Pregenerated sensors for PKDCC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024247Ensembl transcript IDs: ENSMUST00000170758.2, ENSMUST00000170794.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCCAGGAGGGGGAGGAGCCTGGCCTCCAGGAGGGGGAGGAGCCTaGCCTCCAGGAGTGGGAGGAGCCTGGCTGCGGCTGCTCCCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: TPGGGGAWPPGGGGA*PPGVGGAWLRLLPG Trigger: GCCAGGGAGCAGCCGCAGCCAGGCTCCTCCCACTCCTGGAGGCCAGGCTCCTCCCCCTCCTGGAGGCCAGGCTCCTCCCCCTCCTGGAGT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR CCA 90 bp | AGCCTGGCCTCCAGGAGTGGGAGGAGCCTGGCTGCGGCTGCTCCCTaGCTTTCACTGAAAGCAAATGAGGCAGAGAGGCCCCGACCCTAC | + |
|
Preference number: 1 (lower is better) Translates to: SLASRSGRSLAAAAP*LSLKANEAERPRPY Trigger: GTAGGGTCGGGGCCTCTCTGCCTCATTTGCTTTCAGTGAAAGCCAGGGAGCAGCCGCAGCCAGGCTCCTCCCACTCCTGGAGGCCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR TCA 90 bp | TCACATCTCCGCATCCCGCGCTCTCCATTTGGAGCGGAGCTGAGCTaGGAGAGCACTCTGAGACTGGTTGTCCCCAGGCAGCTCCTGCCC | + |
|
Preference number: 1 (lower is better) Translates to: SHLRIPRSPFGAELS*ESTLRLVVPRQLLP Trigger: GGGCAGGAGCTGCCTGGGGACAACCAGTCTCAGAGTGCTCTCTCAGCTCAGCTCCGCTCCAAATGGAGAGCGCGGGATGCGGAGATGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR GCA 90 bp | TTGCTCTGGGAGCTAGCTTTTGTCTGCAGGGGTTCCCAGGTGGGATaGAAGTCACGCCTGCAGCAGGCAAGCCCAGCTGGTCAGCTGAGC | + |
|
Preference number: 1 (lower is better) Translates to: LLWELAFVCRGSQVG*KSRLQQASPAGQLS Trigger: GCTCAGCTGACCAGCTGGGCTTGCCTGCTGCAGGCGTGACTTGCATCCCACCTGGGAACCCCTGCAGACAAAAGCTAGCTCCCAGAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR CCA 90 bp | CCCAGTGCTGGTTCACTCACATCTCCGCATCCCGCGCTCTCCATTTaGAGCGGAGCTGAGCTGAGAGAGCACTCTGAGACTGGTTGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: PSAGSLTSPHPALSI*SGAELREHSETGCP Trigger: GGGACAACCAGTCTCAGAGTGCTCTCTCAGCTCAGCTCCGCTCCAAATGGAGAGCGCGGGATGCGGAGATGTGAGTGAACCAGCACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR GCA 90 bp | CTCAAATGCAATCTGCTCCTCCACTCTAGTCTTGGCTCATATGGATaGGAGCACTGCTGCCCACGGCCTCGGGGCTGGCCTAGGAGCAAC | + |
|
Preference number: 1 (lower is better) Translates to: LKCNLLLHSSLGSYG*EHCCPRPRGWPRSN Trigger: GTTGCTCCTAGGCCAGCCCCGAGGCCGTGGGCAGCAGTGCTCGCATCCATATGAGCCAAGACTAGAGTGGAGGAGCAGATTGCATTTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR CCA 90 bp | CCCAGGCAGCTCCTGCCCACGGTGGCTTATGCAGCAGCAGTGTTCTaGCTACATTCTCAAAGCATGAATGCAGTAATGGGCTGCCCACGG | + |
|
Preference number: 1 (lower is better) Translates to: PRQLLPTVAYAAAVF*LHSQSMNAVMGCPR Trigger: CCGTGGGCAGCCCATTACTGCATTCATGCTTTGAGAATGTAGCCAGAACACTGCTGCTGCATAAGCCACCGTGGGCAGGAGCTGCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR GCA 90 bp | TCTGAGACTGGTTGTCCCCAGGCAGCTCCTGCCCACGGTGGCTTATaGAGCAGCAGTGTTCTGGCTACATTCTCAAAGCATGAATGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: SETGCPQAAPAHGGL*SSSVLATFSKHECS Trigger: ACTGCATTCATGCTTTGAGAATGTAGCCAGAACACTGCTGCTGCATAAGCCACCGTGGGCAGGAGCTGCCTGGGGACAACCAGTCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR GCA 90 bp | GGCTTATGCAGCAGCAGTGTTCTGGCTACATTCTCAAAGCATGAATaGAGTAATGGGCTGCCCACGGGACTGTCCCAGTTAAGACCAGCC | + |
|
Preference number: 1 (lower is better) Translates to: GLCSSSVLATFSKHE*SNGLPTGLSQLRPA Trigger: GGCTGGTCTTAACTGGGACAGTCCCGTGGGCAGCCCATTACTGCATTCATGCTTTGAGAATGTAGCCAGAACACTGCTGCTGCATAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR TCA 90 bp | GCCTACAGCTCCAGAGAGGCAATCGGGTTCCAACCAGTCTGGGACTaGAGCTGGCAAACTCACATTTTAACATTTTTGCATATTGCACGT | + |
