RASLTEQVGSNRPLH*TMGGMSLGTRKVAI
Trigger: GATGGCCACTTTCCTTGTTCCTAATGACATCCCTCCCATTGTCAAGTGGAGTGGCCTGTTTGACCCAACCTGTTCAGTCAAGGAGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp ATGCTTCGAAGCAGGGATGATGACAGACAAACCACGCGGGCCTCCTaGACTGAACAGGTTGGGTCAAACAGGCCACTCCACTTGACAATG +
Preference number: 6 (lower is better)
Translates to: MLRSRDDDRQTTRAS*TEQVGSNRPLHLTM
Trigger: CATTGTCAAGTGGAGTGGCCTGTTTGACCCAACCTGTTCAGTCAAGGAGGCCCGCGTGGTTTGTCTGTCATCATCCCTGCTTCGAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp CCATCTCCTCCTGTGTCATCGTCAACCCCTGCAGCCTaGTTTCTGAGTAATGGTACTTGCTGGACCACGAGA +
Preference number: 6 (lower is better)
Translates to: PSPPVSSSTPAA*FLSNGTCWTTR
Trigger: TCTCGTGGTCCAGCAAGTACCATTACTCAGAAATCAGGCTGCAGGGGTTGACGATGACACAGGAGGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp CTTAGGTACCAGCTAGGTGCTTCGCCCGAATTGTCATaGCACACTCGGATGGAATGGATATCCCCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: LRYQLGASPELS*HTRMEWISPKS
Trigger: TGACTTGGGGGATATCCATTCCATCCGAGTGTGGCATGACAATTCGGGCGAAGCACCTAGCTGGTACCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp GCTTCCTCGTCTCTGCTCAGGATAAGGGGAGCGTTCTaGTCCTTCCTGTTGATCTTCACTGGCTGCATGATA +
Preference number: 6 (lower is better)
Translates to: ASSSLLRIRGAF*SFLLIFTGCMI
Trigger: TATCATGCAGCCAGTGAAGATCAACAGGAAGGACCAGAACGCTCCCCTTATCCTGAGCAGAGACGAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp TTTCCTCGGGAGCAGAGGTGGACACGGCAGCTCTCCTaGGGAGAGCCTTCATTTCATATTCATGCCATTTGT +
Preference number: 6 (lower is better)
Translates to: FPREQRWTRQLS*GEPSFHIHAIC
Trigger: ACAAATGGCATGAATATGAAATGAAGGCTCTCCCCAGGAGAGCTGCCGTGTCCACCTCTGCTCCCGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp ACCAAGGCATCAGGACAGTACCAACGCACAGTGATATaGAGGGTGGCTTCCTCGTCTCTGCTCAGGATAAGG +
Preference number: 6 (lower is better)
Translates to: TKASGQYQRTVI*RVASSSLLRIR
Trigger: CCTTATCCTGAGCAGAGACGAGGAAGCCACCCTCAATATCACTGTGCGTTGGTACTGTCCTGATGCCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp TCATCCGCTGTGTTCATAGCAAACGTGAGAGACTGTTaGACGAGGTGCTCCAGGAGACGGGCTCTGTCATCT +
Preference number: 6 (lower is better)
Translates to: SSAVFIANVRDC*TRCSRRRALSS
Trigger: AGATGACAGAGCCCGTCTCCTGGAGCACCTCGTCAAACAGTCTCTCACGTTTGCTATGAACACAGCGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp ATTCGACTTAGGTACCAGCTAGGTGCTTCGCCCGAATaGTCATGCCACACTCGGATGGAATGGATATCCCCC +
Preference number: 6 (lower is better)
Translates to: IRLRYQLGASPE*SCHTRMEWISP
Trigger: GGGGGATATCCATTCCATCCGAGTGTGGCATGACAATTCGGGCGAAGCACCTAGCTGGTACCTAAGTCGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CTCTGTACAAACTTCTTGGCCAACAGACACGTCTTGTaGCTAGGTCTGGCCCTCACTTGCCTCACAAGCGGA +
Preference number: 6 (lower is better)
Translates to: LCTNFLANRHVL*LGLALTCLTSG
Trigger: TCCGCTTGTGAGGCAAGTGAGGGCCAGACCTAGCAACAAGACGTGTCTGTTGGCCAAGAAGTTTGTACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CTGCTCTGTACAAACTTCTTGGCCAACAGACACGTCTaGTTGCTAGGTCTGGCCCTCACTTGCCTCACAAGC +
Preference number: 6 (lower is better)
Translates to: LLCTNFLANRHV*LLGLALTCLTS
Trigger: GCTTGTGAGGCAAGTGAGGGCCAGACCTAGCAACAAGACGTGTCTGTTGGCCAAGAAGTTTGTACAGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp AGGGAGAAAGAAGGCTGGTGTTATCGGCTCTGCCCCTaGATACACCACGGAACCCAGTGTATTCTCTTCTAC +
Preference number: 6 (lower is better)
Translates to: REKEGWCYRLCP*IHHGTQCILFY
Trigger: GTAGAAGAGAATACACTGGGTTCCGTGGTGTATTCAGGGGCAGAGCCGATAACACCAGCCTTCTTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp CTCCTGTGTCATCGTCAACCCCTGCAGCCTGATTTCTaGGTAATGGTACTTGCTGGACCACGAGAGGTTCTT +
Preference number: 6 (lower is better)
Translates to: LLCHRQPLQPDF*VMVLAGPREVL
Trigger: AAGAACCTCTCGTGGTCCAGCAAGTACCATTACTCAGAAATCAGGCTGCAGGGGTTGACGATGACACAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp TGTTGTGTGTCTTCTGGGTCAATGCCGTACTGTGGGTaGCAATGGATTTCCCCTGCAACGCTGCTCTGTACA +
Preference number: 6 (lower is better)
Translates to: CCVSSGSMPYCG*QWISPATLLCT
Trigger: TGTACAGAGCAGCGTTGCAGGGGAAATCCATTGTCACCCACAGTACGGCATTGACCCAGAAGACACACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp CACGTGGTCTTCTCACCCAGCACGCAGGTACTTTGTTaGCAATCACTCTGGATCCCATACATGTCCAAACAG +
Preference number: 6 (lower is better)
Translates to: HVVFSPSTQVLC*QSLWIPYMSKQ
Trigger: CTGTTTGGACATGTATGGGATCCAGAGTGATTGGCAACAAAGTACCTGCGTGCTGGGTGAGAAGACCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp GCTTGTAGCTCCTGGTGCCTGACCTCAGGAGAATATTaGATGGTTGTACGAGGAACACAGACTGACAGAAGG +
Preference number: 6 (lower is better)
Translates to: ACSSWCLTSGEY*MVVRGTQTDRR
Trigger: CCTTCTGTCAGTCTGTGTTCCTCGTACAACCATGCAATATTCTCCTGAGGTCAGGCACCAGGAGCTACAAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp AACAGACACGTCTTGTTGCTAGGTCTGGCCCTCACTTaGCTCACAAGCGGAAGGCCAAGGATTTTAGAAGAG +
Preference number: 6 (lower is better)
Translates to: NRHVLLLGLALT*LTSGRPRILEE
Trigger: CTCTTCTAAAATCCTTGGCCTTCCGCTTGTGAGGCAAGTGAGGGCCAGACCTAGCAACAAGACGTGTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp CGTACTGTGGGTGACAATGGATTTCCCCTGCAACGCTaGTCTGTACAAACTTCTTGGCCAACAGACACGTCT +
Preference number: 6 (lower is better)
Translates to: RTVGDNGFPLQR*SVQTSWPTDTS
Trigger: AGACGTGTCTGTTGGCCAAGAAGTTTGTACAGAGCAGCGTTGCAGGGGAAATCCATTGTCACCCACAGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp GTCAATGCCGTACTGTGGGTGACAATGGATTTCCCCTaGAACGCTGCTCTGTACAAACTTCTTGGCCAACAG +
Preference number: 6 (lower is better)
Translates to: VNAVLWVTMDFP*NAALYKLLGQQ
Trigger: CTGTTGGCCAAGAAGTTTGTACAGAGCAGCGTTGCAGGGGAAATCCATTGTCACCCACAGTACGGCATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp ATAGTGTTGTGTGTCTTCTGGGTCAATGCCGTACTGTaGGTGACAATGGATTTCCCCTGCAACGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: IVLCVFWVNAVL*VTMDFPCNAAL
Trigger: CAGAGCAGCGTTGCAGGGGAAATCCATTGTCACCCACAGTACGGCATTGACCCAGAAGACACACAACACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CTGGTCCTCAGAGCAGTGGTCTTGCTCCCCGGAACCTaGTTAGCCAGTATTGTGTCTGATAGTGATTCGACT +
Preference number: 6 (lower is better)
Translates to: LVLRAVVLLPGT*LASIVSDSDST
Trigger: AGTCGAATCACTATCAGACACAATACTGGCTAACAAGGTTCCGGGGAGCAAGACCACTGCTCTGAGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CAACAGACACGTCTTGTTGCTAGGTCTGGCCCTCACTaGCCTCACAAGCGGAAGGCCAAGGATTTTAGAAGA +
Preference number: 6 (lower is better)
Translates to: QQTRLVARSGPH*PHKRKAKDFRR
Trigger: TCTTCTAAAATCCTTGGCCTTCCGCTTGTGAGGCAAGTGAGGGCCAGACCTAGCAACAAGACGTGTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CAGGTTGTACACACTCCTTATGTAGGAAGCCCTCTCTaGCCTGATGATGTAGCCCTCGTCCACAACATAGGC +
Preference number: 6 (lower is better)
Translates to: QVVHTPYVGSPL*PDDVALVHNIG
Trigger: GCCTATGTTGTGGACGAGGGCTACATCATCAGGCAAGAGAGGGCTTCCTACATAAGGAGTGTGTACAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CGGCTGCCCATAGAGCATGTCGACGAAGAAGTTGGATaGGTCTTTGTCTCTAGATCGGGTGGTGAGAAAGTC +
Preference number: 6 (lower is better)
Translates to: RLPIEHVDEEVG*VFVSRSGGEKV
Trigger: GACTTTCTCACCACCCGATCTAGAGACAAAGACCAATCCAACTTCTTCGTCGACATGCTCTATGGGCAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp TGCCTAAGCCGGAACGAGGTGGCCTCTAAATCCGCTTaGCTCAAGTCAGAGGCTTTCTGGGTTAATTTGGTA +
Preference number: 6 (lower is better)
Translates to: CLSRNEVASKSA*LKSEAFWVNLV
Trigger: TACCAAATTAACCCAGAAAGCCTCTGACTTGAGTCAAGCGGATTTAGAGGCCACCTCGTTCCGGCTTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp ACAAGGAAAGTGGCCATCAGATTGGTGGGCGTGAGCTaGCAGCCTTCATATACCAAGGCCTCAAACAACACT +
Preference number: 6 (lower is better)