|
Preference number: 1 (lower is better) Translates to: AYSSREAIGFQPVWD*SWQTHILTFLHIAR Trigger: ACGTGCAATATGCAAAAATGTTAAAATGTGAGTTTGCCAGCTTCAGTCCCAGACTGGTTGGAACCCGATTGCCTCTCTGGAGCTGTAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCTAGGGAGAGGCCCGAGAGCCTTCTTCCCAGTGCTGGTTCACTCACATCTGCAGGCAAGCCCAGCTaGTCAGCTGAGCCCACAACC | + |
|
Preference number: 2 (lower is better) Translates to: TSRERPESLLPSAGSLTSAGKPS*SAEPTT Trigger: GGTTGTGGGCTCAGCTGACCAGCTGGGCTTGCCTGC...AGATGTGAGTGAACCAGCACTGGGAAGAAGGCTCTCGGGCCTCTCCCTAGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGTCACATCAGTTGCTCTGGGAGCTAGCTTTTGTCTGCAGGGGTTCCCAGGTGGATGCAAGTCACGCCTaGAGCAGGCAAGCCCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WSHQLLWELAFVCRGSQVDASHA*SRQAQL Trigger: CAGCTGGGCTTGCCTGCTGCAGGCGTGACTTGCATC...CACCTGGGAACCCCTGCAGACAAAAGCTAGCTCCCAGAGCAACTGATGTGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAATTTAATGAACGAGAAGTATAAAAGCTTCTGGGTACGCAAACTCCAGGAGGGTTCCCAGGTGGGATaGAAGTCACGCCTGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: NNLMNEKYKSFWVRKLQEGSQVG*KSRLQQ Trigger: CTGCTGCAGGCGTGACTTGCATCCCACCTGGGAACC...CTCCTGGAGTTTGCGTACCCAGAAGCTTTTATACTTCTCGTTCATTAAATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR CCA 72 bp | GGGGGAGGAGCCTGGCCTCCAGGAGGGGGAGGAGCCTaGCCTCCAGGAGTGGGAGGAGCCTGGCTGCGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GGGAWPPGGGGA*PPGVGGAWLRL Trigger: CAGCCGCAGCCAGGCTCCTCCCACTCCTGGAGGCCAGGCTCCTCCCCCTCCTGGAGGCCAGGCTCCTCCCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR TCA 72 bp | CGCATCCCGCGCTCTCCATTTGGAGCGGAGCTGAGCTaGGAGAGCACTCTGAGACTGGTTGTCCCCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RIPRSPFGAELS*ESTLRLVVPRQ Trigger: CTGCCTGGGGACAACCAGTCTCAGAGTGCTCTCTCAGCTCAGCTCCGCTCCAAATGGAGAGCGCGGGATGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR GCA 72 bp | CACTCTAGTCTTGGCTCATATGGATGCGAGCACTGCTaGCCACGGCCTCGGGGCTGGCCTAGGAGCAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: HSSLGSYGCEHC*PRPRGWPRSNL Trigger: GAGGTTGCTCCTAGGCCAGCCCCGAGGCCGTGGGCAGCAGTGCTCGCATCCATATGAGCCAAGACTAGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR GCA 72 bp | CTCCACTCTAGTCTTGGCTCATATGGATGCGAGCACTaGTGCCCACGGCCTCGGGGCTGGCCTAGGAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LHSSLGSYGCEH*CPRPRGWPRSN Trigger: GTTGCTCCTAGGCCAGCCCCGAGGCCGTGGGCAGCAGTGCTCGCATCCATATGAGCCAAGACTAGAGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR CCA 72 bp | GGTTCACTCACATCTCCGCATCCCGCGCTCTCCATTTaGAGCGGAGCTGAGCTGAGAGAGCACTCTGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: GSLTSPHPALSI*SGAELREHSET Trigger: AGTCTCAGAGTGCTCTCTCAGCTCAGCTCCGCTCCAAATGGAGAGCGCGGGATGCGGAGATGTGAGTGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR GCA 72 bp | TGGTCACATCAGTTGCTCTGGGAGCTAGCTTTTGTCTaGAGGGGTTCCCAGGTGGGATGCAAGTCACGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WSHQLLWELAFV*RGSQVGCKSRL Trigger: CAGGCGTGACTTGCATCCCACCTGGGAACCCCTGCAGACAAAAGCTAGCTCCCAGAGCAACTGATGTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR GCA 72 bp | CCCTACCCCCACCCCAGTCCTGGCTCAAATGCAATCTaGTCCTCCACTCTAGTCTTGGCTCATATGGATGCG | + |
|