Translates to: TRKVAIRLVGVS*QPSYTKASNNT
Trigger: AGTGTTGTTTGAGGCCTTGGTATATGAAGGCTGTCAGCTCACGCCCACCAATCTGATGGCCACTTTCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp AGAAGTCTGTCCTTTTCAGAGGCTCATCCGGGTTGGTaGCAGAAAACGTTGCATCCAAAGTGGTGTCCACAG +
Preference number: 6 (lower is better)
Translates to: RSLSFSEAHPGW*QKTLHPKWCPQ
Trigger: CTGTGGACACCACTTTGGATGCAACGTTTTCTGTCACCAACCCGGATGAGCCTCTGAAAAGGACAGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp GCAGCTCTCCTGGGGAGAGCCTTCATTTCATATTCATaGCATTTGTGCAATCGCTCTTTCCAGGACAGACCT +
Preference number: 6 (lower is better)
Translates to: AALLGRAFISYS*HLCNRSFQDRP
Trigger: AGGTCTGTCCTGGAAAGAGCGATTGCACAAATGGCATGAATATGAAATGAAGGCTCTCCCCAGGAGAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp TTCCATTCCTACAGACACAGTGTACTGTTTTCCACGTaGTCTTCTCACCCAGCACGCAGGTACTTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: FHSYRHSVLFST*SSHPARRYFVA
Trigger: GGCAACAAAGTACCTGCGTGCTGGGTGAGAAGACCACGTGGAAAACAGTACACTGTGTCTGTAGGAATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp TGTCTGTTGACTGCTTGCCAGCCTTACTCCAGACACTaGAATAGTGTTGTGTGTCTTCTGGGTCAATGCCGT +
Preference number: 6 (lower is better)
Translates to: CLLTACQPYSRH*NSVVCLLGQCR
Trigger: ACGGCATTGACCCAGAAGACACACAACACTATTCCAGTGTCTGGAGTAAGGCTGGCAAGCAGTCAACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp TATGGACAAATAAGGTCCATTCCTCCTGGTGATTGCTaGCCCTGCCCAGTCAAACATCACTTCATGGCCCGT +
Preference number: 6 (lower is better)
Translates to: YGQIRSIPPGDC*PCPVKHHFMAR
Trigger: ACGGGCCATGAAGTGATGTTTGACTGGGCAGGGCAAGCAATCACCAGGAGGAATGGACCTTATTTGTCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp TTTCCACGTGGTCTTCTCACCCAGCACGCAGGTACTTaGTTGCCAATCACTCTGGATCCCATACATGTCCAA +
Preference number: 6 (lower is better)
Translates to: FPRGLLTQHAGT*LPITLDPIHVQ
Trigger: TTGGACATGTATGGGATCCAGAGTGATTGGCAACAAAGTACCTGCGTGCTGGGTGAGAAGACCACGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp AAGCAGCAGGACAGCCTCTGGAGCCTGTTGAATGGTTaGGGGACAATTTCCGTGAAAATGGAGATCCACATG +
Preference number: 6 (lower is better)
Translates to: KQQDSLWSLLNG*GTISVKMEIHM
Trigger: CATGTGGATCTCCATTTTCACGGAAATTGTCCCCAAACCATTCAACAGGCTCCAGAGGCTGTCCTGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp TCAGCCAGCGAGAAGGAGTACACAGAAAGGCTAGAGTaGACAACCCCTAAGGGAGAGACTTCGAATACAACC +
Preference number: 6 (lower is better)
Translates to: SASEKEYTERLE*TTPKGETSNTT
Trigger: GGTTGTATTCGAAGTCTCTCCCTTAGGGGTTGTCAACTCTAGCCTTTCTGTGTACTCCTTCTCGCTGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp GTGTACTGTTTTCCACGTGGTCTTCTCACCCAGCACGCAGGTACTTaGTTGCCAATCACTCTGGATCCCATACATGTCCAAACAGTGAAC +
Preference number: 6 (lower is better)
Translates to: VYCFPRGLLTQHAGT*LPITLDPIHVQTVN
Trigger: GTTCACTGTTTGGACATGTATGGGATCCAGAGTGATTGGCAACAAAGTACCTGCGTGCTGGGTGAGAAGACCACGTGGAAAACAGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp ATTCTTCTCCGGCTGCCCATAGAGCATGTCGACGAAGAAGTTGGATaGGTCTTTGTCTCTAGATCGGGTGGTGAGAAAGTCAAACCCAGA +
Preference number: 6 (lower is better)
Translates to: ILLRLPIEHVDEEVG*VFVSRSGGEKVKPR
Trigger: TCTGGGTTTGACTTTCTCACCACCCGATCTAGAGACAAAGACCAATCCAACTTCTTCGTCGACATGCTCTATGGGCAGCCGGAGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp TTGACGAGGTGCTCCAGGAGACGGGCTCTGTCATCTTaGAGTTCCTGCTCCCCTTTTATGTTATTCAAGACA +
Preference number: 6 (lower is better)
Translates to: LTRCSRRRALSS*SSCSPFMLFKT
Trigger: TGTCTTGAATAACATAAAAGGGGAGCAGGAACTTCAAGATGACAGAGCCCGTCTCCTGGAGCACCTCGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp AAGGCCTCAAACAACACTGTCACATTTGTGACAATGTaGATGAGTAGCTCCCCAGTCCACCTGCTGTCTACC +
Preference number: 6 (lower is better)
Translates to: KASNNTVTFVTM*MSSSPVHLLST