Preference number: 3 (lower is better) Translates to: PYPHPSPGSNAI*SSTLVLAHMDA Trigger: CGCATCCATATGAGCCAAGACTAGAGTGGAGGAGCAGATTGCATTTGAGCCAGGACTGGGGTGGGGGTAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR CCA 72 bp | CTCCTGCCCACGGTGGCTTATGCAGCAGCAGTGTTCTaGCTACATTCTCAAAGCATGAATGCAGTAATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLPTVAYAAAVF*LHSQSMNAVMG Trigger: GCCCATTACTGCATTCATGCTTTGAGAATGTAGCCAGAACACTGCTGCTGCATAAGCCACCGTGGGCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| 3UTR TCA 72 bp | TCCAGAGAGGCAATCGGGTTCCAACCAGTCTGGGACTaGAGCTGGCAAACTCACATTTTAACATTTTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SREAIGFQPVWD*SWQTHILTFLH Trigger: ATGCAAAAATGTTAAAATGTGAGTTTGCCAGCTTCAGTCCCAGACTGGTTGGAACCCGATTGCCTCTCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTAGGAGCAACCTCTAGGGAGAGGCCCGAGAGCCTTCTTCCCAGTGCTGGTCCCTCGCACCAGCCCTaGGCCGAGCAGGGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGATSRERPESLLPSAGPSHQP*AEQGRL Trigger: CAGCCTGCCCTGCTCGGCCCAGGGCTGGTGCGAGGG...ACCAGCACTGGGAAGAAGGCTCTCGGGCCTCTCCCTAGAGGTTGCTCCTAGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTTCCCAGGTGGGATGCAAGTCACGCCTGCAGCAGGCAAGCCCAGCTGGAGAGCTGCAGCACGTTaGGGTGCCGCAGCCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGFPGGMQVTPAAGKPSWRAAAR*GAAAAP Trigger: TGGAGCGGCTGCGGCACCCCAACGTGCTGCAGCTCT...CCAGCTGGGCTTGCCTGCTGCAGGCGTGACTTGCATCCCACCTGGGAACCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTAGGAGCAACCTCTAGGGAGAGGCCCGAGAGCCTTCTTCCCAGTGCTGGTGGGGAGTGGGCCAGGTaGTGGAGGAGGCGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGATSRERPESLLPSAGGEWAR*WRRRPR Trigger: CCTTGGCCGCCTCCTCCACCACCTGGCCCACTCCCC...ACCAGCACTGGGAAGAAGGCTCTCGGGCCTCTCCCTAGAGGTTGCTCCTAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTTCCCAGGTGGGATGCAAGTCACGCCTGCAGCAGGCAAGCCCAGCTGGCAGCTGCCCAGATCGTaGCCGCTGAAGTCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGFPGGMQVTPAAGKPSWQLPRS*PLKSTA Trigger: AGCAGTGGACTTCAGCGGCCACGATCTGGGCAGCTG...CCAGCTGGGCTTGCCTGCTGCAGGCGTGACTTGCATCCCACCTGGGAACCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGGTGGGATGCAAGTCACGCCTGCAGCAGGCAAGCCCAGCTGGTCAGCTGGCAGCACCATCTCTTTaGGCAGCTTGTGGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQVGCKSRLQQASPAGQLAAPSL*AACGPP Trigger: TGGCGGCCCACAAGCTGCTCAAAGAGATGGTGCTGC...CAGCTGACCAGCTGGGCTTGCCTGCTGCAGGCGTGACTTGCATCCCACCTGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR TCA 90 bp | GCCCGAGAGCCTTCTTCCCAGTGCTGGTTCACTCACATCTCCGCATCCCGCGCTCCGAGCAGGGCAGGCTaGAGTTCCTGGCTGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: AREPSSQCWFTHISASRAPSRAG*SSWLET Trigger: AGTTTCCAGCCAGGAACTTCAGCCTGCCCTGCTCGG...AGCGCGGGATGCGGAGATGTGAGTGAACCAGCACTGGGAAGAAGGCTCTCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGCACTCTGAGACTGGTTGTCCCCAGGCAGCTCCTGCCCACGGTGGCTTAAGCCTTAGTGTAGCCTaGGCCCACGTACTGCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: REHSETGCPQAAPAHGGLSLSVA*AHVLRA Trigger: GGCGCGCAGTACGTGGGCTCAGGCTACACTAAGGCT...TAAGCCACCGTGGGCAGGAGCTGCCTGGGGACAACCAGTCTCAGAGTGCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAGTCACGCCTGCAGCAGGCAAGCCCAGCTGGTCAGCTGAGCCCACAACCAAGTCGGCACTGCTGGTaGACGGTGTCTCTTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: CKSRLQQASPAGQLSPQPSRHCW*TVSLPR Trigger: GCGTGGAAGAGACACCGTGCACCAGCAGTGCCGACT...TGGTTGTGGGCTCAGCTGACCAGCTGGGCTTGCCTGCTGCAGGCGTGACTTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | CTACCCCCACCCCAGTCCTGGCTCAAATGCAATCTGCTCCTCCACTCTAGTCTTGCGCGCCAGACACGTTaGGGAGCGCGGCGCAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPPPQSWLKCNLLLHSSLARQTR*GARRSL Trigger: TAGGCTGCGCCGCGCTCCGCAACGTGTCTGGCGCGC...AAGACTAGAGTGGAGGAGCAGATTGCATTTGAGCCAGGACTGGGGTGGGGGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCTTTTGTCTGCAGGGGTTCCCAGGTGGGATGCAAGTCACGCCTGCAGCAGTGGCACTGTCCGGGATaGGCTGGTACTCAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAFVCRGSQVGCKSRLQQWHCPG*AGTQPC Trigger: GCAGGGCTGAGTACCAGCGCATCCCGGACAGTGCCA...CTGCTGCAGGCGTGACTTGCATCCCACCTGGGAACCCCTGCAGACAAAAGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCACATCAGTTGCTCTGGGAGCTAGCTTTTGTCTGCAGGGGTTCCCAGGTGTGCAGCACGTTGGGGTaGCGCAGCCGCTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSHQLLWELAFVCRGSQVCSTLG*RSRSSS Trigger: GCTGCTGGAGCGGCTGCGGCACCCCAACGTGCTGCA...CACCTGGGAACCCCTGCAGACAAAAGCTAGCTCCCAGAGCAACTGATGTGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTGGCTCATATGGATGCGAGCACTGCTGCCCACGGCCTCGGGGCTGGCCTAACAAAGGCACGACACTaGGCATGGCTCTCACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VLAHMDASTAAHGLGAGLTKARH*AWLSQT Trigger: TGTCTGTGAGAGCCATGCTCAGTGTCGTGCCTTTGT...TAGGCCAGCCCCGAGGCCGTGGGCAGCAGTGCTCGCATCCATATGAGCCAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTAGGAGCAACCTCTAGGGAGAGGCCCGAGAGCCTTCTTCCCAGTGCTGGTAGGTGGTCTGGTTGGTaGCCACAAAGGCACGACACT | + |
|
Preference number: 4 (lower is better) Translates to: GLGATSRERPESLLPSAGRWSGW*PQRHDT Trigger: AGTGTCGTGCCTTTGTGGTCACCAACCAGACCACCT...ACCAGCACTGGGAAGAAGGCTCTCGGGCCTCTCCCTAGAGGTTGCTCCTAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCACATCAGTTGCTCTGGGAGCTAGCTTTTGTCTGCAGGGGTTCCCAGGTGGGAAGTCAAGCAGGGTaGCCGAGCCCAGCGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WSHQLLWELAFVCRGSQVGSQAG*PSPAGS Trigger: ACTCCCCGCTGGGCTCGGTCACCCTGCTTGACTTCC...CACCTGGGAACCCCTGCAGACAAAAGCTAGCTCCCAGAGCAACTGATGTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCACATCAGTTGCTCTGGGAGCTAGCTTTTGTCTGCAGGGGTTCCCAGGTGGTGCGAAGAGCACGTTaGGGACGGAGCCCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WSHQLLWELAFVCRGSQVVRRAR*GRSPAG Trigger: TCCTGCTGGGCTCCGTCCTCAACGTGCTCTTCGCAC...CACCTGGGAACCCCTGCAGACAAAAGCTAGCTCCCAGAGCAACTGATGTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR TCA 90 bp | GCCCGAGAGCCTTCTTCCCAGTGCTGGTTCACTCACATCTCCGCATCCCGCGCTGTGGCAGGAGGTATGTaGAGAAGAACCTGTAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AREPSSQCWFTHISASRAVAGGM*RRTCRH Trigger: ATGCCTACAGGTTCTTCTTCACATACCTCCTGCCAC...AGCGCGGGATGCGGAGATGTGAGTGAACCAGCACTGGGAAGAAGGCTCTCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGCCCACGGTGGCTTATGCAGCAGCAGTGTTCTGGCTACATTCTCAAAGCAGCCGCTGAAGTCCACTaGTTTAAGCGCCACCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCPRWLMQQQCSGYILKAAAEVH*FKRHRG Trigger: GCCGCGGTGGCGCTTAAAGCAGTGGACTTCAGCGGC...TGCTTTGAGAATGTAGCCAGAACACTGCTGCTGCATAAGCCACCGTGGGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGTGTTCTGGCTACATTCTCAAAGCATGAATGCAGTAATGGGCTGCCCCCTGAGCCCACGTACTaGGCGCCAGACACGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSVLATFSKHECSNGLPPEPTY*APDTLR Trigger: CCGCAACGTGTCTGGCGCGCAGTACGTGGGCTCAGG...GGGCAGCCCATTACTGCATTCATGCTTTGAGAATGTAGCCAGAACACTGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGTTGCTCTGGGAGCTAGCTTTTGTCTGCAGGGGTTCCCAGGTGGGATGCCCTGTCCAGGTGGTCTaGTTGGTGACCACAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HQLLWELAFVCRGSQVGCPVQVV*LVTTKA Trigger: TGCCTTTGTGGTCACCAACCAGACCACCTGGACAGG...GCATCCCACCTGGGAACCCCTGCAGACAAAAGCTAGCTCCCAGAGCAACTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGCTCATATGGATGCGAGCACTGCTGCCCACGGCCTCGGGGCTGGCCTAGCATCAGGGACCACTTaGTTCCATCCAGTCTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLAHMDASTAAHGLGAGLASGTT*FHPVLK Trigger: TTTTAAGACTGGATGGAACCAAGTGGTCCCTGATGC...TAGGCCAGCCCCGAGGCCGTGGGCAGCAGTGCTCGCATCCATATGAGCCAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTGCCCACGGTGGCTTATGCAGCAGCAGTGTTCTGGCTACATTCTCAAATCCGTTTCTCATTCATaGCCTCGCACCAGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCPRWLMQQQCSGYILKSVSHS*PRTSPG Trigger: CCCAGGGCTGGTGCGAGGGCATGAATGAGAAACGGA...TTTGAGAATGTAGCCAGAACACTGCTGCTGCATAAGCCACCGTGGGCAGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTGCCCACGGTGGCTTATGCAGCAGCAGTGTTCTGGCTACATTCTCAAATCACATATGTGGTCTTaGCGGCATCAGGGACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSCPRWLMQQQCSGYILKSHMWS*RHQGPL Trigger: AAGTGGTCCCTGATGCCGGCAAGACCACATATGTGA...TTTGAGAATGTAGCCAGAACACTGCTGCTGCATAAGCCACCGTGGGCAGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | AACATTTTTGCATATTGCACGTTTTGTCCTGGTCACATCAGTTGCTCTGGGAGCAGGCTCCGAGCCCGGTaGGAAGAGCACGTTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NIFAYCTFCPGHISCSGSRLRAR*EEHVED Trigger: GTCCTCAACGTGCTCTTCGCACCGGGCTCGGAGCCT...GCTCCCAGAGCAACTGATGTGACCAGGACAAAACGTGCAATATGCAAAAATGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | TTGCATATTGCACGTTTTGTCCTGGTCACATCAGTTGCTCTGGGAGCTAGCTTTTCAGCGTGTCTGGGATaGCCTCACTGTCCTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHIARFVLVTSVALGASFSACLG*PHCPGS Trigger: GCTACCAGGACAGTGAGGGCATCCCAGACACGCTGA...AAAGCTAGCTCCCAGAGCAACTGATGTGACCAGGACAAAACGTGCAATATGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CCA 90 bp | TTGCATATTGCACGTTTTGTCCTGGTCACATCAGTTGCTCTGGGAGCTAGCTTTAGGCGGGGCACTGTGTaGCAGGAGGTATGTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHIARFVLVTSVALGASFRRGTV*QEVCEE Trigger: TTCTTCACATACCTCCTGCCACACAGTGCCCCGCCT...AAAGCTAGCTCCCAGAGCAACTGATGTGACCAGGACAAAACGTGCAATATGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CCA 90 bp | AACAATTTAATGAACGAGAAGTATAAAAGCTTCTGGGTACGCAAACTCCAGGAGAGCGCTGTCTCCAGCTaGGCCAGGGTCTCATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NNLMNEKYKSFWVRKLQESAVSS*ARVSST Trigger: GGTGGATGAGACCCTGGCCCAGCTGGAGACAGCGCT...CTCCTGGAGTTTGCGTACCCAGAAGCTTTTATACTTCTCGTTCATTAAATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CCA 90 bp | AACAATTTAATGAACGAGAAGTATAAAAGCTTCTGGGTACGCAAACTCCAGGAGGGGCCTTCACATATGTaGTCTTGCCGGCATCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NNLMNEKYKSFWVRKLQEGPSHM*SCRHQG Trigger: TCCCTGATGCCGGCAAGACCACATATGTGAAGGCCC...CTCCTGGAGTTTGCGTACCCAGAAGCTTTTATACTTCTCGTTCATTAAATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR GCA 90 bp | AACAATTTAATGAACGAGAAGTATAAAAGCTTCTGGGTACGCAAACTCCAGGAGTTCACTAGCACAAACTaGCGAGGGCGGAAGTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NNLMNEKYKSFWVRKLQEFTSTN*RGRKSS Trigger: GCTTGACTTCCGCCCTCGGCAGTTTGTGCTAGTGAA...CTCCTGGAGTTTGCGTACCCAGAAGCTTTTATACTTCTCGTTCATTAAATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS GCA 90 bp | CGAGGACCCCGGGGACTGGCCTGGCCGCGGAGGCTCCGAGCCCGGTaGGAAGAGCACGTTGAGGACGGAGCCCAGCAGGAAGGAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGPRGLAWPRRLRAR*EEHVEDGAQQEGGA Trigger: TGCGCCTCCTTCCTGCTGGGCTCCGTCCTCAACGTGCTCTTCGCACCGGGCTCGGAGCCTCCGCGGCCAGGCCAGTCCCCGGGGTCCTCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS TCA 90 bp | GGCGCCGCCGGGCAGGCGGACCCGGTACACAGCCTTAGTGTAGCCTaGGCCCACGTACTGCGCGCCAGACACGTTGCGGAGCGCGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAAGQADPVHSLSVA*AHVLRARHVAERGA Trigger: TGCGCCGCGCTCCGCAACGTGTCTGGCGCGCAGTACGTGGGCTCAGGCTACACTAAGGCTGTGTACCGGGTCCGCCTGCCCGGCGGCGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS CCA 90 bp | CAGCCCCTTCGCGCCCCGAACTCGCGCACGCAGCTGCCCAGATCGTaGCCGCTGAAGTCCACTGCTTTAAGCGCCACCGCGGCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QPLRAPNSRTQLPRS*PLKSTALSATAAPP Trigger: CGGCGGCGCCGCGGTGGCGCTTAAAGCAGTGGACTTCAGCGGCCACGATCTGGGCAGCTGCGTGCGCGAGTTCGGGGCGCGAAGGGGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS GCA 90 bp | GAACTCGCGCACGCAGCTGCCCAGATCGTGGCCGCTGAAGTCCACTaGTTTAAGCGCCACCGCGGCGCCGCCGGGCAGGCGGACCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ELAHAAAQIVAAEVH*FKRHRGAAGQADPV Trigger: TACCGGGTCCGCCTGCCCGGCGGCGCCGCGGTGGCGCTTAAAGCAGTGGACTTCAGCGGCCACGATCTGGGCAGCTGCGTGCGCGAGTTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCTAGGGAGAGGCCCGAGAGCCTTCTTCCCAGTGCTGGTTCACTCACATCTTGCGCGCCAGACACGTaGCGGAGCGCGGCGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TSRERPESLLPSAGSLTSCAPDT*RSAAQP Trigger: AGGCTGCGCCGCGCTCCGCAACGTGTCTGGCGCGCA...AGATGTGAGTGAACCAGCACTGGGAAGAAGGCTCTCGGGCCTCTCCCTAGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGTTCCCAGGTGGGATGCAAGTCACGCCTGCAGCAGGCAAGCCCAGCTGAGCAGCACCATCTCTTaGAGCAGCTTGTGGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGVPRWDASHACSRQAQLSSTIS*SSLWAA Trigger: GGCGGCCCACAAGCTGCTCAAAGAGATGGTGCTGCT...CAGCTGGGCTTGCCTGCTGCAGGCGTGACTTGCATCCCACCTGGGAACCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS TCA 90 bp | TCTCATTCATGCCCTCGCACCAGCCCTGGGCCGAGCAGGGCAGGCTaGAGTTCCTGGCTGGAAACTCTAGCGTGCAGTCGGCACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHSCPRTSPGPSRAG*SSWLETLACSRHCW Trigger: CCAGCAGTGCCGACTGCACGCTAGAGTTTCCAGCCAGGAACTTCAGCCTGCCCTGCTCGGCCCAGGGCTGGTGCGAGGGCATGAATGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGGTTCCCAGGTGGGATGCAAGTCACGCCTGCAGCAGGCAAGCCCAGCTGGGTCCAGGTGGTCTGGTaGGTGACCACAAAGGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: QGFPGGMQVTPAAGKPSWVQVVW*VTTKAR Trigger: TCGTGCCTTTGTGGTCACCAACCAGACCACCTGGAC...CCAGCTGGGCTTGCCTGCTGCAGGCGTGACTTGCATCCCACCTGGGAACCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS TCA 90 bp | AGCCGCCGTGGTGATAGGATGGCCAGCAGCGATAGTCCTCCTGTGTaGTGGCACTGTCCGGGATGCGCTGGTACTCAGCCCTGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRRGDRMASSDSPPV*WHCPGCAGTQPCCL Trigger: CAAGCAGCAGGGCTGAGTACCAGCGCATCCCGGACAGTGCCATCACACAGGAGGACTATCGCTGCTGGCCATCCTATCACCACGGCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS GCA 90 bp | TCATCCAGGTCTGTCACTTTCAGCTCCCCGTTCACTAGCACAAACTaGCGAGGGCGGAAGTCAAGCAGGGTGACCGAGCCCAGCGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSRSVTFSSPFTSTN*RGRKSSRVTEPSGE Trigger: CTCCCCGCTGGGCTCGGTCACCCTGCTTGACTTCCGCCCTCGGCAGTTTGTGCTAGTGAACGGGGAGCTGAAAGTGACAGACCTGGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS CCA 90 bp | AGCCAGGTTGAACACGGACAGGAGGCAGCCGCCGTGGTGATAGGATaGCCAGCAGCGATAGTCCTCCTGTGTGATGGCACTGTCCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SQVEHGQEAAAVVIG*PAAIVLLCDGTVRD Trigger: ATCCCGGACAGTGCCATCACACAGGAGGACTATCGCTGCTGGCCATCCTATCACCACGGCGGCTGCCTCCTGTCCGTGTTCAACCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS GCA 90 bp | ATGCGCTGGTACTCAGCCCTGCTGCTTGTAGAGTTCTGCAGGTACTaGCCACTTCGGAACAAGTGTAGCGCTGTCTCCAGCTGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MRWYSALLLVEFCRY*PLRNKCSAVSSWAR Trigger: CCTGGCCCAGCTGGAGACAGCGCTACACTTGTTCCGAAGTGGGCAGTACCTGCAGAACTCTACAAGCAGCAGGGCTGAGTACCAGCGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS CCA 90 bp | CTGAGGCAGATTCGGAATCGATCCTCCCAGGAAGTCTGCAACAGCTaGATCATCTCCACAGGGGCACCCAGCTCTGTGATGGTGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRQIRNRSSQEVCNS*IISTGAPSSVMVVS Trigger: GCTGACCACCATCACAGAGCTGGGTGCCCCTGTGGAGATGATCCAGCTGTTGCAGACTTCCTGGGAGGATCGATTCCGAATCTGCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTAGGAGCAACCTCTAGGGAGAGGCCCGAGAGCCTTCTTCCCAGTGCTGGTGGCATCAGGGACCACTaGGTTCCATCCAGTCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLGATSRERPESLLPSAGGIRDH*VPSSLK Trigger: TTTAAGACTGGATGGAACCAAGTGGTCCCTGATGCC...ACCAGCACTGGGAAGAAGGCTCTCGGGCCTCTCCCTAGAGGTTGCTCCTAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCTAGGGAGAGGCCCGAGAGCCTTCTTCCCAGTGCTGGTTCACTCACATCTTTCACATATGTGGTCTaGCCGGCATCAGGGACCACT | + |
|
Preference number: 5 (lower is better) Translates to: TSRERPESLLPSAGSLTSFTYVV*PASGTT Trigger: AGTGGTCCCTGATGCCGGCAAGACCACATATGTGAA...AGATGTGAGTGAACCAGCACTGGGAAGAAGGCTCTCGGGCCTCTCCCTAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGGCTACATTCTCAAAGCATGAATGCAGTAATGGGCTGCCCACGGGACTGTATAGCCTCAGCCAGGTaGAACACGGACAGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FWLHSQSMNAVMGCPRDCIASAR*NTDRRQ Trigger: CTGCCTCCTGTCCGTGTTCAACCTGGCTGAGGCTAT...ACAGTCCCGTGGGCAGCCCATTACTGCATTCATGCTTTGAGAATGTAGCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS-3UTR CAA 90 bp | AACATTTTTGCATATTGCACGTTTTGTCCTGGTCACATCAGTTGCTCTGGGAGCGGTGCGAAGAGCACGTaGAGGACGGAGCCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NIFAYCTFCPGHISCSGSGAKST*RTEPSR Trigger: CCTGCTGGGCTCCGTCCTCAACGTGCTCTTCGCACC...GCTCCCAGAGCAACTGATGTGACCAGGACAAAACGTGCAATATGCAAAAATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS GCA 72 bp | TGTAGCCTGAGCCCACGTACTGCGCGCCAGACACGTTaGGGAGCGCGGCGCAGCCTAGGCGCGGGCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CSLSPRTARQTR*GARRSLGAGPG Trigger: GCCCGGGCCCGCGCCTAGGCTGCGCCGCGCTCCGCAACGTGTCTGGCGCGCAGTACGTGGGCTCAGGCTACA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS GCA 72 bp | CACGCAGCTGCCCAGATCGTGGCCGCTGAAGTCCACTaGTTTAAGCGCCACCGCGGCGCCGCCGGGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: HAAAQIVAAEVH*FKRHRGAAGQA Trigger: CGCCTGCCCGGCGGCGCCGCGGTGGCGCTTAAAGCAGTGGACTTCAGCGGCCACGATCTGGGCAGCTGCGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS CCA 72 bp | CGCGCCCCGAACTCGCGCACGCAGCTGCCCAGATCGTaGCCGCTGAAGTCCACTGCTTTAAGCGCCACCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RAPNSRTQLPRS*PLKSTALSATA Trigger: CGCGGTGGCGCTTAAAGCAGTGGACTTCAGCGGCCACGATCTGGGCAGCTGCGTGCGCGAGTTCGGGGCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS TCA 72 bp | TGCCCTCGCACCAGCCCTGGGCCGAGCAGGGCAGGCTaGAGTTCCTGGCTGGAAACTCTAGCGTGCAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CPRTSPGPSRAG*SSWLETLACSR Trigger: CCGACTGCACGCTAGAGTTTCCAGCCAGGAACTTCAGCCTGCCCTGCTCGGCCCAGGGCTGGTGCGAGGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS TCA 72 bp | GGGCAGGCGGACCCGGTACACAGCCTTAGTGTAGCCTaGGCCCACGTACTGCGCGCCAGACACGTTGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GQADPVHSLSVA*AHVLRARHVAE Trigger: CTCCGCAACGTGTCTGGCGCGCAGTACGTGGGCTCAGGCTACACTAAGGCTGTGTACCGGGTCCGCCTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS TCA 72 bp | GGGAGTGGGCCAGGTGGTGGAGGAGGCGGCCAAGGCTaGGGCAGATTCGGAATCGATCCTCCCAGGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSGPGGGGGGQG*GRFGIDPPRKS Trigger: AGACTTCCTGGGAGGATCGATTCCGAATCTGCCTCAGCCTTGGCCGCCTCCTCCACCACCTGGCCCACTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS GCA 72 bp | TGGCTGGAAACTCTAGCGTGCAGTCGGCACTGCTGGTaGACGGTGTCTCTTCCACGCGGGCATCATCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WLETLACSRHCW*TVSLPRGHHPG Trigger: ACCTGGATGATGCCCGCGTGGAAGAGACACCGTGCACCAGCAGTGCCGACTGCACGCTAGAGTTTCCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS GCA 72 bp | ACCTGTAGGCATTGTAGAGGTTCCGTTTCTCATTCATaGCCTCGCACCAGCCCTGGGCCGAGCAGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TCRHCRGSVSHS*PRTSPGPSRAG Trigger: GCCTGCCCTGCTCGGCCCAGGGCTGGTGCGAGGGCATGAATGAGAAACGGAACCTCTACAATGCCTACAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS GCA 72 bp | TCTGTCACTTTCAGCTCCCCGTTCACTAGCACAAACTaGCGAGGGCGGAAGTCAAGCAGGGTGACCGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVTFSSPFTSTN*RGRKSSRVTEP Trigger: GGGCTCGGTCACCCTGCTTGACTTCCGCCCTCGGCAGTTTGTGCTAGTGAACGGGGAGCTGAAAGTGACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||
| CDS TCA 72 bp | AGACCAGCTTCCGACCTGTCCAGGTGGTCTGGTTGGTaGCCACAAAGGCACGACACTGAGCATGGCTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RPASDLSRWSGW*PQRHDTEHGSH Trigger: GTGAGAGCCATGCTCAGTGTCGTGCCTTTGTGGTCACCAACCAGACCACCTGGACAGGTCGGAAGCTGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS TCA 72 bp | GGAGGGAAGGCGGGGCACTGTGTGGCAGGAGGTATGTaGAGAAGAACCTGTAGGCATTGTAGAGGTTCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGKAGHCVAGGM*RRTCRHCRGSV Trigger: AACGGAACCTCTACAATGCCTACAGGTTCTTCTTCACATACCTCCTGCCACACAGTGCCCCGCCTTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS GCA 72 bp | TACTCAGCCCTGCTGCTTGTAGAGTTCTGCAGGTACTaGCCACTTCGGAACAAGTGTAGCGCTGTCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: YSALLLVEFCRY*PLRNKCSAVSS Trigger: GCTGGAGACAGCGCTACACTTGTTCCGAAGTGGGCAGTACCTGCAGAACTCTACAAGCAGCAGGGCTGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS GCA 72 bp | ATGCGCTGGTACTCAGCCCTGCTGCTTGTAGAGTTCTaGAGGTACTGCCCACTTCGGAACAAGTGTAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: MRWYSALLLVEF*RYCPLRNKCSA Trigger: AGCGCTACACTTGTTCCGAAGTGGGCAGTACCTGCAGAACTCTACAAGCAGCAGGGCTGAGTACCAGCGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170758.2 ENSMUST00000170794.8 |
||
| CDS CCA 72 bp | ATTCGGAATCGATCCTCCCAGGAAGTCTGCAACAGCTaGATCATCTCCACAGGGGCACCCAGCTCTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: IRNRSSQEVCNS*IISTGAPSSVM Trigger: CATCACAGAGCTGGGTGCCCCTGTGGAGATGATCCAGCTGTTGCAGACTTCCTGGGAGGATCGATTCCGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170794.8 |
||