Trigger: GGTAGACAGCAGGTGGACTGGGGAGCTACTCATTCACATTGTCACAAATGTGACAGTGTTGTTTGAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp AGAGGTTCTTACAGTACTTGGGCTTGTAGCTCCTGGTaGCTGACCTCAGGAGAATATTGCATGGTTGTACGA +
Preference number: 6 (lower is better)
Translates to: RGSYSTWACSSW*LTSGEYCMVVR
Trigger: TCGTACAACCATGCAATATTCTCCTGAGGTCAGGCACCAGGAGCTACAAGCCCAAGTACTGTAAGAACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp AGACACTGGAATAGTGTTGTGTGTCTTCTGGGTCAATaGCGTACTGTGGGTGACAATGGATTTCCCCTGCAA +
Preference number: 6 (lower is better)
Translates to: RHWNSVVCLLGQ*RTVGDNGFPLQ
Trigger: TTGCAGGGGAAATCCATTGTCACCCACAGTACGGCATTGACCCAGAAGACACACAACACTATTCCAGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp CAGGACAGACCTTCCTCTGACATCAGGGGGTGCTTCTaGGGTGCCACTTTGTCTAGATTCATTTTAAGATTC +
Preference number: 6 (lower is better)
Translates to: QDRPSSDIRGCF*GATLSRFILRF
Trigger: GAATCTTAAAATGAATCTAGACAAAGTGGCACCCCAGAAGCACCCCCTGATGTCAGAGGAAGGTCTGTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp GAATACAACCGAAATGCTACACATCAGACTGGTGTCTaGATTCAGAGTGGTCAGTTCCACAATCACGGCCCA +
Preference number: 6 (lower is better)
Translates to: EYNRNATHQTGV*IQSGQFHNHGP
Trigger: TGGGCCGTGATTGTGGAACTGACCACTCTGAATCCAGACACCAGTCTGATGTGTAGCATTTCGGTTGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp TTTGACGAGGTGCTCCAGGAGACGGGCTCTGTCATCTaGAAGTTCCTGCTCCCCTTTTATGTTATTCAAGAC +
Preference number: 6 (lower is better)
Translates to: FDEVLQETGSVI*KFLLPFYVIQD
Trigger: GTCTTGAATAACATAAAAGGGGAGCAGGAACTTCAAGATGACAGAGCCCGTCTCCTGGAGCACCTCGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp ATGAAGAAGTCTGTCCTTTTCAGAGGCTCATCCGGGTaGGTGACAGAAAACGTTGCATCCAAAGTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: MKKSVLFRGSSG*VTENVASKVVS
Trigger: GGACACCACTTTGGATGCAACGTTTTCTGTCACCAACCCGGATGAGCCTCTGAAAAGGACAGACTTCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp CTGGGTCTTCTTTTGAACAGACTCAGTAGTATGCGGTaGGGAAGAGAAAGCTTTCGGAGGGACACCTTCACT +
Preference number: 6 (lower is better)
Translates to: LGLLLNRLSSMR*GRESFRRDTFT
Trigger: AGTGAAGGTGTCCCTCCGAAAGCTTTCTCTTCCCAACCGCATACTACTGAGTCTGTTCAAAAGAAGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp TACTGTTTTCCACGTGGTCTTCTCACCCAGCACGCAGGTACTTTGTaGCCAATCACTCTGGATCCCATACATGTCCAAACAGTGAACCAT +
Preference number: 6 (lower is better)
Translates to: YCFPRGLLTQHAGTL*PITLDPIHVQTVNH
Trigger: ATGGTTCACTGTTTGGACATGTATGGGATCCAGAGTGATTGGCAACAAAGTACCTGCGTGCTGGGTGAGAAGACCACGTGGAAAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp TCTACTTTGATTCGACTTAGGTACCAGCTAGGTGCTTCGCCCGAATaGTCATGCCACACTCGGATGGAATGGATATCCCCCAAGTCATTT +
Preference number: 6 (lower is better)
Translates to: STLIRLRYQLGASPE*SCHTRMEWISPKSF
Trigger: AAATGACTTGGGGGATATCCATTCCATCCGAGTGTGGCATGACAATTCGGGCGAAGCACCTAGCTGGTACCTAAGTCGAATCAAAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp ACATCAATCATGAAGAAGTCTGTCCTTTTCAGAGGCTCATCCGGGTaGGTGACAGAAAACGTTGCATCCAAAGTGGTGTCCACAGAGAGC +
Preference number: 6 (lower is better)
Translates to: TSIMKKSVLFRGSSG*VTENVASKVVSTES
Trigger: GCTCTCTGTGGACACCACTTTGGATGCAACGTTTTCTGTCACCAACCCGGATGAGCCTCTGAAAAGGACAGACTTCTTCATGATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp ACGGCCCATGTCAACTCATCCAGCCAATTCTTTCCCTCGAGTTCCTaGAGCCTCACTGTAGAATTAAACATCTGCTGTCCTGGAAAGAAG +
Preference number: 6 (lower is better)
Translates to: TAHVNSSSQFFPSSS*SLTVELNICCPGKK
Trigger: CTTCTTTCCAGGACAGCAGATGTTTAATTCTACAGTGAGGCTCAAGGAACTCGAGGGAAAGAATTGGCTGGATGAGTTGACATGGGCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp CTGTTGAAGTCAGCCAGCGAGAAGGAGTACACAGAAAGGCTAGAGTaGACAACCCCTAAGGGAGAGACTTCGAATACAACCGAAATGCTA +
Preference number: 6 (lower is better)
Translates to: LLKSASEKEYTERLE*TTPKGETSNTTEML
Trigger: TAGCATTTCGGTTGTATTCGAAGTCTCTCCCTTAGGGGTTGTCAACTCTAGCCTTTCTGTGTACTCCTTCTCGCTGGCTGACTTCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp GAAGTTGAGCAGGTTGTACACACTCCTTATGTAGGAAGCCCTCTCTaGCCTGATGATGTAGCCCTCGTCCACAACATAGGCACAAAAGAA +
Preference number: 6 (lower is better)
Translates to: EVEQVVHTPYVGSPL*PDDVALVHNIGTKE
Trigger: TTCTTTTGTGCCTATGTTGTGGACGAGGGCTACATCATCAGGCAAGAGAGGGCTTCCTACATAAGGAGTGTGTACAACCTGCTCAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp ACCAGGTACACTTCTGCTATGTCGGGTGTGATCTCTATGACCTTATaGTTATCTGCGACTCCAGTCATCCTGAACCCAACCACATCTACA +
Preference number: 6 (lower is better)
Translates to: TRYTSAMSGVISMTL*LSATPVILNPTTST
Trigger: TGTAGATGTGGTTGGGTTCAGGATGACTGGAGTCGCAGATAACAATAAGGTCATAGAGATCACACCCGACATAGCAGAAGTGTACCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp TCCACAGAGAGCCACCTCCGGCACACAAAAAGCCAAATGCGCTTGTaGAAGAGATTTTCTACTTTGATTCGACTTAGGTACCAGCTAGGT +
Preference number: 6 (lower is better)
Translates to: STESHLRHTKSQMRL*KRFSTLIRLRYQLG
Trigger: ACCTAGCTGGTACCTAAGTCGAATCAAAGTAGAAAATCTCTTCAACAAGCGCATTTGGCTTTTTGTGTGCCGGAGGTGGCTCTCTGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp GCTTTCTGGGTTAATTTGGTAATCACCATCACCGACTaGCCGATCTCATCCGCTGTGTTCATAGCAAACGTG +
Preference number: 6 (lower is better)
Translates to: AFWVNLVITITD*PISSAVFIANV
Trigger: CACGTTTGCTATGAACACAGCGGATGAGATCGGTCAGTCGGTGATGGTGATTACCAAATTAACCCAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp TGTGGTTCTTCCGAAGCTTATCCCTCACATCAATCATaGAGAAGTCTGTCCTTTTCAGAGGCTCATCCGGGT +
Preference number: 6 (lower is better)
Translates to: CGSSEAYPSHQS*RSLSFSEAHPG
Trigger: ACCCGGATGAGCCTCTGAAAAGGACAGACTTCTTCATGATTGATGTGAGGGATAAGCTTCGGAAGAACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp ATTGGACATTTGGGTGTCTGCTTTCTCATGCTTCTGTaGGGTTTCAAAGGCTTCCTTTTCCTCGGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: IGHLGVCFLMLL*GFKGFLFLGSR
Trigger: TCTGCTCCCGAGGAAAAGGAAGCCTTTGAAACCTCACAGAAGCATGAGAAAGCAGACACCCAAATGTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp ACAGAAGGAACAGAACGACGCAAAGAGCCACTCTATTaGCTTGGCATAGCCGTAAGTCACGCCGTAAAATAC +
Preference number: 6 (lower is better)
Translates to: TEGTERRKEPLY*LGIAVSHAVKY
Trigger: GTATTTTACGGCGTGACTTACGGCTATGCCAAGTCAATAGAGTGGCTCTTTGCGTCGTTCTGTTCCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp AGGAGAATATTGCATGGTTGTACGAGGAACACAGACTaGCAGAAGGAACAGAACGACGCAAAGAGCCACTCT +
Preference number: 6 (lower is better)
Translates to: RRILHGCTRNTD*QKEQNDAKSHS
Trigger: AGAGTGGCTCTTTGCGTCGTTCTGTTCCTTCTGTCAGTCTGTGTTCCTCGTACAACCATGCAATATTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp TTTTATGGACAAATAAGGTCCATTCCTCCTGGTGATTaGTTGCCCTGCCCAGTCAAACATCACTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: FYGQIRSIPPGD*LPCPVKHHFMA
Trigger: GGCCATGAAGTGATGTTTGACTGGGCAGGGCAAGCAATCACCAGGAGGAATGGACCTTATTTGTCCATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp ATAATGAAAAGCACGGCCAGGAAAGTCGCAGGGTTTTaGGTAAGGTTACTAATGATCGCTAGCCTCAGATCC +
Preference number: 6 (lower is better)
Translates to: IMKSTARKVAGF*VRLLMIASLRS
Trigger: GGATCTGAGGCTAGCGATCATTAGTAACCTTACCCAAAACCCTGCGACTTTCCTGGCCGTGCTTTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp CTTACTCCAGACACTGGAATAGTGTTGTGTGTCTTCTaGGTCAATGCCGTACTGTGGGTGACAATGGATTTC +
Preference number: 6 (lower is better)
Translates to: LTPDTGIVLCVF*VNAVLWVTMDF
Trigger: GAAATCCATTGTCACCCACAGTACGGCATTGACCCAGAAGACACACAACACTATTCCAGTGTCTGGAGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp CTGTGTTCTGAAAGGCTGACACGCAGTAGGAGAAGATaGTTTGGGTGGCGTGAATCATATTGCTGTAATTCC +
Preference number: 6 (lower is better)
Translates to: LCSERLTRSRRR*FGWRESYCCNS
Trigger: GGAATTACAGCAATATGATTCACGCCACCCAAACCATCTTCTCCTACTGCGTGTCAGCCTTTCAGAACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp ACTTCTGCTATGTCGGGTGTGATCTCTATGACCTTATaGTTATCTGCGACTCCAGTCATCCTGAACCCAACC +
Preference number: 6 (lower is better)
Translates to: TSAMSGVISMTL*LSATPVILNPT
Trigger: GGTTGGGTTCAGGATGACTGGAGTCGCAGATAACAATAAGGTCATAGAGATCACACCCGACATAGCAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp TTGACTGAACAGGTTGGGTCAAACAGGCCACTCCACTaGACAATGGGAGGGATGTCATTAGGAACAAGGAAA +
Preference number: 6 (lower is better)
Translates to: LTEQVGSNRPLH*TMGGMSLGTRK
Trigger: TTTCCTTGTTCCTAATGACATCCCTCCCATTGTCAAGTGGAGTGGCCTGTTTGACCCAACCTGTTCAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp GACAGAAGGAACAGAACGACGCAAAGAGCCACTCTATaGACTTGGCATAGCCGTAAGTCACGCCGTAAAATA +
Preference number: 6 (lower is better)
Translates to: DRRNRTTQRATL*TWHSRKSRRKI
Trigger: TATTTTACGGCGTGACTTACGGCTATGCCAAGTCAATAGAGTGGCTCTTTGCGTCGTTCTGTTCCTTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp TTCTCCACATACATGTTAAAGTTACTGGTCCTCAGAGCAGTGGTCTaGCTCCCCGGAACCTTGTTAGCCAGTATTGTGTCTGATAGTGAT +
Preference number: 6 (lower is better)
Translates to: FSTYMLKLLVLRAVV*LPGTLLASIVSDSD
Trigger: ATCACTATCAGACACAATACTGGCTAACAAGGTTCCGGGGAGCAAGACCACTGCTCTGAGGACCAGTAACTTTAACATGTATGTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp CGGCACACAAAAAGCCAAATGCGCTTGTTGAAGAGATTTTCTACTTaGATTCGACTTAGGTACCAGCTAGGTGCTTCGCCCGAATTGTCA +
Preference number: 6 (lower is better)
Translates to: RHTKSQMRLLKRFST*IRLRYQLGASPELS
Trigger: TGACAATTCGGGCGAAGCACCTAGCTGGTACCTAAGTCGAATCAAAGTAGAAAATCTCTTCAACAAGCGCATTTGGCTTTTTGTGTGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp TCAGTGAATCCTGCTCTGGGTGGCAGACAGCCTGGTTaGTCACTAATACATAGTTGCCACTATAGTATCTTG +
Preference number: 6 (lower is better)
Translates to: SVNPALGGRQPG*SLIHSCHYSIL
Trigger: CAAGATACTATAGTGGCAACTATGTATTAGTGATCAACCAGGCTGTCTGCCACCCAGAGCAGGATTCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp TGCGTTCAGTGTCGCACGGAGGCAGTTTGGACAGAGTaGATCATTTCTGAAGGCCTTAAAAACATTCCAGTT +
Preference number: 6 (lower is better)
Translates to: CVQCRTEAVWTE*IISEGLKNIPV
Trigger: AACTGGAATGTTTTTAAGGCCTTCAGAAATGATTCACTCTGTCCAAACTGCCTCCGTGCGACACTGAACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp AACGCGATGCCTGCAGGACCATGGATATGTTATACTTaGATGAAAATCTGCGCTGAGCTATGCTTCGAAGCA +
Preference number: 6 (lower is better)
Translates to: NAMPAGPWICYT*MKICAELCFEA
Trigger: TGCTTCGAAGCATAGCTCAGCGCAGATTTTCATTCAAGTATAACATATCCATGGTCCTGCAGGCATCGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp TATGTCGGGTGTGATCTCTATGACCTTATTGTTATCTaGGACTCCAGTCATCCTGAACCCAACCACATCTAC +
Preference number: 6 (lower is better)
Translates to: YVGCDLYDLIVI*DSSHPEPNHIY
Trigger: GTAGATGTGGTTGGGTTCAGGATGACTGGAGTCGCAGATAACAATAAGGTCATAGAGATCACACCCGACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp CGAAGGGGTCAGATCTTTTCTGACCAGGTACACTTCTaGTATGTCGGGTGTGATCTCTATGACCTTATTGTT +
Preference number: 6 (lower is better)
Translates to: RRGQIFSDQVHF*YVGCDLYDLIV
Trigger: AACAATAAGGTCATAGAGATCACACCCGACATAGCAGAAGTGTACCTGGTCAGAAAAGATCTGACCCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp TATCACATCCCTGTGCAAGGCCCAGAAAGCCAGAATTaGATACAAGATCATAATGAAAAGCACGGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: YHIPVQGPESQN*IQDHNEKHGQE
Trigger: TTCCTGGCCGTGCTTTTCATTATGATCTTGTATGCAATTCTGGCTTTCTGGGCCTTGCACAGGGATGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp GTTGGGAAGAGAAAGCTTTCGGAGGGACACCTTCACTaGCTTCTTGGTTATTGTTACTGCTGTTCTTATTGG +
Preference number: 6 (lower is better)
Translates to: VGKRKLSEGHLH*LLGYCYCCSYW
Trigger: CCAATAAGAACAGCAGTAACAATAACCAAGAAGCCAGTGAAGGTGTCCCTCCGAAAGCTTTCTCTTCCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp GAGAGCCACCTCCGGCACACAAAAAGCCAAATGCGCTaGTTGAAGAGATTTTCTACTTTGATTCGACTTAGG +
Preference number: 6 (lower is better)
Translates to: ESHLRHTKSQMR*LKRFSTLIRLR
Trigger: CCTAAGTCGAATCAAAGTAGAAAATCTCTTCAACAAGCGCATTTGGCTTTTTGTGTGCCGGAGGTGGCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp GTCAACTCATCCAGCCAATTCTTTCCCTCGAGTTCCTaGAGCCTCACTGTAGAATTAAACATCTGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: VNSSSQFFPSSS*SLTVELNICCP
Trigger: AGGACAGCAGATGTTTAATTCTACAGTGAGGCTCAAGGAACTCGAGGGAAAGAATTGGCTGGATGAGTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp TTAGAGACAAAATGGACCAGCTATACAAATCCTGGCGGCCACAACTaGGGCAGTTCAGAAACAGAGAAAATCTATCTGACACACCTAACG +
Preference number: 6 (lower is better)
Translates to: LETKWTSYTNPGGHN*GSSETEKIYLTHLT
Trigger: CGTTAGGTGTGTCAGATAGATTTTCTCTGTTTCTGAACTGCCCAAGTTGTGGCCGCCAGGATTTGTATAGCTGGTCCATTTTGTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp TTAAAGTTACTGGTCCTCAGAGCAGTGGTCTTGCTCCCCGGAACCTaGTTAGCCAGTATTGTGTCTGATAGTGATTCGACTACAAACAAA +
Preference number: 6 (lower is better)
Translates to: LKLLVLRAVVLLPGT*LASIVSDSDSTTNK
Trigger: TTTGTTTGTAGTCGAATCACTATCAGACACAATACTGGCTAACAAGGTTCCGGGGAGCAAGACCACTGCTCTGAGGACCAGTAACTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp GAAGAGAAAGCTTTCGGAGGGACACCTTCACTGGCTTCTTGGTTATaGTTACTGCTGTTCTTATTGGACATTTGGGTGTCTGCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: EEKAFGGTPSLASWL*LLLFLLDIWVSAFS
Trigger: TGAGAAAGCAGACACCCAAATGTCCAATAAGAACAGCAGTAACAATAACCAAGAAGCCAGTGAAGGTGTCCCTCCGAAAGCTTTCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp AAGCTTTTATGGACAAATAAGGTCCATTCCTCCTGGTaGTTGCTTGCCCTGCCCAGTCAAACATCACTTCAT +
Preference number: 6 (lower is better)
Translates to: KLLWTNKVHSSW*LLALPSQTSLH
Trigger: ATGAAGTGATGTTTGACTGGGCAGGGCAAGCAATCACCAGGAGGAATGGACCTTATTTGTCCATAAAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp AAACTGGTTATAGTAGAAGCTGTCGTTGTGGCGCAGTaGGAAAATGAGCAACAGGAGAAGGGTCAGGAATAT +
Preference number: 6 (lower is better)
Translates to: KLVIVEAVVVAQ*ENEQQEKGQEY
Trigger: ATATTCCTGACCCTTCTCCTGTTGCTCATTTTCTCACTGCGCCACAACGACAGCTTCTACTATAACCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp GAGCCAGGCGCACATTATAGAAGAACCTGGAATATCTaGGTGTCTTCAGTATGGTCAGAAACAACAGGAAAG +
Preference number: 6 (lower is better)
Translates to: EPGAHYRRTWNI*VSSVWSETTGK
Trigger: CTTTCCTGTTGTTTCTGACCATACTGAAGACACTCAGATATTCCAGGTTCTTCTATAATGTGCGCCTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp ACGCTCTCGATGCCTATCAGCATTGACCTGATAATGTaGATGTGTCTGGACTCAATTTTCTCCTTTTGGTTC +
Preference number: 6 (lower is better)
Translates to: TLSMPISIDLIM*MCLDSIFSFWF
Trigger: GAACCAAAAGGAGAAAATTGAGTCCAGACACATGCACATTATCAGGTCAATGCTGATAGGCATCGAGAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp CTGTTCTTATTGGACATTTGGGTGTCTGCTTTCTCATaGTTCTGTGAGGTTTCAAAGGCTTCCTTTTCCTCG +
Preference number: 6 (lower is better)
Translates to: LFLLDIWVSAFS*FCEVSKASFSS
Trigger: CGAGGAAAAGGAAGCCTTTGAAACCTCACAGAAGCATGAGAAAGCAGACACCCAAATGTCCAATAAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp GAGAAAGCTTTCGGAGGGACACCTTCACTGGCTTCTTaGTTATTGTTACTGCTGTTCTTATTGGACATTTGG +
Preference number: 6 (lower is better)
Translates to: EKAFGGTPSLAS*LLLLLFLLDIW
Trigger: CCAAATGTCCAATAAGAACAGCAGTAACAATAACCAAGAAGCCAGTGAAGGTGTCCCTCCGAAAGCTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp AAAAGCCAAATGCGCTTGTTGAAGAGATTTTCTACTTaGATTCGACTTAGGTACCAGCTAGGTGCTTCGCCC +
Preference number: 6 (lower is better)
Translates to: KSQMRLLKRFST*IRLRYQLGASP
Trigger: GGGCGAAGCACCTAGCTGGTACCTAAGTCGAATCAAAGTAGAAAATCTCTTCAACAAGCGCATTTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp AATTTAGTAACCATGGAAATCCCACTAGCTGGATTTATCTTGCATTaGCCAACTCGAGGGCCATGGTTAATGACAACGGGATGTCTCAAG +
Preference number: 6 (lower is better)
Translates to: NLVTMEIPLAGFILH*PTRGPWLMTTGCLK
Trigger: CTTGAGACATCCCGTTGTCATTAACCATGGCCCTCGAGTTGGCAAATGCAAGATAAATCCAGCTAGTGGGATTTCCATGGTTACTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 90 bp ACAGCAAATTTAGTAACCATGGAAATCCCACTAGCTGGATTTATCTaGCATTTGCCAACTCGAGGGCCATGGTTAATGACAACGGGATGT +
Preference number: 6 (lower is better)
Translates to: TANLVTMEIPLAGFI*HLPTRGPWLMTTGC
Trigger: ACATCCCGTTGTCATTAACCATGGCCCTCGAGTTGGCAAATGCAAGATAAATCCAGCTAGTGGGATTTCCATGGTTACTAAATTTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS GCA 72 bp AGCTTGTTAGTGGGCTTCAGGACAAAACGCGATGCCTaGAGGACCATGGATATGTTATACTTGAATGAAAAT +
Preference number: 6 (lower is better)
Translates to: SLLVGFRTKRDA*RTMDMLYLNEN
Trigger: ATTTTCATTCAAGTATAACATATCCATGGTCCTGCAGGCATCGCGTTTTGTCCTGAAGCCCACTAACAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp TCAGAAACAGAGAAAATCTATCTGACACACCTAACGTaGGGCCACAATTTTCAATGCAGGAAATGTGTGCCT +
Preference number: 6 (lower is better)
Translates to: SETEKIYLTHLT*GHNFQCRKCVP
Trigger: AGGCACACATTTCCTGCATTGAAAATTGTGGCCCCACGTTAGGTGTGTCAGATAGATTTTCTCTGTTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp AACAGCAAATTTAGTAACCATGGAAATCCCACTAGCTaGATTTATCTTGCATTTGCCAACTCGAGGGCCATG +
Preference number: 6 (lower is better)
Translates to: NSKFSNHGNPTS*IYLAFANSRAM
Trigger: CATGGCCCTCGAGTTGGCAAATGCAAGATAAATCCAGCTAGTGGGATTTCCATGGTTACTAAATTTGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp CTTGAGCCTCACTGTAGAATTAAACATCTGCTGTCCTaGAAAGAAGTAGAACACATACCCTCCAGATCCATA +
Preference number: 6 (lower is better)
Translates to: LEPHCRIKHLLS*KEVEHIPSRSI
Trigger: TATGGATCTGGAGGGTATGTGTTCTACTTCTTTCCAGGACAGCAGATGTTTAATTCTACAGTGAGGCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp TTAGTAACCATGGAAATCCCACTAGCTGGATTTATCTaGCATTTGCCAACTCGAGGGCCATGGTTAATGACA +
Preference number: 6 (lower is better)
Translates to: LVTMEIPLAGFI*HLPTRGPWLMT
Trigger: TGTCATTAACCATGGCCCTCGAGTTGGCAAATGCAAGATAAATCCAGCTAGTGGGATTTCCATGGTTACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp ACCATGGATATGTTATACTTGAATGAAAATCTGCGCTaGGCTATGCTTCGAAGCAGGGATGATGACAGACAA +
Preference number: 6 (lower is better)
Translates to: TMDMLYLNENLR*AMLRSRDDDRQ
Trigger: TTGTCTGTCATCATCCCTGCTTCGAAGCATAGCTCAGCGCAGATTTTCATTCAAGTATAACATATCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp TGCCAATCACTCTGGATCCCATACATGTCCAAACAGTaGACCATAAAGAGAGCAATTCTCACTAGCTTGTTA +
Preference number: 6 (lower is better)
Translates to: CQSLWIPYMSKQ*TIKRAILTSLL
Trigger: TAACAAGCTAGTGAGAATTGCTCTCTTTATGGTTCACTGTTTGGACATGTATGGGATCCAGAGTGATTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS TCA 72 bp ATAGCCGTAAGTCACGCCGTAAAATACAATAAAGAATaGCGATATACCGGAAGTGGCAAACACCAAAAACCA +
Preference number: 6 (lower is better)
Translates to: IAVSHAVKYNKE*RYTGSGKHQKP
Trigger: TGGTTTTTGGTGTTTGCCACTTCCGGTATATCGTCATTCTTTATTGTATTTTACGGCGTGACTTACGGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CCA 72 bp TCTTGGTTATTGTTACTGCTGTTCTTATTGGACATTTaGGTGTCTGCTTTCTCATGCTTCTGTGAGGTTTCA +
Preference number: 6 (lower is better)
Translates to: SWLLLLLFLLDI*VSAFSCFCEVS
Trigger: TGAAACCTCACAGAAGCATGAGAAAGCAGACACCCAAATGTCCAATAAGAACAGCAGTAACAATAACCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6
CDS CAA 72 bp GTATCAAAAGGATCATTATCAGTCAGTATTACCACATaGTCCCGAAAATACAGATCTATCACATCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: VSKGSLSVSITT*SRKYRSITSLC
Trigger: GCACAGGGATGTGATAGATCTGTATTTTCGGGACAATGTGGTAATACTGACTGATAATGATCCTTTTGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064370.6